HHSEARCH alignment of GI: 255764486 and SCOP domain: d2r6gf2

Alignment
>d2r6gf2 f.58.1.1 (F:261-504) Maltose transport system permease protein MalF {Escherichia coli [TaxId: 562]}
Probab=99.87  E-value=2.1e-20  Score=145.25  Aligned_cols=224  Identities=13%  Similarity=0.161  Sum_probs=168.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             74999999999999999999999999999998633055789999999998754489999999999999987532210013
Q gi|255764486|r  252 GLIPLLIGTFYIGFIAMLFSVPIGLLIAIYMAEYAPKKLRAVIKPITEMLVGIPTIVYGFFALSLVGPFLRDISIYMNGL  331 (493)
Q Consensus       252 Gi~p~i~GTl~i~~iA~lia~Pigl~~Aiyl~eya~~~~~~~~~~~iellagiPSVVyG~f~~~~l~p~~~~~~~~~~~~  331 (493)
                      ..+..+..|+..+.+++++++++|+..|..++.+ +.|.|+..+..+-+..-+|+++.|+.-...+.|-...........
T Consensus        16 ~~~~~l~~t~~~~~~~~~~~~~~~~~lA~~l~~~-~~~~~~~~~~~~~~p~~ip~~v~~~~~~~~~~~~~g~~~~~l~~~   94 (244)
T d2r6gf2          16 PFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWE-ALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSAL   94 (244)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS-SSTTHHHHHHHTTHHHHSCHHHHHHHHHHHTCSSSSHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             9999999999999999999999999999999847-420478999999999984088999999998752355146666553


Q ss_pred             HHHHHCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2342103--55753017999999998877689999999862129999887660885689999999983033699999999
Q gi|255764486|r  332 ITGNYKS--FIEAQSVLTAGLVMGIMLIPYVSSLSEDVISSIPRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAILMT  409 (493)
Q Consensus       332 ~~~~~~~--~~~~~s~l~a~l~l~imilP~i~~~~~~al~~vp~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~iL~  409 (493)
                       .+....  .....+.....++....-+|+.......+++++|+++.|||.-+||++||+.+||++|..+|++..+.++.
T Consensus        95 -~~~~~~~~~~~~~~~~~i~i~~v~~~~p~~~l~~~~~l~~I~~~l~EAA~idGAs~~~~f~~I~lPl~~p~i~~~~il~  173 (244)
T d2r6gf2          95 -FGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIAS  173 (244)
T ss_dssp             -SSCCCCTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCTHHHHHHHHTCCCSHHHHHHTTGGGTHHHHHHHHHHH
T ss_pred             -CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHH
T ss_conf             -0267741012779999999999997102779999999975999998999974997657749998544689999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCC--CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999987599999994122257--8670467112799999985022345754589999999999999999999
Q gi|255764486|r  410 ASRTIGETMIVVLAAGVAARL--QFNPFESMTTITVKIMNQLTGDLDFSSPQTLVAFALGLTLFCITFFLNI  479 (493)
Q Consensus       410 ~~RaiGETm~v~m~~G~~~~~--~~~~~~~~~tlt~~I~~~~~g~~~~~~~~~~~~fa~gl~L~~~tl~~N~  479 (493)
                      +-++.+|-..+.+..|+.+..  ...+-....++..+++.....  ..+..++..+-|.+.+++++++++.+
T Consensus       174 fi~~~~~f~~~~~l~~ggp~~~~~~~~~~~~~~~~~~~y~~~~~--~~~~~~~g~aaA~avil~viv~~l~l  243 (244)
T d2r6gf2         174 FAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFE--GGGGQDFGLAAAIATLIFLLVGALAI  243 (244)
T ss_dssp             HHHHHTCHHHHHHHCSSCSBCSSCSSCCBSSCCHHHHHHHHHTS--SSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99972005676442588887555666304999999999999986--25325299999999999999999997


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Maltose transport system permease protein MalF
species: Escherichia coli [TaxId: 562]