HHsearch alignment for GI: 255764482 and conserved domain: pfam01861
>pfam01861 DUF43 Protein of unknown function DUF43. This family includes archaebacterial proteins of unknown function. All the members are 350-400 amino acids long.
Probab=98.03 E-value=0.00015 Score=44.94 Aligned_cols=110 Identities=14% Similarity=0.170 Sum_probs=81.2
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 99855789995878438999999867998899998898999988999998066452225302004442353100001235
Q gi|255764482|r 8 NATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNLAGLK 87 (225)
Q Consensus 8 ~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 87 (225)
T Consensus 41 gdL~Gk~iL~vGDD-DLtSlA~al~~~p~~I~VvDIDeRll~fI~~~A~~~gl-----~i~~~~~DlR~pLP~-----~l 109 (243)
T pfam01861 41 GDLEGKEILVLGDD-DLTSLAAALTGLPKRIAVVDIDERLIKFIERVAKEEGL-----KIEAFVHDLRNPLPE-----DL 109 (243)
T ss_pred CCCCCCEEEEECCC-CHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CEEEEEECCCCCCCH-----HH
T ss_conf 88579879997286-18789999648985489996758999999999997499-----716887410148999-----99
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCC---EEEEECCH
Q ss_conf 7652057722654464465478854556520566898999999998624698---37870288
Q gi|255764482|r 88 NNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSG---QLSLIARP 147 (225)
Q Consensus 88 ~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG---~~~~i~~~ 147 (225)
T Consensus 110 ~~~FD~f~TDPPyT~~-------------------G~~LFlsRgi~~Lk~eg~agYfglt~~e 153 (243)
T pfam01861 110 KHKFDVFITDPPETVD-------------------GLKAFLGRGIATLKGEGCAGYFGITHRE 153 (243)
T ss_pred HCCCCEEECCCCCCHH-------------------HHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 6167989718998778-------------------9999999999982668852268764260