HHsearch alignment for GI: 255764488 and conserved domain: PRK06743

>PRK06743 flagellar motor protein MotP; Reviewed.
Probab=100.00  E-value=0  Score=514.13  Aligned_cols=249  Identities=19%  Similarity=0.277  Sum_probs=234.9

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHH---HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             99999999999999970998112---424899999999999999985898999999999999635788996668999999
Q gi|255764488|r    5 IGLFITILCIIGGFYAMGGNPYI---LIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL   81 (290)
Q Consensus         5 iGlv~~~~~I~~g~~~~GG~l~~---f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~eli~~   81 (290)
T Consensus         1 iGl~~g~~~v~~~~~l~gg~~~~l~~f~~~~s~lIV~GGt~~a~li~~~~~~i~~~~~~~~~~~~~~~~~---~~~~i~~   77 (254)
T PRK06743          1 VGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSIFTVLHRREED---LEQLTDL   77 (254)
T ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC---HHHHHHH
T ss_conf             9247999999999998187477887414705668457799999999778999999999999996677789---9999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999741047447642074211455532355306202799999999999637898999999999999999996212
Q gi|255764488|r   82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP  161 (290)
Q Consensus        82 l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~~  161 (290)
T Consensus        78 lv~la~~aRk~GllaLE~~~~~~~-----------------dpFl~~gl~l~vdG~-d~~~i~~~L~~ei~~~~~r~~~~  139 (254)
T PRK06743         78 FVDFSKKSKKHGLLSLEVDGEQVD-----------------NPFIQKGIRLMLSGY-DEDELKEVLMKDVETEVYELRKG  139 (254)
T ss_pred             HHHHHHHHHHCHHHHHHHHHCCCC-----------------CHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999985430877776532379-----------------889999999982799-99999999999999999999988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999998888899999999999961489789998666899999999999999999999999999999999999999
Q gi|255764488|r  162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV  241 (290)
Q Consensus       162 ~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~~~i  241 (290)
T Consensus       140 ~~v~~~~g~~APafGmiGTviGLI~mL~~l~d-p~~iG~~mAvAlvtTlYG~~lAnl~flPiA~KL~~~~~~e~~~~~mi  218 (254)
T PRK06743        140 AALLDKIGDFAPAWGMIGTLIGLIIMLQNLQD-TSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFV  218 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999764378899999999999872699-99998999999999999999999999999999998899999998999


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHH
Q ss_conf             9999999579996899999831199676838899
Q gi|255764488|r  242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI  275 (290)
Q Consensus       242 ~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e  275 (290)
T Consensus       219 iEGil~I~~genP~~ie~kL~sfL~~~~~~~~~~  252 (254)
T PRK06743        219 IEAISELYRGQIPSKLKLKLDTYVYETKIKKVKR  252 (254)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHC
T ss_conf             9999998879986999999998589576787761