RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|255764484|ref|YP_003065144.2| hypothetical protein CLIBASIA_03090 [Candidatus Liberibacter asiaticus str. psy62] (43 letters) >gnl|CDD|32929 COG3115, ZipA, Cell division protein [Cell division and chromosome partitioning]. Length = 324 Score = 28.5 bits (63), Expect = 0.38 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%) Query: 1 MQRLIEILLL-SSFAVIAIIF--LWADIREKSISAFFRDIP 38 MQ L IL++ + A+IA++ LW +E+S ++FRD P Sbjct: 1 MQDLRLILIIVGAIAIIALLVHGLWTSRKERS--SYFRDRP 39 >gnl|CDD|176995 CHL00054, psaB, photosystem I P700 chlorophyll a apoprotein A2. Length = 734 Score = 24.3 bits (53), Expect = 6.9 Identities = 10/21 (47%), Positives = 14/21 (66%) Query: 2 QRLIEILLLSSFAVIAIIFLW 22 +RL + + S F +AIIFLW Sbjct: 40 ERLYQKIFASHFGQLAIIFLW 60 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.338 0.148 0.417 Gapped Lambda K H 0.267 0.0789 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 523,182 Number of extensions: 16862 Number of successful extensions: 129 Number of sequences better than 10.0: 1 Number of HSP's gapped: 129 Number of HSP's successfully gapped: 11 Length of query: 43 Length of database: 6,263,737 Length adjustment: 17 Effective length of query: 26 Effective length of database: 5,896,384 Effective search space: 153305984 Effective search space used: 153305984 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.8 bits) S2: 51 (23.3 bits)