HHsearch alignment for GI: 255764488 and conserved domain: PRK06926
>PRK06926 flagellar motor protein MotP; Reviewed.
Probab=100.00 E-value=0 Score=519.96 Aligned_cols=258 Identities=18% Similarity=0.241 Sum_probs=239.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 96899999999999999997099--8112424899999999999999985898999999999999635788996668999
Q gi|255764488|r 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78 (290)
Q Consensus 1 l~tIiGlv~~~~~I~~g~~~~GG--~l~~f~~~~sllIV~GGtlaA~li~~p~~~i~~~~~~l~~~f~~~~~~~~~~~el 78 (290)
T Consensus 6 ~~TiiGli~G~~~v~~~i~~g~~~~g~~~f~~~~s~lIV~GGtl~a~lis~p~~~i~~~~~~~~~~f~~~~~---~~~~~ 82 (272)
T PRK06926 6 YLTPVGFILGITILVLGIVSGSGLSGISSFIDLTSFFIVTGGLCAAVFISFSPKDLKKAPRVLKQAFIRQED---DVKEL 82 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC---CHHHH
T ss_conf 899999999999999999977537779999566179989989999999978999999999999998658888---99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999741047447642074211455532355306202799999999999637898999999999999999996
Q gi|255764488|r 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK 158 (290)
Q Consensus 79 i~~l~el~~~~Rk~GllaLE~~ie~p~~s~i~~~~~~~~~~~~~~~fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~ 158 (290)
T Consensus 83 i~~l~~la~~aRk~GllaLE~~~~~~~-----------------dpFl~~gl~l~vdg~-~~~~i~~iLe~ei~~~~~r~ 144 (272)
T PRK06926 83 VQTFVSLSEQARREGLLSLDAQLDEVK-----------------DPFLKKGLLLAIDGW-DEETIRDVMDSEIAAMEERH 144 (272)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHCCCC-----------------CHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999998756765887650657-----------------879998899985899-99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 21289999999998888899999999999961489789998666899999999999999999999999999999999999
Q gi|255764488|r 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238 (290)
Q Consensus 159 ~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d~p~~lG~~iA~ALitTlYGv~lAn~i~~Pia~kl~~~~~~e~~~~ 238 (290)
T Consensus 145 ~~~~~~~~~~g~~aPafGmiGTviGLI~mL~~l~d-p~~iG~~mAvALvtTlYGv~lAn~~f~PiA~KL~~~~~~e~~~~ 223 (272)
T PRK06926 145 RKGRRLFEKAGEFAPAWGMIGTLVGLVLMLKNLND-PHTLGPNMAVALLTTLYGTLLANLVFIPIAAKLEEKTESEIFIK 223 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88889999999872588799999999999881699-99998888999999999999999999889999998889999998
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHH
Q ss_conf 999999999957999689999983119967683889999999
Q gi|255764488|r 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280 (290)
Q Consensus 239 ~~i~egi~~i~~g~~P~~~~e~l~~~lp~~~r~~~~e~~~~~ 280 (290)
T Consensus 224 ~miieGil~I~~g~nP~~ie~kL~sfL~p~~r~~~~~~~~~~ 265 (272)
T PRK06926 224 QVMIEGIIGVQSGQNPRNLESQLVVFSSKEDWQKKRADRSKK 265 (272)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHH
T ss_conf 999999999877998499999999749988886650005677