HHsearch alignment for GI: 255764486 and conserved domain: COG4171
>COG4171 SapC ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].
Probab=98.23 E-value=0.00024 Score=45.61 Aligned_cols=198 Identities=15% Similarity=0.222 Sum_probs=135.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 749999999999999999999999999999986330557-8999999999875448999999999999998753221001
Q gi|255764486|r 252 GLIPLLIGTFYIGFIAMLFSVPIGLLIAIYMAEYAPKKL-RAVIKPITEMLVGIPTIVYGFFALSLVGPFLRDISIYMNG 330 (493)
Q Consensus 252 Gi~p~i~GTl~i~~iA~lia~Pigl~~Aiyl~eya~~~~-~~~~~~~iellagiPSVVyG~f~~~~l~p~~~~~~~~~~~ 330 (493)
T Consensus 94 Gt~~t~G~allvt~~a~l~g~~lGi~AG~t------~gl~s~~lnHilDt~lSiPsLLlAiivvaf~------------- 154 (296)
T COG4171 94 GTAPTVGGALLVTLAATICGGVLGIFAGAT------HGLRSAVLNHILDTLLSIPSLLLAIIVVAFA------------- 154 (296)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------
T ss_conf 675234139999999999999999999777------7789999999999997358999999999960-------------
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32342103557530179999999988776899999998-62129999887660885689999999983033699999999
Q gi|255764486|r 331 LITGNYKSFIEAQSVLTAGLVMGIMLIPYVSSLSEDVI-SSIPRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAILMT 409 (493)
Q Consensus 331 ~~~~~~~~~~~~~s~l~a~l~l~imilP~i~~~~~~al-~~vp~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~iL~ 409 (493)
T Consensus 155 -----------gpsl~namfA~~LAllPrfirsiY~avh~EleKeYViaarLdGas~~~lL~~~IlPNI~~~~v~EitrA 223 (296)
T COG4171 155 -----------GPSLSNAMFAVWLALLPRFIRSIYSAVHDELEKEYVIAARLDGASTLNLLWFAILPNITAILVTEITRA 223 (296)
T ss_pred -----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf -----------832888999999999999999999999999887787776526766188999997251279999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998759999999412225786704671127999999850223457545899999---999999999999999999999
Q gi|255764486|r 410 ASRTIGETMIVVLAAGVAARLQFNPFESMTTITVKIMNQLTGDLDFSSPQTLVAFA---LGLTLFCITFFLNIYAMYIMK 486 (493)
Q Consensus 410 ~~RaiGETm~v~m~~G~~~~~~~~~~~~~~tlt~~I~~~~~g~~~~~~~~~~~~fa---~gl~L~~~tl~~N~~a~~i~~ 486 (493)
T Consensus 224 lsiAiLDI~ALgFl-~LGAQ~Ps-----------pEWGAMlgDs--leLiY~APWTV~LPG~AI~~tvllvnl~gdG~r~ 289 (296)
T COG4171 224 LSIAILDIAALGFL-DLGAQLPS-----------PEWGAMLGDS--LELIYVAPWTVMLPGAAIMFTVLLVNLLGDGLRR 289 (296)
T ss_pred HHHHHHHHHHHHHH-HCCCCCCC-----------CHHHHHHCCC--CCEEEECCEEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988886133-12577999-----------4677774261--0326654511142647999999999996157999
Q ss_pred HHHHHCC
Q ss_conf 9754229
Q gi|255764486|r 487 KYQRKYE 493 (493)
Q Consensus 487 r~r~~y~ 493 (493)
T Consensus 290 AinagvE 296 (296)
T COG4171 290 AINAGVE 296 (296)
T ss_pred HHHHCCC
T ss_conf 9970279