HHSEARCH alignment of GI: 255764486 and SCOP domain: d3dhwa1

Alignment
>d3dhwa1 f.58.1.1 (A:6-208) D-methionine transport system permease protein MetI {Escherichia coli [TaxId: 562]}
Probab=99.84  E-value=8.3e-20  Score=141.49  Aligned_cols=192  Identities=19%  Similarity=0.324  Sum_probs=145.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             499999999999999999999999999999863------30557899999999987544899999999999999875322
Q gi|255764486|r  253 LIPLLIGTFYIGFIAMLFSVPIGLLIAIYMAEY------APKKLRAVIKPITEMLVGIPTIVYGFFALSLVGPFLRDISI  326 (493)
Q Consensus       253 i~p~i~GTl~i~~iA~lia~Pigl~~Aiyl~ey------a~~~~~~~~~~~iellagiPSVVyG~f~~~~l~p~~~~~~~  326 (493)
                      +++.++.|+.+++.++.+++.+|+..|+.++.+      .++++.+...+..+.+.++|.++..++.....    +..  
T Consensus         4 ll~~~~~tl~is~~~~~i~~ilg~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~~~~~~~~----~~~--   77 (203)
T d3dhwa1           4 LVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFT----RVI--   77 (203)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTGGGGGGGGGGTTCSSSCCSSHHHHHHHHHHHHHHSCHHHHHHHHHHHH----HHT--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH--
T ss_conf             99999999999999999999999999999999874443200899999999999999999999999999863----554--


Q ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             10013234210355753017999999998877689999999862129999887660885689999999983033699999
Q gi|255764486|r  327 YMNGLITGNYKSFIEAQSVLTAGLVMGIMLIPYVSSLSEDVISSIPRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAI  406 (493)
Q Consensus       327 ~~~~~~~~~~~~~~~~~s~l~a~l~l~imilP~i~~~~~~al~~vp~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~  406 (493)
                                  ...+.+..++.+++.+...|++....+++++++|++++|++.++|++|||+++||++|.++|+++++.
T Consensus        78 ------------~~~~~~~~~~i~~~~~~~~p~~~~~~~~~l~~i~~~~~Eaa~~lGas~~q~~~~vilP~~~p~i~~~~  145 (203)
T d3dhwa1          78 ------------VGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAA  145 (203)
T ss_dssp             ------------TCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTTTHHHHHTCCTHHHHHHTTHHHHHHHHHHHH
T ss_pred             ------------HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             ------------04541199999999998648999999988884362068999886994442418840997699999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999998759999999412225786704671127999999850223457545899999999999999999999
Q gi|255764486|r  407 LMTASRTIGETMIVVLAAGVAARLQFNPFESMTTITVKIMNQLTGDLDFSSPQTLVAFALGLTLFCITFFLNIY  480 (493)
Q Consensus       407 iL~~~RaiGETm~v~m~~G~~~~~~~~~~~~~~tlt~~I~~~~~g~~~~~~~~~~~~fa~gl~L~~~tl~~N~~  480 (493)
                      ++.+.++++|+....+..++             .+...+...  +...++.   ...++..++++++..++|.+
T Consensus       146 ~~~~~~~i~~~~~~~~ig~~-------------~~~~~~~~~--~~~~~~~---~~~~~~~~~~~i~v~li~~~  201 (203)
T d3dhwa1         146 TITLITLVGYSAMGGAVGAG-------------GLGQIGYQY--GYIGYNA---TVMNTVLVLLVILVYLIQFA  201 (203)
T ss_dssp             HHHHHHHHHHHHHCCSTTCC-------------HHHHHHHHH--HHSSCCT---THHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHH--HHHHCCH---HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999775-------------999999999--9874028---99999999999999999994


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: D-methionine transport system permease protein MetI
species: Escherichia coli [TaxId: 562]