HHsearch alignment for GI: 255764485 and conserved domain: TIGR02522

>TIGR02522 pilus_cpaD pilus (Caulobacter type) biogenesis lipoprotein CpaD; InterPro: IPR013361 Proteins in this entry consist of a pilus biogenesis protein, CpaD, from Caulobacter, and homologues in other bacteria, including three in the root nodule bacterium Bradyrhizobium japonicum. The molecular function of the homologues is not known..
Probab=100.00  E-value=0  Score=414.13  Aligned_cols=200  Identities=36%  Similarity=0.600  Sum_probs=184.5

Q ss_pred             HHHHHHHHHHHHCCC--EEEECCCCCHHHCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             999999999960220--011027887111385777337726988515667688988889999999999741887299992
Q gi|255764485|r   44 LGQLFFLLLFYGTSA--LAYYDEGSDYRDRYPILMRKVEQIVDIPLLAGRGEIKYPIHDTIRGFLEKYKNDSASVLFLLI  121 (243)
Q Consensus        44 ~~~~~~~~~~~~~~~--~~~~~~~~DYR~RHPIvi~Ea~~tlDIpVg~g~g~Lt~~qr~~V~gFa~~yrr~G~G~i~I~v  121 (243)
T Consensus         4 ~~a~~~~LagC~~~~P~~~~~~~p~d~~~~~PI~v~~~~~~~~l~v~~~~~Gl~a~~~~~l~~~l~~~~~~~~~~l~~~~   83 (211)
T TIGR02522         4 LLALTALLAGCASTDPEIDVGALPDDYRQRHPIAVQEESKSIDLLVAPGDRGLSASQQDQLLGFLKDWSRASAQTLVVVI   83 (211)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             98899997530588875553432345345887355117701345544888767988899999999998630585378975


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHCCCCCC-----C
Q ss_conf             49898878999999999999997598823406610368885436846677544454178889981331467557-----8
Q gi|255764485|r  122 PSPTVSSASIRRAVKDIRKIIISSGIPVSSISERIYDADYGMDVDTIRLSYFASKPSAGKCGFWPEDMLGNAKG-----N  196 (243)
Q Consensus       122 PsGS~Na~AA~~~~~eIR~~L~~~GVp~~~I~v~~Y~a~~p~~aAPIRLSY~ri~A~ag~CG~WPeDL~~s~~~-----N  196 (243)
T Consensus        84 p~GSaN~~aa~~~~~e~~~~l~~~Gv~a~~iV~~~~~~~~~~~~g~iRv~~~~~~A~t~~Cg~~~e~l~~~~~~~GyneN  163 (211)
T TIGR02522        84 PSGSANEAAAEAMAAEIRRVLAASGVGARNIVKVVYRAEASGDEGPIRVSYVAIEAQTTKCGSWPEDLLLETLEDGYNEN  163 (211)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCC
T ss_conf             88875468899999999999996599720417744557887766655799999887668888885454035678762245


Q ss_pred             CCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             86233362568878986269688506888884436678889987519
Q gi|255764485|r  197 RNWTNYGCAYQNNLAAQVVNPLDLFSPRMVTPPDAEQRDKSIQRYRQ  243 (243)
Q Consensus       197 k~y~NFGCAtQ~NLAAqVaNP~DLv~PR~~tP~Da~RR~~viekYR~  243 (243)
T Consensus       164 ~~Y~~~GCa~q~NLAa~ianP~DL~~pR~~~p~D~~~r~~~~~~YR~  210 (211)
T TIGR02522       164 EAYQNLGCATQNNLAAQIANPRDLLGPRAMTPADGERRDIVIDRYRK  210 (211)
T ss_pred             CCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHCCCCCCCCCC
T ss_conf             44455013678889984038433312667785365452760112358