HHsearch alignment for GI: 255764486 and conserved domain: TIGR03416
>TIGR03416 ABC_choXWV_perm choline ABC transporter, permease protein.
Probab=99.77 E-value=9.6e-16 Score=118.45 Aligned_cols=147 Identities=26% Similarity=0.340 Sum_probs=123.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77499999999999999999999999999999863305578999999999875448999999999999998753221001
Q gi|255764486|r 251 FGLIPLLIGTFYIGFIAMLFSVPIGLLIAIYMAEYAPKKLRAVIKPITEMLVGIPTIVYGFFALSLVGPFLRDISIYMNG 330 (493)
Q Consensus 251 ~Gi~p~i~GTl~i~~iA~lia~Pigl~~Aiyl~eya~~~~~~~~~~~iellagiPSVVyG~f~~~~l~p~~~~~~~~~~~ 330 (493)
T Consensus 82 ~G~W~~am~Tlalv~~av~la~~iGiPlGI~~~~--s~~~~~~l~pild~mQTiP~fvyLip~i~lf------------- 146 (267)
T TIGR03416 82 QGYWEETVETLALVLSATVVCMVIGVPLGIAAAH--RPWLYAIMRPVLDLMQTLPTFVYLIPALVLF------------- 146 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-------------
T ss_conf 7158999999999999999999999999999981--6999999999998743154679999999994-------------
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32342103557530179999999988776899999998621299998876608856899999999830336999999999
Q gi|255764486|r 331 LITGNYKSFIEAQSVLTAGLVMGIMLIPYVSSLSEDVISSIPRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAILMTA 410 (493)
Q Consensus 331 ~~~~~~~~~~~~~s~l~a~l~l~imilP~i~~~~~~al~~vp~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~iL~~ 410 (493)
T Consensus 147 -----------GiG~~~aiia~~iya~~P~ir~T~~Gir~V~~~~iEaa~~~G~s~~q~l~~V~lPlA~P~Il~G~nq~i 215 (267)
T TIGR03416 147 -----------GLGMVPGLISTVIFAIPAPIRLTHLGISSVPQELVEAGEAFGATPSQLLWKVELPYAMPQIMAGLTQTI 215 (267)
T ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf -----------887056999999999889999999999856768999999839989889799418415899999999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9998759999999
Q gi|255764486|r 411 SRTIGETMIVVLA 423 (493)
Q Consensus 411 ~RaiGETm~v~m~ 423 (493)
T Consensus 216 ~~al~mvviaa~I 228 (267)
T TIGR03416 216 MLSLSMVVIAALV 228 (267)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999996