HHsearch alignment for GI: 255764482 and conserved domain: pfam11599

>pfam11599 AviRa RRNA methyltransferase AviRa. This family of proteins represents the methyltransferase AviRa from Streptomyces viridochromogenes. This protein mediates the resistance to the antibiotic avilamycin. AviRa methylates a specific guanine base within the peptidyl-transferase loop of the 23S ribosomal RNA.
Probab=98.03  E-value=3.2e-05  Score=48.63  Aligned_cols=126  Identities=15%  Similarity=0.096  Sum_probs=79.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHH--HCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCC--------------------
Q ss_conf             8557899958784389999998--679988999988989999889999980664522253--------------------
Q gi|255764482|r   10 TGSFHLADLGAGAGAAGLAVAS--RLHEAQILLAERSPLMAHYARKTLALPANAQISKRI--------------------   67 (225)
Q Consensus        10 ~~~~~VLDlGcG~G~~~l~la~--r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~--------------------   67 (225)
T Consensus        50 ~~p~tlwDpCCG~gYlLTvlgLLhr~~i~~v~aSDVd~~al~LA~~NL~LLt~~GL~~R~~eL~e~~~~f~k~s~~~aa~  129 (249)
T pfam11599        50 DAEISLWDCCCGGAYLLSILGLLHRNSIANLIASDIDPAPIELAADNLALLSKAGINAREDELKALSERFGKASHIDAAH  129 (249)
T ss_pred             CCCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             88730330577711899999985315787777425887899999864544032016778999999999848825788998


Q ss_pred             ------------------EEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHH
Q ss_conf             ------------------02004442353100001235765205772265446446547885455652056689899999
Q gi|255764482|r   68 ------------------SLIEVDVTLVGENRNLAGLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIR  129 (225)
Q Consensus        68 ------------------~~~~~D~~~~~~~~~~~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~  129 (225)
T Consensus       130 aA~Rl~~~l~a~gg~~p~~~~~ADvfdp~~l~~~--~~g~~pDiVvTDlPYGe~t~Weg~---------~~~~~v~g~l~  198 (249)
T pfam11599       130 AADRIEELLTAEGGALPCAIKTADLFDGNALEAC--DAGFAPDIIITDLPYGEMTEWEEQ---------VGAGGIAGLLN  198 (249)
T ss_pred             HHHHHHHHHHCCCCCCCCHHHEECCCCCCHHHHH--HCCCCCCEEEECCCCCCEEEECCC---------CCCCCHHHHHH
T ss_conf             8899999986038998612100023586036777--437888868843787740022377---------89976789999


Q ss_pred             HHHHHCCCCCEEEEECC
Q ss_conf             99986246983787028
Q gi|255764482|r  130 TACAIMRSSGQLSLIAR  146 (225)
Q Consensus       130 ~a~~lLkpgG~~~~i~~  146 (225)
T Consensus       199 ~l~~vlp~~aVv~V~~~  215 (249)
T pfam11599       199 ALAAACGADAIIAVCMD  215 (249)
T ss_pred             HHHHHCCCCEEEEEEEC
T ss_conf             99865799808999816