HHSEARCH alignment of GI: 255764487 and SCOP domain: d1dkga1

Alignment

Probab=99.79  E-value=1.8e-20  Score=148.51  Aligned_cols=59  Identities=32%  Similarity=0.611  Sum_probs=56.9

Q ss_pred             HCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCEEECCEEEECCEEEEECCCC
Q ss_conf             00013688875700577752243458977459999708817756782000248604888
Q gi|255764487|r  132 VKKIDAKDQKFNPNMHQAMFEEPHDTVPANTIIKVVQDGYAINERVLRPALVSISKGKT  190 (219)
Q Consensus       132 V~~i~~~G~~FDP~~HeAi~~~~~~~~~~~tVi~v~q~GY~l~~rvlRpA~V~Vsk~~~  190 (219)
                      |+.|+++|++|||++||||+++++++.++|||++|+|+||+|+|||||||+|+|||+|+
T Consensus         1 ve~i~~~g~~FDP~~HeAv~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V~k~~s   59 (59)
T d1dkga1           1 VEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA   59 (59)
T ss_dssp             EEEECCCSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEETTEEEECEEEEEEECCC
T ss_pred             CCEECCCCCCCCHHHCEEEEEECCCCCCCCEEEEEEECCCEECCEEEECCEEEEECCCC
T ss_conf             92507789988977910705865799998989999807949899993164899945899

SCOP domain information

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]