255764488

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 218/270 (80%), Positives = 249/270 (92%)

Query: 21  MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
           MGGN  ILIQPFEI+IV+GAGLGGF+MAN LKVIKDSGV++LEIFGYK++ ++ YCD+LK
Sbjct: 1   MGGNLSILIQPFEIIIVSGAGLGGFIMANSLKVIKDSGVAILEIFGYKSIEKEIYCDILK 60

Query: 81  LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
           ++Y+LMY+LKK SR E ENHIDDP+NS+IFTSIPT+L NNELTTFICDY RM+I+GNA+S
Sbjct: 61  IMYVLMYSLKKISRTELENHIDDPHNSSIFTSIPTILSNNELTTFICDYFRMVIIGNAQS 120

Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
           +EIE LMDEEI+IILYEKLKPYHAIS+MGES PAIGIVGAILGIIKAMGNLSQSPKILG 
Sbjct: 121 HEIETLMDEEIEIILYEKLKPYHAISNMGESFPAIGIVGAILGIIKAMGNLSQSPKILGV 180

Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
           AIG SLTGT+LGI+LSY +CNPLTSQI S RL+QHRLYIIVKK LIAYMNGAIPQVAIEY
Sbjct: 181 AIGASLTGTMLGILLSYCICNPLTSQIHSIRLRQHRLYIIVKKTLIAYMNGAIPQVAIEY 240

Query: 261 GRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
           GRKVLPL ERPSIEIV QEVL+Y+++KK S
Sbjct: 241 GRKVLPLFERPSIEIVEQEVLRYSNHKKES 270

Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/290 (62%), Positives = 232/290 (80%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M+ +IGL IT  CIIGG+ AMGG+  +L+QPFE++I+ GAGLGGF+MANP+KV+KDSG +
Sbjct: 1   MNIVIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANPMKVVKDSGKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F +    +  Y DVL +LY LM +L+  SRNE E HID+P  S+IF S P+VL+N 
Sbjct: 61  LGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNK 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
           ELT+FICDY+R+II+GNARS+EIE LMDEEI+ IL++KLKPYHAI+ MG+S PAIGIV A
Sbjct: 121 ELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG+IKAMG +++SP++LG  IG +L GT+LGIILSYS+CNPL SQ+K  R KQHRLYII
Sbjct: 181 VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
           VK+ LIAYMNG++PQVA+EYGRK +   ERPSI+ V QE++      KA+
Sbjct: 241 VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA 290

Species: Agrobacterium tumefaciens
Genus: Agrobacterium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  362 bits (928), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 173/290 (59%), Positives = 222/290 (76%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M+ IIG  +T  CIIG F AMGG+   L QPFE VI+AGAG+GGF+MANP+KV+KDSG +
Sbjct: 1   MNIIIGFVVTCGCIIGSFMAMGGDVNALFQPFEFVIIAGAGIGGFIMANPMKVLKDSGKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F +    +  Y D L +LY LM +L+  SRNE E HID+P  S IF + PTVL+N 
Sbjct: 61  LGEAFRHAVPKERDYLDTLGVLYALMRDLRTKSRNEIEAHIDNPDESVIFQAAPTVLKNR 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
           +LT FICDY+R+II+GNARS+EIE LMDEEI+ I ++K+KPYHAI+ MG+S PAIGIV A
Sbjct: 121 DLTAFICDYVRLIIIGNARSHEIEALMDEEINTIQHDKMKPYHAITIMGDSFPAIGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG+IKAM ++++SP++LG  IG +L GT LGIILSYS+C PL SQIK  R KQHRLY+I
Sbjct: 181 VLGVIKAMSHINESPEVLGHLIGSALVGTFLGIILSYSVCAPLVSQIKIVRNKQHRLYVI 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
           VK+ L+AYMNG++PQVA+EYGRK +   ERPSI+ V QE++      KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISSYERPSIDAVEQEMMNPGGESKAA 290

Species: Agrobacterium tumefaciens
Genus: Agrobacterium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  361 bits (927), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 171/290 (58%), Positives = 220/290 (75%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M+ IIG  +T  C+IG F AMGG+   L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1   MNIIIGFIVTCGCVIGSFMAMGGDVNALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F +    +  Y D L +LY LM +L+  SRNE E HID+P  STIF S PTVL+N 
Sbjct: 61  LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
           ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI  MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG+IKAM +++ SP++LG  IG +L GT LGI+LSY +C+PL SQIK  R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
           VK+ L+AYMNG++PQVA+EYGRK +   ERPSI+ V QE++      KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  361 bits (926), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 171/290 (58%), Positives = 219/290 (75%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M+ IIG  +T  C+IG F AMGG+   L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1   MNIIIGFIVTCGCVIGSFMAMGGHVEALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F +    +  Y D L +LY LM +L+  SRNE E HID+P  STIF   PTVL+N 
Sbjct: 61  LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQQAPTVLKNK 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
           ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI  MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG+IKAM +++ SP++LG  IG +L GT LGI+LSY LC+PL SQIK  R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCLCSPLVSQIKVVRNKQHRLYVI 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
           VK+ L+AYMNG++PQVA+EYGRK +   ERPSI+ V QE++      KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  360 bits (924), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 171/290 (58%), Positives = 220/290 (75%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M+ IIG  +T  C+IG F AMGG+   L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1   MNIIIGFIVTCGCVIGSFMAMGGHVDALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F +    +  Y D L +LY LM +L+  SRNE E HID+P  STIF S PTVL+N 
Sbjct: 61  LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
           ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI  MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG+IKAM +++ SP++LG  IG +L GT LGI+LSY +C+PL SQIK  R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKIVRNKQHRLYVI 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
           VK+ L+AYMNG++PQVA+EYGRK +   ERPSI+ V QE++      KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  359 bits (921), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 169/290 (58%), Positives = 219/290 (75%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M+ IIG  +T  C++G F AMGG+   L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1   MNIIIGFIVTCGCVVGSFMAMGGHVEALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F +    +  Y D L +LY LM +L+  SRNE E HID+P  STIF   PTVL+N 
Sbjct: 61  LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQQAPTVLKNK 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
           ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI  MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG+IKAM +++ SP++LG  IG +L GT LGI+LSY +C+PL SQIK  R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
           VK+ L+AYMNG++PQVA+EYGRK +   ERPSI+ V QE++      KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290

Species: Rhizobium etli
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 168/290 (57%), Positives = 218/290 (75%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M+ IIG  +T  CI+G F AMGG    L QPFE +I+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1   MNIIIGFIVTCGCIVGSFMAMGGEVDALFQPFEFLIIGGAGLGSFIMANPMKVVKDSGKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F +    +  Y D L +LY LM +L+  SRNE E HID+P  STIF S PTVL+N 
Sbjct: 61  LSEAFRHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
           ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYH+I  M +S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHSIQIMSDSFPAIGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG+IKAM +++ SP++LG  IG +L GT LGI+LSY +C+PL SQIK  R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
           VK+ L+AYMNG++PQVA+EYGRK +   ERPSI+ V QE++      KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290

Species: Rhizobium leguminosarum
Genus: Rhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  356 bits (913), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 179/291 (61%), Positives = 233/291 (80%), Gaps = 1/291 (0%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M+ IIG  IT+ CI+GGF AMGG+  +LIQPFE++I+ GAGLGGFVMANP+K++KDSG +
Sbjct: 1   MNIIIGFVITVGCILGGFMAMGGHLNVLIQPFELLIIGGAGLGGFVMANPMKIVKDSGKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F +    +  Y DVL +LY LM +L+  SRNE E HID+P  S+IF + P +L+N 
Sbjct: 61  LGEAFKHAVPKERAYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQTAPNLLKNK 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
           ELT+FICDY+R+II+GNARS+EIE LMDEEI+ IL++K+KPYHAI+ MG+S PAIGIV A
Sbjct: 121 ELTSFICDYVRLIIIGNARSHEIEALMDEEINTILHDKMKPYHAITAMGDSFPAIGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG+IKAMG +++SP++LG  IG +L GT+LGI LSYS+CNPLTSQIK  R KQHRLYII
Sbjct: 181 VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIFLSYSVCNPLTSQIKIVRTKQHRLYII 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY-NHNKKAS 290
           VK+ L+AYMNG++PQVA+EYGRK +   ERPSI+ V QE++     N+KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISSYERPSIDAVEQEMMNPGGGNEKAA 291

Species: Agrobacterium vitis
Genus: Agrobacterium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  356 bits (913), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 180/290 (62%), Positives = 232/290 (80%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M+ +IGL IT  CIIGG+ AMGG+  +L+QPFE++I+ GAGLGGF+MANP+KV+KDSG +
Sbjct: 1   MNIVIGLIITFGCIIGGYMAMGGHLDVLVQPFELLIIGGAGLGGFIMANPMKVVKDSGKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F +    +  Y DVL +LY LM +L+  SRNE E HID+P  S+IF S P+VL+N 
Sbjct: 61  LGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNK 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
           ELT+FICDY+R+II+GNARS+EIE LMDEEI+ IL++KLKPYHAI+ MG+S PAIGIV A
Sbjct: 121 ELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG+IKAMG +++SP++LG  IG +L GT+LGIILSYS+CNPL SQ+K  R KQHRLYII
Sbjct: 181 VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
           VK+ LIAYMNG++PQVA+EYGRK +   ERPSI+ V QE++      KA+
Sbjct: 241 VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA 290

Species: Agrobacterium sp. H13-3
Genus: Agrobacterium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  336 bits (865), Expect = 4e-93
 Identities = 113/280 (40%), Positives = 173/280 (61%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M  IIG  + +  + GG+   GG+   LIQP E++I+ GA LG F++ NP K IK +  +
Sbjct: 1   MLIIIGYIVVLGSVFGGYLLAGGHLGALIQPAELLIIGGAALGAFIVGNPGKAIKATLKA 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L ++F      +  Y D+L LLY L+   ++      E HI++P  S IF   P +L+++
Sbjct: 61  LPKLFKGPKYKKADYMDLLALLYELLRKARQEGMMALEAHIENPEESPIFAKYPKILKDH 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
            L  FICDY+R++I GN   +EIE LMDEEI+   +E   P HA+  + ++LPA GIV A
Sbjct: 121 HLVDFICDYLRLMISGNMNPHEIEALMDEEIETHHHEAEVPAHALQKVADALPAFGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG++K MG++ Q P +LG  IG +L GT LGI+L+Y    PL ++++    +  ++Y  
Sbjct: 181 VLGVVKTMGSIDQPPAVLGALIGAALVGTFLGILLAYGFVGPLAARLEQVVEEDTKMYQC 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
           +K  L+A +NG  PQ+A+E+GRK LP +ERPS   + + V
Sbjct: 241 IKVTLLASLNGYAPQIAVEFGRKTLPSTERPSFAELEEHV 280

Length = 283

 Score =  319 bits (821), Expect = 4e-88
 Identities = 109/280 (38%), Positives = 177/280 (63%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M  IIGL + + C+ GG+   GG+   L QP E++I+ GA +G F++ANP KV+K++   
Sbjct: 1   MLKIIGLVVVLGCVFGGYLLAGGHLAALWQPAELLIIGGAAIGAFIIANPPKVLKETLKG 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L ++F     G+  Y D+L LLY L+   ++      E+HI++P  S+IF+  P +L+++
Sbjct: 61  LPKVFKGSKYGKADYLDLLSLLYELLRKARREGLMAIESHIENPEESSIFSKYPKILKDH 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
            L  FICDY+R++++GN   +E+E LM+EEI+   +E LKP HA+  + ++LP  GIV A
Sbjct: 121 HLVEFICDYLRLMVMGNMNPHELEALMEEEIETHHHELLKPAHALQKVADALPGFGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG++  MG++   P++LG  I  +L GT LGI+L+Y    PL + ++    ++ +    
Sbjct: 181 VLGVVITMGSIDGPPEVLGVLIAAALVGTFLGILLAYGFVGPLAAALEQRVEEEIKFLEC 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
           VK  L+A +NG  PQ+A+E+GRKV+P   RPS   + + V
Sbjct: 241 VKVTLVASLNGYAPQLAVEFGRKVIPSDVRPSFAELEEWV 280

This model represents one family of MotA proteins which are often not identified by the "transporter, MotA/TolQ/ExbB proton channel family" model, pfam01618. Length = 282

 Score =  181 bits (462), Expect = 1e-46
 Identities = 86/272 (31%), Positives = 153/272 (56%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M  + GL + + C+ GG+   GG+   + QP EI+I+ GAG+G  ++ NP  V+K+    
Sbjct: 1   MQKLFGLLVVMGCVFGGYLMSGGSLSSIWQPGEIIIILGAGIGAMILGNPKSVLKEMWHQ 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           +  +   K  G +    +L LLY L+  +++G     + HI+ P  S++F   P +L+  
Sbjct: 61  IKGVIRRKEYGVEFQRQLLLLLYELLEMVQEGGLKRLDQHIEIPEESSLFQKYPLILQQK 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
            L TFI D  R++ +G    +E+E ++D+E+D +  E L+P  ++  + E++P  GI  A
Sbjct: 121 RLITFISDNFRLMAMGKINQHELEGILDQELDAVEEELLQPSRSLQRIAEAMPGFGICAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LGII  M ++  S   +G  +  +L GT LG+ + Y L +PL + ++    K+  L   
Sbjct: 181 VLGIIITMQSIDGSIAEIGLKVAAALVGTFLGVFICYCLMDPLANAMEQEIKKELSLLEC 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
           V+  L+A++ G    +A++ GRK+LPL  +P+
Sbjct: 241 VRTVLVAHVAGKPTLLAVDAGRKLLPLDNKPT 272

Length = 287

 Score = 79.6 bits (197), Expect = 9e-16
 Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 41/283 (14%)

Query: 2   STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
           +TIIGL + ++ ++ G    G +  +L+ P  I+I+    +   ++A P+  +K     +
Sbjct: 4   TTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELK----KV 59

Query: 62  LEIFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNE-------TENHIDDPYNSTIFTS 112
            ++F   +K     +  ++++            SR E         + IDDP        
Sbjct: 60  PKLFKVLFKEKKDPSKEELIEQFV----EWASESRREGLLALEAQLDEIDDP-------- 107

Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGES 171
                       F+   ++M+I G +  + I ++++EEI+ +  E+     AI +  G  
Sbjct: 108 ------------FLKRGLKMVIDGQSPEF-IRDVLEEEIEAM-EERHAAGAAIFTQAGTY 153

Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
            P +G++GA++G+I A+GNLS   K LG AI  +   TLLGI   Y L +P  +++K   
Sbjct: 154 APTLGVLGAVIGLIAALGNLSDIEK-LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKS 212

Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
            ++  L  I+ + ++A   G  P+V  E     L   ER  +E
Sbjct: 213 KEEIELKYIIIEGVLAIQEGNAPRVIEEKLLGYLSPKERKKLE 255

Length = 263

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 34/260 (13%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           +STI+G+ + +  I  G    GGNP  +I     +IV    L   + A   K +K +   
Sbjct: 3   LSTILGMVLAVASISVGDILEGGNPLHVIHLSSFIIVVPTALFAAMTATHKKYVKAAYKE 62

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
           L  +F  K  G +    + +L+ +     K G  +       I+D               
Sbjct: 63  LKIVF--KNPGVNLNERIKQLVELATLARKDGVLALEGRVAQIEDE-------------- 106

Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM----GESLPA 174
                 F+ + + M++ G     ++E +  E ++I + E  + YH  +H     GE+ P 
Sbjct: 107 ------FLKNGLSMLVDGK----DLEEI-KESMEIQIEEMEEYYHGAAHYWITAGETCPT 155

Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
           +G+VGA++G++ A+  L  +P  +   I  + T T+ GI+ SY+L  P   ++K+     
Sbjct: 156 MGLVGAVMGLMLALQKL-DNPAEMAAGIAGAFTATVTGIMGSYALFGPWGHKLKAKSKDI 214

Query: 235 HRLYIIVKKALIAYMNGAIP 254
            +   ++ + ++    GA P
Sbjct: 215 IKEKTVILEGILGIAEGANP 234

Length = 257

 Score =  229 bits (585), Expect = 8e-61
 Identities = 102/282 (36%), Positives = 150/282 (53%), Gaps = 21/282 (7%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M TIIGL +    ++GG+   GG+   LIQP  ++I+ G G+G F++ NP KV+K +  +
Sbjct: 3   MLTIIGLVLAFGSVLGGYILGGGSLGALIQPSSLLIIVGGGIGAFMVGNPGKVVKATPKA 62

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L E F  +   ++ Y D++ LLY L    +K      E   D+                 
Sbjct: 63  LKEAF--RKPKKEDYVDLIALLYELAEKARKEGLLALEALADE----------------- 103

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
               FI D +R+I+ GN    EIE LM+EEI+ +     KP HA +  G+  PA GIVGA
Sbjct: 104 IEDPFIKDGLRLIVDGND-PEEIEALMEEEIETMEERHEKPAHAFTTAGDYAPAFGIVGA 162

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           ++G+I A+GNL   P  LG  I  +L GTL GI L+Y L  PL +++K    ++ +L  I
Sbjct: 163 VMGLIHALGNLDD-PAELGALIAAALVGTLYGIFLAYGLFGPLANKLKQKSDEEVKLKEI 221

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
           + + L+A  NG  P++  E  RK L   ERPS   + +EV  
Sbjct: 222 IIEGLLAIQNGENPRILEEKLRKFLSPKERPSFAELEEEVRG 263

Length = 266

 Score = 49.9 bits (120), Expect = 7e-07
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
           MG   P IGI+GA++G+I  M NL+  P  LG+ I V+   T+ G+  +  L  P+ +++
Sbjct: 149 MGGYAPTIGIIGAVMGLIHVMENLA-DPSQLGSGIAVAFVATIYGVASANLLFLPVANKL 207

Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
           KS   +Q R   ++ + L+A   G  P+  IE
Sbjct: 208 KSIIHRQSRYREMLVEGLVAIAEGENPRS-IE 238

Length = 246

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 3/104 (2%)

Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
            G+  PA+G++G ++G++  + N+   PK +G A+ V+L  TL G +L+  +  P+  ++
Sbjct: 146 FGDVAPAMGMIGTLIGLVAMLSNMD-DPKSIGPAMAVALLTTLYGAVLANMVAIPIADKL 204

Query: 228 KSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
            S R+ +  L   ++  A++A  +G  P+V   + +  L   +R
Sbjct: 205 -SLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKNYLAEKKR 247

Length = 254

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)

Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
           FI   +R+++ G     E++ ++ ++++  +YE  K    +  +G+  PA G++G ++G+
Sbjct: 104 FIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 162

Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
           I  + NL  + +I GT + V++  TL G +L+  +  PL  ++
Sbjct: 163 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 204

Length = 254

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 19/55 (34%), Positives = 29/55 (52%)

Query: 3  TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
          ++IGL +  + IIGG    GG+   L+     +IV G  LG  ++  PL V K +
Sbjct: 5  SLIGLILAFVAIIGGQVLEGGHLGSLLNGPAFLIVIGGTLGAVLLQTPLAVFKRA 59

Length = 246

Probab=100.00  E-value=0  Score=605.52  Aligned_cols=282  Identities=40%  Similarity=0.735  Sum_probs=278.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             96899999999999999997099811242489999999999999998589899999999999963578899666899999
Q gi|255764488|r    1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK   80 (290)
Q Consensus         1 l~tIiGlv~~~~~I~~g~~~~GG~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~   80 (290)
T Consensus         1 M~~iiGlv~~~~~i~~g~~l~Gg~~~~~~~~~s~lIV~Ggtlga~li~~p~~~i~~~~~~~~~~f~~~~~~~~~~~e~i~   80 (283)
T PRK09110          1 MLIIIGYIVVLGSVFGGYLLAGGHLGALIQPFELLIIGGAALGAFIVGNPGKAIKATLKALPKVFKGPKYKKADYMDLLA   80 (283)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             92099999999999999995489842884644799588789999999788999999999999995687898143899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999974104744764207421145553235530620279999999999963789899999999999999999621
Q gi|255764488|r   81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK  160 (290)
Q Consensus        81 ~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~  160 (290)
T Consensus        81 ~l~~la~~aRr~GllaLE~~ie~p~~s~if~~~p~~~~d~~~~~fi~dgl~l~vdg~~~~~~i~~iLe~ei~~~~~r~~~  160 (283)
T PRK09110         81 LLYELLRKARQEGMMALEAHIENPEESPIFAKYPKILADHHLVEFICDYLRLMISGNMNPHEIEALMDEEIETHHHEAEV  160 (283)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999986249999877448421367772315531503789999878999658999899999999999999999987


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             28999999999888889999999999996148978999866689999999999999999999999999999999999999
Q gi|255764488|r  161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII  240 (290)
Q Consensus       161 ~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~  240 (290)
T Consensus       161 ~~~~~~~~g~~aPa~GmiGtviGLI~~l~~l~~~p~~lG~~mAvALvtT~YGv~lAn~i~~PiA~kL~~~~~~e~~~~~~  240 (283)
T PRK09110        161 PAHALQTVADALPAFGIVAAVLGVVKTMGSIDQPPAVLGALIGAALVGTFLGILLAYGFVGPLAAKLEQVVEEDTKMYQC  240 (283)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88999999987728889999999999998448998999889999999999999999999999999999889999999999


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHH
Q ss_conf             999999995799968999998311996768388999999970
Q gi|255764488|r  241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ  282 (290)
Q Consensus       241 i~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e~~~~~~~  282 (290)
T Consensus       241 i~eGilai~~G~nPrv~~E~lr~~lp~~~rps~~e~e~~~~~  282 (283)
T PRK09110        241 IKVTLLASLNGYAPQIAVEFGRKTLPSTERPSFAELEEHVRG  282 (283)
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHC
T ss_conf             999999985899949999998832891209999999998746

Probab=100.00  E-value=0  Score=572.99  Aligned_cols=286  Identities=30%  Similarity=0.576  Sum_probs=282.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             96899999999999999997099811242489999999999999998589899999999999963578899666899999
Q gi|255764488|r    1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK   80 (290)
Q Consensus         1 l~tIiGlv~~~~~I~~g~~~~GG~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~   80 (290)
T Consensus         1 M~~iiGliv~~~~v~gg~~l~GG~l~~l~qp~e~lII~GgtigA~li~~p~~~lk~~~~~l~~~f~~~~~~~~~~~~ll~   80 (287)
T PRK12482          1 MQKLFGLLVIMGCVFGGYLMSGGSLSSIWQPGEIIIIFGAGIGALILGNPKSVLKEMWHQIKGVIRRKEYGVEFQRQLLL   80 (287)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             92099999999999999997389725986888899999899999977087999999999999986376788678999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999974104744764207421145553235530620279999999999963789899999999999999999621
Q gi|255764488|r   81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK  160 (290)
Q Consensus        81 ~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~  160 (290)
T Consensus        81 ll~~l~~~aRr~GllaLE~~ie~pe~s~iF~~~p~i~~d~~~~~fi~D~lrl~v~g~~~~~~i~~iLe~ei~~~~~~~~~  160 (287)
T PRK12482         81 LLYELLEMVDEGGLKRLDQHIEIPENSSLFQKYPLILQDKHLITFISDNFRLMAMGKINQHELEGILEQELSAVEEELLQ  160 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999998369999987607322277762504413504789998527887168989899999999999999999865


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             28999999999888889999999999996148978999866689999999999999999999999999999999999999
Q gi|255764488|r  161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII  240 (290)
Q Consensus       161 ~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~  240 (290)
T Consensus       161 ~~~~~~~~g~~aPa~GIvgaVlGlI~~M~~l~~~pa~LG~~IA~ALVgTfyGi~lAy~~~~PiA~kLk~~~~~e~~~~~~  240 (287)
T PRK12482        161 PSRSLQRIAEAMPGFGICAAVLGIIITMQSIDGSIAEIGLKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKELSLLEC  240 (287)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             68999999865733369999999999998348999999999999999999999999998988999999999999899999


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCC
Q ss_conf             9999999957999689999983119967683889999999702434
Q gi|255764488|r  241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN  286 (290)
Q Consensus       241 i~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e~~~~~~~~~~~  286 (290)
T Consensus       241 ik~~l~A~~~G~~P~~avE~gRk~i~~~~rPsf~ele~~~~~~~~~  286 (287)
T PRK12482        241 VRTVLVAHVAGKPTLLAVDAGRKLLPLDNKPTFATLDSWINKMITA  286 (287)
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             9999999727999399999987118977798989999999986408

Probab=100.00  E-value=0  Score=540.40  Aligned_cols=259  Identities=24%  Similarity=0.397  Sum_probs=248.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             96899999999999999997099811242489999999999999998589899999999999963578899666899999
Q gi|255764488|r    1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK   80 (290)
Q Consensus         1 l~tIiGlv~~~~~I~~g~~~~GG~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~   80 (290)
T Consensus         3 ~~tiiGli~~~~~i~~g~~~~Gg~~~~~~~~~s~lIV~GGt~~a~li~~p~~~i~~~~~~~~~~f~~~~~--~~~~~li~   80 (263)
T PRK08124          3 ITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAALIIIVGTIAAVMIAFPMSELKKVPKLFKVLFSEKKD--LSKEELLE   80 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC--CCHHHHHH
T ss_conf             6899999999999999999749985888466579988989999999968899999999999999538887--89999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999974104744764207421145553235530620279999999999963789899999999999999999621
Q gi|255764488|r   81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK  160 (290)
Q Consensus        81 ~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~  160 (290)
T Consensus        81 ~l~~la~~aRk~GllaLE~~i~~~~d-----------------~Fl~~gl~l~vdG~-~~~~i~~~L~~ei~~~~~r~~~  142 (263)
T PRK08124         81 LFVEWASESRREGLLALEQQLDEIDD-----------------PFLKRGMKMVIDGQ-SAEFIRDVLEEEIEAMEERHAA  142 (263)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHCCCCC-----------------HHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999987476768876506687-----------------89998589852899-9999999999999999999873


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             28999999999888889999999999996148978999866689999999999999999999999999999999999999
Q gi|255764488|r  161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII  240 (290)
Q Consensus       161 ~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~  240 (290)
T Consensus       143 ~~~v~~~~~~~aPafGmiGtvlGLI~~L~~l~d-p~~iG~~mA~ALvtT~yGvllAn~~~~PiA~kl~~~~~~e~~~~~~  221 (263)
T PRK08124        143 GAAIFTQAGTYAPTLGVLGAVIGLIAALGNLND-IEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIEKKYI  221 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             147999999873677599999999999872599-9999988999999999999999999988999999899999999899


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHH
Q ss_conf             9999999957999689999983119967683889999999
Q gi|255764488|r  241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV  280 (290)
Q Consensus       241 i~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e~~~~~  280 (290)
T Consensus       222 i~egil~i~~g~~P~~i~e~L~~~L~p~~r~~~~e~~e~~  261 (263)
T PRK08124        222 IIEGVLAIQEGNAPRIIEEKLLGYLSPKERKKLEEGAEKN  261 (263)
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCHHHCHHHHHHHHHC
T ss_conf             9999999868998799999998609962364358765412

Probab=100.00  E-value=0  Score=525.48  Aligned_cols=254  Identities=24%  Similarity=0.306  Sum_probs=242.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             96899999999999999997099811242489999999999999998589899999999999963578899666899999
Q gi|255764488|r    1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK   80 (290)
Q Consensus         1 l~tIiGlv~~~~~I~~g~~~~GG~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~   80 (290)
T Consensus         3 ~~tiiGli~~~~~i~~g~~l~gg~~~~~~~~~s~lIV~GGtl~a~~i~~~~~~~~~~~~~l~~~f~~~~~~~---~~~i~   79 (257)
T PRK08456          3 LSTILGMVLAVASISVGDILEGGNPLHVIHLSSVLIVVPTALFAAMTATHKKYVKAAYKELKIVFKNPGINL---NERIK   79 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCH---HHHHH
T ss_conf             689999999999999999985998047735507998999999999997789999999999999967999998---99999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999974104744764207421145553235530620279999999999963789899999999999999999621
Q gi|255764488|r   81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK  160 (290)
Q Consensus        81 ~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~  160 (290)
T Consensus        80 ~lv~la~~aRk~GllaLE~~v~~~~d-----------------~Fl~~gl~l~vdG~-~~~~i~~~Le~ei~~~~~r~~~  141 (257)
T PRK08456         80 QLVELATLARKDGVLALEGRVAQIED-----------------EFLKNGLSMLVDGK-DLEEIKESMEIQIEELEEYYHG  141 (257)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHCCCCC-----------------HHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999876677667742137787-----------------69999999983799-8899999999999999999973


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             28999999999888889999999999996148978999866689999999999999999999999999999999999999
Q gi|255764488|r  161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII  240 (290)
Q Consensus       161 ~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~  240 (290)
T Consensus       142 ~~~~~~~~~~~aPafGmiGtvlGLI~~l~~l~d-p~~iG~~mA~ALvtTfyGvllAn~v~~PiA~KL~~~~~~e~~~~~~  220 (257)
T PRK08456        142 AAHYWITAGETCPTMGLVGAVMGLMLALQLLDN-PAEMAAGIAGAFTATVTGIMGSYALFGPWGHKMKAKSKDIIKEKTV  220 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             368999999874588799999999999980699-9999989999999999999999999999999999789999999999


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHH
Q ss_conf             9999999957999689999983119967683889999
Q gi|255764488|r  241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA  277 (290)
Q Consensus       241 i~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e~~  277 (290)
T Consensus       221 i~eGil~I~~g~nP~~i~ekL~sfL~p~~~-k~~~~~  256 (257)
T PRK08456        221 ILEAIKGIAEGANPRDLEEKLFNFLSPGEP-KISQFE  256 (257)
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCCCCC-HHHHCC
T ss_conf             999999987799869999999861896521-444303

Probab=100.00  E-value=0  Score=519.96  Aligned_cols=258  Identities=18%  Similarity=0.241  Sum_probs=239.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             96899999999999999997099--8112424899999999999999985898999999999999635788996668999
Q gi|255764488|r    1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV   78 (290)
Q Consensus         1 l~tIiGlv~~~~~I~~g~~~~GG--~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~el   78 (290)
T Consensus         6 ~~TiiGli~G~~~v~~~i~~g~~~~g~~~f~~~~s~lIV~GGtl~a~lis~p~~~i~~~~~~~~~~f~~~~~---~~~~~   82 (272)
T PRK06926          6 YLTPVGFILGITILVLGIVSGSGLSGISSFIDLTSFFIVTGGLCAAVFISFSPKDLKKAPRVLKQAFIRQED---DVKEL   82 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC---CHHHH
T ss_conf             899999999999999999977537779999566179989989999999978999999999999998658888---99999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999741047447642074211455532355306202799999999999637898999999999999999996
Q gi|255764488|r   79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK  158 (290)
Q Consensus        79 i~~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~  158 (290)
T Consensus        83 i~~l~~la~~aRk~GllaLE~~~~~~~-----------------dpFl~~gl~l~vdg~-~~~~i~~iLe~ei~~~~~r~  144 (272)
T PRK06926         83 VQTFVSLSEQARREGLLSLDAQLDEVK-----------------DPFLKKGLLLAIDGW-DEETIRDVMDSEIAAMEERH  144 (272)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHCCCC-----------------CHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999998756765887650657-----------------879998899985899-99999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             21289999999998888899999999999961489789998666899999999999999999999999999999999999
Q gi|255764488|r  159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY  238 (290)
Q Consensus       159 ~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~  238 (290)
T Consensus       145 ~~~~~~~~~~g~~aPafGmiGTviGLI~mL~~l~d-p~~iG~~mAvALvtTlYGv~lAn~~f~PiA~KL~~~~~~e~~~~  223 (272)
T PRK06926        145 RKGRRLFEKAGEFAPAWGMIGTLVGLVLMLKNLND-PHTLGPNMAVALLTTLYGTLLANLVFIPIAAKLEEKTESEIFIK  223 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88889999999872588799999999999881699-99998888999999999999999999889999998889999998


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHH
Q ss_conf             999999999957999689999983119967683889999999
Q gi|255764488|r  239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV  280 (290)
Q Consensus       239 ~~i~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e~~~~~  280 (290)
T Consensus       224 ~miieGil~I~~g~nP~~ie~kL~sfL~p~~r~~~~~~~~~~  265 (272)
T PRK06926        224 QVMIEGIIGVQSGQNPRNLESQLVVFSSKEDWQKKRADRSKK  265 (272)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHH
T ss_conf             999999999877998499999999749988886650005677

Probab=100.00  E-value=0  Score=521.03  Aligned_cols=262  Identities=39%  Similarity=0.603  Sum_probs=252.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             96899999999999999997099811242489999999999999998589899999999999963578899666899999
Q gi|255764488|r    1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK   80 (290)
Q Consensus         1 l~tIiGlv~~~~~I~~g~~~~GG~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~   80 (290)
T Consensus         3 m~tiiGlvl~~~~i~~G~i~~Gg~~~~l~~~~s~lII~gg~i~A~~~~~p~~~vk~~~k~~~~~F~--~~k~~~~~~li~   80 (266)
T COG1291           3 MLTIIGLVLAFGSVLGGYILGGGSLGALIQPSSLLIIVGGGIGAFMVGNPGKVVKATPKALKEAFR--KPKKEDYVDLIA   80 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHEEECHHHHHHHHCCCHHHHHHHHHHHHHHHH--CCCHHHHHHHHH
T ss_conf             788999999999999989726886235405123320302157898862868999999999999984--576202999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999974104744764207421145553235530620279999999999963789899999999999999999621
Q gi|255764488|r   81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK  160 (290)
Q Consensus        81 ~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~  160 (290)
T Consensus        81 ~l~~la~~~Rk~GllaLE~~~-----------------~~~~d~Fi~~glrliVdG~~-~~~I~~~me~Ei~~~ee~~~~  142 (266)
T COG1291          81 LLYELAEKARKEGLLALEALA-----------------DEIEDPFIKDGLRLIVDGND-PEEIEALMEEEIETMEERHEK  142 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-----------------HHCCCHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999870187799888-----------------62414589966798715898-899999999999999998753


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             28999999999888889999999999996148978999866689999999999999999999999999999999999999
Q gi|255764488|r  161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII  240 (290)
Q Consensus       161 ~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~  240 (290)
T Consensus       143 ~a~~~~~~g~~aPa~GivgaV~GlI~~l~~l~~-p~~LG~~iA~Alv~T~~Gi~~ay~~~~P~a~kLk~~~~~e~~~~~~  221 (266)
T COG1291         143 PAHAFTTAGDYAPAFGIVGAVMGLIHALGNLDD-PAELGALIAAALVGTLYGIFLAYGLFGPLANKLKQKSDEEVKLKEI  221 (266)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             899999988458266699999999999882799-7888889999999999999999897868899998888999999999


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHC
Q ss_conf             9999999957999689999983119967683889999999702
Q gi|255764488|r  241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY  283 (290)
Q Consensus       241 i~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e~~~~~~~~  283 (290)
T Consensus       222 i~e~ll~i~~G~nP~i~~e~l~~~L~~~er~~~~e~e~~~~~~  264 (266)
T COG1291         222 IIEGLLAIQNGENPRILEEKLRKFLSPKERPSFAELEEEVRGE  264 (266)
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
T ss_conf             9999999954899488999988628912276568899986467

Probab=100.00  E-value=0  Score=514.13  Aligned_cols=249  Identities=19%  Similarity=0.277  Sum_probs=234.9

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHH---HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             99999999999999970998112---424899999999999999985898999999999999635788996668999999
Q gi|255764488|r    5 IGLFITILCIIGGFYAMGGNPYI---LIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL   81 (290)
Q Consensus         5 iGlv~~~~~I~~g~~~~GG~l~~---f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~~   81 (290)
T Consensus         1 iGl~~g~~~v~~~~~l~gg~~~~l~~f~~~~s~lIV~GGt~~a~li~~~~~~i~~~~~~~~~~~~~~~~~---~~~~i~~   77 (254)
T PRK06743          1 VGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSIFTVLHRREED---LEQLTDL   77 (254)
T ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC---HHHHHHH
T ss_conf             9247999999999998187477887414705668457799999999778999999999999996677789---9999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999741047447642074211455532355306202799999999999637898999999999999999996212
Q gi|255764488|r   82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP  161 (290)
Q Consensus        82 l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~~  161 (290)
T Consensus        78 lv~la~~aRk~GllaLE~~~~~~~-----------------dpFl~~gl~l~vdG~-d~~~i~~~L~~ei~~~~~r~~~~  139 (254)
T PRK06743         78 FVDFSKKSKKHGLLSLEVDGEQVD-----------------NPFIQKGIRLMLSGY-DEDELKEVLMKDVETEVYELRKG  139 (254)
T ss_pred             HHHHHHHHHHCHHHHHHHHHCCCC-----------------CHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999985430877776532379-----------------889999999982799-99999999999999999999988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999998888899999999999961489789998666899999999999999999999999999999999999999
Q gi|255764488|r  162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV  241 (290)
Q Consensus       162 ~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~i  241 (290)
T Consensus       140 ~~v~~~~g~~APafGmiGTviGLI~mL~~l~d-p~~iG~~mAvAlvtTlYG~~lAnl~flPiA~KL~~~~~~e~~~~~mi  218 (254)
T PRK06743        140 AALLDKIGDFAPAWGMIGTLIGLIIMLQNLQD-TSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFV  218 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999764378899999999999872699-99998999999999999999999999999999998899999998999


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHH
Q ss_conf             9999999579996899999831199676838899
Q gi|255764488|r  242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI  275 (290)
Q Consensus       242 ~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e  275 (290)
T Consensus       219 iEGil~I~~genP~~ie~kL~sfL~~~~~~~~~~  252 (254)
T PRK06743        219 IEAISELYRGQIPSKLKLKLDTYVYETKIKKVKR  252 (254)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHC
T ss_conf             9999998879986999999998589576787761

Probab=100.00  E-value=0  Score=507.68  Aligned_cols=244  Identities=25%  Similarity=0.378  Sum_probs=234.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             96899999999999999997099811242489999999999999998589899999999999963578899666899999
Q gi|255764488|r    1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK   80 (290)
Q Consensus         1 l~tIiGlv~~~~~I~~g~~~~GG~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~   80 (290)
T Consensus         3 ~~tiiGlv~~~~~i~~g~~~~gg~~~~~~~~~s~lIV~GGt~~A~li~~p~~~~~~~~~~~~~~f~~~~~~---~~~~i~   79 (246)
T PRK09109          3 VLSLIGLILAFVAIIGGNFLEGGHLGSLLNGPAALIVIGGTLGAVLLQTPLSVFKRAFKILRWVFFPPRSD---LEGGID   79 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC---HHHHHH
T ss_conf             78999999999999999998499738886455899999999999998088999999999999985688899---999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999974104744764207421145553235530620279999999999963789899999999999999999621
Q gi|255764488|r   81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK  160 (290)
Q Consensus        81 ~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~  160 (290)
T Consensus        80 ~l~~la~~aR~~GllaLE~~i~~~~d-----------------~Fl~~gl~l~vdg~-~~~~i~~~L~~ei~~~~~r~~~  141 (246)
T PRK09109         80 RIVEWSMTARKEGLLGLEDVADREPD-----------------PFARKGLQLLVDGA-EPESIRSVLEVEIDTQEHRDLQ  141 (246)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHCCCCC-----------------HHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999976453115666316688-----------------69998899985799-9999999999999999999982


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             28999999999888889999999999996148978999866689999999999999999999999999999999999999
Q gi|255764488|r  161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII  240 (290)
Q Consensus       161 ~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~  240 (290)
T Consensus       142 ~~~~~~~~g~~aPafGmiGtviGLI~mL~~l~d-p~~lG~~mA~ALvtT~yGv~lAn~v~~PiA~kl~~~~~~e~~~~~~  220 (246)
T PRK09109        142 AAKVFESMGGYAPTIGIIGAVMGLIHVMENLAD-PSQLGSGIAVAFVATIYGVASANLLFLPVANKLKSVIARQSRYREM  220 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             778999999872676499999999999880699-9999988799999999999999999988999999999999999899


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCC
Q ss_conf             99999999579996899999831199
Q gi|255764488|r  241 VKKALIAYMNGAIPQVAIEYGRKVLP  266 (290)
Q Consensus       241 i~egi~~i~~g~~P~~~~e~l~~~lp  266 (290)
T Consensus       221 i~egil~i~~g~~P~~i~~kL~s~L~  246 (246)
T PRK09109        221 LVEGLVAIAEGENPRSIELKLQGYLH  246 (246)
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf             99999998689985999999987639

Probab=100.00  E-value=0  Score=506.82  Aligned_cols=246  Identities=20%  Similarity=0.318  Sum_probs=232.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             96899999999999999997099811242489999999999999998589899999999999963578899666899999
Q gi|255764488|r    1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK   80 (290)
Q Consensus         1 l~tIiGlv~~~~~I~~g~~~~GG~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~   80 (290)
T Consensus         3 ~~tiiGli~~~~~i~~~~~-~gg~~~~f~~~~s~lIV~GGt~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~   78 (253)
T PRK08990          3 LATLIGLIGAFAFVIMAMV-LGGGIGMFVDVPSILIVFGGSLFVVLMKFNLGQFFGAGKIAGKAFMFKIDK---PEDLIE   78 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC---HHHHHH
T ss_conf             6899999999999999999-578679897513588779989999998487999999988999996167778---999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999974104744764207421145553235530620279999999999963789899999999999999999621
Q gi|255764488|r   81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK  160 (290)
Q Consensus        81 ~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~  160 (290)
T Consensus        79 ~l~~la~~aRk~GllaLE~~--~-----------------i~~~Fl~~gl~l~vDG~-~~e~i~~~L~~ei~~~~~r~~~  138 (253)
T PRK08990         79 QSVEMADAARKGGFLALEEA--E-----------------ISNSFMQKGVDMLVDGH-DGDVVRAALEKDIALTEERHET  138 (253)
T ss_pred             HHHHHHHHHHHCCHHHHHCC--C-----------------CCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999985672432025--6-----------------89889999999997699-9999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             28999999999888889999999999996148978999866689999999999999999999999999999999999999
Q gi|255764488|r  161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII  240 (290)
Q Consensus       161 ~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~  240 (290)
T Consensus       139 ~~~v~~~~g~~aPafGmiGTviGLI~mL~~l~d-p~~iG~~mA~ALvtTlYGillAnl~~~PiA~KL~~~~~~e~~~~~~  217 (253)
T PRK08990        139 GIGIFRAFGDVAPAMGMIGTLIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVLANMVAIPIADKLSLRMGEEMLNRNL  217 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             678999999871688799999999999980699-9999988899999999999999999999999999899999999899


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCHHHCC
Q ss_conf             9999999957999689999983119967683
Q gi|255764488|r  241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP  271 (290)
Q Consensus       241 i~egi~~i~~g~~P~~~~e~l~~~lp~~~r~  271 (290)
T Consensus       218 i~eGil~I~~g~nP~~i~~kL~syL~~~~r~  248 (253)
T PRK08990        218 IMDAVLAIQDGQNPRVIEGFLKNYLAEKKRK  248 (253)
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHCCHHHCC
T ss_conf             9999999877998799999999729914015

Probab=99.70  E-value=1.4e-15  Score=118.06  Aligned_cols=119  Identities=18%  Similarity=0.242  Sum_probs=104.6

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCHHHH
Q ss_conf             7999999999996378989999999999999999962128999999999888889999999999996148----978999
Q gi|255764488|r  123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL  198 (290)
Q Consensus       123 ~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~----d~p~~l  198 (290)
T Consensus        16 ~~~~~~~~~~~~~~~~~~e~i~~ame~~~~~e~~~le~~l~~L~ti~~~AP~lGLlGTV~Gmi~~F~~i~~~g~~~~~~~   95 (139)
T pfam01618        16 LSFVRLGLAPLIERGAFKEFLRLALEEALDAELRKLERGLTILATIGSVAPFLGLLGTVWGIIHAFIHIGQTGQADPAVV   95 (139)
T ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf             89999870102354214899999999999999999984869999999894798999999999999998873567768888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86668999999999999999999999999999999999999999
Q gi|255764488|r  199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK  242 (290)
Q Consensus       199 G~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~i~  242 (290)
T Consensus        96 a~GI~~ALitTa~GL~vA-Ipa~i~yn~l~~r~~~~~~~~E~f~  138 (139)
T pfam01618        96 APGISEALVATALGLFVA-IPALLAYNVLKRKVEQLSLKIEAFA  138 (139)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             769999999999999999-9999999999999999999998760

This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.

Probab=99.61  E-value=1.8e-12  Score=98.48  Aligned_cols=114  Identities=12%  Similarity=0.160  Sum_probs=104.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---C-CHHHHHHHHHHHHHHHHHHHH
Q ss_conf             989999999999999999962128999999999888889999999999996148---9-789998666899999999999
Q gi|255764488|r  139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---Q-SPKILGTAIGVSLTGTLLGII  214 (290)
Q Consensus       139 ~~~~i~~~L~~ei~~~~~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~---d-~p~~lG~~iA~ALitTlYGv~  214 (290)
T Consensus        96 ~~e~~~~al~~~~~~~~~~l~~~L~~LatI~s~aP~lGL~GTV~GIm~aF~~i~~~~~~~~a~vA~GIseAL~aTA~GL~  175 (216)
T COG0811          96 LKERARRALEEAIAREERRLERGLTLLATIGSIAPFLGLLGTVWGIMPAFIGIGAGGGADLAVVAPGISEALIATAIGLF  175 (216)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             58999999999999999998867759999998311888999999999999998567899999998789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             999999999999999999999999999999999957999
Q gi|255764488|r  215 LSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI  253 (290)
Q Consensus       215 lAn~i~~Pia~kl~~~~~~e~~~~~~i~egi~~i~~g~~  253 (290)
T Consensus       176 vA-IPAvi~yn~l~r~~~~~~~~~e~~~~~l~~~~~~~~  213 (216)
T COG0811         176 VA-IPAVVAYNVLRRKVEELLAKLEDFAEELELILRRQY  213 (216)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99-999999999999999999999999999999982210

Probab=99.37  E-value=1.9e-09  Score=79.23  Aligned_cols=115  Identities=17%  Similarity=0.181  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999962128999999999888889999999999996148----978999866689999999999999
Q gi|255764488|r  141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS  216 (290)
Q Consensus       141 ~~i~~~L~~ei~~~~~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~----d~p~~lG~~iA~ALitTlYGv~lA  216 (290)
T Consensus       103 e~~~ral~~~~~~e~~~le~~L~~LaTi~s~APfiGLlGTV~Gii~aF~~i~~~g~~~~~~vA~GI~EALiaTA~GL~VA  182 (227)
T PRK10801        103 EGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAA  182 (227)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999985860767612422699999999999999999863567757877779999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             9999999999999999999999999999999957999689
Q gi|255764488|r  217 YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV  256 (290)
Q Consensus       217 n~i~~Pia~kl~~~~~~e~~~~~~i~egi~~i~~g~~P~~  256 (290)
T Consensus       183 -IPAvi~YN~~~~~i~~~~~~me~fa~el~~~l~rq~~~~  221 (227)
T PRK10801        183 -IPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTV  221 (227)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             -999999999999999999999999999999999877501

Probab=99.15  E-value=3.7e-08  Score=71.03  Aligned_cols=106  Identities=13%  Similarity=0.252  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHHH--
Q ss_conf             99999999999999962128999999999888889999999999996148----978999866689999999999999--
Q gi|255764488|r  143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS--  216 (290)
Q Consensus       143 i~~~L~~ei~~~~~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~----d~p~~lG~~iA~ALitTlYGv~lA--  216 (290)
T Consensus       106 ~~~~l~r~i~~~~~~le~~L~fLATigS~APFIGLfGTVWGIM~aF~~Ia~~g~asla~VApGIaEALiaTA~GL~vAIP  185 (239)
T PRK10414        106 TSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIP  185 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999998051699999722348999999999999999998657997898778899999999999999999


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             -999999999999999999999999999999995799
Q gi|255764488|r  217 -YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA  252 (290)
Q Consensus       217 -n~i~~Pia~kl~~~~~~e~~~~~~i~egi~~i~~g~  252 (290)
T Consensus       186 Av~~YN~f~~~~~~----~~~~~~~Fa~e~~~~~~r~  218 (239)
T PRK10414        186 AVVIYNVFARQIGG----YKAMLGDVAAQVLLLQSRD  218 (239)
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999----9999999999999998753

Probab=98.85  E-value=4e-08  Score=70.83  Aligned_cols=108  Identities=15%  Similarity=0.251  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999621289999999998888899999999999961489-----78999866689999999999999
Q gi|255764488|r  142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILS  216 (290)
Q Consensus       142 ~i~~~L~~ei~~~~~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d-----~p~~lG~~iA~ALitTlYGv~lA  216 (290)
T Consensus       106 ~~~Ram~~~~~rE~~~Le~~L~fLATvGS~sPfIGLFGTVWGIM~sF~~ig~~~~qatLA~VAPGIAEALiATAiGLfAA  185 (219)
T TIGR02796       106 RIDRAMRVALNRELEKLESGLPFLATVGSTSPFIGLFGTVWGIMHSFQAIGGSKNQATLAVVAPGIAEALIATAIGLFAA  185 (219)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999988614650322432226524433305478899998767643455541524789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999999999999999999957
Q gi|255764488|r  217 YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN  250 (290)
Q Consensus       217 n~i~~Pia~kl~~~~~~e~~~~~~i~egi~~i~~  250 (290)
T Consensus       186 -IPAViAYN~f~~~~~~i~~~~e~F~~EF~~iL~  218 (219)
T TIGR02796       186 -IPAVIAYNKFSTQVNKIEQRYENFADEFSSILQ  218 (219)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             -899999999999999999998889999997502

Together with TolR, it harnesses proton motive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this entry describes TolQ specifically, as found in tol-pal operons. A close homologue, excluded from this entry, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species..

Probab=97.98  E-value=1.6e-05  Score=54.30  Aligned_cols=91  Identities=15%  Similarity=0.326  Sum_probs=69.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHH
Q ss_conf             789899999999999999999621289999999998888899999999999961489----7899986668999999999
Q gi|255764488|r  137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLG  212 (290)
Q Consensus       137 ~~~~~~i~~~L~~ei~~~~~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d----~p~~lG~~iA~ALitTlYG  212 (290)
T Consensus        97 G~kE-Rv~~~L~r~e~~~gR~~~~GtG~LATIGa~aPFVGLFGTVWGIMnsFigIs~~qTTnLAVVAPGIAEALLATA~G  175 (213)
T TIGR02797        97 GIKE-RVASRLERIEAAAGRRMSRGTGVLATIGATAPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALG  175 (213)
T ss_pred             CCHH-HHHHHHHHHHHHHCCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHH
T ss_conf             6146-889999999998330000368720312001253222102775887888766652204000352378999999988


Q ss_pred             HHHH---HHHHHHHHHHHH
Q ss_conf             9999---999999999999
Q gi|255764488|r  213 IILS---YSLCNPLTSQIK  228 (290)
Q Consensus       213 v~lA---n~i~~Pia~kl~  228 (290)
T Consensus       176 LVAAIPAVvIYN~faR~i~  194 (213)
T TIGR02797       176 LVAAIPAVVIYNVFARSIA  194 (213)
T ss_pred             HHHHHHHHHHHHHHHHHHH
T ss_conf             9988548988865875699

The paired proteins MotA and MotB, TolQ and TolR, and ExbB and ExbD harness the proton-motive force to drive the flagellar motor, energize the Tol-Pal system, or energize TonB, respectively. Tol-Pal and TonB are both active at the outer membrane. Genomes may have many different TonB-dependent receptors, of which many of those characterised are involved in siderophore transport across the outer membrane..

Probab=97.63  E-value=0.00012  Score=48.69  Aligned_cols=78  Identities=19%  Similarity=0.432  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---C--CHHHHH
Q ss_conf             99999999996378989999999999999999962128999999999888889999999999996148---9--789998
Q gi|255764488|r  125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---Q--SPKILG  199 (290)
Q Consensus       125 fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~---d--~p~~lG  199 (290)
T Consensus        32 f~rk---i~v~~Y~~~~qld~dl~-----------~NlT~isiIgsNAPYiGLLGTVIGImvTFY~~G~gggdID~~~i~   97 (139)
T TIGR02805        32 FYRK---IKVKRYEDVEQLDDDLS-----------RNLTVISIIGSNAPYIGLLGTVIGIMVTFYEMGLGGGDIDVKAIL   97 (139)
T ss_pred             HHHC---CCHHCCCCHHHHHHHHH-----------CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf             8740---22102146678999885-----------320411225002550125578999999888632566764511545


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             66689999999999999
Q gi|255764488|r  200 TAIGVSLTGTLLGIILS  216 (290)
Q Consensus       200 ~~iA~ALitTlYGv~lA  216 (290)
T Consensus        98 ~gLSLALKATALGlLVA  114 (139)
T TIGR02805        98 VGLSLALKATALGLLVA  114 (139)
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             56128999999779999

Note that this family represents one of at least two distinct groups TolQ homologues designated ExbB - see also IPR014164 from INTERPRO. Each group associates with a distinct group of ExbD proteins, and a single species may have two ExbB/ExbD/TonB systems..

Probab=94.68  E-value=0.33  Score=26.87  Aligned_cols=218  Identities=13%  Similarity=0.106  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf             99999999999999970998112424899999999999999985898999999999999635788996668999999999
Q gi|255764488|r    5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYI   84 (290)
Q Consensus         5 iGlv~~~~~I~~g~~~~GG~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~~l~e   84 (290)
T Consensus        11 ~~~~~~l-~~~~g~~~-gg~~g~~~---~~~~~~~~~~~~~~~---------s~~i~l~~~~a~~v~~~e~p~L~~~v~~   76 (288)
T PRK03982         11 MALLTGL-LYGIGYLL-GGSPGMII---AIILALITNLISYYY---------SDKIVLASYGAQIVSESEAPELYRIVER   76 (288)
T ss_pred             HHHHHHH-HHHHHHHH-HCHHHHHH---HHHHHHHHHHHHHHH---------HHHHHHHHCCCEECCCCCCHHHHHHHHH
T ss_conf             9999999-99999999-47699999---999999999999997---------3999999829887881216899999999


Q ss_pred             HHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999997410474476-4207421145553235530620279999999999963789899999999999999999621289
Q gi|255764488|r   85 LMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH  163 (290)
Q Consensus        85 l~~~~Rk~GllaLE~-~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~~~~  163 (290)
T Consensus        77 la~~---aglp~P~v~i~~~~~pNAFa~G~----~~~~~~V~vt~GL---L~-~L~~dEl~aVlAHElgHi~n~D~~~~~  145 (288)
T PRK03982         77 LANR---ANIPKPKVAIVPTQTPNAFATGR----DPKHAVVAVTEGI---LN-LLNEDELEGVIAHELTHIKNRDTLIQT  145 (288)
T ss_pred             HHHH---CCCCCCEEEEEECCCCCEEEECC----CCCCEEEEEEHHH---HH-HCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             9997---69897948997089976687268----9998589964899---87-389999999999999999723399999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH
Q ss_conf             9999999988888999999999999614897899986668999999999999999999999999999999999----999
Q gi|255764488|r  164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR----LYI  239 (290)
Q Consensus       164 ~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~----~~~  239 (290)
T Consensus       146 i~~~l---~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~i~~ll~~i~~~l~~~ll~~a~SR~REy~AD~~Aa~ltg~p~  221 (288)
T PRK03982        146 IAATL---AGAIMYLANFASWGLWFGGGRDDDRN-GGNPIGSLLFIILAPIAATIIQLAISRTREFLADEGGARLSGNPI  221 (288)
T ss_pred             HHHHH---HHHHHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             99999---99999999999999997236666554-403999999999999999999998406679998599999839989


Q ss_pred             HHHHHHHHHHCC
Q ss_conf             999999999579
Q gi|255764488|r  240 IVKKALIAYMNG  251 (290)
Q Consensus       240 ~i~egi~~i~~g  251 (290)
T Consensus       222 ~LasAL~KL~~~  233 (288)
T PRK03982        222 ALANALTKLEKG  233 (288)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999841

Probab=94.28  E-value=0.41  Score=26.30  Aligned_cols=190  Identities=14%  Similarity=0.012  Sum_probs=116.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999741047447642074211455532355306202799999999999637898999999999999999
Q gi|255764488|r   76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIIL  155 (290)
Q Consensus        76 ~eli~~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~  155 (290)
T Consensus        83 i~~l~~la~~aRk~GllaLE~~~~~~~dpFl~----~gl~l~vdg~~~~~i~~iLe~e---------i~~-~~~r~~~~~  148 (272)
T PRK06926         83 VQTFVSLSEQARREGLLSLDAQLDEVKDPFLK----KGLLLAIDGWDEETIRDVMDSE---------IAA-MEERHRKGR  148 (272)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHH----HHHHHHHCCCCHHHHHHHHHHH---------HHH-HHHHHHHHH
T ss_conf             99999999999875676588765065787999----8899985899999999999999---------999-999998888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99621289999999998888899999999999961489789998666899999999999999999999999999999999
Q gi|255764488|r  156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH  235 (290)
Q Consensus       156 ~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~  235 (290)
T Consensus       149 ~~~~~~g~~aPafGmiGTviGLI~mL~~l~d-p~~iG---~~mAvALvtTlYGv~lAn~~f~PiA~KL~~~~~~e~~~~~  224 (272)
T PRK06926        149 RLFEKAGEFAPAWGMIGTLVGLVLMLKNLND-PHTLG---PNMAVALLTTLYGTLLANLVFIPIAAKLEEKTESEIFIKQ  224 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999872588799999999999881699-99998---8889999999999999999998899999988899999989


Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHC
Q ss_conf             999999999999957999689999983119967683889999999702
Q gi|255764488|r  236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY  283 (290)
Q Consensus       236 ~~~~~i~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e~~~~~~~~  283 (290)
T Consensus       225 miieGil~I~~g~nP~~ie~kL~sfL~p~~r~~~~~~~~~~~~~~~~~  272 (272)
T PRK06926        225 VMIEGIIGVQSGQNPRNLESQLVVFSSKEDWQKKRADRSKKKDRVHEA  272 (272)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCC
T ss_conf             999999998779984999999997499888866500056776553039