HHSEARCH alignment of GI: 255764485 and SCOP domain: d2aizp1

Alignment

Probab=94.03  E-value=0.16  Score=27.76  Aligned_cols=84  Identities=8%  Similarity=0.080  Sum_probs=64.5

Q ss_pred             EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC-----CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf             269885156676889888899999999997418872999924-----989887899999999999999759882340661
Q gi|255764485|r   81 QIVDIPLLAGRGEIKYPIHDTIRGFLEKYKNDSASVLFLLIP-----SPTVSSASIRRAVKDIRKIIISSGIPVSSISER  155 (243)
Q Consensus        81 ~tlDIpVg~g~g~Lt~~qr~~V~gFa~~yrr~G~G~i~I~vP-----sGS~Na~AA~~~~~eIR~~L~~~GVp~~~I~v~  155 (243)
                      +...|++..+.-.|++.++..+..+++.-.....-.|.|.-=     +...|-.....=+..|+..|...||++..|.+.
T Consensus        28 ~~~~I~F~~~s~~L~~~~~~~L~~la~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~~V~~~L~~~Gi~~~ri~~~  107 (134)
T d2aizp1          28 RYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTV  107 (134)
T ss_dssp             TSCEEECCTTCCCCCHHHHHHHHHHHHHHHHSTTCCEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf             67818837998124988999999999999869996899960434332211101378999999998997718753455137


Q ss_pred             CCCCCCCCC
Q ss_conf             036888543
Q gi|255764485|r  156 IYDADYGMD  164 (243)
Q Consensus       156 ~Y~a~~p~~  164 (243)
                      .|-.+.|..
T Consensus       108 g~G~~~P~~  116 (134)
T d2aizp1         108 SYGEEKPAV  116 (134)
T ss_dssp             ECTTTSCSS
T ss_pred             ECCCCCCCC
T ss_conf             754337578

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: OmpA-like
family: OmpA-like
domain: Peptidoglycan-associated lipoprotein, PAL, periplasmic domain
species: Haemophilus influenzae [TaxId: 727]