HHsearch alignment for GI: 255764487 and conserved domain: cd00446
>cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent.
Probab=100.00 E-value=2.8e-42 Score=290.80 Aligned_cols=137 Identities=47% Similarity=0.852 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999999988999999999999999996424334320315789999997212223321011127899876447999
Q gi|255764487|r 40 SEEFRDKYLRVIAEMENLRRRTDREKKDAQSYSIAKFARDMLSVSDNLSRALDSAPLDLANSEKKSESVLKSLIEGIEMT 119 (219)
Q Consensus 40 ~~elkdk~lR~~AE~eN~rkR~~ke~~~~~~~a~~~~~~~lL~v~D~lerAl~~~~~~~~~~~~~~~~~~~~~~~Gi~mi 119 (219)
T Consensus 1 ~~~~~d~~~r~~Ae~~N~rkr~~~e~~~~~~~~~~~~~~~lL~v~D~l~~al~~~~~---------~~~~~~~~~Gi~~i 71 (137)
T cd00446 1 LEELKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKK---------EEELKNLVEGVEMT 71 (137)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC---------CHHHHHHHHHHHHH
T ss_conf 967899999999869999999999999999999999999615645259999982633---------13588899999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCEEECCEEEECCEEEE
Q ss_conf 999999986411000136888757005777522434589774599997088177567820002486
Q gi|255764487|r 120 RREMMSTLERYGVKKIDAKDQKFNPNMHQAMFEEPHDTVPANTIIKVVQDGYAINERVLRPALVSI 185 (219)
Q Consensus 120 ~k~l~~~L~~~GV~~i~~~G~~FDP~~HeAi~~~~~~~~~~~tVi~v~q~GY~l~~rvlRpA~V~V 185 (219)
T Consensus 72 ~~~l~~~L~~~gi~~i~~~g~~FDP~~HeAv~~~~~~~~~~~~I~~v~~~GY~l~~rvlRpA~V~V 137 (137)
T cd00446 72 LKQLLDVLEKHGVEKIEPEGEPFDPNLHEAVMQVPSPDVEPGTVVEVLQKGYKLGDRVLRPAMVVV 137 (137)
T ss_pred HHHHHHHHHHCCCEEECCCCCCCCHHHHHEEEEECCCCCCCCEEEEEEECCCEECCEEEECCEEEC
T ss_conf 999999999869952245699689467104356368999939899996569386999710637469