HHsearch alignment for GI: 255764488 and conserved domain: TIGR02805
>TIGR02805 exbB2 tonB-system energizer ExbB; InterPro: IPR014172 Members of this protein family appear to be the ExbB protein of an ExbBD proton-transporting membrane complex that, by means of TonB, energizes transport by TonB-dependent receptors. Note that this family represents one of at least two distinct groups TolQ homologues designated ExbB - see also IPR014164 from INTERPRO. Each group associates with a distinct group of ExbD proteins, and a single species may have two ExbB/ExbD/TonB systems..
Probab=97.63 E-value=0.00012 Score=48.69 Aligned_cols=78 Identities=19% Similarity=0.432 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---C--CHHHHH
Q ss_conf 99999999996378989999999999999999962128999999999888889999999999996148---9--789998
Q gi|255764488|r 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---Q--SPKILG 199 (290)
Q Consensus 125 fl~~~l~~~v~g~~~~~~i~~~L~~ei~~~~~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~---d--~p~~lG 199 (290)
T Consensus 32 f~rk---i~v~~Y~~~~qld~dl~-----------~NlT~isiIgsNAPYiGLLGTVIGImvTFY~~G~gggdID~~~i~ 97 (139)
T TIGR02805 32 FYRK---IKVKRYEDVEQLDDDLS-----------RNLTVISIIGSNAPYIGLLGTVIGIMVTFYEMGLGGGDIDVKAIL 97 (139)
T ss_pred HHHC---CCHHCCCCHHHHHHHHH-----------CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 8740---22102146678999885-----------320411225002550125578999999888632566764511545
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 66689999999999999
Q gi|255764488|r 200 TAIGVSLTGTLLGIILS 216 (290)
Q Consensus 200 ~~iA~ALitTlYGv~lA 216 (290)
T Consensus 98 ~gLSLALKATALGlLVA 114 (139)
T TIGR02805 98 VGLSLALKATALGLLVA 114 (139)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 56128999999779999