HHsearch alignment for GI: 255764486 and conserved domain: PRK10952
>PRK10952 glycine betaine transporter membrane protein; Provisional.
Probab=99.74 E-value=4.3e-15 Score=114.29 Aligned_cols=197 Identities=20% Similarity=0.330 Sum_probs=142.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66774999999999999999999999999999998633055789999999998754489999999999999987532210
Q gi|255764486|r 249 GQFGLIPLLIGTFYIGFIAMLFSVPIGLLIAIYMAEYAPKKLRAVIKPITEMLVGIPTIVYGFFALSLVGPFLRDISIYM 328 (493)
Q Consensus 249 ~~~Gi~p~i~GTl~i~~iA~lia~Pigl~~Aiyl~eya~~~~~~~~~~~iellagiPSVVyG~f~~~~l~p~~~~~~~~~ 328 (493)
T Consensus 137 ~~~G~W~~aM~TLalvlvav~~~~iiGiplGI~~ar--s~r~~~il~PiLD~mQT~P~FVYLiP~vmlF----------- 203 (354)
T PRK10952 137 GAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLAR--SPRAAKIIRPLLDAMQTTPAFVYLVPIVMLF----------- 203 (354)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-----------
T ss_conf 996632999999999999999999999999999974--6999999999998731130799999999992-----------
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01323421035575301799999999887768999999986212999988766088568999999998303369999999
Q gi|255764486|r 329 NGLITGNYKSFIEAQSVLTAGLVMGIMLIPYVSSLSEDVISSIPRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAILM 408 (493)
Q Consensus 329 ~~~~~~~~~~~~~~~s~l~a~l~l~imilP~i~~~~~~al~~vp~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~iL 408 (493)
T Consensus 204 -------------GiG~vpaviAtviyAlpP~iR~T~lGir~Vp~~viEAa~~~G~T~~Q~L~kVeLPlA~P~ImaGvNQ 270 (354)
T PRK10952 204 -------------GIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQ 270 (354)
T ss_pred -------------CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf -------------7971459999999973589999999996088889999998499988898983360249999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999875999999941222578670467112799999985022345754589999999999999999999999999997
Q gi|255764486|r 409 TASRTIGETMIVVLAAGVAARLQFNPFESMTTITVKIMNQLTGDLDFSSPQTLVAFALGLTLFCITFFLNIYAMYIMKKY 488 (493)
Q Consensus 409 ~~~RaiGETm~v~m~~G~~~~~~~~~~~~~~tlt~~I~~~~~g~~~~~~~~~~~~fa~gl~L~~~tl~~N~~a~~i~~r~ 488 (493)
T Consensus 271 timlaLsMvVIAa~I-G-agG-----------LG~~Vl~gi-~~~d~-----G~gl~aGl~IVlLAIiLDRiTqa~g~~~ 331 (354)
T PRK10952 271 TLMLALSMVVIASMI-A-VGG-----------LGQMVLRGI-GRLDM-----GLATVGGVGIVILAIILDRLTQAVGRDS 331 (354)
T ss_pred HHHHHHHHHHHHHHH-C-CCC-----------CHHHHHHHH-HHCCH-----HHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999999999999995-7-886-----------618999998-62243-----6899999999999999999889856200
Q ss_pred HH
Q ss_conf 54
Q gi|255764486|r 489 QR 490 (493)
Q Consensus 489 r~ 490 (493)
T Consensus 332 r~ 333 (354)
T PRK10952 332 RS 333 (354)
T ss_pred CC
T ss_conf 02