BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|255764488|ref|YP_003065099.2| flagellar motor protein MotA
[Candidatus Liberibacter asiaticus str. psy62]
(290 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|255764488|ref|YP_003065099.2| flagellar motor protein MotA [Candidatus Liberibacter asiaticus
str. psy62]
gi|254547839|gb|ACT57159.2| flagellar motor protein MotA [Candidatus Liberibacter asiaticus
str. psy62]
Length = 290
Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS
Sbjct: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN
Sbjct: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA
Sbjct: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII
Sbjct: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS
Sbjct: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
>gi|315121853|ref|YP_004062342.1| flagellar motor protein MotA [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495255|gb|ADR51854.1| flagellar motor protein MotA [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 270
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/270 (80%), Positives = 249/270 (92%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
MGGN ILIQPFEI+IV+GAGLGGF+MAN LKVIKDSGV++LEIFGYK++ ++ YCD+LK
Sbjct: 1 MGGNLSILIQPFEIIIVSGAGLGGFIMANSLKVIKDSGVAILEIFGYKSIEKEIYCDILK 60
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
++Y+LMY+LKK SR E ENHIDDP+NS+IFTSIPT+L NNELTTFICDY RM+I+GNA+S
Sbjct: 61 IMYVLMYSLKKISRTELENHIDDPHNSSIFTSIPTILSNNELTTFICDYFRMVIIGNAQS 120
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
+EIE LMDEEI+IILYEKLKPYHAIS+MGES PAIGIVGAILGIIKAMGNLSQSPKILG
Sbjct: 121 HEIETLMDEEIEIILYEKLKPYHAISNMGESFPAIGIVGAILGIIKAMGNLSQSPKILGV 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
AIG SLTGT+LGI+LSY +CNPLTSQI S RL+QHRLYIIVKK LIAYMNGAIPQVAIEY
Sbjct: 181 AIGASLTGTMLGILLSYCICNPLTSQIHSIRLRQHRLYIIVKKTLIAYMNGAIPQVAIEY 240
Query: 261 GRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
GRKVLPL ERPSIEIV QEVL+Y+++KK S
Sbjct: 241 GRKVLPLFERPSIEIVEQEVLRYSNHKKES 270
>gi|15887906|ref|NP_353587.1| flagellar motor protein MotA [Agrobacterium tumefaciens str. C58]
gi|3914040|sp|Q44456|MOTA_AGRT5 RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|1480837|gb|AAC45321.1| MotA [Agrobacterium tumefaciens]
gi|2459706|gb|AAB71782.1| MotA [Agrobacterium tumefaciens]
gi|15155498|gb|AAK86372.1| flagellar motor protein [Agrobacterium tumefaciens str. C58]
Length = 290
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/290 (62%), Positives = 232/290 (80%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +IGL IT CIIGG+ AMGG+ +L+QPFE++I+ GAGLGGF+MANP+KV+KDSG +
Sbjct: 1 MNIVIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y DVL +LY LM +L+ SRNE E HID+P S+IF S P+VL+N
Sbjct: 61 LGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT+FICDY+R+II+GNARS+EIE LMDEEI+ IL++KLKPYHAI+ MG+S PAIGIV A
Sbjct: 121 ELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++SP++LG IG +L GT+LGIILSYS+CNPL SQ+K R KQHRLYII
Sbjct: 181 VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ LIAYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA 290
>gi|222084858|ref|YP_002543387.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
gi|221722306|gb|ACM25462.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
Length = 290
Score = 362 bits (928), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 222/290 (76%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T CIIG F AMGG+ L QPFE VI+AGAG+GGF+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFVVTCGCIIGSFMAMGGDVNALFQPFEFVIIAGAGIGGFIMANPMKVLKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P S IF + PTVL+N
Sbjct: 61 LGEAFRHAVPKERDYLDTLGVLYALMRDLRTKSRNEIEAHIDNPDESVIFQAAPTVLKNR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY+R+II+GNARS+EIE LMDEEI+ I ++K+KPYHAI+ MG+S PAIGIV A
Sbjct: 121 DLTAFICDYVRLIIIGNARSHEIEALMDEEINTIQHDKMKPYHAITIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM ++++SP++LG IG +L GT LGIILSYS+C PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMSHINESPEVLGHLIGSALVGTFLGIILSYSVCAPLVSQIKIVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISSYERPSIDAVEQEMMNPGGESKAA 290
>gi|116250475|ref|YP_766313.1| flagellar motor protein MotA [Rhizobium leguminosarum bv. viciae
3841]
gi|115255123|emb|CAK06197.1| putative chemotaxis motility protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 290
Score = 361 bits (927), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 220/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T C+IG F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCVIGSFMAMGGDVNALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF S PTVL+N
Sbjct: 61 LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|218461632|ref|ZP_03501723.1| flagellar motor protein MotA [Rhizobium etli Kim 5]
gi|218662603|ref|ZP_03518533.1| flagellar motor protein MotA [Rhizobium etli IE4771]
Length = 290
Score = 361 bits (926), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 219/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T C+IG F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCVIGSFMAMGGHVEALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF PTVL+N
Sbjct: 61 LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQQAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY LC+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCLCSPLVSQIKVVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|209547921|ref|YP_002279838.1| flagellar motor protein MotA [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533677|gb|ACI53612.1| chemotaxis motility protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 290
Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 220/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T C+IG F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCVIGSFMAMGGHVDALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF S PTVL+N
Sbjct: 61 LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKIVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|190890356|ref|YP_001976898.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
gi|190695635|gb|ACE89720.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
Length = 290
Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 219/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T C++G F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCVVGSFMAMGGHVEALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF PTVL+N
Sbjct: 61 LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQQAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|241203099|ref|YP_002974195.1| flagellar motor protein MotA [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856989|gb|ACS54656.1| chemotaxis motility protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 290
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T CI+G F AMGG L QPFE +I+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCIVGSFMAMGGEVDALFQPFEFLIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF S PTVL+N
Sbjct: 61 LSEAFRHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYH+I M +S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHSIQIMSDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|222147564|ref|YP_002548521.1| flagellar motor protein MotA [Agrobacterium vitis S4]
gi|221734552|gb|ACM35515.1| chemotaxis transmembrane protein [Agrobacterium vitis S4]
Length = 291
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/291 (61%), Positives = 233/291 (80%), Gaps = 1/291 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG IT+ CI+GGF AMGG+ +LIQPFE++I+ GAGLGGFVMANP+K++KDSG +
Sbjct: 1 MNIIIGFVITVGCILGGFMAMGGHLNVLIQPFELLIIGGAGLGGFVMANPMKIVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y DVL +LY LM +L+ SRNE E HID+P S+IF + P +L+N
Sbjct: 61 LGEAFKHAVPKERAYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQTAPNLLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT+FICDY+R+II+GNARS+EIE LMDEEI+ IL++K+KPYHAI+ MG+S PAIGIV A
Sbjct: 121 ELTSFICDYVRLIIIGNARSHEIEALMDEEINTILHDKMKPYHAITAMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++SP++LG IG +L GT+LGI LSYS+CNPLTSQIK R KQHRLYII
Sbjct: 181 VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIFLSYSVCNPLTSQIKIVRTKQHRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY-NHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ N+KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISSYERPSIDAVEQEMMNPGGGNEKAA 291
>gi|325291947|ref|YP_004277811.1| flagellar motor protein MotA [Agrobacterium sp. H13-3]
gi|45479282|gb|AAS66684.1| MotA [Agrobacterium sp. H13-3]
gi|325059800|gb|ADY63491.1| flagellar motor protein MotA [Agrobacterium sp. H13-3]
Length = 290
Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 180/290 (62%), Positives = 232/290 (80%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +IGL IT CIIGG+ AMGG+ +L+QPFE++I+ GAGLGGF+MANP+KV+KDSG +
Sbjct: 1 MNIVIGLIITFGCIIGGYMAMGGHLDVLVQPFELLIIGGAGLGGFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y DVL +LY LM +L+ SRNE E HID+P S+IF S P+VL+N
Sbjct: 61 LGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT+FICDY+R+II+GNARS+EIE LMDEEI+ IL++KLKPYHAI+ MG+S PAIGIV A
Sbjct: 121 ELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++SP++LG IG +L GT+LGIILSYS+CNPL SQ+K R KQHRLYII
Sbjct: 181 VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ LIAYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA 290
>gi|218513717|ref|ZP_03510557.1| flagellar motor protein MotA [Rhizobium etli 8C-3]
Length = 282
Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 165/282 (58%), Positives = 214/282 (75%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+T C++G F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +L E F +
Sbjct: 1 MTCGCVVGSFMAMGGHVEALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKALGEAFKHA 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ Y D L +LY LM +L+ SRNE E HID+P STIF PTVL+N ELT FICD
Sbjct: 61 VPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQQAPTVLKNKELTAFICD 120
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
Y+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A+LG+IKAM
Sbjct: 121 YVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAAVLGVIKAM 180
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+IVK+ L+AY
Sbjct: 181 AHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVIVKQTLLAY 240
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
MNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 MNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 282
>gi|150395477|ref|YP_001325944.1| flagellar motor protein MotA [Sinorhizobium medicae WSM419]
gi|150026992|gb|ABR59109.1| MotA/TolQ/ExbB proton channel [Sinorhizobium medicae WSM419]
Length = 292
Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 164/281 (58%), Positives = 223/281 (79%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+E F +K + Y D L +LY LM +L+ SRNE E+HID+P +S+IF S PTVL+N
Sbjct: 61 LVEAFKHKVPKERQYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEDSSIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEEIQTITHDKMKCYHALTSMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P++LG I +L GTLLG+ LSYS+ PL + IKS R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVLGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMM 281
>gi|12214187|emb|CAA11955.2| motA protein [Sinorhizobium meliloti]
Length = 292
Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/281 (58%), Positives = 221/281 (78%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F +K + Y D L +LY LM +L+ SRNE E+HID+P S+IF S PTVL+N
Sbjct: 61 LGEAFRHKVPKEREYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESSIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARSYEIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSYEIEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P++LG I +L GTLLG+ LSYS+ PL + IKS R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVLGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMM 281
>gi|15964407|ref|NP_384760.1| flagellar motor protein MotA [Sinorhizobium meliloti 1021]
gi|307311549|ref|ZP_07591190.1| flagellar motor protein MotA [Sinorhizobium meliloti BL225C]
gi|307318904|ref|ZP_07598335.1| flagellar motor protein MotA [Sinorhizobium meliloti AK83]
gi|17380459|sp|P97215|MOTA_RHIME RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|15073584|emb|CAC45226.1| Chemotaxis (motility protein A) transmembrane [Sinorhizobium
meliloti 1021]
gi|306895318|gb|EFN26073.1| flagellar motor protein MotA [Sinorhizobium meliloti AK83]
gi|306899566|gb|EFN30195.1| flagellar motor protein MotA [Sinorhizobium meliloti BL225C]
Length = 292
Score = 331 bits (848), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 164/281 (58%), Positives = 221/281 (78%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F +K + Y D L +LY LM +L+ SRNE E+HID+P S+IF S PTVL+N
Sbjct: 61 LGEAFRHKVPKEREYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESSIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P++LG I +L GTLLG+ LSYS+ PL + IKS R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVLGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMM 281
>gi|1842124|gb|AAB47573.1| membrane associated protein MotA [Sinorhizobium meliloti]
gi|1870713|gb|AAB48837.1| MotA [Sinorhizobium meliloti]
Length = 292
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/281 (58%), Positives = 221/281 (78%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F +K + Y D L +LY LM +L+ SRNE E+HID+P S+IF S PTVL+N
Sbjct: 61 LGEAFRHKVPKEREYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESSIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P+++G I +L GTLLG+ LSYS+ PL + IKS R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVVGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMM 281
>gi|153011532|ref|YP_001372746.1| flagellar motor protein MotA [Ochrobactrum anthropi ATCC 49188]
gi|151563420|gb|ABS16917.1| chemotaxis motA protein [Ochrobactrum anthropi ATCC 49188]
Length = 290
Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/290 (53%), Positives = 210/290 (72%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E VI+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFVIILGAALGTFFIANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S+IF + P+VL+
Sbjct: 61 CMEAFSNAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESSIFQAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RS+EIE LMDEEI I +KLKPYHA+ + E+LPA+GIV A
Sbjct: 121 DLTHFICDYCRLIIVGNVRSHEIEALMDEEIHTIARDKLKPYHAMVSISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVVGPIAAKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + +RP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYDRPTIDVVEQETMASAPTQQAA 290
>gi|239834450|ref|ZP_04682778.1| flagellar motor protein MotA [Ochrobactrum intermedium LMG 3301]
gi|239822513|gb|EEQ94082.1| flagellar motor protein MotA [Ochrobactrum intermedium LMG 3301]
Length = 328
Score = 328 bits (841), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 154/287 (53%), Positives = 208/287 (72%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+GL IT+ C++GGF AMGG+ +LIQP+E VI+ GA LG F +ANP ++KD+G + +E
Sbjct: 42 IVGLVITLGCMLGGFIAMGGHVSVLIQPWEFVIILGAALGTFFIANPFSLVKDTGRACME 101
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+ +LT
Sbjct: 102 AFSNAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFQAYPSVLKKEDLT 161
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FICDY R+IIVGN RS+EIE LMDEEI I +KLKPYHA+ + E+LPA+GIV A+LG
Sbjct: 162 NFICDYCRLIIVGNVRSHEIEALMDEEIHTIARDKLKPYHAMVSISEALPALGIVAAVLG 221
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+VK+
Sbjct: 222 VIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVVGPIAAKIKSTREKNNRLYIVVKQ 281
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
L+AYMNG++PQ+A+EYGRK + +RP+I++V QE + ++A+
Sbjct: 282 TLLAYMNGSLPQIAVEYGRKTISAYDRPTIDVVEQETMASAATQQAA 328
>gi|227820850|ref|YP_002824820.1| flagellar motor protein MotA [Sinorhizobium fredii NGR234]
gi|227339849|gb|ACP24067.1| chemotaxis protein motility protein A [Sinorhizobium fredii NGR234]
Length = 292
Score = 328 bits (840), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 163/281 (58%), Positives = 220/281 (78%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYLAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F +K + Y D L +LY LM +L+ SRNE E+HID+P S IF S PTVL+N
Sbjct: 61 LGEAFKHKVPKERHYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESPIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEEIHTITHDKMKCYHALTSMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P++LG I +L GTLLG+ LSYS+ PL + IK+ R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVLGAKIAAALVGTLLGVFLSYSIVGPLVANIKAVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMM 281
>gi|319781689|ref|YP_004141165.1| flagellar motor protein MotA [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167577|gb|ADV11115.1| flagellar motor protein MotA [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 291
Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/291 (53%), Positives = 212/291 (72%), Gaps = 1/291 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL +T+ C++GGF AMGG+ ++LIQP+E VI+ GA G F++ANP+K +KD+G
Sbjct: 1 MGILIGLVVTLGCVLGGFMAMGGHLHVLIQPWEAVIICGAAFGTFLVANPMKTVKDTGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+LE F + Y + L +L+ LM L+ SR+E E HID+P S IF + PTVL N+
Sbjct: 61 ILEAFKQAVPKEQDYLETLGVLHSLMRELRSKSRSEVEAHIDNPEESAIFQAFPTVLHNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+II+GNARS+EIE LMDEEI I +K+K YHA+ +G+ LPA+GIV A
Sbjct: 121 DLTHFICDYCRIIIIGNARSHEIEALMDEEIQTIRSDKMKAYHAMVAVGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG L QSP+ILG IG +L GT LGI LSYS+ P+ ++IK+ R K++RLYII
Sbjct: 181 VLGVVKAMGALDQSPEILGGLIGAALVGTFLGIFLSYSVVGPVATKIKTVREKKNRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH-NKKAS 290
VK+ L+AYMNGA+PQVAIE+GRK + ERP+I+ V Q + KKA+
Sbjct: 241 VKQTLLAYMNGALPQVAIEFGRKTISSYERPTIDAVEQSTMNTGTVEKKAA 291
>gi|182679716|ref|YP_001833862.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635599|gb|ACB96373.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 296
Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/281 (55%), Positives = 210/281 (74%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG I + C++GGF AMGG+ ++ QP+E VI+ G+ LG F++AN + IKD+G +
Sbjct: 1 MGFLIGTIIAVGCMLGGFAAMGGHIVVIWQPWEFVIICGSALGTFIVANNVLTIKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E K+L Q Y DVL +LY LM ++ +RNE E H+D+P STIF + P VL N
Sbjct: 61 LGEAIMDKSLKQRDYLDVLGVLYTLMREMRGKARNEVEEHVDNPEESTIFQNFPRVLANK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY R+II+GNAR++EIE LMDEEI+ IL++ LKPYHAI+ + ESLPA+GIV A
Sbjct: 121 ELTNFICDYCRLIIIGNARTHEIEALMDEEIETILHDTLKPYHAITIVAESLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI LSY L +PL ++I++TR KQ RLYII
Sbjct: 181 VLGVIKAMGALDQSPELLGGLIGSALVGTFAGIFLSYGLLSPLANKIRATREKQSRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+A+MNGA+PQ+A+E+GRK + ++RPSI+IV E +
Sbjct: 241 VKQTLLAFMNGAMPQIALEHGRKTISSADRPSIDIVENETV 281
>gi|260466627|ref|ZP_05812815.1| flagellar motor protein MotA [Mesorhizobium opportunistum WSM2075]
gi|259029633|gb|EEW30921.1| flagellar motor protein MotA [Mesorhizobium opportunistum WSM2075]
Length = 291
Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/290 (52%), Positives = 212/290 (73%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL +T+ C++GGF AMGG+ ++L+QP+E V++ GA LG F++ANP+K +KD+G
Sbjct: 1 MGILIGLVVTLGCVLGGFMAMGGHLHVLVQPWEAVVICGAALGTFLVANPMKTVKDTGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+LE F + Y + L +L+ LM L+ SR+E E HID+P S IF + PTVL+N+
Sbjct: 61 ILEAFKQAVPKEQDYLETLGVLHSLMRELRSKSRSEVEAHIDNPEESAIFQAFPTVLKNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICDY R+II+GNARS+EIE LMDEEI I +K+K YHA+ +G+ LPA+GIV A
Sbjct: 121 DLMAFICDYCRIIIIGNARSHEIEALMDEEIQTIKSDKMKAYHALVAVGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG L QSP+ILG IG +L GT LGI LSY++ P+ ++IK+ R K++RLYII
Sbjct: 181 VLGVVKAMGALDQSPEILGGLIGAALVGTFLGIFLSYAVVGPVATKIKTVREKKNRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGA+PQVAIE+GRK + ERP+I+ V Q + +K +
Sbjct: 241 VKQTLLAYMNGALPQVAIEFGRKTISSYERPTIDAVEQSTMNTGAAEKKA 290
>gi|13472568|ref|NP_104135.1| flagellar motor protein MotA [Mesorhizobium loti MAFF303099]
gi|14023314|dbj|BAB49921.1| flagellar motor protein; MotA [Mesorhizobium loti MAFF303099]
Length = 291
Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/290 (52%), Positives = 212/290 (73%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL +T+ C++GGF AMGG+ ++L+QP+E V++ GA LG F++ANP+K +KD+G
Sbjct: 1 MGILIGLVVTLGCVLGGFMAMGGHLHVLVQPWEAVVICGAALGTFLVANPMKTVKDTGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+LE F + Y + L +L+ LM L+ SR+E E HID+P S IF + PTVL+N+
Sbjct: 61 ILEAFKQAVPKEQDYLETLGVLHSLMRELRSKSRSEVEAHIDNPEESAIFQAFPTVLKNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICDY R+II+GNARS+EIE LMDEEI I +K+K YHA+ +G+ LPA+GIV A
Sbjct: 121 DLMNFICDYCRIIIIGNARSHEIEALMDEEIQTIRSDKMKAYHALVAVGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG L QSP+ILG IG +L GT LGI LSY++ P+ ++IK+ R K++RLYII
Sbjct: 181 VLGVVKAMGALDQSPEILGGLIGAALVGTFLGIFLSYAVVGPVATKIKTVREKKNRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGA+PQVAIE+GRK + ERP+I+ V Q + +K +
Sbjct: 241 VKQTLLAYMNGALPQVAIEFGRKTISSYERPTIDAVEQSTMNTGSAEKKA 290
>gi|23499889|ref|NP_699329.1| flagellar motor protein MotA [Brucella suis 1330]
gi|254702554|ref|ZP_05164382.1| flagellar motor protein MotA [Brucella suis bv. 3 str. 686]
gi|254706316|ref|ZP_05168144.1| flagellar motor protein MotA [Brucella pinnipedialis M163/99/10]
gi|254711392|ref|ZP_05173203.1| flagellar motor protein MotA [Brucella pinnipedialis B2/94]
gi|256014916|ref|YP_003104925.1| flagellar motor protein [Brucella microti CCM 4915]
gi|256029978|ref|ZP_05443592.1| flagellar motor protein MotA [Brucella pinnipedialis M292/94/1]
gi|23463464|gb|AAN33334.1| chemotaxis motA protein [Brucella suis 1330]
gi|255997576|gb|ACU49263.1| flagellar motor protein [Brucella microti CCM 4915]
Length = 290
Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|256059631|ref|ZP_05449828.1| flagellar motor protein MotA [Brucella neotomae 5K33]
Length = 290
Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAT 290
>gi|261323601|ref|ZP_05962798.1| flagellar motor protein MotA [Brucella neotomae 5K33]
gi|261299581|gb|EEY03078.1| flagellar motor protein MotA [Brucella neotomae 5K33]
Length = 296
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAT 296
>gi|260568538|ref|ZP_05839007.1| flagellar motor protein [Brucella suis bv. 4 str. 40]
gi|261313763|ref|ZP_05952960.1| flagellar motor protein MotA [Brucella pinnipedialis M163/99/10]
gi|261318998|ref|ZP_05958195.1| flagellar motor protein MotA [Brucella pinnipedialis B2/94]
gi|261753132|ref|ZP_05996841.1| flagellar motor protein MotA [Brucella suis bv. 3 str. 686]
gi|265986999|ref|ZP_06099556.1| flagellar motor protein MotA [Brucella pinnipedialis M292/94/1]
gi|294853150|ref|ZP_06793822.1| chemotaxis protein MotA [Brucella sp. NVSL 07-0026]
gi|306841069|ref|ZP_07473792.1| flagellar motor protein MotA [Brucella sp. BO2]
gi|260155203|gb|EEW90284.1| flagellar motor protein [Brucella suis bv. 4 str. 40]
gi|261298221|gb|EEY01718.1| flagellar motor protein MotA [Brucella pinnipedialis B2/94]
gi|261302789|gb|EEY06286.1| flagellar motor protein MotA [Brucella pinnipedialis M163/99/10]
gi|261742885|gb|EEY30811.1| flagellar motor protein MotA [Brucella suis bv. 3 str. 686]
gi|264659196|gb|EEZ29457.1| flagellar motor protein MotA [Brucella pinnipedialis M292/94/1]
gi|294818805|gb|EFG35805.1| chemotaxis protein MotA [Brucella sp. NVSL 07-0026]
gi|306288907|gb|EFM60210.1| flagellar motor protein MotA [Brucella sp. BO2]
Length = 296
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|161620212|ref|YP_001594098.1| flagellar motor protein MotA [Brucella canis ATCC 23365]
gi|163844321|ref|YP_001621976.1| flagellar motor protein MotA [Brucella suis ATCC 23445]
gi|161337023|gb|ABX63327.1| chemotaxis motA protein [Brucella canis ATCC 23365]
gi|163675044|gb|ABY39154.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 323
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/287 (53%), Positives = 207/287 (72%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G + +E
Sbjct: 37 IVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRACME 96
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+ +LT
Sbjct: 97 AFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKEDLT 156
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A+LG
Sbjct: 157 NFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAAVLG 216
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+VK+
Sbjct: 217 VIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIVVKQ 276
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 277 TLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 323
>gi|306846300|ref|ZP_07478861.1| flagellar motor protein MotA [Brucella sp. BO1]
gi|306273295|gb|EFM55164.1| flagellar motor protein MotA [Brucella sp. BO1]
Length = 323
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/287 (53%), Positives = 207/287 (72%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G + +E
Sbjct: 37 IVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRACME 96
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+ +LT
Sbjct: 97 AFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEFHIDNPKESPIFLAYPSVLKKEDLT 156
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A+LG
Sbjct: 157 NFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAAVLG 216
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+VK+
Sbjct: 217 VIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIVVKQ 276
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 277 TLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 323
>gi|254699437|ref|ZP_05161265.1| flagellar motor protein MotA [Brucella suis bv. 5 str. 513]
Length = 290
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++ QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVAEQETMASVPTQQAA 290
>gi|148558032|ref|YP_001257192.1| flagellar motor protein MotA [Brucella ovis ATCC 25840]
gi|148369317|gb|ABQ62189.1| chemotaxis motA protein [Brucella ovis ATCC 25840]
Length = 339
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/287 (53%), Positives = 207/287 (72%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G + +E
Sbjct: 53 IVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRACME 112
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+ +LT
Sbjct: 113 AFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKEDLT 172
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A+LG
Sbjct: 173 NFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAAVLG 232
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+VK+
Sbjct: 233 VIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIVVKQ 292
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 293 TLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 339
>gi|256111965|ref|ZP_05452916.1| flagellar motor protein MotA [Brucella melitensis bv. 3 str. Ether]
Length = 290
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE L ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETLASVPTQQAA 290
>gi|62317078|ref|YP_222931.1| flagellar motor protein MotA [Brucella abortus bv. 1 str. 9-941]
gi|83269071|ref|YP_418362.1| flagellar motor protein MotA [Brucella melitensis biovar Abortus
2308]
gi|225685987|ref|YP_002733959.1| flagellar motor protein MotA [Brucella melitensis ATCC 23457]
gi|254691433|ref|ZP_05154687.1| flagellar motor protein MotA [Brucella abortus bv. 6 str. 870]
gi|254698367|ref|ZP_05160195.1| flagellar motor protein MotA [Brucella abortus bv. 2 str. 86/8/59]
gi|254731812|ref|ZP_05190390.1| flagellar motor protein MotA [Brucella abortus bv. 4 str. 292]
gi|256043049|ref|ZP_05445994.1| flagellar motor protein MotA [Brucella melitensis bv. 1 str. Rev.1]
gi|256256619|ref|ZP_05462155.1| flagellar motor protein MotA [Brucella abortus bv. 9 str. C68]
gi|62197271|gb|AAX75570.1| chemotaxis motA protein [Brucella abortus bv. 1 str. 9-941]
gi|82939345|emb|CAJ12292.1| Flagellar motor protein MotA [Brucella melitensis biovar Abortus
2308]
gi|225642092|gb|ACO02005.1| chemotaxis motA protein [Brucella melitensis ATCC 23457]
Length = 290
Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|254720631|ref|ZP_05182442.1| flagellar motor protein MotA [Brucella sp. 83/13]
Length = 290
Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKP+ A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPHQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|306837355|ref|ZP_07470234.1| flagellar motor protein MotA [Brucella sp. NF 2653]
gi|306407547|gb|EFM63747.1| flagellar motor protein MotA [Brucella sp. NF 2653]
Length = 323
Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 207/287 (72%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G + +E
Sbjct: 37 IVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRACME 96
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+ +LT
Sbjct: 97 AFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKEDLT 156
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FICDY R+IIVGN RSYEIE LMDEEI I +KLKP+ A+ + E+LPA+GIV A+LG
Sbjct: 157 NFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPHQAMITISEALPALGIVAAVLG 216
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+VK+
Sbjct: 217 VIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIVVKQ 276
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 277 TLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 323
>gi|265985675|ref|ZP_06098410.1| flagellar motor protein MotA [Brucella sp. 83/13]
gi|264664267|gb|EEZ34528.1| flagellar motor protein MotA [Brucella sp. 83/13]
Length = 296
Score = 322 bits (824), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 153/290 (52%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKP+ A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPHQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|261749888|ref|ZP_05993597.1| flagellar motor protein MotA [Brucella suis bv. 5 str. 513]
gi|261739641|gb|EEY27567.1| flagellar motor protein MotA [Brucella suis bv. 5 str. 513]
Length = 296
Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++ QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVAEQETMASVPTQQAA 296
>gi|265993414|ref|ZP_06105971.1| flagellar motor protein MotA [Brucella melitensis bv. 3 str. Ether]
gi|262764284|gb|EEZ10316.1| flagellar motor protein MotA [Brucella melitensis bv. 3 str. Ether]
Length = 296
Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE L ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETLASVPTQQAA 296
>gi|17989454|ref|NP_542087.1| flagellar motor protein MotA [Brucella melitensis bv. 1 str. 16M]
gi|189022345|ref|YP_001932086.1| flagellar motor protein MotA [Brucella abortus S19]
gi|297249976|ref|ZP_06933677.1| chemotaxis protein MotA [Brucella abortus bv. 5 str. B3196]
gi|17985333|gb|AAL54351.1| chemotaxis mota protein [Brucella melitensis bv. 1 str. 16M]
gi|189020919|gb|ACD73640.1| flagellar motor protein [Brucella abortus S19]
gi|297173845|gb|EFH33209.1| chemotaxis protein MotA [Brucella abortus bv. 5 str. B3196]
Length = 323
Score = 321 bits (823), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 206/287 (71%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G + +E
Sbjct: 37 IVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRACME 96
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+ +LT
Sbjct: 97 AFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKEDLT 156
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A+L
Sbjct: 157 NFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAAVLS 216
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+VK+
Sbjct: 217 VIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIVVKQ 276
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 277 TLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 323
>gi|225628601|ref|ZP_03786635.1| flagellar motor protein MotA [Brucella ceti str. Cudo]
gi|225616447|gb|EEH13495.1| flagellar motor protein MotA [Brucella ceti str. Cudo]
Length = 339
Score = 321 bits (823), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 207/287 (72%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G + +E
Sbjct: 53 IVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRACME 112
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+ +LT
Sbjct: 113 AFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKEDLT 172
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A+LG
Sbjct: 173 NFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAAVLG 232
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+VK+
Sbjct: 233 VIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIVVKQ 292
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
L+AYMNG++PQ+A+EYGRK + ERP+I++V Q+ + ++A+
Sbjct: 293 TLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQKTMASVPTQQAA 339
>gi|260544319|ref|ZP_05820140.1| flagellar motor protein [Brucella abortus NCTC 8038]
gi|260564281|ref|ZP_05834766.1| flagellar motor protein [Brucella melitensis bv. 1 str. 16M]
gi|260757051|ref|ZP_05869399.1| flagellar motor protein MotA [Brucella abortus bv. 6 str. 870]
gi|260759578|ref|ZP_05871926.1| flagellar motor protein MotA [Brucella abortus bv. 4 str. 292]
gi|260762822|ref|ZP_05875154.1| flagellar motor protein MotA [Brucella abortus bv. 2 str. 86/8/59]
gi|260882861|ref|ZP_05894475.1| flagellar motor protein MotA [Brucella abortus bv. 9 str. C68]
gi|265989487|ref|ZP_06102044.1| flagellar motor protein MotA [Brucella melitensis bv. 1 str. Rev.1]
gi|265999227|ref|ZP_05465419.2| flagellar motor protein [Brucella melitensis bv. 2 str. 63/9]
gi|260097590|gb|EEW81464.1| flagellar motor protein [Brucella abortus NCTC 8038]
gi|260151924|gb|EEW87017.1| flagellar motor protein [Brucella melitensis bv. 1 str. 16M]
gi|260669896|gb|EEX56836.1| flagellar motor protein MotA [Brucella abortus bv. 4 str. 292]
gi|260673243|gb|EEX60064.1| flagellar motor protein MotA [Brucella abortus bv. 2 str. 86/8/59]
gi|260677159|gb|EEX63980.1| flagellar motor protein MotA [Brucella abortus bv. 6 str. 870]
gi|260872389|gb|EEX79458.1| flagellar motor protein MotA [Brucella abortus bv. 9 str. C68]
gi|263000156|gb|EEZ12846.1| flagellar motor protein MotA [Brucella melitensis bv. 1 str. Rev.1]
gi|263092724|gb|EEZ16933.1| flagellar motor protein [Brucella melitensis bv. 2 str. 63/9]
gi|326410313|gb|ADZ67377.1| flagellar motor protein MotA [Brucella melitensis M28]
gi|326553606|gb|ADZ88245.1| flagellar motor protein MotA [Brucella melitensis M5-90]
Length = 296
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|254695268|ref|ZP_05157096.1| flagellar motor protein MotA [Brucella abortus bv. 3 str. Tulya]
Length = 290
Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEI+ LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIDALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|237816640|ref|ZP_04595632.1| flagellar motor protein MotA [Brucella abortus str. 2308 A]
gi|237787453|gb|EEP61669.1| flagellar motor protein MotA [Brucella abortus str. 2308 A]
Length = 339
Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 206/287 (71%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G + +E
Sbjct: 53 IVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRACME 112
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+ +LT
Sbjct: 113 AFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKEDLT 172
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A+L
Sbjct: 173 NFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAAVLS 232
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+VK+
Sbjct: 233 VIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIVVKQ 292
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 293 TLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 339
>gi|254711991|ref|ZP_05173802.1| flagellar motor protein MotA [Brucella ceti M644/93/1]
gi|254715061|ref|ZP_05176872.1| flagellar motor protein MotA [Brucella ceti M13/05/1]
Length = 290
Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K + LYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNCLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|110632664|ref|YP_672872.1| flagellar motor protein MotA [Mesorhizobium sp. BNC1]
gi|110283648|gb|ABG61707.1| flagellar motor protein MotA [Chelativorans sp. BNC1]
Length = 295
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 147/281 (52%), Positives = 208/281 (74%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL +T+ C+IGGF AMGG+ +LIQP+E+VI+ GA LG F++ANP+ +KD+G +
Sbjct: 1 MGILLGLVVTLGCVIGGFMAMGGHLEVLIQPWELVIIGGAALGTFLVANPMSTVKDAGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LE F ++ + Y + L +L+ LM L+ SR+E E HID+P S IF + PTVL+N
Sbjct: 61 CLEAFKHQVPKETEYLETLGVLHSLMRELRSKSRSEVEAHIDNPEESAIFQAFPTVLKNY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+II+GNAR +EIE LMDEEI I +KLK YHA+ + + LPA+GIV A
Sbjct: 121 DLTHFICDYCRLIIIGNARPFEIEALMDEEIQTIRRDKLKSYHALQAVADGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG +G +L GT LGI LSY++ P+ +++K R K++RLY+I
Sbjct: 181 VLGVIKAMGALDQSPEVLGALVGAALVGTFLGIFLSYAVIGPIATKVKIVREKKNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+AYMNG++PQVA+E+GRK + +RPSI+ V Q+ L
Sbjct: 241 VKQTLLAYMNGSLPQVALEFGRKTISAYDRPSIDAVEQKTL 281
>gi|261215634|ref|ZP_05929915.1| flagellar motor protein MotA [Brucella abortus bv. 3 str. Tulya]
gi|260917241|gb|EEX84102.1| flagellar motor protein MotA [Brucella abortus bv. 3 str. Tulya]
Length = 296
Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEI+ LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIDALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|261216768|ref|ZP_05931049.1| flagellar motor protein MotA [Brucella ceti M13/05/1]
gi|261319635|ref|ZP_05958832.1| flagellar motor protein MotA [Brucella ceti M644/93/1]
gi|260921857|gb|EEX88425.1| flagellar motor protein MotA [Brucella ceti M13/05/1]
gi|261292325|gb|EEX95821.1| flagellar motor protein MotA [Brucella ceti M644/93/1]
Length = 296
Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K + LYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNCLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|323139661|ref|ZP_08074703.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
gi|322395093|gb|EFX97652.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
Length = 291
Score = 311 bits (797), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 145/282 (51%), Positives = 208/282 (73%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS IIGL +T+ C++GGF A+GG+ +L QP+E VI+ G+ LG F++ANP+KVIKD+G +
Sbjct: 1 MSFIIGLIVTMGCMLGGFAALGGHLIVLWQPWEFVIIMGSALGTFIVANPVKVIKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ K + Y D+L LL+ LM L+ +RNE E HID P S +FT+ P VL+N
Sbjct: 61 VVQAVLEKTPKRRDYLDILGLLHALMRELRSKARNEVEVHIDQPSESPLFTAFPNVLKNT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E+TTFICDY R+ I+GN +++EIE+LMDEE+ I ++KLKPYHA++ +G+ LPA+GIV A
Sbjct: 121 EITTFICDYCRLYIIGNVKTFEIESLMDEEMAEIKHDKLKPYHALTAIGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG ++ GT GI +SY + PL ++K R K+ +Y+I
Sbjct: 181 VLGVIKAMGALDQSPELLGGLIGAAMVGTFAGIFVSYGIMTPLAYKVKVARSKECHVYLI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K+ L+A+MNGA+PQVAIE+GRK +P ERP+I+ V E L
Sbjct: 241 IKQTLLAFMNGALPQVAIEHGRKSIPSHERPTIDEVENETLS 282
>gi|296447446|ref|ZP_06889371.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296255066|gb|EFH02168.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 289
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/282 (52%), Positives = 198/282 (70%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +GL IT+ C+ GGF A+GG+ +L QP+E VI+ G+ LG FV+ANP KVI DSG +
Sbjct: 1 MGFFVGLIITMGCMFGGFAALGGHLVVLWQPWEFVIIMGSSLGTFVIANPTKVIIDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K Y DVL LL+ LM L+ RNE E H+D+P S IFT+ P VLEN
Sbjct: 61 IGQAIMGKGPKHRDYLDVLGLLHALMRELRSKPRNEVEAHVDNPAESKIFTAFPKVLENK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E+T FICDY R+ I+GN R++EIE LMDEEI I Y++LKPYHA++ +G+ LPA+GIV A
Sbjct: 121 EMTAFICDYCRLFIIGNVRTFEIEALMDEEIAAIRYDRLKPYHALTSVGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG ++ GT GI +SY + PL +IK R K+ LY+I
Sbjct: 181 VLGVIKAMGALDQSPELLGGLIGAAMVGTFAGIFVSYGVITPLAFKIKVARTKECHLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K+ L+A+MNG +PQVA+E+GRK +P ERP+I+ V E L
Sbjct: 241 IKQTLLAFMNGGMPQVAVEHGRKSIPSYERPTIDEVENETLS 282
>gi|86356305|ref|YP_468197.1| flagellar motor protein MotA [Rhizobium etli CFN 42]
gi|86280407|gb|ABC89470.1| chemotaxis motility protein [Rhizobium etli CFN 42]
Length = 244
Score = 308 bits (788), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 144/244 (59%), Positives = 187/244 (76%)
Query: 47 MANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
MANP+KV+KDSG +L E F + + Y D L +LY LM +L+ SRNE E HID+P
Sbjct: 1 MANPMKVVKDSGKALAEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAE 60
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
STIF PTVL+N ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI
Sbjct: 61 STIFQQAPTVLKNKELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQ 120
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ 226
MG+S PAIGIV A+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQ
Sbjct: 121 IMGDSFPAIGIVAAVLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQ 180
Query: 227 IKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
IK R KQHRLY+IVK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++
Sbjct: 181 IKVVRNKQHRLYVIVKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGE 240
Query: 287 KKAS 290
KA+
Sbjct: 241 NKAA 244
>gi|27381993|ref|NP_773522.1| flagellar motor protein MotA [Bradyrhizobium japonicum USDA 110]
gi|27355163|dbj|BAC52147.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
Length = 349
Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 201/279 (72%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+ +G+FIT+ ++GGF AMGG+ +L+QP+E VI+ G +G F++ANP K + D+GV+ +
Sbjct: 54 SFVGIFITVAALLGGFAAMGGHLAVLMQPWEFVIIMGTAVGTFIVANPWKTVVDTGVACM 113
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ GQ Y D+L L+ LM L+ RNE E HIDDP +S IF + P+VL + L
Sbjct: 114 QAITGAVPGQRYYLDLLGALHALMRELRGKGRNEVEAHIDDPASSEIFKAFPSVLGDPSL 173
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
FICDY+R+II+GNAR++EIE LMDEEI I+ KL PYH++ + E+LPA+GIV A+L
Sbjct: 174 LQFICDYVRLIIMGNARTHEIEALMDEEIHTIVKGKLAPYHSLVTVSEALPALGIVAAVL 233
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+IKAMG L QSPK+LG IG +L GT GI LSY + +P +IK TR K+ R YIIVK
Sbjct: 234 GVIKAMGALDQSPKLLGGFIGAALVGTFAGIFLSYGIISPFAIKIKMTREKKCRPYIIVK 293
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+ L+A+MNGA+PQ+A+E+GRK++ SERPSI++V E +
Sbjct: 294 QTLLAFMNGAMPQIAVEHGRKMISSSERPSIDVVENETI 332
>gi|90418399|ref|ZP_01226311.1| chemotaxis protein motA [Aurantimonas manganoxydans SI85-9A1]
gi|90338071|gb|EAS51722.1| chemotaxis protein motA [Aurantimonas manganoxydans SI85-9A1]
Length = 285
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/281 (50%), Positives = 198/281 (70%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL +T+ C++GGF AMGG+ +L+QPFE VI+ G+ +G F++ANP KV+KD+G +
Sbjct: 1 MGILVGLIVTLSCLLGGFVAMGGHLGVLVQPFEYVIILGSSIGTFLVANPTKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E F K Q+ Y VL LL+ LM ++ SR E E HID+P S IF + P ++++
Sbjct: 61 IKEAFANKVPTQNDYLKVLALLHQLMREMRSKSRGEVEAHIDEPKESPIFQAYPELMKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY R+II+GNAR +EIE LM+EEI I ++LKP HA+ M + LPA+GIV A
Sbjct: 121 SLVHFICDYCRLIIIGNARPHEIEALMEEEIQTISSDRLKPKHALQDMADGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ +++KS R K R+++I
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVVGPVATKVKSVREKNIRVFVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
V+ LIAYMNGAIPQVA+EYGRK + +RPSI+ V E +
Sbjct: 241 VRSTLIAYMNGAIPQVALEYGRKTISAYDRPSIDQVETETI 281
>gi|163758007|ref|ZP_02165095.1| flagellar motor protein MotA [Hoeflea phototrophica DFL-43]
gi|162284296|gb|EDQ34579.1| flagellar motor protein MotA [Hoeflea phototrophica DFL-43]
Length = 290
Score = 301 bits (771), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 155/290 (53%), Positives = 213/290 (73%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG IT+ C++GG+ AMGG +L QPFE+VI+ GAG+GGF+M+NP KVIKD+ +
Sbjct: 1 MNMIIGFVITLGCVLGGYMAMGGKLGVLNQPFELVIIGGAGIGGFIMSNPTKVIKDTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F K + Y D L +LY LM +L+ SRNE E HID+P S +F PTVLEN
Sbjct: 61 LGEAFKNKVPKEREYLDTLSILYALMRDLRTKSRNEIEAHIDNPDESELFLLAPTVLENK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT+FICDY+R+II+GNAR +EIE LMDEEI I ++LK Y+A+S + ++ PAIGI+ A
Sbjct: 121 ELTSFICDYVRLIIIGNARPHEIEALMDEEIQTISTDRLKAYNAMSTLSDAFPAIGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++SP++LG IG +L GT+LGI L Y + +P+ + IK R KQ+RLY I
Sbjct: 181 VLGVIKAMGAITESPEVLGGLIGAALVGTMLGIFLCYCVVSPVATNIKIVRTKQNRLYTI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+E+GRK + ERPSI+ V QE++ +A+
Sbjct: 241 VKQTLLAYMNGSVPQVALEHGRKTISSYERPSIDAVEQEMMNPGGGGQAA 290
>gi|300024615|ref|YP_003757226.1| flagellar motor protein MotA [Hyphomicrobium denitrificans ATCC
51888]
gi|299526436|gb|ADJ24905.1| flagellar motor protein MotA [Hyphomicrobium denitrificans ATCC
51888]
Length = 306
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 198/273 (72%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ +IGLFIT+ C++GGF AMGG+ ++ QP+E VI+ GA LG FV+ANP+K IKD G +
Sbjct: 13 VTILIGLFITLACMLGGFTAMGGHVMVIWQPWEYVIICGAALGTFVVANPMKTIKDCGTA 72
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F D + ++L LL+ +M L+ SR E E ID P +S +F P+V N+
Sbjct: 73 TTQAFRNDVPTMDEHIELLSLLFFMMRELRDKSRAEMEMIIDAPQDSEVFKRSPSVTAND 132
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELTTFICDY R+II+GNAR++EIE+LMDEEI+ ++KLK YHA+ +G+ LPA+GI+ A
Sbjct: 133 ELTTFICDYFRLIIMGNARTHEIESLMDEEIETARHDKLKAYHALVAVGDGLPALGIIAA 192
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG + QSP+ILG I +L GT GI SY++ PL +++K R K+ R Y+I
Sbjct: 193 VLGVVKAMGAIDQSPEILGHLIASALVGTFAGIFFSYAVVGPLATKVKIVREKRLRSYVI 252
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK++L+A+MNGA+PQVAIE+GRK + ERP+I
Sbjct: 253 VKQSLLAFMNGAMPQVAIEHGRKAISAYERPTI 285
>gi|217976216|ref|YP_002360363.1| MotA/TolQ/ExbB proton channel [Methylocella silvestris BL2]
gi|217501592|gb|ACK49001.1| MotA/TolQ/ExbB proton channel [Methylocella silvestris BL2]
Length = 323
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/281 (49%), Positives = 201/281 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ +IG +T+ C++GGF AMGG+ ++ QP+E VI+ G LG F++AN L IKD+G +
Sbjct: 31 LAFLIGTIVTLGCMLGGFAAMGGHLSVIFQPWEFVIILGVSLGTFIIANSLATIKDTGAA 90
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ + + Y DVL +LY LM L+ +R+E E H+D+P S IF + P VL +
Sbjct: 91 IVDAVLDRGPTERDYLDVLGVLYTLMRELRGKARSEVEQHVDNPAESAIFKNFPKVLADV 150
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT+FICDY R+II+GNAR++EIE LMDEEI + ++KLKPYHA+ + + LPAIGIV A
Sbjct: 151 NLTSFICDYCRLIIIGNARTHEIEALMDEEIHTLTHDKLKPYHALQSVADGLPAIGIVAA 210
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG L QSP+ILG IG +L GT GI +SY + +PL +IK R + RLYII
Sbjct: 211 VLGVVKAMGALDQSPEILGGLIGAALIGTFAGIFVSYGVVSPLAHKIKVARAVRCRLYII 270
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+A+MNGA+PQ+A+E+GRK + +RPSI++V E +
Sbjct: 271 VKQTLLAFMNGAMPQIALEHGRKTIASHDRPSIDMVENETV 311
>gi|121602234|ref|YP_989407.1| lateral flagellar motor protein MotA [Bartonella bacilliformis
KC583]
gi|120614411|gb|ABM45012.1| lateral flagellar motor protein MotA [Bartonella bacilliformis
KC583]
Length = 301
Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/291 (47%), Positives = 203/291 (69%), Gaps = 1/291 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S IIGL IT+ CI+GG+ AMGG+ +L+QP+E VI+ G+ +G F+++ P VIKD+ +
Sbjct: 11 LSVIIGLIITLGCILGGYVAMGGHLDVLMQPWEFVIIVGSAIGAFIVSTPFPVIKDTLKA 70
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
E Q + L LLY LM ++ SR+E E+HID+P ST+F P VL+++
Sbjct: 71 TTEALTDAVPKQKDFLATLGLLYTLMREMRSKSRSEMESHIDNPKESTLFQQYPLVLKDD 130
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I + KPY A+ +M ++LPA+GIV A
Sbjct: 131 SLTNFICDYCRLIVMGNTRPFEIEALMDEEIHTISSDSQKPYQAMQNMADALPALGIVAA 190
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++ P++LG IG +L GT GI SYS+ P+ ++IK+ R K+ R+YI+
Sbjct: 191 VLGVIKAMGAITEPPEVLGHLIGAALVGTFAGIFFSYSIFGPIATKIKAVRSKKTRIYIV 250
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ-YNHNKKAS 290
VK+ L+AYMNGAIPQ+A+EYGRK + +RP+I++V Q + ++ KKA
Sbjct: 251 VKQTLLAYMNGAIPQIALEYGRKTISAKDRPTIDVVEQHAISGHSAEKKAD 301
>gi|319409194|emb|CBI82838.1| Chemotaxis protein motA [Bartonella schoenbuchensis R1]
Length = 291
Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 138/281 (49%), Positives = 201/281 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL +T+ CIIGG+ AMGG+ +L+QP+E VI+ G+ +G F+++NP VIKD+ +
Sbjct: 1 MGVIIGLVLTLGCIIGGYVAMGGHLDVLVQPWEFVIILGSAIGIFIVSNPFSVIKDAMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LE Q + L LLY+LM ++ SR+E E H+D+P S +F P VL+++
Sbjct: 61 TLEATTDAVPKQKDFLATLGLLYVLMREMRSKSRSEMEGHVDNPRESALFQQYPLVLKDS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT+FICDY R+II+GNAR +EIE LMDEEI I+ + K HA+ +M ++LPA+GIV A
Sbjct: 121 SLTSFICDYCRLIIMGNARPFEIEALMDEEIHTIVKDSEKSSHALQNMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S+ P++LG IG +L GT GI SYS+ +P+ ++IK+ R K+ R+YI+
Sbjct: 181 VLGVIKAMGAISEPPEVLGRLIGAALVGTFAGIFFSYSVFSPIATKIKTVRHKKTRIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+AYMNGAIPQ+A+EYGRK + +RP+I++V Q +
Sbjct: 241 VKQTLLAYMNGAIPQIALEYGRKTISAKDRPTIDVVEQHTI 281
>gi|118589945|ref|ZP_01547349.1| flagellar motor protein MotA [Stappia aggregata IAM 12614]
gi|118437442|gb|EAV44079.1| flagellar motor protein MotA [Stappia aggregata IAM 12614]
Length = 298
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 199/281 (70%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +IGL I +IGGF A+GG +L QP+E+VI+ G +G FV+ANP+KVIK + V+
Sbjct: 1 MTILIGLIIAGASLIGGFAALGGKVSVLWQPWELVIILGVAIGAFVVANPMKVIKGTLVA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + Y DVL LLY LM L+ RN+ E HI+DP S IF P+VL N
Sbjct: 61 VSDALRNAVPNKREYLDVLALLYGLMRELRAKGRNQVEPHIEDPNTSPIFQKYPSVLRNA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LTTFICDY R+IIVGNAR++EIE L+DEE+ I +++KPYHA+S + ++LPAIGI+ A
Sbjct: 121 SLTTFICDYFRLIIVGNARAHEIEALVDEELQTIHRDQMKPYHAMSSIADALPAIGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG + QSP++LG+ IG +L GT +GI SYSL P+ S+I++ R + R YI+
Sbjct: 181 VLGVIKAMGAIDQSPQLLGSLIGAALVGTFVGIFFSYSLFGPIASKIRNVRENRLRTYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+A+MNGA PQ+A+E+GRK + +RP+I+ V E +
Sbjct: 241 VKQTLLAFMNGADPQIALEHGRKTISDYDRPTIDEVENETM 281
>gi|328545469|ref|YP_004305578.1| Chemotaxis transmembrane protein [polymorphum gilvum SL003B-26A1]
gi|326415210|gb|ADZ72273.1| Chemotaxis transmembrane protein [Polymorphum gilvum SL003B-26A1]
Length = 300
Score = 294 bits (753), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/281 (50%), Positives = 196/281 (69%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ I+GL I + +IGGF A+GG +L QP+E+VI+ G LG F +ANP+K I D+ S
Sbjct: 1 MTIILGLIIAAVSLIGGFAALGGKVAVLWQPWELVIIIGVALGTFFVANPMKAIVDTLRS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
E + Y DVL LLY LM L+ RNE E HI++P S IF S PTV N+
Sbjct: 61 TREAVFNAVPKKRDYLDVLALLYALMRELRAKGRNEVEPHIENPQESEIFRSFPTVYRNS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TF+CDY R+I+VGNAR++EIE LMDEE+ I ++LKPY+A+S + E+LPAIGIV A
Sbjct: 121 GLLTFVCDYFRLILVGNARAHEIEALMDEELQTIHRDQLKPYYALSALAEALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG + QSP+ILG+ IG +L GT +GI LSY+L P+ ++K R + R YII
Sbjct: 181 VLGVIKAMGAIDQSPQILGSLIGAALVGTFVGIFLSYALVAPVAHKVKGVREHRLRPYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK++L+A+MNGA PQ+A+E+GRK + +RP+I+ V E +
Sbjct: 241 VKQSLLAFMNGAPPQIALEHGRKTISAYDRPTIDEVENETM 281
>gi|114706760|ref|ZP_01439660.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
gi|114537708|gb|EAU40832.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
Length = 287
Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 197/281 (70%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G+ + + C++GGF AMGG+ +L+QPFE VI+ G+ G F++ANP KVIKD G +
Sbjct: 1 MGILLGMVVVLGCLLGGFVAMGGHLGVLVQPFEYVIICGSSFGTFLVANPPKVIKDCGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E F Q Y ++L LL+ +M ++ SR+E E H+D P STIF + PT+L++
Sbjct: 61 IGEAFKNAVPKQKDYLEILGLLHAMMREMRSKSRSEVEAHVDAPEESTIFQAYPTILKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FICDY+R+IIVG+ARS+EIE LM+EEI+ I ++ +KP A+ + + LPA+GIV A
Sbjct: 121 QKVNFICDYVRLIIVGSARSHEIEALMEEEIETITHDAMKPKAALQDVADGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP+ILG I +L GT G+ SY + P+ S++KS R K+ R Y++
Sbjct: 181 VLGVIKAMGALDQSPEILGGLIAAALVGTFAGVFFSYGVMGPIASKVKSVREKKCRTYVV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K LIAYMNGA+PQVAIEYGRK + +RP+I+ V E +
Sbjct: 241 IKSTLIAYMNGAMPQVAIEYGRKTISAYDRPTIDQVEAETI 281
>gi|254505141|ref|ZP_05117292.1| hypothetical protein SADFL11_5181 [Labrenzia alexandrii DFL-11]
gi|222441212|gb|EEE47891.1| hypothetical protein SADFL11_5181 [Labrenzia alexandrii DFL-11]
Length = 297
Score = 288 bits (736), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 136/270 (50%), Positives = 192/270 (71%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+IGGF AMGG +L QP+E+VI+ G +G F++ANP+KVI + V++ + +
Sbjct: 13 SLIGGFAAMGGKVLVLWQPWELVIILGVAIGAFIVANPVKVILGTTVAVSDALRNAVPSK 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
Y DVL LLY LM L+ RN E HI+DP S IF P+VL + +TTFICDY R+
Sbjct: 73 RDYLDVLALLYGLMRELRAKGRNAVEPHIEDPSTSPIFQKYPSVLRDANMTTFICDYFRL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
IIVGNAR++EIE L+DEEI I +++KPYHA+S + ++LPAIGI+ A+LG+IKAMG +
Sbjct: 133 IIVGNARAHEIEALVDEEIQTIHRDQMKPYHAMSSVADALPAIGIIAAVLGVIKAMGAID 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
QSP++LG+ IG +L GT +GI+ SYSL PL ++IKS R + R YI+VK+ L+A+MNGA
Sbjct: 193 QSPQLLGSLIGAALVGTFIGILFSYSLFGPLAAKIKSVRETRLRNYIVVKQTLLAFMNGA 252
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
PQ+A+E+GRK + +RP+I+ V E ++
Sbjct: 253 DPQIALEHGRKTISGYDRPTIDEVENETMR 282
>gi|170741397|ref|YP_001770052.1| chemotaxis MotA protein [Methylobacterium sp. 4-46]
gi|168195671|gb|ACA17618.1| chemotaxis MotA protein [Methylobacterium sp. 4-46]
Length = 290
Score = 287 bits (735), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 146/290 (50%), Positives = 200/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL I + +IGGF A GG+ ++ QP+E VI+ G +G FV+ANP+K + DSG
Sbjct: 1 MGVLIGLVIALGAMIGGFLAEGGHLAVIWQPWEFVIIGGMAIGTFVIANPMKTVVDSGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LLE + + Y +L LL+ LM LK RNE E H+DDP NS+IF + P +L+N
Sbjct: 61 LLEAVTDRVPKRKDYLSLLGLLHALMRELKAKPRNEVEPHLDDPANSSIFKNYPDILKNL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY R+I++GNAR +EIE LMDEEI + LKPY +IS + E+LPA+GIV A
Sbjct: 121 ELTMFICDYARLILIGNARPHEIEALMDEEIGTHKRDALKPYASISTVAEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ AMG L Q P +LG IG +L GTL GI LSY + PL S++K R KQ R+Y+I
Sbjct: 181 VLGIVNAMGALDQPPHVLGHLIGAALIGTLGGITLSYGILAPLASKVKMVRDKQTRVYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK++LIAYMNGA+PQ+A+E+GRK + L++RP+I+ V + ++A+
Sbjct: 241 VKQSLIAYMNGALPQIAVEHGRKGISLADRPTIDEVETATVGGGQQREAA 290
>gi|254473335|ref|ZP_05086732.1| chemotaxis MotA protein [Pseudovibrio sp. JE062]
gi|211957451|gb|EEA92654.1| chemotaxis MotA protein [Pseudovibrio sp. JE062]
Length = 294
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/281 (49%), Positives = 191/281 (67%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ ++GL I I IIGG+ AMGG +L QPFE++IV GA G FV+AN K IKD+G
Sbjct: 1 MNILVGLVIVIGSIIGGYVAMGGYMKVLWQPFELLIVGGAAFGTFVVANTFKTIKDTGRG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E + + D L +LY LM L+ RN+ E ID+P S +F P VL N
Sbjct: 61 IHEALMNAKPKKRDHLDTLSVLYGLMRTLRAKGRNDVEQIIDNPAESELFQRFPRVLANV 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT+FICDY R+II+GN R +EIE LMDEE+ + E++KPY A+S E+LPA+GIV A
Sbjct: 121 SLTSFICDYFRLIIIGNVRPHEIEALMDEELHTLGREEMKPYQALSIAAETLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+KAMG + Q P+ILG+ IG +L GT LGI LSY + +P+ +IKS R +++RLYI
Sbjct: 181 VLGIVKAMGAIDQEPEILGSLIGAALVGTFLGIFLSYGIVSPIAVKIKSIREQRYRLYIE 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ L+A+MNGA PQ+A+E+GRK + +RP+I+ V E +
Sbjct: 241 VKQTLLAFMNGAAPQIALEHGRKTIGADDRPTIDEVEAETM 281
>gi|163850085|ref|YP_001638128.1| chemotaxis MotA protein [Methylobacterium extorquens PA1]
gi|218528688|ref|YP_002419504.1| chemotaxis MotA protein [Methylobacterium chloromethanicum CM4]
gi|240137218|ref|YP_002961687.1| Chemotaxis protein MotA (Motility protein A) [Methylobacterium
extorquens AM1]
gi|254559230|ref|YP_003066325.1| chemotaxis protein MotA [Methylobacterium extorquens DM4]
gi|163661690|gb|ABY29057.1| chemotaxis MotA protein [Methylobacterium extorquens PA1]
gi|218520991|gb|ACK81576.1| chemotaxis MotA protein [Methylobacterium chloromethanicum CM4]
gi|240007184|gb|ACS38410.1| Chemotaxis protein MotA (Motility protein A) [Methylobacterium
extorquens AM1]
gi|254266508|emb|CAX22272.1| Chemotaxis protein MotA (Motility protein A) [Methylobacterium
extorquens DM4]
Length = 291
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/276 (51%), Positives = 193/276 (69%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL I I C++GGF AMGG+ ++ QP+E VI+ G G FV+ANP+K + DSG +
Sbjct: 1 MGILVGLVIAIGCMLGGFVAMGGHLIVIWQPWEFVIIFGMAAGTFVIANPMKTVVDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F K + + +L LL+ LM +LK RNE E H DDP NS IF + P V ++
Sbjct: 61 TMEAFTNKGPKRQDFLSLLGLLHALMRDLKTKPRNEVETHFDDPANSEIFKNYPEVTKDQ 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICDY R+I++GNARS+EIE LM+EEI KLKPY AI+ + E+LPA+GIV A
Sbjct: 121 DLVLFICDYCRLILIGNARSHEIEALMEEEIGTHKKYKLKPYAAINTVAEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+KAMG L QSP+ILG IG +L GT +G+ SY + PL +IK R KQ +Y I
Sbjct: 181 VLGIVKAMGALDQSPQILGGLIGAALVGTFIGVFASYGMLAPLAVKIKGVREKQCSVYTI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
VK++LIAYMNGA+PQVAIE+GRK + ++RP+I+ V
Sbjct: 241 VKQSLIAYMNGALPQVAIEHGRKGIAGADRPTIDEV 276
>gi|319405394|emb|CBI79013.1| Chemotaxis protein motA [Bartonella sp. AR 15-3]
Length = 291
Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/290 (47%), Positives = 198/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I I+GG+ AMGG+ +LIQP+E VI+ G+ +G F++ANP IKD+ +
Sbjct: 1 MGVIIGLVIIFGSILGGYVAMGGHIDVLIQPWEFVIILGSAIGTFIVANPFSAIKDTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E Q + +L LLY+LM ++ SR+E ENHID+P ST+F P +L++
Sbjct: 61 TIEAMKDAVPKQKDFLSLLGLLYVLMREMRSKSRSEMENHIDNPKESTLFQQYPLILKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I Y+ KPY A+ M ++LPA+GIV A
Sbjct: 121 SLTNFICDYCRLIVMGNTRHFEIEALMDEEIHTISYDSQKPYQAMQTMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG +S+ P++LG IG +L GT GI +Y + PL S+IK+ R K+ R+YI+
Sbjct: 181 VLGVVKAMGAISEPPEVLGHLIGAALVGTFAGIFFAYGIFGPLASKIKTVRNKKVRIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGAIPQ+AIEYGRK + +RP+I+++ Q + +K +
Sbjct: 241 VKQTLLAYMNGAIPQIAIEYGRKTISAKDRPTIDVMEQHAIAGQGTEKEA 290
>gi|188579890|ref|YP_001923335.1| chemotaxis MotA protein [Methylobacterium populi BJ001]
gi|179343388|gb|ACB78800.1| chemotaxis MotA protein [Methylobacterium populi BJ001]
Length = 291
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/276 (51%), Positives = 191/276 (69%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL I I C++GGF AMGG+ ++ QP+E VI+ G G FV+ANPLKV+ DSG +
Sbjct: 1 MGILVGLVIAIGCMLGGFVAMGGHLIVIWQPWEFVIIGGMAAGTFVIANPLKVVMDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F K + + +L LL+ LM LK RNE E H DDP NS IF + P V ++
Sbjct: 61 TMEAFTNKGPKRQDFLSLLGLLHALMRELKTKPRNEVETHFDDPANSEIFKNYPDVTKDQ 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICDY R+I++GNARS+EIE LM+EEI +LKPY AI+ + E+LPA+GIV A
Sbjct: 121 DLLLFICDYCRLILIGNARSHEIEALMEEEIGTHKKYRLKPYAAINTVAEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+KAMG L QSP+ILG IG +L GT G+ SY + PL ++K R KQ Y I
Sbjct: 181 VLGIVKAMGALDQSPQILGGLIGAALVGTFFGVFASYGVLAPLAIKVKGVREKQCAPYTI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
VK++LIAYMNGA+PQVAIE+GRK + ++RP+I+ V
Sbjct: 241 VKQSLIAYMNGALPQVAIEHGRKGIAGADRPTIDEV 276
>gi|319898629|ref|YP_004158722.1| Chemotaxis protein motA (Motility protein A) [Bartonella
clarridgeiae 73]
gi|319402593|emb|CBI76138.1| Chemotaxis protein motA (Motility protein A) [Bartonella
clarridgeiae 73]
Length = 291
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 199/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I CI+GG+ AMGG+ +LIQP+E VI+ G+ +G F+++NP IKD+ +
Sbjct: 1 MGVIIGLVIIFGCILGGYVAMGGHLDVLIQPWEFVIILGSAIGTFIVSNPFPAIKDTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E Q + +L LLY+LM ++ SR+E E HID+P ST+F P +L++
Sbjct: 61 TIEAMKDAVPKQKDFLALLGLLYVLMREMRSKSRSEMEGHIDNPKESTLFQQYPLILKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I ++ KPY A+ +M ++LPA+GIV A
Sbjct: 121 SLTNFICDYCRLIVMGNTRHFEIEALMDEEIHTISHDSQKPYQAMQNMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG +S+ P++LG IG +L GT GI +Y + P+ S+IK+ R K+ R+YI+
Sbjct: 181 VLGVVKAMGAISEPPEVLGHLIGAALVGTFAGIFFAYGIFGPIASKIKTVRNKKVRIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGAIPQ+A+EYGRK + +RP+I++V Q + +K +
Sbjct: 241 VKQTLLAYMNGAIPQIALEYGRKTISAKDRPTIDVVEQHAIAGQGTEKEA 290
>gi|319406969|emb|CBI80606.1| Chemotaxis protein motA [Bartonella sp. 1-1C]
Length = 291
Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 200/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I CI+GG+ AMGG+ +L+QP+E VI+ G+ +G F+++NP+ IKD+ +
Sbjct: 1 MGVIIGLIIIFGCILGGYVAMGGHLDVLVQPWEFVIILGSAIGTFIVSNPIPAIKDTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E Q + +L LLY+LM ++ S++E E H+D+P S +F P +L++
Sbjct: 61 TIEAMKDAVPKQKDFLSLLGLLYVLMREMRSKSKSEMEAHVDNPKESALFQQYPLILKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I Y+ KPY A+ +M ++LPA+GIV A
Sbjct: 121 SLTNFICDYCRLIVMGNTRHFEIEALMDEEIHTISYDSQKPYQAMQNMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG +S+ P++LG IG +L GT GI +Y + PL S+IK+ R K+ R+YI+
Sbjct: 181 VLGVVKAMGAISEPPEVLGHLIGAALVGTFAGIFFAYGIFGPLASKIKTVRNKKARIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGA+PQ+A+EYGRK + +RP+I+I+ Q + ++K +
Sbjct: 241 VKQTLLAYMNGAMPQIALEYGRKTISAKDRPTIDIMEQHAIASQGSEKEA 290
>gi|319403953|emb|CBI77541.1| Chemotaxis protein motA [Bartonella rochalimae ATCC BAA-1498]
Length = 291
Score = 278 bits (711), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 200/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I CI+GG+ AMGG+ +L+QP+E VI+ G+ +G F+++NP+ IKD+ +
Sbjct: 1 MGVIIGLIIIFGCILGGYVAMGGHLDVLVQPWEFVIILGSAIGTFIVSNPIPAIKDTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E Q + +L LLY+LM ++ S++E E H+D+P S +F P +L++
Sbjct: 61 TIEAMKDAVPKQKDFLSLLGLLYVLMREMRSKSKSEMEAHVDNPKESALFQQYPLILKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I Y+ KPY A+ +M ++LPA+GIV A
Sbjct: 121 SLTNFICDYCRLIVMGNTRPFEIEALMDEEIHTISYDSQKPYQAMQNMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG +S+ P++LG IG +L GT GI +Y + PL S+IK+ R K+ R+YI+
Sbjct: 181 VLGVVKAMGAISEPPEVLGHLIGAALVGTFAGIFFAYGIFGPLASKIKTVRNKKVRIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGA+PQ+A+EYGRK + +RP+I+I+ Q + ++K +
Sbjct: 241 VKQTLLAYMNGAMPQIALEYGRKTISAKDRPTIDIMEQHAIASQGSEKEA 290
>gi|304392512|ref|ZP_07374452.1| chemotaxis protein MotA [Ahrensia sp. R2A130]
gi|303295142|gb|EFL89502.1| chemotaxis protein MotA [Ahrensia sp. R2A130]
Length = 289
Score = 278 bits (711), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 189/268 (70%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
C++GG+ AMGG +L QP+E VI+ GA +G F++ANP+ V+KD+G L+E K G
Sbjct: 13 CVLGGYMAMGGKLMVLAQPWEFVIIGGAAIGTFLIANPMPVVKDTGKGLVEALKAKVPGP 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
D Y +L LL+ L+ ++ +E E HID P +S IF + P VL N +LT FICDY R+
Sbjct: 73 DDYLQILGLLHALLREMRTKPSSEVEGHIDAPEDSEIFKNYPVVLGNKDLTFFICDYCRL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
I+VGNARS+E+E LM+EEI I +E+++ HA++ +G+ LPA+GIV A+LG++KAMG +
Sbjct: 133 ILVGNARSHEVEALMEEEIHTIRHERMESVHALTVIGDGLPALGIVAAVLGVVKAMGAID 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
SP+ILG IG +L GT +GI LSY++ P+ ++K+ R R+Y + K+ LIA MNGA
Sbjct: 193 SSPEILGGLIGAALVGTFVGIFLSYAVVAPIAGKLKAVREAHLRVYFVAKQTLIASMNGA 252
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+PQ+A+E+GRK + +RPSI+ + +++
Sbjct: 253 VPQIALEFGRKAISGHDRPSIDQMEEQL 280
>gi|312115255|ref|YP_004012851.1| flagellar motor protein MotA [Rhodomicrobium vannielii ATCC 17100]
gi|311220384|gb|ADP71752.1| flagellar motor protein MotA [Rhodomicrobium vannielii ATCC 17100]
Length = 289
Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 131/290 (45%), Positives = 192/290 (66%), Gaps = 1/290 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +GLF+T+ C++ G+ MGG+ ++ QP E +I+ GA +G F++ANP+KVIKD+G
Sbjct: 1 MTIALGLFVTLGCMLAGYVWMGGHVAVIWQPAEYLIICGAAIGTFIVANPMKVIKDTGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ + Y VL LY LM K ++E E HIDDP S+IF + P VL
Sbjct: 61 IVDALKNSEPKESDYLAVLGFLYALMREFKNKPKSEVEKHIDDPSKSSIFANYPEVLAKP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+ I+GNAR EIE LMDEEI I ++ LKPYHA+ + E+ PA+GIV A
Sbjct: 121 DLTQFICDYARLHIMGNARPAEIEALMDEEIQTIRHDGLKPYHALHAVSEAFPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM L + P++LG I ++ GT GI LSY++ P+ +++K+ R KQ LY++
Sbjct: 181 VLGVIKAMAALDKPPEVLGELIASAMVGTFAGIFLSYAVVAPIATKLKTVREKQLHLYML 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ +A+MNGA+ VA+E+GRK++ ERP+I V +E L KA+
Sbjct: 241 VKQTFLAFMNGAMASVAVEHGRKMISAHERPTINRV-EESLTGTPEAKAA 289
>gi|115523170|ref|YP_780081.1| flagellar motor protein MotA [Rhodopseudomonas palustris BisA53]
gi|115517117|gb|ABJ05101.1| chemotaxis protein [Rhodopseudomonas palustris BisA53]
Length = 283
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/270 (50%), Positives = 190/270 (70%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
MGG+ ++ QP+E VI+ G LG +++ANP KV+ DSG ++++ Q Y D+L
Sbjct: 1 MGGHIGVIWQPWEFVIICGMALGTYIVANPWKVVLDSGTAVVQALTMAVPKQRHYLDLLG 60
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
LL+ LM ++ RNE E HIDDP +S IF + PTVL N LT F+ DY R++++G+AR
Sbjct: 61 LLHALMREVRNKGRNEVEAHIDDPASSEIFQNFPTVLANASLTGFVSDYFRLLVMGSARP 120
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
+EIE LMDEEI I+ K+KPY ++ + E LPA+GIV A+LG+IKAMG L QSPK+LG
Sbjct: 121 HEIEALMDEEIQTIVRSKMKPYSSMMMVAEGLPALGIVAAVLGVIKAMGALDQSPKLLGG 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
IG +L GT GI LSYSL PL +++K+ R +Q RLY+IVK+ L+A+MNGA+PQ+AIE+
Sbjct: 181 FIGSALVGTFAGIFLSYSLVAPLAAKVKAVREQQCRLYVIVKQTLLAFMNGALPQIAIEH 240
Query: 261 GRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
GRK++ +ERPSI++V E + K A+
Sbjct: 241 GRKMIGPNERPSIDVVESETISGGPAKAAA 270
>gi|170748129|ref|YP_001754389.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
gi|170654651|gb|ACB23706.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
Length = 295
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 189/276 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I + GGF+A+GG+ ++ QPFE +IV GA +G F++ANP V+ D+G +
Sbjct: 1 MGVIIGLLIAAASVGGGFWALGGHLTVVWQPFEFIIVGGAAIGAFIVANPAGVVLDTGSA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + ++ Y ++L LL+ L ++ RNE E H++ P S IF + P +
Sbjct: 61 LRDAVFARVPRREDYLELLGLLFALTREVRSKPRNEVEGHLERPGESEIFKAYPRAARDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY+R+II+GNAR Y++E LM+EEI +KLK Y+A+ + LPA+GIV A
Sbjct: 121 ALTLFICDYVRLIIIGNARPYDVEALMEEEIATHRRDKLKVYNALMITADGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
ILGI+KAMG L QSP +LG+ IG +L GT GI +SY++ P+ ++IK+TR Q RLYII
Sbjct: 181 ILGIVKAMGALDQSPALLGSLIGSALVGTFTGIFVSYTVVAPVANKIKATRESQARLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
VK+ L+AYMNGA+PQ+A+EYGRK + + RP+I+ V
Sbjct: 241 VKQTLLAYMNGALPQIAVEYGRKAITSANRPTIDEV 276
>gi|158422268|ref|YP_001523560.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
gi|158329157|dbj|BAF86642.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
Length = 296
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 191/281 (67%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G+ + + GGF AMGG+ ++ QPFE VI+ G F++ANP+ VIKD+G
Sbjct: 1 MMVLLGIVLGLGATFGGFMAMGGHLDVVWQPFEYVIIGGIAFSTFLIANPMSVIKDTGSG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ A + + +L LLY LM ++ RNE E HIDDP NS +F PT+L++
Sbjct: 61 IMHAMSGVAPKRKDFLALLGLLYALMREVRAKPRNEVEAHIDDPANSGLFAHFPTILKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT +ICDY R+II+GNA+S+EIE LM++EI I K KP A+ + E+LPA+GI A
Sbjct: 121 ELTQYICDYARLIIIGNAKSHEIEGLMEQEISTIKKHKTKPAAALGTVAEALPALGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+KAMG + QSP+ILG IG +L GT +GI SY++ +PL +IK TR KQ + +II
Sbjct: 181 VLGIVKAMGAIDQSPEILGHYIGSALIGTFVGIYSSYAIISPLAHKIKVTREKQCQPFII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK+ LIA+MNGA+PQ+A+E+GRK + ERP+I+ V E +
Sbjct: 241 VKQTLIAFMNGALPQIALEHGRKTIAEGERPTIDEVESEAI 281
>gi|90422601|ref|YP_530971.1| flagellar motor protein MotA [Rhodopseudomonas palustris BisB18]
gi|90104615|gb|ABD86652.1| chemotaxis protein [Rhodopseudomonas palustris BisB18]
Length = 281
Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 138/270 (51%), Positives = 191/270 (70%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
MGG+ ++ QP+E VI+ G LG +++ANP KV+ D+GV++++ Q Y D+L
Sbjct: 1 MGGHIGVIWQPWEFVIIGGMALGTYIVANPWKVVVDTGVAVVQALTMAVPQQRHYLDLLG 60
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
LL+ LM ++ RNE E HIDDP +S IF + PTVL N + +FICDY R+II+G+AR
Sbjct: 61 LLHSLMREVRNKGRNEVEGHIDDPASSEIFGNFPTVLANEAMVSFICDYFRLIIMGSARP 120
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
+EIE LMDEEI+ I+ KLKPY ++ + E LPA+GIV A+LG+IKAMG L QSPK+LG
Sbjct: 121 HEIEALMDEEIETIVRSKLKPYSSMMMVAEGLPALGIVAAVLGVIKAMGALDQSPKLLGG 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
IG +L GT GI LSY L PL +++KS R +Q R+YIIVK+ L+A+MNGA+PQ+AIE+
Sbjct: 181 FIGSALVGTFAGIFLSYGLVAPLAAKVKSVRERQCRMYIIVKQTLLAFMNGALPQIAIEH 240
Query: 261 GRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
GRK++ ERPSI++V E + K A+
Sbjct: 241 GRKMIGPGERPSIDVVENETISGGAAKAAT 270
>gi|82940567|emb|CAJ44295.1| putative Chemotaxis Motility protein A (MotA) [Rhizobium
leguminosarum bv. viciae]
Length = 177
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 143/177 (80%)
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
PTVL+N ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYH+I M +S P
Sbjct: 1 PTVLKNKELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHSIQIMSDSFP 60
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
AIGIV A+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R K
Sbjct: 61 AIGIVAAVLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNK 120
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
QHRLY+IVK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 121 QHRLYVIVKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 177
>gi|317403795|gb|EFV84275.1| chemotaxis protein MotA [Achromobacter xylosoxidans C54]
Length = 289
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 170/289 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I+ +IG F A+GG+ L QPFE+ ++ GA G F+ N K + +
Sbjct: 1 MLIVIGFLVVIVSVIGSFVALGGHMGALYQPFELTLIFGAAFGAFLAGNSKKSLMLVKKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G+D Y +++ LLY+L+ ++ E+HI+DP +S IF+ P + ++
Sbjct: 61 LPDTLKSSRYGKDVYMELMALLYVLLNKARREGLMAIESHIEDPASSPIFSEYPRIAKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P I M + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPASMIRQMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P ILG I ++ GT LGI+L+Y PL S+I+ + ++
Sbjct: 181 VLGVIKALAAVDQPPAILGDLISKAMVGTFLGILLAYGFVGPLASRIERRTDEAMKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+K L+A MNG PQ+A+E+GRKVL S RP+ + + V Q KA
Sbjct: 241 IKTTLLASMNGYPPQLAVEFGRKVLYSSVRPTFGELEEHVRQTKSTAKA 289
>gi|33592171|ref|NP_879815.1| flagellar motor protein MotA [Bordetella pertussis Tohama I]
gi|33596123|ref|NP_883766.1| flagellar motor protein MotA [Bordetella parapertussis 12822]
gi|33601522|ref|NP_889082.1| flagellar motor protein MotA [Bordetella bronchiseptica RB50]
gi|33571816|emb|CAE41325.1| chemotaxis protein MotA [Bordetella pertussis Tohama I]
gi|33573126|emb|CAE36771.1| chemotaxis protein MotA [Bordetella parapertussis]
gi|33575958|emb|CAE33037.1| chemotaxis protein MotA [Bordetella bronchiseptica RB50]
gi|332381587|gb|AEE66434.1| flagellar motor protein MotA [Bordetella pertussis CS]
Length = 291
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 172/282 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + IL ++G F +GG+ L QPFE+ ++AGA +G F+ N K + +
Sbjct: 1 MLIVIGYAVVILAVVGSFIGLGGHLGALYQPFELTLIAGAAVGAFMAGNSRKSLGLVAKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E F +D Y +++ LLY+L+ ++ E+HI+DP +S IF P ++++
Sbjct: 61 IPEAFRSSPYSKDVYMELMALLYVLLNKARREGLMAIESHIEDPLSSPIFNEYPRIMKDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P HA+ + ++LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPTHALQQVADALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P ILG I ++ GT LG++L+Y P+ ++I+ + ++
Sbjct: 181 VLGVIKALAAVDQPPAILGDLISKAMVGTFLGVLLAYGFVAPMAARIERRTSESVKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A MNG PQ+A+E+GRKVL + RPS + + V Q
Sbjct: 241 IKVTLLASMNGYPPQLAVEFGRKVLFSAVRPSFGELEEHVRQ 282
>gi|254250907|ref|ZP_04944225.1| Flagellar motor component [Burkholderia dolosa AUO158]
gi|124893516|gb|EAY67396.1| Flagellar motor component [Burkholderia dolosa AUO158]
Length = 286
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 170/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ LIQP EI+++AGAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALIQPVEILMIAGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|325525469|gb|EGD03282.1| flagellar motor protein MotA [Burkholderia sp. TJI49]
Length = 286
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 170/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++AGAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIAGAGVGAFILGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHVEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|221202106|ref|ZP_03575141.1| chemotaxis protein MotA [Burkholderia multivorans CGD2M]
gi|221209086|ref|ZP_03582081.1| chemotaxis protein MotA [Burkholderia multivorans CGD2]
gi|221171081|gb|EEE03533.1| chemotaxis protein MotA [Burkholderia multivorans CGD2]
gi|221177900|gb|EEE10312.1| chemotaxis protein MotA [Burkholderia multivorans CGD2M]
Length = 286
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 168/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++AGAGLG F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIAGAGLGAFILGNGTKTIKATVRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSPERPSFAELEEHV 280
>gi|261219995|ref|ZP_05934276.1| flagellar motor protein MotA [Brucella ceti B1/94]
gi|260918579|gb|EEX85232.1| flagellar motor protein MotA [Brucella ceti B1/94]
Length = 225
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 136/192 (70%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 34 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 93
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 94 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 153
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 154 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 213
Query: 181 ILGIIKAMGNLS 192
+LG+IKAMG L
Sbjct: 214 VLGVIKAMGALD 225
>gi|115350222|ref|YP_772061.1| flagellar motor protein MotA [Burkholderia ambifaria AMMD]
gi|171322725|ref|ZP_02911472.1| flagellar motor protein MotA [Burkholderia ambifaria MEX-5]
gi|115280210|gb|ABI85727.1| flagellar motor component-like protein [Burkholderia ambifaria
AMMD]
gi|171091927|gb|EDT37394.1| flagellar motor protein MotA [Burkholderia ambifaria MEX-5]
Length = 286
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 170/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK + +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMITGAGVGAFILGNGMKTIKATLLV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFTELEEHV 280
>gi|134294328|ref|YP_001118063.1| flagellar motor protein MotA [Burkholderia vietnamiensis G4]
gi|134137485|gb|ABO53228.1| chemotaxis MotA protein [Burkholderia vietnamiensis G4]
Length = 286
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 171/280 (61%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIVGAGVGAFILGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYNKDVYMELMGLLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEAPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL+S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLSSLAEQRVAEATKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFNELEEHV 280
>gi|221214226|ref|ZP_03587198.1| chemotaxis protein MotA [Burkholderia multivorans CGD1]
gi|221165881|gb|EED98355.1| chemotaxis protein MotA [Burkholderia multivorans CGD1]
Length = 286
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 168/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++AGAGLG F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIAGAGLGAFILGNGSKTIKATVRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSPERPSFAELEEHV 280
>gi|167587858|ref|ZP_02380246.1| flagellar motor protein MotA [Burkholderia ubonensis Bu]
Length = 286
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 169/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TIL + GG+ GG+ LIQP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTILSVFGGYALAGGHLGALIQPIEILMIVGAGVGAFILGNGMKTIKATLQV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYNKDVYMELMGLLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|206558532|ref|YP_002229292.1| flagellar motor protein MotA [Burkholderia cenocepacia J2315]
gi|198034569|emb|CAR50434.1| chemotaxis protein MotA [Burkholderia cenocepacia J2315]
Length = 286
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 170/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ LIQP EI+++AGAG+G F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALIQPVEILMIAGAGVGAFILGNGGKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPQKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILATLNGYAPAIAVEFGRKVLFSTERPSFSELEEHV 280
>gi|170703864|ref|ZP_02894554.1| flagellar motor component-like protein [Burkholderia ambifaria
IOP40-10]
gi|172059244|ref|YP_001806896.1| flagellar motor protein MotA [Burkholderia ambifaria MC40-6]
gi|170131225|gb|EDS99862.1| flagellar motor component-like protein [Burkholderia ambifaria
IOP40-10]
gi|171991761|gb|ACB62680.1| flagellar motor protein MotA [Burkholderia ambifaria MC40-6]
Length = 286
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 169/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMITGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFTELEEHV 280
>gi|161523342|ref|YP_001578354.1| flagellar motor protein MotA [Burkholderia multivorans ATCC 17616]
gi|189351885|ref|YP_001947513.1| flagellar motor protein MotA [Burkholderia multivorans ATCC 17616]
gi|160340771|gb|ABX13857.1| flagellar motor component-like protein [Burkholderia multivorans
ATCC 17616]
gi|189335907|dbj|BAG44977.1| chemotaxis MotA protein [Burkholderia multivorans ATCC 17616]
Length = 286
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 168/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++AGAG+G F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIAGAGIGAFILGNGSKTIKATVRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSPERPSFAELEEHV 280
>gi|209515723|ref|ZP_03264586.1| flagellar motor protein MotA [Burkholderia sp. H160]
gi|209503750|gb|EEA03743.1| flagellar motor protein MotA [Burkholderia sp. H160]
Length = 286
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 170/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++AGAGLG F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIAGAGLGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 IPTLFKGAKYNKDVYMELMGLLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALTKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|311105915|ref|YP_003978768.1| chemotaxis protein MotA [Achromobacter xylosoxidans A8]
gi|310760604|gb|ADP16053.1| chemotaxis protein MotA [Achromobacter xylosoxidans A8]
Length = 291
Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 168/282 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + + ++G F A+GG+ L QPFE+ ++ GA G F+ +N K + +
Sbjct: 1 MLIVIGFLVVAVSVVGSFIALGGHLGALYQPFELTLIFGAAFGAFLASNSKKSLMLVKAA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G+D Y +++ LLY+L+ ++ E+HI+DP +S IF+ P + ++
Sbjct: 61 LPDSLKSSRYGKDVYMELMALLYVLLNKARREGLMAIESHIEDPESSPIFSEYPRIAKDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P A+ M + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPVRALQQMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P ILG I ++ GT LGI+L+Y PL S+I + ++
Sbjct: 181 VLGVIKALAAVDQPPAILGDLISKAMVGTFLGILLAYGFVGPLASRIDRRSDEATKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A MNG PQ+A+E+GRKVL + RP+ + + V Q
Sbjct: 241 IKTTLLASMNGYPPQLAVEFGRKVLFSAVRPTFGELEEHVRQ 282
>gi|83719743|ref|YP_443679.1| flagellar motor protein MotA [Burkholderia thailandensis E264]
gi|167582719|ref|ZP_02375593.1| flagellar motor protein MotA [Burkholderia thailandensis TXDOH]
gi|167620833|ref|ZP_02389464.1| flagellar motor protein MotA [Burkholderia thailandensis Bt4]
gi|83653568|gb|ABC37631.1| chemotaxis MotA protein [Burkholderia thailandensis E264]
Length = 286
Score = 214 bits (546), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 170/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALVQPVEILMITGAGVGAFILGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYNKDIYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL+S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLSSLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|167564511|ref|ZP_02357427.1| flagellar motor protein MotA [Burkholderia oklahomensis EO147]
gi|167571660|ref|ZP_02364534.1| flagellar motor protein MotA [Burkholderia oklahomensis C6786]
Length = 286
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 169/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALVQPVEILMIVGAGVGAFILGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPSLFKGSKYNKDIYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL+S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLSSLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFTELEEHV 280
>gi|78064832|ref|YP_367601.1| flagellar motor protein MotA [Burkholderia sp. 383]
gi|77965577|gb|ABB06957.1| Flagellar motor component-like protein [Burkholderia sp. 383]
Length = 286
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 169/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ LIQP EI+++ GAG+G F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALIQPVEILMIVGAGVGAFILGNGGKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILATLNGYAPAIAVEFGRKVLFSTERPSFSELEEHV 280
>gi|186477723|ref|YP_001859193.1| flagellar motor protein MotA [Burkholderia phymatum STM815]
gi|184194182|gb|ACC72147.1| chemotaxis protein MotA [Burkholderia phymatum STM815]
Length = 286
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 170/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++AGAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALMQPVEVLMIAGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPQKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEAPAHALMKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|238025854|ref|YP_002910085.1| flagellar motor protein MotA [Burkholderia glumae BGR1]
gi|124695900|gb|ABN14294.1| MotA [Burkholderia glumae BGR1]
gi|124695930|gb|ABN14298.1| MotA [Burkholderia glumae BGR1]
gi|237875048|gb|ACR27381.1| MotA [Burkholderia glumae BGR1]
Length = 286
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 169/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK + +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIVGAGVGAFILGNGVKTIKATLLV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPPLFKSSKYTKALYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HMVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHVEGEGPAHALTRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +L
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKLLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|107024397|ref|YP_622724.1| flagellar motor protein MotA [Burkholderia cenocepacia AU 1054]
gi|116688277|ref|YP_833900.1| flagellar motor protein MotA [Burkholderia cenocepacia HI2424]
gi|170731590|ref|YP_001763537.1| flagellar motor protein MotA [Burkholderia cenocepacia MC0-3]
gi|254246759|ref|ZP_04940080.1| hypothetical protein BCPG_01519 [Burkholderia cenocepacia PC184]
gi|105894586|gb|ABF77751.1| flagellar motor component-like protein [Burkholderia cenocepacia AU
1054]
gi|116646366|gb|ABK07007.1| flagellar motor component-like protein [Burkholderia cenocepacia
HI2424]
gi|124871535|gb|EAY63251.1| hypothetical protein BCPG_01519 [Burkholderia cenocepacia PC184]
gi|169814832|gb|ACA89415.1| flagellar motor protein MotA [Burkholderia cenocepacia MC0-3]
Length = 286
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 168/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ LIQP EI+++ GAG+G F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALIQPVEILMIVGAGVGAFILGNGGKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILATLNGYAPAIAVEFGRKVLFSTERPSFSELEEHV 280
>gi|53720919|ref|YP_109905.1| flagellar motor protein MotA [Burkholderia pseudomallei K96243]
gi|53724324|ref|YP_104372.1| flagellar motor protein MotA [Burkholderia mallei ATCC 23344]
gi|67640464|ref|ZP_00439269.1| chemotaxis protein MotA [Burkholderia mallei GB8 horse 4]
gi|76810929|ref|YP_331497.1| flagellar motor protein MotA [Burkholderia pseudomallei 1710b]
gi|121600572|ref|YP_994716.1| flagellar motor protein MotA [Burkholderia mallei SAVP1]
gi|124383824|ref|YP_001027661.1| flagellar motor protein MotA [Burkholderia mallei NCTC 10229]
gi|126441486|ref|YP_001060852.1| flagellar motor protein MotA [Burkholderia pseudomallei 668]
gi|126448569|ref|YP_001082632.1| flagellar motor protein MotA [Burkholderia mallei NCTC 10247]
gi|126451764|ref|YP_001068159.1| flagellar motor protein MotA [Burkholderia pseudomallei 1106a]
gi|134281489|ref|ZP_01768197.1| chemotaxis protein MotA [Burkholderia pseudomallei 305]
gi|167000406|ref|ZP_02266220.1| chemotaxis MotA protein [Burkholderia mallei PRL-20]
gi|167721694|ref|ZP_02404930.1| flagellar motor protein MotA [Burkholderia pseudomallei DM98]
gi|167740672|ref|ZP_02413446.1| flagellar motor protein MotA [Burkholderia pseudomallei 14]
gi|167817883|ref|ZP_02449563.1| flagellar motor protein MotA [Burkholderia pseudomallei 91]
gi|167826261|ref|ZP_02457732.1| flagellar motor protein MotA [Burkholderia pseudomallei 9]
gi|167847769|ref|ZP_02473277.1| flagellar motor protein MotA [Burkholderia pseudomallei B7210]
gi|167896357|ref|ZP_02483759.1| flagellar motor protein MotA [Burkholderia pseudomallei 7894]
gi|167904731|ref|ZP_02491936.1| flagellar motor protein MotA [Burkholderia pseudomallei NCTC 13177]
gi|167913011|ref|ZP_02500102.1| flagellar motor protein MotA [Burkholderia pseudomallei 112]
gi|167920948|ref|ZP_02508039.1| flagellar motor protein MotA [Burkholderia pseudomallei BCC215]
gi|217424036|ref|ZP_03455536.1| chemotaxis protein MotA [Burkholderia pseudomallei 576]
gi|237814249|ref|YP_002898700.1| chemotaxis protein MotA [Burkholderia pseudomallei MSHR346]
gi|242317302|ref|ZP_04816318.1| chemotaxis protein MotA [Burkholderia pseudomallei 1106b]
gi|254174899|ref|ZP_04881560.1| chemotaxis MotA protein [Burkholderia mallei ATCC 10399]
gi|254183891|ref|ZP_04890482.1| chemotaxis protein MotA [Burkholderia pseudomallei 1655]
gi|254186367|ref|ZP_04892884.1| chemotaxis protein MotA [Burkholderia pseudomallei Pasteur 52237]
gi|254194544|ref|ZP_04900975.1| chemotaxis protein MotA [Burkholderia pseudomallei S13]
gi|254201445|ref|ZP_04907809.1| chemotaxis MotA protein [Burkholderia mallei FMH]
gi|254206787|ref|ZP_04913138.1| chemotaxis MotA protein [Burkholderia mallei JHU]
gi|254260914|ref|ZP_04951968.1| chemotaxis protein MotA [Burkholderia pseudomallei 1710a]
gi|254357190|ref|ZP_04973464.1| chemotaxis MotA protein [Burkholderia mallei 2002721280]
gi|52211333|emb|CAH37322.1| chemotaxis protein MotA [Burkholderia pseudomallei K96243]
gi|52427747|gb|AAU48340.1| chemotaxis MotA protein [Burkholderia mallei ATCC 23344]
gi|76580382|gb|ABA49857.1| chemotaxis MotA protein [Burkholderia pseudomallei 1710b]
gi|121229382|gb|ABM51900.1| chemotaxis MotA protein [Burkholderia mallei SAVP1]
gi|124291844|gb|ABN01113.1| chemotaxis protein MotA [Burkholderia mallei NCTC 10229]
gi|126220979|gb|ABN84485.1| chemotaxis protein MotA [Burkholderia pseudomallei 668]
gi|126225406|gb|ABN88946.1| chemotaxis protein MotA [Burkholderia pseudomallei 1106a]
gi|126241439|gb|ABO04532.1| chemotaxis protein MotA [Burkholderia mallei NCTC 10247]
gi|134247156|gb|EBA47242.1| chemotaxis protein MotA [Burkholderia pseudomallei 305]
gi|147747339|gb|EDK54415.1| chemotaxis MotA protein [Burkholderia mallei FMH]
gi|147752329|gb|EDK59395.1| chemotaxis MotA protein [Burkholderia mallei JHU]
gi|148026254|gb|EDK84339.1| chemotaxis MotA protein [Burkholderia mallei 2002721280]
gi|157934052|gb|EDO89722.1| chemotaxis protein MotA [Burkholderia pseudomallei Pasteur 52237]
gi|160695944|gb|EDP85914.1| chemotaxis MotA protein [Burkholderia mallei ATCC 10399]
gi|169651294|gb|EDS83987.1| chemotaxis protein MotA [Burkholderia pseudomallei S13]
gi|184214423|gb|EDU11466.1| chemotaxis protein MotA [Burkholderia pseudomallei 1655]
gi|217393099|gb|EEC33121.1| chemotaxis protein MotA [Burkholderia pseudomallei 576]
gi|237504138|gb|ACQ96456.1| chemotaxis protein MotA [Burkholderia pseudomallei MSHR346]
gi|238521180|gb|EEP84633.1| chemotaxis protein MotA [Burkholderia mallei GB8 horse 4]
gi|242140541|gb|EES26943.1| chemotaxis protein MotA [Burkholderia pseudomallei 1106b]
gi|243063601|gb|EES45787.1| chemotaxis MotA protein [Burkholderia mallei PRL-20]
gi|254219603|gb|EET08987.1| chemotaxis protein MotA [Burkholderia pseudomallei 1710a]
Length = 286
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 169/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALVQPVEILMIVGAGVGAFIIGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYNKDIYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|307731389|ref|YP_003908613.1| flagellar motor protein MotA [Burkholderia sp. CCGE1003]
gi|323527739|ref|YP_004229892.1| flagellar motor protein MotA [Burkholderia sp. CCGE1001]
gi|307585924|gb|ADN59322.1| flagellar motor protein MotA [Burkholderia sp. CCGE1003]
gi|323384741|gb|ADX56832.1| flagellar motor protein MotA [Burkholderia sp. CCGE1001]
Length = 286
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 170/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIVGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALTKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|170694366|ref|ZP_02885520.1| flagellar motor protein MotA [Burkholderia graminis C4D1M]
gi|187925788|ref|YP_001897430.1| flagellar motor protein MotA [Burkholderia phytofirmans PsJN]
gi|170140789|gb|EDT08963.1| flagellar motor protein MotA [Burkholderia graminis C4D1M]
gi|187716982|gb|ACD18206.1| flagellar motor protein MotA [Burkholderia phytofirmans PsJN]
Length = 286
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 170/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIVGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALNKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|91785661|ref|YP_560867.1| flagellar motor protein MotA [Burkholderia xenovorans LB400]
gi|296157482|ref|ZP_06840317.1| flagellar motor protein MotA [Burkholderia sp. Ch1-1]
gi|91689615|gb|ABE32815.1| Chemotaxis protein MotA [Burkholderia xenovorans LB400]
gi|295892254|gb|EFG72037.1| flagellar motor protein MotA [Burkholderia sp. Ch1-1]
Length = 286
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 169/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIVGAGIGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALNKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|330815145|ref|YP_004358850.1| MotA [Burkholderia gladioli BSR3]
gi|327367538|gb|AEA58894.1| MotA [Burkholderia gladioli BSR3]
Length = 286
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 168/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ LIQP E++++ GAG+G F++ N +K+IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALIQPLEVLMIVGAGVGAFILGNGIKMIKATLRL 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKSSKYTKALYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HMVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHVEVEGPAHALTRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +L
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRAAESTKLLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|295678084|ref|YP_003606608.1| flagellar motor protein MotA [Burkholderia sp. CCGE1002]
gi|295437927|gb|ADG17097.1| flagellar motor protein MotA [Burkholderia sp. CCGE1002]
Length = 286
Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 169/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++AGAGLG F++ N +K I+ +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIAGAGLGAFILGNGMKTIRATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P A++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAQALAKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADRPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|163856410|ref|YP_001630708.1| flagellar motor protein MotA [Bordetella petrii DSM 12804]
gi|163260138|emb|CAP42439.1| flagellar motor component MotA [Bordetella petrii]
Length = 291
Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 169/282 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + ++ +IG F A+GG+ L QPFE+ ++AG LG F+ N K + +
Sbjct: 1 MLIVIGYAVVLVAVIGSFAALGGHMGALYQPFELTLIAGGALGAFLAGNSRKSLALMRRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + ++ Y +++ LLY+L+ ++ E+HI+DP S IF+ P + +++
Sbjct: 61 LPQAIKGAPYSKEVYMELMALLYVLLNKARREGLMAIESHIEDPDASAIFSEYPRIRQDD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P H++ M + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPSHSLQQMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+G + Q +LG I ++ GT LG++L+Y PL S++ + ++
Sbjct: 181 VLGVIKALGAVDQPAAVLGDLISKAMVGTFLGVLLAYGFVAPLASRLDRRTSESVKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A MNG PQ+A+E+GRKVL + RPS + + V Q
Sbjct: 241 IKVTLLASMNGYPPQLAVEFGRKVLFSTVRPSFGELEEHVRQ 282
>gi|226193298|ref|ZP_03788908.1| chemotaxis protein MotA [Burkholderia pseudomallei Pakistan 9]
gi|254298790|ref|ZP_04966241.1| chemotaxis protein MotA [Burkholderia pseudomallei 406e]
gi|157808541|gb|EDO85711.1| chemotaxis protein MotA [Burkholderia pseudomallei 406e]
gi|225934898|gb|EEH30875.1| chemotaxis protein MotA [Burkholderia pseudomallei Pakistan 9]
Length = 278
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 166/272 (61%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK + L +F
Sbjct: 1 MTLLSVFGGYALAGGHLGALVQPVEILMIVGAGVGAFIIGNGIKTIKATLRVLPTLFKGS 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+D Y +++ LLY+L+ +K E IDDP S IFT P +L ++ + F+ D
Sbjct: 61 KYNKDIYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADHHIVEFLTD 120
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
Y+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A++G++ M
Sbjct: 121 YLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAAVMGVVHTM 180
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ + P +LG I +L GT LGI+LSY L PL S + + +++ +K ++A
Sbjct: 181 ASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQCIKVTILAS 240
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 LNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 272
>gi|167838310|ref|ZP_02465169.1| flagellar motor protein MotA [Burkholderia thailandensis MSMB43]
Length = 286
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 169/280 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALVQPVEILMIVGAGVGAFIIGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + +D Y +++ LLY+L+ +K E ID+P S IFT P +L ++
Sbjct: 61 LPTLLKGSKYNKDIYMELMALLYVLLAKARKEGTLTLEADIDEPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL+S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLSSLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A +NG P +A+E+GRKVL +ERPS + + V
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHV 280
>gi|293604984|ref|ZP_06687381.1| chemotaxis MotA protein [Achromobacter piechaudii ATCC 43553]
gi|292816812|gb|EFF75896.1| chemotaxis MotA protein [Achromobacter piechaudii ATCC 43553]
Length = 263
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 158/263 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I+ ++G F A+GG+ L QPFE+ ++ GA G F+ N K + +
Sbjct: 1 MLIVIGFLVVIVSVVGSFIALGGHLGALYQPFELTLIFGAAFGAFLAGNSKKSLMLVKKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + +D Y +++ LLY+L+ ++ E+HI+DP +S IF P + ++
Sbjct: 61 LPDALKSSRYSKDVYMELMALLYVLLNKARREGLMAIESHIEDPASSPIFGEYPRIAKDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P HA+ M + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPAHALQQMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P ILG I ++ GT LGI+L+Y PL S+++ + ++
Sbjct: 181 VLGVIKALAAVDQPPAILGDLISKAMVGTFLGILLAYGFVGPLASRVERRNDEAMKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRK 263
+K L+A MNG PQ+A+E+GRK
Sbjct: 241 IKTTLLASMNGYPPQLAVEFGRK 263
>gi|296103599|ref|YP_003613745.1| chemotaxis protein MotA [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058058|gb|ADF62796.1| chemotaxis protein MotA [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 313
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 172/283 (60%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+G + IL + GGF GGN L QP E++I+ GAG+G F++ N +K +K +G +L++
Sbjct: 19 IVGYLVVILTVFGGFLLSGGNLMALFQPLELLIIGGAGVGAFIVGNNVKSLKSTGKALVK 78
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
IF K + Y D++ L+++L+ + E I+DP NS IF++ P ++ + L
Sbjct: 79 IFVGKRYNKAVYMDLMALMFLLLSQSRVHGLMSLEKDIEDPQNSDIFSAYPRLMSDPMLA 138
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI DY R++I G+ S+EIE LMDEEI+ E P H+++ +G++ PA GIV A++G
Sbjct: 139 NFILDYFRLMIGGSMNSHEIEALMDEEIETCEEELEVPAHSLNTVGDAFPAFGIVAAVMG 198
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+G+ + LG IG +L GT LGI+++Y PL + ++ Q ++ +K
Sbjct: 199 VVNALGSADRPAAELGMLIGHALVGTFLGILIAYGFVLPLATLLRQKSSDQVKILQCIKV 258
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
L++ +NG PQ+A+E+GRK + SERPS E + + V + N
Sbjct: 259 TLLSSLNGYAPQIAVEFGRKTIFTSERPSFEELEEHVREVKSN 301
>gi|319944148|ref|ZP_08018426.1| chemotaxis MotA protein [Lautropia mirabilis ATCC 51599]
gi|319742642|gb|EFV95051.1| chemotaxis MotA protein [Lautropia mirabilis ATCC 51599]
Length = 285
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 159/282 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + +IGG+ GG+ L QP E++++ GA G F++ANP K +K +
Sbjct: 1 MFVIIGYIVVVASVIGGYAMAGGHVSALFQPLELLMIGGAAFGAFIVANPGKDLKACMAA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F ++ Y V+ +LY ++ +K EN ++ P +S +FT P +L ++
Sbjct: 61 LPSVFKGSKYTKERYLSVMAMLYDILSKARKEGLMAIENDVEQPESSPLFTRYPDLLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY+RM+I GN + EIENLMD E++ +E + P H+I M + LPA GIV A
Sbjct: 121 HLIEFVTDYLRMMISGNLNALEIENLMDNEMETHHHEAMVPAHSIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ Q P ILG I +L GT LGI+++Y PL + + +
Sbjct: 181 VMGVVHTMGSVGQPPAILGEMIAHALVGTFLGILMAYGFVGPLADVLTQKTNEAAKELQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK L+A M G P + +E+GRKVL +ERP + V Q
Sbjct: 241 VKVTLLASMQGYAPAICVEFGRKVLYSTERPGFAELEGHVKQ 282
>gi|120555690|ref|YP_960041.1| flagellar motor component [Marinobacter aquaeolei VT8]
gi|120325539|gb|ABM19854.1| flagellar motor component [Marinobacter aquaeolei VT8]
Length = 283
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 163/274 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + C++GG+ GGN +L QP EI+I+ GA +G F++ANPL +K+ +
Sbjct: 1 MLLIIGAVVVVACVLGGYVLHGGNLAVLWQPTEILIIGGAAVGSFIIANPLHTVKEVFQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + Y D+L LLY + +K E ID+P +S IF+ P ++++
Sbjct: 61 CIRLLTGSPFNKSYYMDLLSLLYEVFDKSRKQGVMAIEEDIDNPESSQIFSRYPAIMKSK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I GN +E+E +M+ EI+ +E +P HA++ + ++LP +GIV A
Sbjct: 121 HLLDFITDYLRIISSGNMAPHELEGMMENEIENRQHELEEPAHAVNKIADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG L++ P+ +G ++ +L GT LGI + Y P + ++ + + Y
Sbjct: 181 VLGIVITMGFLTEGPEKIGLSVAAALVGTFLGIWMGYGFVGPTSIALEHAAKYELKAYEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
VK A++A ++G PQ+AIE+GRK LP +RP +
Sbjct: 241 VKSAIVATVSGQAPQMAIEFGRKALPTEKRPGFQ 274
>gi|154253327|ref|YP_001414151.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
gi|154157277|gb|ABS64494.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
Length = 312
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 162/279 (58%), Gaps = 2/279 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ + +L + GG+ AMGG+ +L QPFE VI+ GA G F +ANP V+K G
Sbjct: 26 MRLIVGIAVVLLSVFGGYAAMGGHLEVLWQPFEAVIILGAAFGAFCIANPPSVLKAVGGI 85
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN-ETENHIDDPYNSTIFTSIPTVLEN 119
+F + + ++L L Y L + L K N E H+++P STIF P +
Sbjct: 86 FGTLFKGPRYDKAAFLELLGLQYTL-FKLAKSKGNLALEAHVENPGESTIFAQFPKFSAD 144
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ F+CDY+RMI +G ++E+E+LMDEE++ E+ + A+ + + PA+GIV
Sbjct: 145 HHAVEFMCDYLRMITLGTENAHELESLMDEELETHHQERERIVSAMQALADGTPALGIVA 204
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A+LG+IK MG++ Q P +LG IG +L GT LG+ ++Y P+ +++T + + ++
Sbjct: 205 AVLGVIKTMGSIDQPPSVLGGLIGGALVGTFLGVFVAYGFFGPMAQSLRNTYEAESKYFL 264
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+K L+A+M G P V+IE+ RK L RP+ V Q
Sbjct: 265 SMKAGLLAHMAGYAPAVSIEFARKALMSEVRPTFIEVEQ 303
>gi|193222290|emb|CAL61470.2| Chemotaxis protein MotA (Motility protein A) [Herminiimonas
arsenicoxydans]
Length = 286
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 162/282 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + + GGF GG+ L QP E++++ GA G F + N K IK + +
Sbjct: 1 MLVIIGYIVVLASVFGGFALAGGHLSSLFQPVELLMIGGAAAGAFFVGNNSKAIKATFKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LL+ ++ ++K E ID P S IFT PTVL ++
Sbjct: 61 LPNVFKGSKYTKSLYMELMTLLFEILTKVRKEGLMSIEGDIDAPEESAIFTKYPTVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN +++IENLMD EID E P H I+ MG+ LPA GIV A
Sbjct: 121 HIIEFITDYLRLMVSGNMDAFQIENLMDNEIDTHHAEGEIPVHCIAKMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y +PL+S ++ + +++
Sbjct: 181 VMGVVHTMASVGLPPAELGILIANALVGTFLGILLAYGFVSPLSSTLEQKLHESSKVFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A +NG P +A+E+GRKVL +ERPS + + Q
Sbjct: 241 IKVTLLASLNGYAPALAVEFGRKVLFSTERPSFSELEDHIKQ 282
>gi|259907646|ref|YP_002648002.1| Flagellar motor protein MotA [Erwinia pyrifoliae Ep1/96]
gi|224963268|emb|CAX54752.1| Flagellar motor protein MotA [Erwinia pyrifoliae Ep1/96]
gi|283477489|emb|CAY73405.1| Chemotaxis protein motA (Motility protein A) [Erwinia pyrifoliae
DSM 12163]
Length = 298
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 169/286 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I + GGF GG+ L QP E++I+ GAG+G F++ N +K +K +G +
Sbjct: 1 MLVVIGYLVVIATVFGGFVLSGGSLSSLFQPVELLIIGGAGVGAFIVGNNMKSLKATGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ +F ++ + Y D++ +L++L+ + E I+DP NS IF++ P +L +
Sbjct: 61 LVRLFFGRSYSKVVYMDLMAMLFLLLSKSRVQGLMSLEKDIEDPANSDIFSAYPRLLSDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY R++I G+ +++IE+LMDEEI+ E P +++ +G++ PA GIV A
Sbjct: 121 TLINFVLDYFRLMISGSMNAHQIEDLMDEEIETCQEELEVPAQSLNTVGDAFPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G + LG I ++ GT LGI+++Y PL + ++ Q ++
Sbjct: 181 VMGVVNALGAADRPAAELGMLIAHAMVGTFLGILIAYGFVLPLATVLRQKSSDQVKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+K L++ +NG PQ+A+E+GRK L SERPS E + V + N
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTSERPSFEELETHVREVKSN 286
>gi|34497481|ref|NP_901696.1| flagellar motor protein MotA [Chromobacterium violaceum ATCC 12472]
gi|34103336|gb|AAQ59698.1| chemotaxis motA protein [Chromobacterium violaceum ATCC 12472]
Length = 284
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 165/278 (59%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
IG I + ++GGF A GG+ L+QP E+V++AGA +G F++AN +K + +L +
Sbjct: 5 IGYLIILGSVLGGFIAAGGHVAALMQPLEVVMIAGAAIGAFIVANGGAPLKATTKALPTV 64
Query: 65 FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
F G+ Y D+ LL+ ++ ++K E +++P S +F+ PT++ ++ +
Sbjct: 65 FKGSPYGKAFYMDLFSLLFEILTKVRKEGLMSIEADVENPEASPVFSKYPTIMHDHHVVE 124
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FICDY+R+++ GN ++EIENLMD EI+ +E P A+ + + LPA GIV A++G+
Sbjct: 125 FICDYLRLMVGGNLNAFEIENLMDVEIETHHHEGEVPVSAVKGLADGLPAFGIVAAVMGV 184
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+ M ++ P LG I +L GT LGI+L+Y PL + ++ + R+Y +K
Sbjct: 185 VHTMESVGAPPSELGMLIAHALVGTFLGILLAYGFVGPLGTILEHKLAEGTRVYQTIKVT 244
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
L+A +NG PQVA+E+GRK L +RPS + + V Q
Sbjct: 245 LLASLNGYAPQVAVEFGRKALSSMDRPSFKELEDHVKQ 282
>gi|304311520|ref|YP_003811118.1| Flagellar motor component [gamma proteobacterium HdN1]
gi|301797253|emb|CBL45473.1| Flagellar motor component [gamma proteobacterium HdN1]
Length = 284
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 161/274 (58%), Gaps = 1/274 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + + + GG+ G + QP+E++I+ GA G F++AN + VIK G
Sbjct: 1 MLKIIGIIVVLGSVAGGYVLSHGKLGAIWQPYELIIICGAAFGAFLIANGMPVIKGVGSG 60
Query: 61 LLEIFGYK-ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L +F K +D+Y ++L LLY + +K E I++P S IF V N
Sbjct: 61 LGAVFSGKLHWHKDSYMELLSLLYEVFNKARKSGLISIEEDIENPAGSEIFMRYHHVNSN 120
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+L FICDY+R+I GN + E+E+LMD+EI+ ++E +P HA++ + + LP GIV
Sbjct: 121 AKLVDFICDYLRIIASGNLSANELESLMDQEIETAMHEATEPAHAVNRVADGLPGFGIVA 180
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A+LGI+ MG+L P LG +G +L GT LGI+ +Y PL++ ++ + ++Y
Sbjct: 181 AVLGIVITMGSLGGPPDELGHHVGAALVGTFLGILFAYGFLAPLSNAMEHDAKESMKIYE 240
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
K ++A +NG PQ+A+E+GRKVLP ERP+
Sbjct: 241 CAKVCMLAMVNGIPPQLAVEFGRKVLPGGERPTF 274
>gi|292489121|ref|YP_003532008.1| chemotaxis protein MotA [Erwinia amylovora CFBP1430]
gi|292900240|ref|YP_003539609.1| motility protein A [Erwinia amylovora ATCC 49946]
gi|291200088|emb|CBJ47214.1| chemotaxis protein (motility protein A) [Erwinia amylovora ATCC
49946]
gi|291554555|emb|CBA22157.1| Chemotaxis protein motA (Motility protein A) [Erwinia amylovora
CFBP1430]
gi|312173279|emb|CBX81534.1| Chemotaxis protein motA (Motility protein A) [Erwinia amylovora
ATCC BAA-2158]
Length = 298
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 169/286 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I + GGF GG+ L QP E++I+ GAG+G F++ N +K +K +G +
Sbjct: 1 MLVVIGYLVVIATVFGGFVLSGGSLGSLFQPVELLIIGGAGIGAFIVGNNMKSLKATGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ +F ++ + Y D++ +L++L+ + E I+DP NS IF++ P +L +
Sbjct: 61 LVRLFFGRSYSKVVYMDLMAMLFLLLSKSRVQGLMSLEKDIEDPINSDIFSAYPRLLSDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY R++I G+ +++IE+LMDEEI+ E P +++ +G++ PA GIV A
Sbjct: 121 TLINFVLDYFRLMISGSMNAHQIEDLMDEEIETCQEELEVPSQSLNTVGDAFPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G + LG I ++ GT LGI+++Y PL + ++ Q ++
Sbjct: 181 VMGVVNALGAADRPAAELGMLIAHAMVGTFLGILIAYGFVLPLATVLRQKSSDQVKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+K L++ +NG PQ+A+E+GRK L SERPS E + V + N
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTSERPSFEELETHVREVKSN 286
>gi|23013134|ref|ZP_00053072.1| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 286
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 169/284 (59%), Gaps = 8/284 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ +T + +IGG+ A GG+ +L QPFE +I+ GA +G ++ NP VI G +
Sbjct: 1 MFAIIGIVVTFVSVIGGYAAPGGHLGVLFQPFEWLIIIGAAVGSLLLGNPKTVILGIGKN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F G+D Y ++L +LY + K E+H++ P S +F P ++
Sbjct: 61 IGLVFKGAHHGKDDYIELLSVLYAVFKLAKTKGDLALESHVEKPDESPLFGKFPKFSSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH----MGESLPAIG 176
TF CDY+R++ +G + ++E+E+++D E++ K YH I+H MG+++PA+G
Sbjct: 121 HTRTFFCDYLRLLTLGTSNAHELESIIDGELE----AHHKHYHEIAHAVNLMGDAMPALG 176
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG+I MG++++ P++LG IG +L GT G+++SY+ P+ ++ H
Sbjct: 177 IVAAVLGVIHTMGSITEPPEVLGHLIGAALVGTFSGVLISYAFIAPIARNMQLCFDSDHY 236
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ +K L+ +M G PQV+IE+ RK+LP RP+ + + + V
Sbjct: 237 YFMAIKAGLLGHMQGYAPQVSIEFARKILPDELRPTFQELEETV 280
>gi|310764848|gb|ADP09798.1| Flagellar motor protein MotA [Erwinia sp. Ejp617]
Length = 298
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 168/286 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I + GGF GG+ L QP E++I+ GAG+G F++ N +K +K +G +
Sbjct: 1 MLVVIGYLVVIATVFGGFVLSGGSLGSLFQPVELLIIGGAGIGAFIVGNNMKSLKATGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ +F + + Y D++ +L++L+ + E I+DP NS IF++ P +L +
Sbjct: 61 LVRLFFGRNYSKVVYMDLMAMLFLLLSKSRVQGLMSLEKDIEDPANSDIFSAYPRLLSDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY R++I G+ +++IE+LMDEEI+ E P +++ +G++ PA GIV A
Sbjct: 121 TLINFVLDYFRLMISGSMNAHQIEDLMDEEIETCQEELEVPAQSLNTVGDAFPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G + LG I ++ GT LGI+++Y PL + ++ Q ++
Sbjct: 181 VMGVVNALGAADRPAAELGMLIAHAMVGTFLGILIAYGFVLPLATVLRQKSSDQVKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+K L++ +NG PQ+A+E+GRK L SERPS E + V + N
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTSERPSFEELETHVREVKSN 286
>gi|114320661|ref|YP_742344.1| putative chemotaxis (motility protein A) transmembrane
[Alkalilimnicola ehrlichii MLHE-1]
gi|114227055|gb|ABI56854.1| putative chemotaxis (motility protein A) transmembrane
[Alkalilimnicola ehrlichii MLHE-1]
Length = 285
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 168/284 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ I ++ + G+ A GGN +L QPFE++I+ GA G F++ANP+KV+K +
Sbjct: 1 MKLILGVIIVLVSVAVGYTAHGGNLAVLWQPFEVLIIFGAAGGAFLIANPMKVVKQVAGN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ I + Y D+L LLY + ++ E +D+P+ S +F P+VL ++
Sbjct: 61 VPRIMKGPPYRKQHYMDLLALLYEVFQKTQRDGLLSIEADVDNPHESELFRKYPSVLNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+CDY+R+++ GN +E+ENLMD E++ E P HA++ + ++LP GI+ A
Sbjct: 121 EALHFLCDYLRLMVGGNMNPFELENLMDVELETHHQEAELPAHAVNRVADALPGFGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ AMG + + +G+ + +L GT +GI+ YSL PL ++ ++ + +
Sbjct: 181 LLGIVIAMGEIDGPVQQIGSLVAAALIGTFIGILAGYSLVGPLGIAMEHRAREKAKYLEV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K ++A +NG P VA+E+GRK + +ERPS E + V +N
Sbjct: 241 IKVTIMAVLNGYKPVVAVEFGRKAMYEAERPSFEELENHVKGHN 284
>gi|325981671|ref|YP_004294073.1| flagellar motor stator protein MotA [Nitrosomonas sp. AL212]
gi|325531190|gb|ADZ25911.1| flagellar motor stator protein MotA [Nitrosomonas sp. AL212]
Length = 286
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 163/278 (58%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
+G I I+ + GGF GG+ L QP E++++ G +G FV+ N K +K + +L +
Sbjct: 5 VGYLIIIISVFGGFALAGGHLASLWQPVEVLMIGGGAIGAFVVGNSNKALKATMKALPTV 64
Query: 65 FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
F + Y D++ LLY ++ ++K E +DDP NS IFT P +L ++ +T
Sbjct: 65 FKGSKYTKALYMDLMTLLYEVLGKIRKEGLMSIEGDVDDPSNSPIFTKYPNILADHHITE 124
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI DY+R+++ GN S EIE+LMD E++ E P H ++ +G+ LPA GIV A++G+
Sbjct: 125 FITDYLRLMVGGNLNSLEIESLMDSELETHHQEGEVPVHVVAKLGDGLPAFGIVAAVMGV 184
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+ M ++ P LG I +L GT LGI+L+Y +PL +++ + +++ +K
Sbjct: 185 VHTMESVHLPPAELGVLIAAALVGTFLGILLAYGFVSPLAGKLEHNLHESSKMFECIKIT 244
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
L+A +NG P +A+E+GRKVL +ERPS + + V Q
Sbjct: 245 LLANLNGYSPVLAVEFGRKVLFTTERPSFLELEEHVKQ 282
>gi|83311677|ref|YP_421941.1| flagellar motor component [Magnetospirillum magneticum AMB-1]
gi|82946518|dbj|BAE51382.1| Flagellar motor component [Magnetospirillum magneticum AMB-1]
Length = 286
Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 168/284 (59%), Gaps = 8/284 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ +T + +IGG+ A GG+ +L QPFE +I+ GA +G ++ NP +I +
Sbjct: 1 MFAIIGIVVTFVSVIGGYAAPGGHLSVLFQPFEWLIIIGAAVGSLLLGNPKTIIIGISKN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F G+D Y ++L +LY + K E+H++ P S +F P ++
Sbjct: 61 LGLVFKGAHHGKDDYIELLSVLYAVFKLAKTKGDLALESHVEKPDESPLFGKFPKFSSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH----MGESLPAIG 176
TF CDY+R++ +G + ++E+E+++D E++ K YH I+H MG+++PA+G
Sbjct: 121 HTRTFFCDYLRLLTLGTSNAHELESIIDGELE----AHHKHYHEIAHAVNLMGDAMPALG 176
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG+I MG++++ P++LG IG +L GT G+++SY+ P+ ++ H
Sbjct: 177 IVAAVLGVIHTMGSITEPPEVLGHLIGAALVGTFSGVLISYAFIAPIARNMQLCFDSDHY 236
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ +K L+ +M G PQV+IE+ RK+LP RP+ + + + V
Sbjct: 237 YFLAIKAGLLGHMQGYAPQVSIEFARKILPDELRPTFQELEETV 280
>gi|187478166|ref|YP_786190.1| flagellar motor protein MotA [Bordetella avium 197N]
gi|115422752|emb|CAJ49280.1| chemotaxis protein [Bordetella avium 197N]
Length = 291
Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 169/282 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I+ ++G F +GG+ L QPFE+ ++AGA LG F+ N K + +
Sbjct: 1 MLVVIGYAVVIVAVVGSFIGLGGHLGALYQPFELTLIAGAALGAFLAGNSRKSLVLVRQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +D Y +++ LLY+L+ ++ E+HI+DP +S IF P ++++
Sbjct: 61 IPRAFKSAPYSKDLYMELMALLYVLLNKARREGLMAIESHIEDPSSSPIFNEYPRIMKDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E P HA+ + + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETFRHEHEVPTHALQQVADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P +LG I ++ GT LG++L+Y PL S+++ + ++
Sbjct: 181 VLGVIKALAAVDQPPAVLGDLISKAMVGTFLGVLLAYGFVAPLASRVERRTTESVKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A MNG PQ+A+E+GRKVL + RPS + + V Q
Sbjct: 241 IKVTLLASMNGYPPQLAVEFGRKVLFSAVRPSFGELEEHVRQ 282
>gi|170748395|ref|YP_001754655.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
gi|170654917|gb|ACB23972.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
Length = 287
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 153/273 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I C+ G + AMGG+ +L QPFE VI+ GA +G FV+ N V+K
Sbjct: 1 MRLIVGTLIVFACVFGSYAAMGGHLLVLWQPFEFVIILGAAIGAFVIGNTGPVLKAVPAM 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + Q +Y ++L + Y L K+ E HI+DP ST+F + PT N+
Sbjct: 61 LGTLVKGPKYNQQSYVELLGMQYSLFRLAKQKGSMALEPHIEDPGESTLFNAFPTFAANH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CDYMRM+ +G +EI+ LMDEE++ E+ + A+ + + PA+GIV A
Sbjct: 121 HAVEFVCDYMRMVTLGANNVHEIDALMDEELETHHQEQERVVSAMQSLADGTPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IK MG + + P++LG IG +L GT G+ ++Y P+ +KS + + Y+
Sbjct: 181 VLGVIKTMGAIKEPPEVLGHLIGGALVGTFFGVFVAYGFFGPMAQSLKSLFEAESKYYLS 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A++ G P +A+E+ RK L RP+
Sbjct: 241 LKAGLLAHIAGQPPVMAVEFARKALMSDVRPTF 273
>gi|241763662|ref|ZP_04761712.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241367137|gb|EER61503.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 286
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 156/275 (56%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG FIT C+ G F A GGN +L++ PFE++ + GA LG F++ N KV+K +
Sbjct: 1 MFVIIGYFITFGCVFGVFVAHGGNIKVLLEALPFEMITIGGAALGSFIVTNQTKVLKSTM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F + Y +++ +LY ++ +K E ++ P S IF PTV
Sbjct: 61 AVLPQVFKGNKYTKARYMELMAMLYDILQKARKEGLMAIEKDVEAPAESEIFKKYPTVGG 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN S+EIE+LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DHHVIEFTTDYLRMMVSGNLNSHEIESLMDSEIETHHQEAHAPVAALTRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y PL ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPSVLGGMIASALVGTFLGILLAYGAVEPLAGLLEQKAEDAAKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A M G P AIE+GRKVL +ERPS
Sbjct: 241 HCIKSTLLASMQGYNPATAIEFGRKVLFSTERPSF 275
>gi|163793055|ref|ZP_02187031.1| motA, chemotaxis (motility protein A [alpha proteobacterium BAL199]
gi|159181701|gb|EDP66213.1| motA, chemotaxis (motility protein A [alpha proteobacterium BAL199]
Length = 286
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 165/286 (57%), Gaps = 12/286 (4%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + ++GG+ AMGG L QPFE+VI+ GAG+G F++ANP V+ +G
Sbjct: 1 MFVIIGWVVVTVSVLGGYMAMGGKLGPLWQPFELVIIGGAGVGAFIVANPKYVLSKAG-- 58
Query: 61 LLEIFGYKAL------GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIP 114
+G+KA +D Y ++L LLY + K E HI+ P ST+F + P
Sbjct: 59 ----YGFKAALKGPKYSKDDYLELLSLLYAIFKLAKTKGMLAIEAHIERPEESTLFQAFP 114
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
++ F+CDY+RM+ +G +E+ +L+DEE++ E + A MG+ PA
Sbjct: 115 KFSADHHAMDFLCDYLRMMTLGTNNPHELADLLDEELETHHAEDAQIQSAYQTMGDGFPA 174
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+GIV A+LGIIK M ++++ P++LG IG +L GT LGI+L+Y +PL++ + +
Sbjct: 175 LGIVAAVLGIIKTMSSITEPPEVLGKLIGGALVGTFLGILLAYGFVSPLSATMGAVFAAD 234
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ ++ L+A+++G P V++E+ RK L +RPS V + V
Sbjct: 235 AKYLGCIRAGLLAHVSGYAPAVSVEFARKALMSKDRPSFFEVEEAV 280
>gi|149377735|ref|ZP_01895469.1| Flagellar motor component [Marinobacter algicola DG893]
gi|149357961|gb|EDM46449.1| Flagellar motor component [Marinobacter algicola DG893]
Length = 283
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 161/274 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I I ++GG+ GGN +L QP EI+I+ GA +G F++ANPL IK+
Sbjct: 1 MLLIIGAVIVIASVLGGYVLHGGNLLVLWQPTEILIIGGAAVGSFIIANPLHTIKEVAKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + Y D+L L+Y + +K E ID+P +S IF+ P ++++
Sbjct: 61 VLNQLTGSPYNKSFYMDLLSLMYEIFDKSRKQGVMAIEEDIDNPESSQIFSRYPAIIKSK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I GN ++E+E +M+ EI+ +E +P HA++ + ++LP +GIV A
Sbjct: 121 YLLAFITDYLRIISSGNMATHELEGMMENEIESRQHELEEPAHAVNKIADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M LS+ P+ +G ++ +L GT LGI + Y P + ++ T + + Y
Sbjct: 181 VLGIVITMNFLSEGPERIGLSVAAALVGTFLGIWMGYGFVGPTSIAMEHTAKYEIKAYEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
K A++A ++G PQ+AIE+GRK LP +RP +
Sbjct: 241 AKSAIVATVSGQAPQMAIEFGRKALPSDKRPGFQ 274
>gi|311695401|gb|ADP98274.1| flagellar motor protein MotA [marine bacterium HP15]
Length = 283
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 164/277 (59%), Gaps = 6/277 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD---S 57
M I+G I + ++ G+ GGN +L QP E++I+ GA LG F++ANP+ +K+
Sbjct: 1 MLLIVGSIIVLASVLTGYVLHGGNLMVLWQPTEVLIIFGAALGSFIIANPVHTLKEVFGK 60
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
GV LL YK + Y D+L LLY + +K E ID+P S IF+ P V+
Sbjct: 61 GVQLLTGSPYK---KAFYMDLLSLLYEIFDKSRKQGVMAIEEDIDNPEASQIFSRYPAVM 117
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
++ EL FI DY+R+I GN ++E+E +M+ EID +E +P HA++ + ++LP +GI
Sbjct: 118 KSKELLAFITDYLRIISSGNMATHELEGMMENEIDSRQHELEEPAHAVNKIADALPGLGI 177
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
V A+LGI+ M L++ P+ +G ++ +L GT LGI + Y P + ++ + +
Sbjct: 178 VAAVLGIVITMNFLTEGPEKIGLSVAAALVGTFLGIFMGYGFVGPASIAMEHAAKYELKA 237
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
Y VK A++A ++G PQ+AIE+GRK LP +RP +
Sbjct: 238 YECVKSAIVATVSGQAPQMAIEFGRKALPTDKRPGFQ 274
>gi|329907015|ref|ZP_08274541.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
gi|327547115|gb|EGF31987.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
Length = 286
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 166/282 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + +L + GGF GG+ L QP E++++ GA LG F++ N K +K + +
Sbjct: 1 MLVIIGYIVVMLSVFGGFAMAGGHLAALWQPLELLMIGGAALGAFLVGNNGKAMKATLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D++ L++ ++ ++K E ++ P S IF+ P++L ++
Sbjct: 61 VPTLFKGSKFTKSLYMDLMSLMFEILTKVRKEGLMSIEGDVEKPEESPIFSKYPSILHDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN +++IENLMD EI+ +E P H I+ +G+ LPA GIV A
Sbjct: 121 HVVEFITDYLRLMVSGNMDAFQIENLMDNEIETHHHEGAVPAHCIAKLGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++S P LG I +L GT LGI+L+Y PL S ++ + ++Y
Sbjct: 181 VMGVVHTMESVSLPPAELGMLIAHALVGTFLGILLAYGFVGPLASLLEQKLDESTKIYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A +NG P +AIE+GRKVL +ERP+ + + + Q
Sbjct: 241 IKVTLLASLNGYAPALAIEFGRKVLFSTERPTFGELEEHIKQ 282
>gi|197285529|ref|YP_002151401.1| flagellar motor protein MotA [Proteus mirabilis HI4320]
gi|227356024|ref|ZP_03840415.1| motility protein A [Proteus mirabilis ATCC 29906]
gi|194683016|emb|CAR43483.1| chemotaxis protein (motility protein A) [Proteus mirabilis HI4320]
gi|227163801|gb|EEI48709.1| motility protein A [Proteus mirabilis ATCC 29906]
Length = 297
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I ++GGF +GG+ L QP E +I+ GAG+G FV+ N + I +
Sbjct: 1 MLVLLGYIVVICAVLGGFTLVGGHLGALYQPAEFLIIFGAGIGAFVVGNNGRAIVSTVKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ L++ L+ ++ E I++P S IF+ P ++++
Sbjct: 61 LPKLLRNTNYNKAMYMDLMALMFRLLSKARQNGMLALERDIENPQQSDIFSQYPRIMKDV 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +FI DYMR+++ GN YEIE LMDEEI E P +S MG+SLPA GIV A
Sbjct: 121 YMLSFITDYMRLMVTGNMNPYEIEALMDEEIATFEEESEVPAAGLSTMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G + +G IG ++ GT LGI+L+Y +PL S+I+ +Q ++
Sbjct: 181 VMGVVNALGAADRPAGEMGALIGHAMVGTFLGILLAYGFVSPLASRIRQRSSQQMKMMEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ MNG PQ+A+E+GRK L L++RPS + + V Q +A+
Sbjct: 241 IKTTLLSSMNGYAPQIAVEFGRKTLFLADRPSFIELEEHVRQVRTPMQAN 290
>gi|144899851|emb|CAM76715.1| chemotaxis (motility protein A) transmembrane [Magnetospirillum
gryphiswaldense MSR-1]
Length = 286
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 164/284 (57%), Gaps = 8/284 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ +TI +IGG+ A GG+ +L QPFE +I+ GA G + NP ++
Sbjct: 1 MFAIIGIVVTIASVIGGYAAAGGHLDVLWQPFEFIIILGAAFGSMFLGNPKDIVMGVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y ++L +LY + K E+H++ P S +F P ++
Sbjct: 61 IGMVFKGAHYKKDAYIEMLSMLYAVFKLAKTKGDLALESHVEKPDESPLFQKFPGFSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH----MGESLPAIG 176
TF CDY+R++ +G + ++E+E+++D E++ K YH ISH M +++PA+G
Sbjct: 121 HTRTFFCDYLRLLTLGTSNAHELESIIDGELE----AHHKHYHEISHAVNLMADAMPALG 176
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG+I MG++++ P++LG IG +L GT G+++SY+ P+ ++ + H
Sbjct: 177 IVAAVLGVIHTMGSITEPPEVLGHLIGAALVGTFTGVLISYAFFAPMARNMQMSFDSDHY 236
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ +K L+A+M G PQV+IE+ RK+LP RP+ + + + V
Sbjct: 237 YLLAIKAGLLAHMQGYAPQVSIEFARKILPDELRPTFQELEETV 280
>gi|300694373|ref|YP_003750346.1| mota: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum PSI07]
gi|299076410|emb|CBJ35726.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum PSI07]
Length = 286
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + S
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGVGAFVVGNDKKAINATVKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I+ P+ S +F++ P + ++
Sbjct: 61 LPGLFKGSKYTKSLYMEVMALLYVMLSKIRREGMMSIEADIESPHESALFSNYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A MNG P +A+E+GRKVL +ERPS
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSF 273
>gi|187926230|ref|YP_001892575.1| flagellar motor protein MotA [Ralstonia pickettii 12J]
gi|241665718|ref|YP_002984077.1| flagellar motor protein MotA [Ralstonia pickettii 12D]
gi|187727984|gb|ACD29148.1| flagellar motor protein MotA [Ralstonia pickettii 12J]
gi|240867745|gb|ACS65405.1| flagellar motor protein MotA [Ralstonia pickettii 12D]
Length = 286
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + +
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGIGAFVVGNDKKAINATVKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I++P+ ST+F + P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVVLSKIRREGMMSIEADIENPHESTLFANYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A MNG P +A+E+GRKVL +ERPS
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSF 273
>gi|114330217|ref|YP_746439.1| flagellar motor protein MotA [Nitrosomonas eutropha C91]
gi|114307231|gb|ABI58474.1| putative chemotaxis (motility protein A) transmembrane
[Nitrosomonas eutropha C91]
Length = 286
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 161/282 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I+ + GGF GG+ L QP E++++AGA LG F + N K IK + +
Sbjct: 1 MLVTIGYLIVIVSVFGGFALAGGHLGSLFQPVELLMIAGAALGAFFVGNSGKAIKATFKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LLY ++ ++K E +DDP S +FT P +L ++
Sbjct: 61 LPGVFQGARYTKVVYMELMTLLYEVLGKIRKEGLMSIEADVDDPAKSPLFTKYPKILSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI DY+R+++ GN EIENLMD EI+ E P H I MG++LPA GIV A
Sbjct: 121 HAIEFITDYLRLMVGGNLNPLEIENLMDGEIETHHQEGEVPVHVIGKMGDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y +PL S+++ + +L
Sbjct: 181 VMGVVHTMASVGIPPAELGKLIAAALVGTFLGILLAYGFVSPLASRLEQRLHESSKLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A +NG P +A+E+GRKVL +ERPS + + V Q
Sbjct: 241 IKVTLLANLNGYAPALAVEFGRKVLFSTERPSFIELEKHVKQ 282
>gi|91776292|ref|YP_546048.1| flagellar motor protein MotA [Methylobacillus flagellatus KT]
gi|91710279|gb|ABE50207.1| putative chemotaxis transmembrane protein MotA [Methylobacillus
flagellatus KT]
Length = 286
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 159/282 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I G + + + GGF GG+ L QP E++++ GA +G F++ N K IK + +
Sbjct: 1 MLVIAGYLVVLGSVFGGFAMAGGHLAALFQPIELLMIGGAAIGAFLVGNDAKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LL+ ++ +++ E+ ID+P S IF+ P +L ++
Sbjct: 61 LPSVFKGSKYTKARYMDLLALLFEILTKIRRDGMMAIESDIDNPEASQIFSKYPDILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R++ GN +++IENLMD EI+ +E + P H I+ +GE +PA GIV A
Sbjct: 121 HLMDFICDYLRLMTSGNMDAFQIENLMDNEIETHHHESMVPSHCIARLGEGMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL S ++ + ++
Sbjct: 181 VMGVVHTMESVGLPPGELGMLIAHALVGTFLGILLAYGFVGPLASLLERKADESSKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
K L+A N P +A+E+GRKVL +ERP + V Q
Sbjct: 241 AKVTLLASHNSYAPAIAVEFGRKVLYSTERPEFAELEAHVKQ 282
>gi|322832490|ref|YP_004212517.1| flagellar motor protein MotA [Rahnella sp. Y9602]
gi|321167691|gb|ADW73390.1| flagellar motor protein MotA [Rahnella sp. Y9602]
Length = 296
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 165/282 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + + GGF +GG L QP E++I+ GAG+G F + N K IK + +
Sbjct: 1 MLVIIGYIVVLGSVFGGFMLVGGELGALYQPAELLIIGGAGIGAFFVGNNGKAIKSTMRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++F + Y D++ LLY ++ ++ EN ID+P S IF + P +L +
Sbjct: 61 LPQLFRASKYNKALYMDLMALLYRVLAKSRQQGMLSLENDIDNPAESDIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L ++ DY+R+++ GN ++EIE LMDEEI+ +E P ++++ +G+SLPA GIV A
Sbjct: 121 QLVEYLTDYLRLMVSGNMNAFEIEALMDEEIETYEHESEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GI+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGIVHTLAAADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAENAKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L++ +NG PQ+A+E+GRK L SERPS + + V Q
Sbjct: 241 IKVTLLSSINGYAPQIAVEFGRKTLYTSERPSFIELEEHVRQ 282
>gi|238919360|ref|YP_002932875.1| flagellar motor protein MotA [Edwardsiella ictaluri 93-146]
gi|238868929|gb|ACR68640.1| chemotaxis protein MotA [Edwardsiella ictaluri 93-146]
Length = 301
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 170/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + ++ + GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYAVVLIAVFGGYTLVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y DV+ L+Y L+ ++ E I+DP S IF++ P ++ +N
Sbjct: 61 LPRLARGSKYNKALYMDVMGLMYQLLAKSRQQGMLTLERDIEDPKESEIFSNYPRLIADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR+II GN ++EIE+LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLIEFITDYMRLIISGNMNAFEIESLMDEEIETFEQEAEVPAGSLAAVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASLMRQKSAETAKMMHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V Q + K +
Sbjct: 241 IKTTLLSSLNGYAPQIAVEFGRKTLYSTERPSFLELEEHVRQVKYPAKQA 290
>gi|17549630|ref|NP_522970.1| flagellar motor protein MotA [Ralstonia solanacearum GMI1000]
gi|83747600|ref|ZP_00944637.1| Probable chemotaxis motA protein [Ralstonia solanacearum UW551]
gi|207725017|ref|YP_002255414.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
MolK2]
gi|207738643|ref|YP_002257036.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
IPO1609]
gi|300697988|ref|YP_003748649.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum
CFBP2957]
gi|17431884|emb|CAD18562.1| probable chemotaxis (motility protein a) transmembrane [Ralstonia
solanacearum GMI1000]
gi|83725780|gb|EAP72921.1| Probable chemotaxis motA protein [Ralstonia solanacearum UW551]
gi|206590246|emb|CAQ37207.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
MolK2]
gi|206592011|emb|CAQ58917.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
IPO1609]
gi|299074712|emb|CBJ54270.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum
CFBP2957]
Length = 286
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + S
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGVGAFVVGNDKKAINATVKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I+ P+ S +F++ P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVMLSKIRREGMMSIEADIESPHESALFSNYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A MNG P +A+E+GRKVL +ERPS
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSF 273
>gi|265996660|ref|ZP_06109217.1| flagellar motor protein MotA [Brucella ceti M490/95/1]
gi|262550957|gb|EEZ07118.1| flagellar motor protein MotA [Brucella ceti M490/95/1]
Length = 172
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 121/172 (70%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
MGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G + +E F Q Y DVL
Sbjct: 1 MGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRACMEAFTDAVPKQRDYLDVLG 60
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
+LY LM L+ SRNE E HID+P S IF + P+VL+ +LT FICDY R+IIVGN RS
Sbjct: 61 VLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKEDLTNFICDYCRLIIVGNVRS 120
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
YEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A+LG+IKAMG L
Sbjct: 121 YEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAAVLGVIKAMGALD 172
>gi|288962675|ref|YP_003452969.1| chemotaxis protein [Azospirillum sp. B510]
gi|288914941|dbj|BAI76425.1| chemotaxis protein [Azospirillum sp. B510]
Length = 295
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 172/276 (62%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL ++GGFYAMGG +L QP EIVI+ GAG+GGF +AN V++D+ +
Sbjct: 1 MRLMFGLIAVFASVLGGFYAMGGRMAVLWQPVEIVIIIGAGIGGFAIANSPAVLRDTLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ I +A ++ Y D++ L+Y L+ K ++ E ID P S +FT P VL +
Sbjct: 61 VAAIARGRATPKNDYLDMIALVYGLLRVAKSKGMSQIEADIDKPAESPLFTQYPNVLRYD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+CDY+R+I +G +++E+LM EE++ + E + A+ ++ ++LPA+GIV A
Sbjct: 121 RCISFLCDYLRLIALGQDNPHDLESLMAEELETLGRELNQVPKALQNLADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I AMG +S++P++LG IG +LTGT LG++LSY + P+ S + R + +Y
Sbjct: 181 VLGVINAMGAISEAPEVLGRMIGGALTGTFLGVLLSYGMVGPIASAARQRRESELNMYFC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+K AL AY+ G+ PQV EY RKVL +PS+ V
Sbjct: 241 IKAALCAYLRGSPPQVCAEYARKVLYTDIQPSLAEV 276
>gi|152980324|ref|YP_001353789.1| flagellar motor protein MotA [Janthinobacterium sp. Marseille]
gi|151280401|gb|ABR88811.1| MotA chemotaxis protein [Janthinobacterium sp. Marseille]
Length = 286
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 162/282 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + +L + GGF GG+ L QP E++++ GA +G F + N K IK + +
Sbjct: 1 MLVIIGYLVVVLSVFGGFALAGGHLAALFQPLELLMIGGAAVGAFFVGNNGKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LL+ ++ ++K E I+ P S IF PTVL ++
Sbjct: 61 LPSVFKGSRYTKSLYMELMTLLFEILTKVRKEGLMSIEGDIEAPEESAIFAKYPTVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ DY+R+++ GN +++IENLMD EI+ E P H ++ +G+ LPA GIV A
Sbjct: 121 HTIEFMTDYLRLMVSGNMDAFQIENLMDNEIETHHAEGEVPVHCVAKVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+LSY PL+S ++ + +++
Sbjct: 181 VMGVVHTMESVGLPPAELGMLIAHALVGTFLGILLSYGFVTPLSSLLEQKLHESSKIFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK L+A +NG P +A+E+GRKVL +ERPS + + + Q
Sbjct: 241 VKVTLLASLNGYAPALAVEFGRKVLFSTERPSFSEMEEHIRQ 282
>gi|299069797|emb|CBJ41077.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum CMR15]
Length = 286
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 160/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + S
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGVGSFVVGNDKKAINATVKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I+ P+ S +F + P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVMLSKIRREGMMSIEADIESPHESALFANYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A MNG P +A+E+GRKVL +ERPS
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSF 273
>gi|126417354|gb|ABO13879.1| MotA [Ralstonia solanacearum]
Length = 286
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + +
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGVGAFVVGNDKKAINATVKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I+ P+ S +F++ P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVMLSKIRREGMMSIEADIESPHESALFSNYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A MNG P +A+E+GRKVL +ERPS
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSF 273
>gi|30248077|ref|NP_840147.1| flagellar motor protein MotA [Nitrosomonas europaea ATCC 19718]
gi|30179962|emb|CAD83957.1| probable chemotaxis (motility protein A) transmembrane
[Nitrosomonas europaea ATCC 19718]
Length = 286
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 161/282 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I+ + GGF GG+ L QP E++++AGA +G F + N K IK + +
Sbjct: 1 MLVAIGYVVVIVSVFGGFAMAGGHLGSLFQPVELIMIAGAAVGAFFVGNSGKAIKATFKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L IF + Y +++ LLY ++ ++K E +DDP S +F P +L ++
Sbjct: 61 LPYIFRDANYTKSVYMELMTLLYEILGKIRKEGLMSIEADVDDPGKSPLFGKYPKILSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T FI DY+R+++ GN EIENLMD EI+ E P H IS MG++LPA GIV A
Sbjct: 121 HATEFITDYLRLMVGGNLNPLEIENLMDGEIETHHQEGEVPVHVISKMGDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL ++++ + +L
Sbjct: 181 VMGVVHTMESVGIPPAELGKLIAAALVGTFLGILLAYGFIGPLANRLEQRLHESGKLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK L+A +NG P +A+E+GRKVL +ERPS + + + Q
Sbjct: 241 VKVTLLANLNGYAPALAVEFGRKVLFSTERPSFAELEKHIKQ 282
>gi|156933519|ref|YP_001437435.1| flagellar motor protein MotA [Cronobacter sakazakii ATCC BAA-894]
gi|156531773|gb|ABU76599.1| hypothetical protein ESA_01339 [Cronobacter sakazakii ATCC BAA-894]
Length = 336
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 162/277 (58%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG + + + GG+ GG L QP E++I+ GAG+G F++ N K IK + +L
Sbjct: 45 LIGYLVILGTVFGGYMITGGELGALYQPAELIIIGGAGVGAFIVGNNGKAIKGTLKALPL 104
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + Y D++ LLY LM ++ E I++P S IFTS P +L +N +
Sbjct: 105 LFRRSKYTKSMYMDLMALLYRLMTKSRQQGMFSLERDIENPKESEIFTSYPRILADNTML 164
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI DY+R+II GN ++EIE LMDEEI+ E P ++++ MG+SLPA GIV A++G
Sbjct: 165 EFITDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLALMGDSLPAFGIVAAVMG 224
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++ VK
Sbjct: 225 VVHALASADRPAAELGALIAHAMVGTFLGILLAYGFVSPLATVLRQKSAETTKMMQCVKV 284
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
L++ +NG P +A+E+GRK L SERPS + + V
Sbjct: 285 TLLSSLNGYAPPIAVEFGRKTLYSSERPSFTELDEHV 321
>gi|324013536|gb|EGB82755.1| flagellar motor protein MotA [Escherichia coli MS 60-1]
Length = 295
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 163/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GGF+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGFFLTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRTKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|218548502|ref|YP_002382293.1| flagellar motor protein MotA [Escherichia fergusonii ATCC 35469]
gi|218356043|emb|CAQ88659.1| proton conductor component of flagella motor [Escherichia
fergusonii ATCC 35469]
gi|324113676|gb|EGC07651.1| chemotaxis protein motA [Escherichia fergusonii B253]
gi|325496922|gb|EGC94781.1| flagellar motor protein MotA [Escherichia fergusonii ECD227]
Length = 295
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 170/291 (58%), Gaps = 1/291 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLIILGYLVVIGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGAFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYSKAMYMDLLALLYRLMAKSRQQGMFSLERDIENPQESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ S+EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNSFEIEALMDEEIETHESEAEVPANSLAIVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLAGVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS-IEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS +E+ N N++A+
Sbjct: 241 VKVTLLSSLNGYAPPIAVEFGRKTLYSSERPSFVELEEHVRAVKNPNQQAT 291
>gi|253998519|ref|YP_003050582.1| flagellar motor protein MotA [Methylovorus sp. SIP3-4]
gi|253985198|gb|ACT50055.1| flagellar motor protein MotA [Methylovorus sp. SIP3-4]
Length = 286
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 164/282 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ GG+ L QP E++++ G +G F++ N K +K + +
Sbjct: 1 MLVIVGYVVVLAAVFGGYALAGGHLGALWQPLEVLMIFGGAIGAFIVGNNGKALKATLGA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LL+ ++ ++K EN +++P +S +F+ P + ++
Sbjct: 61 LPTLFKGSKFTKALYMDLLALLFEILSKIRKDGMMSIENDVENPESSPLFSKYPALQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R++I GN ++++ENLMD EI+ E P H I+ +G+ LPA GIV A
Sbjct: 121 HLMEFITDYLRLMISGNMDAFQVENLMDNEIETHHQEGHVPVHCIARLGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M N++ P LG I +L GT LGI+L+Y PL+S ++ + ++Y
Sbjct: 181 VMGVVHTMENVALPPAELGILIAHALVGTFLGILLAYGFIGPLSSLLEQKLDESTKMYQT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK L+A +NG P +A+E+GRKVL +ERP + + V Q
Sbjct: 241 VKATLLASLNGYAPAIAVEFGRKVLYSTERPGFTELEEHVKQ 282
>gi|121997036|ref|YP_001001823.1| putative chemotaxis (motility protein A) transmembrane
[Halorhodospira halophila SL1]
gi|121588441|gb|ABM61021.1| putative chemotaxis (motility protein A) transmembrane
[Halorhodospira halophila SL1]
Length = 290
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I +I G+ A GG IL QP+E +I+ GA +GGF++ANP+KVIK +
Sbjct: 1 MLVIIGAAIAFFSVIVGYAAHGGPLAILWQPYEFLIIFGAAIGGFMIANPMKVIKRVLST 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +I G G++ Y D+L LLY + ++ E+ +D+P+ S +F S P +L ++
Sbjct: 61 VPKIPGGSPYGREHYMDLLALLYEIFQRAQRDGLLSIEDDVDNPHESELFKSYPRILNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CDY+R+++ GN +E+ENLMD EI+ E +P A++ + +++P GI+ A
Sbjct: 121 VALEFLCDYLRLMVGGNMNPFEMENLMDVEIETHHKEAAQPAAAVNKVADAMPGFGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ A+G+L + +G + +L GT GI Y+ PL + + +Q +
Sbjct: 181 LLGVVIALGSLDEDVMTIGGLVASALVGTFTGIFAGYAFVGPLGQAMDNRAAEQTKFLET 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A +NG P VA+E+GRK + +ERP+
Sbjct: 241 IKLTLLAVLNGYKPVVAVEFGRKAMYEAERPTF 273
>gi|313672699|ref|YP_004050810.1| lateral flagellar motor protein mota [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939455|gb|ADR18647.1| lateral flagellar motor protein MotA [Calditerrivibrio
nitroreducens DSM 19672]
Length = 284
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 163/274 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG + ++GG+ GGN ++LIQP E +I+AGA G ++ +P ++K
Sbjct: 1 MTAIIGYIVVFGAVLGGYLMSGGNLHMLIQPSEFIIIAGAATGALIVGSPTALLKLIAGG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ K + Y D+L LLY L +K E+ +++ S IF + P+VL+N+
Sbjct: 61 MKSFLSGKTPSKKEYEDLLMLLYELFIKARKNGLLSLESDVENAKESPIFNNYPSVLKNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +++I+ G + +E+ENLMD +I+ E+ P HAI M + LPA GIV A
Sbjct: 121 HLLHFISDNLKVILTGVMQPHELENLMDVDIETAHKEEHLPAHAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG +S+ P++LG IG +L GT LG++L+Y + P+ S +++ + ++ +
Sbjct: 181 VMGVVITMGLISEPPEVLGHHIGAALVGTFLGVLLAYGIVGPIASALENIVIFNSFVFRV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
VK+AL+ ++N P+ AIE R+ +P S RPS E
Sbjct: 241 VKEALVFFVNTPDPKAAIELARRAIPPSARPSFE 274
>gi|224824156|ref|ZP_03697264.1| flagellar motor protein MotA [Lutiella nitroferrum 2002]
gi|224603575|gb|EEG09750.1| flagellar motor protein MotA [Lutiella nitroferrum 2002]
Length = 286
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 165/278 (59%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
IG + +L ++GGF GG+ L+QP E++++ GA +G FV+AN +K + +L +
Sbjct: 5 IGYVVILLSVLGGFVMAGGHLAALLQPLEVLMIGGAAIGAFVVANGGTPLKATLAALPTL 64
Query: 65 FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
F + + Y ++ LL+ ++ ++K E +D+P +S +F+ P VL ++ +
Sbjct: 65 FKGSSYTKAFYMELFALLFEILAKVRKEGLMSVEADVDNPESSPVFSKYPAVLHDHHVVE 124
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FICDY+R+++ GN ++EIENLMD EI+ +E P +A+ + + +PA GIV A++G+
Sbjct: 125 FICDYLRLMVGGNLNAFEIENLMDVEIETHHHEGEVPVNAMKGLADGMPAFGIVAAVMGV 184
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+ M ++ P LG I +L GT LGI+L+Y PL + ++ R++ +K
Sbjct: 185 VHTMESVGIPPSELGMLIAHALVGTFLGILLAYGFVGPLATILEHKLADGTRVFQTIKVT 244
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
L+A +NG PQV++E+GRKVL +RPS + + V Q
Sbjct: 245 LLASLNGYAPQVSVEFGRKVLASHDRPSFKELEDHVKQ 282
>gi|304396267|ref|ZP_07378149.1| flagellar motor protein MotA [Pantoea sp. aB]
gi|308187235|ref|YP_003931366.1| Chemotaxis protein motA (Motility protein A) [Pantoea vagans C9-1]
gi|304356636|gb|EFM21001.1| flagellar motor protein MotA [Pantoea sp. aB]
gi|308057745|gb|ADO09917.1| Chemotaxis protein motA (Motility protein A) [Pantoea vagans C9-1]
Length = 295
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I + ++GG+ +GG+ L QP E++++ GAG G F++ N K IK + +
Sbjct: 1 MLIIIGYLIVLGSVLGGYALVGGHLGALYQPAELLMIGGAGAGAFLVGNNGKSIKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++F + Y D++ LLY LM ++ E I+DP S IF + P +L +
Sbjct: 61 LPKLFRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIEDPSQSEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R+++ GN ++EIE LMDEEI+ +E P +I+ +G+ LPA GIV A
Sbjct: 121 QLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYEHECDVPAQSIAAVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG + ++ GT LGI+L+Y +PL+S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALVAHAMVGTFLGILLAYGFVSPLSSVLRQKCAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + K +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSAERPSFSELEEHVRNAKNPAKQT 290
>gi|309778973|ref|ZP_07673743.1| chemotaxis protein MotA [Ralstonia sp. 5_7_47FAA]
gi|308922320|gb|EFP67947.1| chemotaxis protein MotA [Ralstonia sp. 5_7_47FAA]
Length = 286
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + +
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGIGAFVVGNDKKAINATVKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I++P+ S +F + P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVVLSKIRREGMMSIEADIENPHESALFANYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A MNG P +A+E+GRKVL +ERPS
Sbjct: 241 MKVTLLASMNGYAPAIAVEFGRKVLFSTERPSF 273
>gi|296534173|ref|ZP_06896664.1| chemotaxis protein MotA [Roseomonas cervicalis ATCC 49957]
gi|296265500|gb|EFH11634.1| chemotaxis protein MotA [Roseomonas cervicalis ATCC 49957]
Length = 289
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 165/278 (59%), Gaps = 2/278 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M + G + ++C+ GG+ GG+ P + PFE++I+ GA +G F+MAN + +K +
Sbjct: 1 MIVLAGFGVVLVCVFGGYLIAGGSLGPILHALPFEMLIIGGAAVGSFLMANSMAAVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L ++ + Y D+ +LY L+ + E HI+ P S IFT P VL
Sbjct: 61 GALKKVLKGARYTRQDYLDLCAVLYRLLRVAQMKGAVGLEPHIERPNESEIFTLFPKVLA 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + ICDY+RMI + +++E++M E+ I E+L P HA+ M ++LPA+GIV
Sbjct: 121 DHHALSLICDYLRMIGMNADDPHQVEDVMLRELKKIREEELHPAHALQTMADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ + P +LG IG +L GT LG++L+Y L PL +++++ ++ +
Sbjct: 181 AAVLGVIKTMGSIDKPPAVLGAMIGGALVGTFLGVLLAYGLVGPLATRLRAIVDEEAKYL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+V+ LIA++ G P VA+E GRK +P P+ +++
Sbjct: 241 EVVRAVLIAHLQGNAPSVAVEIGRKAVPSDLMPTFQVL 278
>gi|26248157|ref|NP_754197.1| flagellar motor protein MotA [Escherichia coli CFT073]
gi|300994030|ref|ZP_07180649.1| flagellar motor protein MotA [Escherichia coli MS 45-1]
gi|26108561|gb|AAN80764.1|AE016762_17 Chemotaxis motA protein [Escherichia coli CFT073]
gi|300406398|gb|EFJ89936.1| flagellar motor protein MotA [Escherichia coli MS 45-1]
gi|315290319|gb|EFU49695.1| flagellar motor protein MotA [Escherichia coli MS 153-1]
Length = 295
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GGN L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGNLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|146305659|ref|YP_001186124.1| flagellar motor protein MotA [Pseudomonas mendocina ymp]
gi|145573860|gb|ABP83392.1| Flagellar motor component-like protein [Pseudomonas mendocina ymp]
Length = 283
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 162/283 (57%), Gaps = 10/283 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M IIG+ + C+ GGF GG L+ PFE++I+ GA LGGF+ ANP + V K
Sbjct: 1 MVKIIGIVVVFACVFGGFVLSGGQLMALVHPFEVLIIGGAALGGFLQANPGSMFMTVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L +FG + Y +VLKLLY ++ ++ E ++DP S IF+ P V
Sbjct: 61 S----LSMFGTR-FTHTYYLEVLKLLYEILNKSRREGMMAIEADVEDPNASPIFSKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T FICDY+R++ GN +E+E L D E+ + E P HA++ + + LPA+G
Sbjct: 116 LKDARMTAFICDYLRIMSSGNMAPHELEGLFDMELASLKEEVEHPAHAVAKIADGLPAMG 175
Query: 177 IVGAILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M L+++ +G + +L GT LGI+ SY PL++ ++ ++
Sbjct: 176 IVAAVLGIVITMSILAEADNAQIGEKVATALVGTFLGILASYGFFGPLSNALEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
LY +K L+A +G P +A+E+GRKVL + RPS + Q
Sbjct: 236 NLYEAIKATLVASASGMPPSLAVEFGRKVLFPAHRPSFSELEQ 278
>gi|291617785|ref|YP_003520527.1| MotA [Pantoea ananatis LMG 20103]
gi|291152815|gb|ADD77399.1| MotA [Pantoea ananatis LMG 20103]
Length = 295
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + ++GG+ +GG+ L QP E++++AGAG+G F++ N K IK + +
Sbjct: 1 MLIILGYIVVLGSVLGGYALVGGHLGALYQPAELLMIAGAGVGAFLVGNNGKSIKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ LLY LM ++ E I+DP S IF + P +L +
Sbjct: 61 LPLLFRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIEDPAQSEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R+++ GN ++EIE LMDEEI+ +E P +I+ +G+ LPA GIV A
Sbjct: 121 QLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPAQSIAAVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG + ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALVAHAMVGTFLGILLAYGFISPLASVLRQKCAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG PQ+A+E+GRK L +ERPS + + V + K +
Sbjct: 241 VKVTLLSSLNGYAPQIAVEFGRKTLYSAERPSFSELEEHVRNAKNPAKQT 290
>gi|270262420|ref|ZP_06190691.1| chemotaxis protein MotA [Serratia odorifera 4Rx13]
gi|270043104|gb|EFA16197.1| chemotaxis protein MotA [Serratia odorifera 4Rx13]
Length = 298
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 161/270 (59%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + ++ +
Sbjct: 6 ILGYLVVLGAVFGGYMMVGGHLGALYQPSEFLIIGGAGIGAFIVGNNGKAIKSTLRAIPK 65
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ +D Y D++ LLY L+ ++ E ID+P S IF++ P +L +N L
Sbjct: 66 LMRRSKYSKDLYMDLMALLYRLLAKSRQQGMLSLEFDIDNPQESEIFSNYPRILADNTLV 125
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI DY+R+++ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A++G
Sbjct: 126 EFITDYLRLMVSGNMNAFEIEALMDEEIETFEQESEVPAGSLAMVGDSLPAFGIVAAVMG 185
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++ +K
Sbjct: 186 VVHALASADRPAAELGALIANAMVGTFLGILLAYGFISPLATLLRQKSAENVKMMQCIKV 245
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 246 TLLSSLNGYAPQIAVEFGRKTLYTTERPSF 275
>gi|294635725|ref|ZP_06714191.1| chemotaxis MotA protein [Edwardsiella tarda ATCC 23685]
gi|291090937|gb|EFE23498.1| chemotaxis MotA protein [Edwardsiella tarda ATCC 23685]
Length = 296
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + ++ + GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYAVVLIAVFGGYALVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y DV+ L+Y L+ ++ E I+DP +S IF++ P +L +
Sbjct: 61 LPKLARGSKYNKALYMDVMGLMYQLLAKSRQQGMLSLERDIEDPSSSDIFSNYPRLLADQ 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DYMR+II GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLIEFVTDYMRLIISGNMNAFEIEALMDEEIETFEQEAEVPAGSLAAVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASLMRQKSAETSKMMHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V Q K +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFIELEEHVRQVKAPAKQA 290
>gi|260598379|ref|YP_003210950.1| flagellar motor protein MotA [Cronobacter turicensis z3032]
gi|260217556|emb|CBA31776.1| Chemotaxis protein motA [Cronobacter turicensis z3032]
Length = 285
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 157/268 (58%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+ GG+ GG L QP E++I+ GAG+G F++ N K IK + +L +F +
Sbjct: 3 TVFGGYMMTGGELGALYQPAELIIIGGAGVGAFIVGNNGKAIKGTVKALPLLFRRSKYTK 62
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
Y D++ LLY LM ++ E I++P S IFTS P +L +N + FI DY+R+
Sbjct: 63 SMYMDLMALLYRLMTKSRQQGMFSLERDIENPKESEIFTSYPRILADNTMLEFITDYLRL 122
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
II GN ++EIE LMDEEI+ E P ++++ MG+SLPA GIV A++G++ A+ +
Sbjct: 123 IISGNMNTFEIEALMDEEIETHESEAEVPANSLALMGDSLPAFGIVAAVMGVVHALASAD 182
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ LG I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +NG
Sbjct: 183 RPAAELGALIAHAMVGTFLGILLAYGFVSPLATVLRQKSAETTKMMQCVKVTLLSSLNGY 242
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEV 280
P +A+E+GRK L SERPS + + V
Sbjct: 243 APPIAVEFGRKTLYSSERPSFTELDEHV 270
>gi|74317261|ref|YP_315001.1| flagellar motor protein MotA [Thiobacillus denitrificans ATCC
25259]
gi|74056756|gb|AAZ97196.1| probable chemotaxis transmembrane protein MotA [Thiobacillus
denitrificans ATCC 25259]
Length = 286
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 158/273 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I +L + GGF GG+ L QP E++++ G +G F++ N KVIK + +
Sbjct: 1 MLVIVGYVIVVLSVFGGFVLAGGHLAALFQPLELLMIGGGAIGAFLVGNNNKVIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D L LLY L+ ++K E +D P +S +F+ P ++ ++
Sbjct: 61 LPTVLKGSKYTRALYMDTLALLYELLTKIRKEGLMSVEADVDSPESSPLFSKYPAIMADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ G+ ++EIENLMD EI+ +E P H I+ +G+ LPA GIV A
Sbjct: 121 HVVEFLTDYLRLMVSGSMNAFEIENLMDNEIETHHHEGEVPAHVIAKIGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL +++ + ++
Sbjct: 181 VMGVVHTMESVGLPPAELGILIAHALVGTFLGILLAYGFVGPLAGRLEQRVHESTKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L+A +NG P +A+E+GRKVL +ERPS
Sbjct: 241 VKVTLLASINGYAPAIAVEFGRKVLFSTERPSF 273
>gi|194439071|ref|ZP_03071154.1| chemotaxis protein MotA [Escherichia coli 101-1]
gi|300822335|ref|ZP_07102476.1| flagellar motor protein MotA [Escherichia coli MS 119-7]
gi|301029342|ref|ZP_07192439.1| flagellar motor protein MotA [Escherichia coli MS 196-1]
gi|194422030|gb|EDX38034.1| chemotaxis protein MotA [Escherichia coli 101-1]
gi|299877768|gb|EFI85979.1| flagellar motor protein MotA [Escherichia coli MS 196-1]
gi|300525218|gb|EFK46287.1| flagellar motor protein MotA [Escherichia coli MS 119-7]
gi|323972600|gb|EGB67803.1| chemotaxis protein MotA [Escherichia coli TA007]
gi|332343617|gb|AEE56951.1| chemotaxis protein MotA [Escherichia coli UMNK88]
Length = 295
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHASEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|300904778|ref|ZP_07122606.1| flagellar motor protein MotA [Escherichia coli MS 84-1]
gi|301305234|ref|ZP_07211331.1| flagellar motor protein MotA [Escherichia coli MS 124-1]
gi|300403292|gb|EFJ86830.1| flagellar motor protein MotA [Escherichia coli MS 84-1]
gi|300839440|gb|EFK67200.1| flagellar motor protein MotA [Escherichia coli MS 124-1]
gi|315257276|gb|EFU37244.1| flagellar motor protein MotA [Escherichia coli MS 85-1]
Length = 295
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GGN L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGNLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|290474939|ref|YP_003467823.1| proton conductor component of motor, torque generator [Xenorhabdus
bovienii SS-2004]
gi|289174256|emb|CBJ81045.1| proton conductor component of motor, torque generator [Xenorhabdus
bovienii SS-2004]
Length = 293
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 165/280 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + +IGG+ +GG+ L QP E +I+AGAG+G F++ N K IK +
Sbjct: 1 MLVLLGYIVVFGAVIGGYLLVGGHMGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +I + Y D++ LL+ L+ ++ E I++P+ S IFT P +L++
Sbjct: 61 LPKILRRSKYNKAMYMDLMALLFRLLSKSRQNGLLALERDIENPHQSDIFTQYPRLLKDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F DYMR+II GN +EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 YLMDFTTDYMRLIISGNMNPHEIEALMDEEIETYEQESEVPATSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ +Q ++
Sbjct: 181 VMGVVHALGSADRPAGELGALIAHAMVGTFLGILLAYGFVSPLATLLRQRSSEQVKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K L++ +NG PQ+A+E+GRK L L++RPS + + V
Sbjct: 241 IKITLLSSLNGYAPQIAVEFGRKTLFLTDRPSFTELEEHV 280
>gi|330501612|ref|YP_004378481.1| flagellar motor protein MotA [Pseudomonas mendocina NK-01]
gi|328915898|gb|AEB56729.1| flagellar motor protein MotA [Pseudomonas mendocina NK-01]
Length = 283
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 162/283 (57%), Gaps = 10/283 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + C+ GGF GG L+ PFE++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVFGCVFGGFMLSGGKLMALVHPFEVMIIGGAALGAFLQANPGSMFMTVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L +FG + Y +VLKLLY ++ ++ E ++DP S IF+ P V
Sbjct: 61 S----LSMFGSR-FTHAYYLEVLKLLYEILNKSRREGMMAIEADVEDPNASPIFSKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T FICDY+R++ GN +E+E L D E+ + E P HA++ + + +PA+G
Sbjct: 116 LKDARMTAFICDYLRIMSSGNMAPHELEGLFDMELASLKEEVEHPAHAVAKVADGMPAMG 175
Query: 177 IVGAILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M L+++ +G +G +L GT LGI+ SY PL+ ++ ++
Sbjct: 176 IVAAVLGIVITMSILAEADNAQIGEKVGTALVGTFLGILASYGFFGPLSGALEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
LY +K L+A +G P +A+E+GRKVL + RPS + Q
Sbjct: 236 NLYEAIKATLVASASGMPPTLAVEFGRKVLYPAHRPSFSELEQ 278
>gi|186473030|ref|YP_001860372.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
gi|184195362|gb|ACC73326.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
Length = 289
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 163/289 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + +IG F +GG+ L+QPFE++ + GA +G FV++NP+ V+K + +
Sbjct: 1 MFVAIGWLLVVGSVIGSFVGVGGHLPALVQPFELLCIFGAAIGAFVVSNPVSVLKKTIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F A ++ Y +++ LLY L+ +K E ++ P S +F VL+++
Sbjct: 61 LPGCFKGGAYSKEIYLELIALLYELLQKARKEGMMALEADVNAPEESALFQKYSHVLKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE++ E P +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSTGNVNVLEMQDLMDEELETHHAESSVPANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y P+ + + + + Y
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPVADLLNAKGRAEAKPYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A ++G P VA+E+GRKVL ++RPS + + V K A
Sbjct: 241 VKAVLLASLSGYAPPVAVEFGRKVLFTADRPSFQELDDAVRATKMPKSA 289
>gi|193065493|ref|ZP_03046562.1| chemotaxis protein MotA [Escherichia coli E22]
gi|192926898|gb|EDV81523.1| chemotaxis protein MotA [Escherichia coli E22]
Length = 295
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 163/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSVETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|289207763|ref|YP_003459829.1| chemotaxis (motility protein A) transmembrane [Thioalkalivibrio sp.
K90mix]
gi|288943394|gb|ADC71093.1| putative chemotaxis (motility protein A) transmembrane
[Thioalkalivibrio sp. K90mix]
Length = 283
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 160/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GGF A GG+ ++ QP+E +I+ GA LG F++ANP +V+ S
Sbjct: 1 MKYILGFLVVLFAVFGGFAAHGGDLLVIWQPYEYIIIGGAALGSFLIANPPRVVLTVFKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ ++ Y D+L L+Y L +K EN I++P NS +F + P VL ++
Sbjct: 61 LPKLLQGSKYKREDYLDLLALMYKLFTKARKEGLMGVENDIEEPENSELFQAHPRVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI DYMR+II G+ +E++ LMD +++ E KP HA+ + ++LP GIV A
Sbjct: 121 HAMEFITDYMRLIISGSMNPHELDALMDLDLETHHEEAHKPSHAVYRVADALPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ +++G + +L G+ LGI+L+Y P ++ +++ ++ +
Sbjct: 181 VLGIVNTMGSIGGPIEVIGMNVAAALVGSFLGILLAYGFVGPTSAALEARAQEEGKFLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK ++A + G PQVA+E+GRK + + RP+
Sbjct: 241 VKACILANVQGYSPQVAVEFGRKTMEGAMRPTF 273
>gi|192360488|ref|YP_001981666.1| chemotaxis motA protein [Cellvibrio japonicus Ueda107]
gi|190686653|gb|ACE84331.1| chemotaxis motA protein [Cellvibrio japonicus Ueda107]
Length = 285
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 168/292 (57%), Gaps = 11/292 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKV----IKD 56
M+ I+G+ + + C+IGGF GGN L+ P EI+I+ GA G ++ NPL V +K
Sbjct: 1 MNIILGIIVVLGCVIGGFVIHGGNALALMSPIEIMIICGASFGAMIIGNPLSVTINVVKS 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+G +L+ Y + Y D+L LLY ++ ++ E I++P +S IF + P +
Sbjct: 61 AG-ALMTPSKYNKI---FYLDMLTLLYDILNKTRREGLMAIEGDIEEPESSPIFANYPEI 116
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L+++ + FICDY+R+++ GN +E+E+LM++E++ E AI + + LP G
Sbjct: 117 LKDHHIVEFICDYLRIMVAGNMAPHELESLMEQELEGHHQEASIVPGAIQNAADGLPGFG 176
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++ MG + P +G ++ +L GTLLGI+ +Y P +S + + R
Sbjct: 177 IVAAVLGVVITMGKIGGPPSEIGASVAAALVGTLLGILFAYGFIGPFSSYLNHKVRDESR 236
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+ +K L+A MNG PQVA+E+GRKVL S RPS + + QY +KK
Sbjct: 237 AFECIKAVLVASMNGVPPQVAVEFGRKVLFHSVRPSFSELEE---QYRASKK 285
>gi|323152619|gb|EFZ38895.1| chemotaxis protein motA [Escherichia coli EPECa14]
Length = 295
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLSTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|319764524|ref|YP_004128461.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330826740|ref|YP_004390043.1| flagellar motor stator protein MotA [Alicycliphilus denitrificans
K601]
gi|317119085|gb|ADV01574.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329312112|gb|AEB86527.1| flagellar motor stator protein MotA [Alicycliphilus denitrificans
K601]
Length = 286
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 154/275 (56%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G +T C+ G F A GGN ++++ PFE++ + GA G FV+ N KV+K +
Sbjct: 1 MFVILGYLVTFGCVFGVFIAHGGNIKVVLEALPFEMITIGGAAAGAFVVNNQPKVLKATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++ + Y ++L +LY ++ +K E ++ P +S IF PTV
Sbjct: 61 AMLPQVLKGNKYTKARYMELLAMLYEILQKARKEGLMAIEADVESPQDSEIFKKFPTVGT 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN ++EIE LMD EID E P A++ + +LPA GIV
Sbjct: 121 DHHVLEFTTDYLRMMVSGNLNAHEIEALMDSEIDTHHQEAHAPVAALTRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y L PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIASALVGTFLGILLAYGLVEPLAGLLEQKAEDAGKEF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A M G P AIE+GRKVL +RPS
Sbjct: 241 ACIKSTLLASMQGYNPSTAIEFGRKVLFSGDRPSF 275
>gi|157156438|ref|YP_001463196.1| flagellar motor protein MotA [Escherichia coli E24377A]
gi|170681052|ref|YP_001743352.1| flagellar motor protein MotA [Escherichia coli SMS-3-5]
gi|191168080|ref|ZP_03029879.1| chemotaxis protein MotA [Escherichia coli B7A]
gi|194429332|ref|ZP_03061858.1| chemotaxis protein MotA [Escherichia coli B171]
gi|194434129|ref|ZP_03066398.1| chemotaxis protein MotA [Shigella dysenteriae 1012]
gi|209919316|ref|YP_002293400.1| flagellar motor protein MotA [Escherichia coli SE11]
gi|256022445|ref|ZP_05436310.1| flagellar motor protein MotA [Escherichia sp. 4_1_40B]
gi|260868488|ref|YP_003234890.1| proton conductor component MotA [Escherichia coli O111:H- str.
11128]
gi|293410202|ref|ZP_06653778.1| conserved hypothetical protein [Escherichia coli B354]
gi|293415205|ref|ZP_06657848.1| chemotaxis protein MotA [Escherichia coli B185]
gi|300917527|ref|ZP_07134184.1| flagellar motor protein MotA [Escherichia coli MS 115-1]
gi|300924983|ref|ZP_07140908.1| flagellar motor protein MotA [Escherichia coli MS 182-1]
gi|301327681|ref|ZP_07220888.1| flagellar motor protein MotA [Escherichia coli MS 78-1]
gi|307314198|ref|ZP_07593808.1| proton conductor component MotA [Escherichia coli W]
gi|309795999|ref|ZP_07690412.1| flagellar motor protein MotA [Escherichia coli MS 145-7]
gi|331653300|ref|ZP_08354305.1| chemotaxis protein MotA [Escherichia coli M718]
gi|331668587|ref|ZP_08369435.1| chemotaxis protein MotA [Escherichia coli TA271]
gi|157078468|gb|ABV18176.1| chemotaxis protein MotA [Escherichia coli E24377A]
gi|170518770|gb|ACB16948.1| chemotaxis protein MotA [Escherichia coli SMS-3-5]
gi|190901878|gb|EDV61628.1| chemotaxis protein MotA [Escherichia coli B7A]
gi|194412639|gb|EDX28935.1| chemotaxis protein MotA [Escherichia coli B171]
gi|194417673|gb|EDX33773.1| chemotaxis protein MotA [Shigella dysenteriae 1012]
gi|209912575|dbj|BAG77649.1| proton conductor component of motor [Escherichia coli SE11]
gi|257764844|dbj|BAI36339.1| proton conductor component MotA [Escherichia coli O111:H- str.
11128]
gi|284921809|emb|CBG34882.1| chemotaxis protein MotA (motility protein A) [Escherichia coli 042]
gi|291432853|gb|EFF05832.1| chemotaxis protein MotA [Escherichia coli B185]
gi|291470670|gb|EFF13154.1| conserved hypothetical protein [Escherichia coli B354]
gi|300415232|gb|EFJ98542.1| flagellar motor protein MotA [Escherichia coli MS 115-1]
gi|300418858|gb|EFK02169.1| flagellar motor protein MotA [Escherichia coli MS 182-1]
gi|300845776|gb|EFK73536.1| flagellar motor protein MotA [Escherichia coli MS 78-1]
gi|306906167|gb|EFN36685.1| proton conductor component MotA [Escherichia coli W]
gi|308120449|gb|EFO57711.1| flagellar motor protein MotA [Escherichia coli MS 145-7]
gi|315061196|gb|ADT75523.1| proton conductor component of flagella motor [Escherichia coli W]
gi|320177400|gb|EFW52401.1| Flagellar motor rotation protein MotA [Shigella dysenteriae CDC
74-1112]
gi|320178161|gb|EFW53138.1| Flagellar motor rotation protein MotA [Shigella boydii ATCC 9905]
gi|320198586|gb|EFW73186.1| Flagellar motor rotation protein MotA [Escherichia coli EC4100B]
gi|323158624|gb|EFZ44638.1| chemotaxis protein motA [Escherichia coli E128010]
gi|323180689|gb|EFZ66234.1| chemotaxis protein motA [Escherichia coli 1180]
gi|323186333|gb|EFZ71683.1| chemotaxis protein motA [Escherichia coli 1357]
gi|323378227|gb|ADX50495.1| flagellar motor protein MotA [Escherichia coli KO11]
gi|323968312|gb|EGB63719.1| chemotaxis protein MotA [Escherichia coli M863]
gi|323977925|gb|EGB73011.1| chemotaxis protein MotA [Escherichia coli TW10509]
gi|324017972|gb|EGB87191.1| flagellar motor protein MotA [Escherichia coli MS 117-3]
gi|324118950|gb|EGC12839.1| chemotaxis protein MotA [Escherichia coli E1167]
gi|327253020|gb|EGE64674.1| chemotaxis protein motA [Escherichia coli STEC_7v]
gi|331049398|gb|EGI21470.1| chemotaxis protein MotA [Escherichia coli M718]
gi|331063781|gb|EGI35692.1| chemotaxis protein MotA [Escherichia coli TA271]
Length = 295
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|300722596|ref|YP_003711886.1| proton conductor component of motor, torque generator [Xenorhabdus
nematophila ATCC 19061]
gi|297629103|emb|CBJ89688.1| proton conductor component of motor, torque generator [Xenorhabdus
nematophila ATCC 19061]
Length = 293
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 166/280 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + +IGG+ +GG+ L QP E +I+AGAG+G F++ N K IK +
Sbjct: 1 MLVLLGYIVVFGAVIGGYLLVGGHMGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ L + L+ ++ E I++P+ S IFT P +L++
Sbjct: 61 LPKVLRRSKYNKAMYMDLMALQFRLLSKSRQHGLLALERDIENPHQSDIFTQYPRLLKDQ 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DYMR+II GN +EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 QLMDFITDYMRLIISGNMNPHEIEALMDEEIETYEQESEVPATSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ +Q ++
Sbjct: 181 VMGVVHALGSADRPAGELGMLIAHAMVGTFLGILLAYGFVSPLATLLRQRSSEQVKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K L++ ++G PQ+A+E+GRK L L++RPS + + V
Sbjct: 241 IKVTLLSSLHGYAPQIAVEFGRKTLFLTDRPSFTELEEHV 280
>gi|91211114|ref|YP_541100.1| flagellar motor protein MotA [Escherichia coli UTI89]
gi|117624040|ref|YP_852953.1| flagellar motor protein MotA [Escherichia coli APEC O1]
gi|215487101|ref|YP_002329532.1| flagellar motor protein MotA [Escherichia coli O127:H6 str.
E2348/69]
gi|218558753|ref|YP_002391666.1| flagellar motor protein MotA [Escherichia coli S88]
gi|218689886|ref|YP_002398098.1| flagellar motor protein MotA [Escherichia coli ED1a]
gi|227885681|ref|ZP_04003486.1| flagellar motor protein MotA [Escherichia coli 83972]
gi|237705848|ref|ZP_04536329.1| flagellar motor protein MotA [Escherichia sp. 3_2_53FAA]
gi|300935868|ref|ZP_07150826.1| flagellar motor protein MotA [Escherichia coli MS 21-1]
gi|301050753|ref|ZP_07197611.1| flagellar motor protein MotA [Escherichia coli MS 185-1]
gi|306814280|ref|ZP_07448446.1| flagellar motor protein MotA [Escherichia coli NC101]
gi|312967093|ref|ZP_07781311.1| chemotaxis protein motA [Escherichia coli 2362-75]
gi|331647485|ref|ZP_08348577.1| chemotaxis protein MotA [Escherichia coli M605]
gi|331657938|ref|ZP_08358900.1| chemotaxis protein MotA [Escherichia coli TA206]
gi|331683397|ref|ZP_08383998.1| chemotaxis protein MotA [Escherichia coli H299]
gi|91072688|gb|ABE07569.1| chemotaxis MotA protein [Escherichia coli UTI89]
gi|115513164|gb|ABJ01239.1| flagellar motor protein MotA [Escherichia coli APEC O1]
gi|215265173|emb|CAS09561.1| proton conductor component MotA of flagella motor [Escherichia coli
O127:H6 str. E2348/69]
gi|218365522|emb|CAR03249.1| proton conductor component of flagella motor [Escherichia coli S88]
gi|218427450|emb|CAR08347.2| proton conductor component of flagella motor [Escherichia coli
ED1a]
gi|222033637|emb|CAP76378.1| chemotaxis protein motA [Escherichia coli LF82]
gi|226900605|gb|EEH86864.1| flagellar motor protein MotA [Escherichia sp. 3_2_53FAA]
gi|227837254|gb|EEJ47720.1| flagellar motor protein MotA [Escherichia coli 83972]
gi|281178958|dbj|BAI55288.1| proton conductor component of motor [Escherichia coli SE15]
gi|294491110|gb|ADE89866.1| chemotaxis protein MotA [Escherichia coli IHE3034]
gi|300297570|gb|EFJ53955.1| flagellar motor protein MotA [Escherichia coli MS 185-1]
gi|300458980|gb|EFK22473.1| flagellar motor protein MotA [Escherichia coli MS 21-1]
gi|305852439|gb|EFM52890.1| flagellar motor protein MotA [Escherichia coli NC101]
gi|307553907|gb|ADN46682.1| proton conductor component of motor [Escherichia coli ABU 83972]
gi|307626627|gb|ADN70931.1| flagellar motor protein MotA [Escherichia coli UM146]
gi|312288557|gb|EFR16459.1| chemotaxis protein motA [Escherichia coli 2362-75]
gi|312946488|gb|ADR27315.1| flagellar motor protein MotA [Escherichia coli O83:H1 str. NRG
857C]
gi|315286596|gb|EFU46029.1| flagellar motor protein MotA [Escherichia coli MS 110-3]
gi|320194395|gb|EFW69026.1| Flagellar motor rotation protein MotA [Escherichia coli WV_060327]
gi|323186772|gb|EFZ72092.1| chemotaxis protein motA [Escherichia coli RN587/1]
gi|323952391|gb|EGB48264.1| chemotaxis protein MotA [Escherichia coli H252]
gi|323956292|gb|EGB52035.1| chemotaxis protein MotA [Escherichia coli H263]
gi|324007254|gb|EGB76473.1| flagellar motor protein MotA [Escherichia coli MS 57-2]
gi|330911700|gb|EGH40210.1| flagellar motor rotation protein MotA [Escherichia coli AA86]
gi|331043209|gb|EGI15347.1| chemotaxis protein MotA [Escherichia coli M605]
gi|331056186|gb|EGI28195.1| chemotaxis protein MotA [Escherichia coli TA206]
gi|331079612|gb|EGI50809.1| chemotaxis protein MotA [Escherichia coli H299]
Length = 295
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|260844300|ref|YP_003222078.1| proton conductor component MotA [Escherichia coli O103:H2 str.
12009]
gi|257759447|dbj|BAI30944.1| proton conductor component MotA [Escherichia coli O103:H2 str.
12009]
Length = 295
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|226327781|ref|ZP_03803299.1| hypothetical protein PROPEN_01654 [Proteus penneri ATCC 35198]
gi|225203485|gb|EEG85839.1| hypothetical protein PROPEN_01654 [Proteus penneri ATCC 35198]
Length = 287
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 163/278 (58%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+IGG+ +GG+ L QP E +I+ GAG+G F++ N + I + L ++ +
Sbjct: 3 AVIGGYLLVGGSLGALYQPAEFIIIFGAGIGAFIVGNNGRAIVSTMKILPKLLRSTNYNK 62
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
Y D++ L++ L+ ++ E I++P S IF+ P ++++ + +FI DYMR+
Sbjct: 63 AMYMDLMALMFRLLSKARQNGMLALERDIENPQQSDIFSQYPRIMKDVYMLSFITDYMRL 122
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ GN YEIE+LMDEEI E P +S MG+SLPA GIV A++G++ A+G
Sbjct: 123 MVTGNMNPYEIESLMDEEIATFEEESEVPATGLSAMGDSLPAFGIVAAVMGVVNALGAAD 182
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +G IG ++ GT LGI+L+Y +PL S+++ +Q ++ +K L++ MNG
Sbjct: 183 RPAGEMGVLIGHAMVGTFLGILLAYGFISPLASRLRQRSSQQMKMMECIKTTLLSSMNGY 242
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
PQ+A+E+GRK L L++RPS + + V Q +A+
Sbjct: 243 APQIAVEFGRKTLFLADRPSFIELEEHVRQVRTPMQAN 280
>gi|260855830|ref|YP_003229721.1| proton conductor component MotA [Escherichia coli O26:H11 str.
11368]
gi|257754479|dbj|BAI25981.1| proton conductor component MotA [Escherichia coli O26:H11 str.
11368]
Length = 295
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|110642006|ref|YP_669736.1| flagellar motor protein MotA [Escherichia coli 536]
gi|191173025|ref|ZP_03034559.1| chemotaxis protein MotA [Escherichia coli F11]
gi|300982220|ref|ZP_07175932.1| flagellar motor protein MotA [Escherichia coli MS 200-1]
gi|110343598|gb|ABG69835.1| chemotaxis MotA protein [Escherichia coli 536]
gi|190906736|gb|EDV66341.1| chemotaxis protein MotA [Escherichia coli F11]
gi|300307290|gb|EFJ61810.1| flagellar motor protein MotA [Escherichia coli MS 200-1]
Length = 295
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRTKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|218705390|ref|YP_002412909.1| flagellar motor protein MotA [Escherichia coli UMN026]
gi|293405382|ref|ZP_06649374.1| chemotaxis protein motA [Escherichia coli FVEC1412]
gi|298381026|ref|ZP_06990625.1| chemotaxis protein MotA [Escherichia coli FVEC1302]
gi|300899143|ref|ZP_07117424.1| flagellar motor protein MotA [Escherichia coli MS 198-1]
gi|218432487|emb|CAR13380.1| proton conductor component of flagella motor [Escherichia coli
UMN026]
gi|291427590|gb|EFF00617.1| chemotaxis protein motA [Escherichia coli FVEC1412]
gi|298278468|gb|EFI19982.1| chemotaxis protein MotA [Escherichia coli FVEC1302]
gi|300357233|gb|EFJ73103.1| flagellar motor protein MotA [Escherichia coli MS 198-1]
Length = 295
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|331673415|ref|ZP_08374183.1| chemotaxis protein MotA [Escherichia coli TA280]
gi|331069613|gb|EGI41000.1| chemotaxis protein MotA [Escherichia coli TA280]
Length = 295
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALAGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|293395564|ref|ZP_06639847.1| lateral flagellar motor protein MotA [Serratia odorifera DSM 4582]
gi|291421883|gb|EFE95129.1| lateral flagellar motor protein MotA [Serratia odorifera DSM 4582]
Length = 298
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 161/270 (59%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +L +
Sbjct: 6 ILGYLVVLGAVFGGYMIVGGHLGALYQPAEFLIIGGAGVGAFIVGNNGKAIKSTLRALPK 65
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ ++ Y D++ LL+ L+ ++ E ID+P S IF++ P +L +N L
Sbjct: 66 LMRRSKYSKELYMDLMALLFRLLAKSRQQGMLSLEFDIDNPQESEIFSNYPRILADNHLV 125
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI DY+R+++ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A++G
Sbjct: 126 EFITDYLRLMVSGNMNAFEIEALMDEEIETFEQESEVPAGSLAMVGDSLPAFGIVAAVMG 185
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++ +K
Sbjct: 186 VVHALASADRPAAELGALIANAMVGTFLGILLAYGFISPLATLLRQKSAENVKMMQCIKV 245
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 246 TLLSSLNGYAPQIAVEFGRKTLYTTERPSF 275
>gi|149928471|ref|ZP_01916706.1| putative chemotaxis (motility protein A) transmembrane [Limnobacter
sp. MED105]
gi|149822805|gb|EDM82056.1| putative chemotaxis (motility protein A) transmembrane [Limnobacter
sp. MED105]
Length = 328
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 156/274 (56%), Gaps = 1/274 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I ++GGF MGG+ L QP E++I+ G LG F+++N ++K +G +
Sbjct: 42 MLVAIGFVIVIFSVLGGFAFMGGHLVTLWQPVEVLIIGGGALGAFIVSNTPSILKATGKA 101
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F A+ + Y ++ L+Y ++ ++K E +++P S +F P VL ++
Sbjct: 102 LGGAFKPSAITKAFYMSLMALMYEILTKVRKEGLMSIEGDVEEPEQSPLFQKYPEVLADH 161
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN EIENLMD E++ E P A+ M + LPA GIV A
Sbjct: 162 HIVEFLTDYLRLMVSGNLNPMEIENLMDGELETHHQEAHTPQSAVQQMADGLPAFGIVAA 221
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ MG++ Q S LG I +L GT LGI+L+Y PL S I + + +
Sbjct: 222 VMGVVHVMGSVGQVSNAELGVMIAAALVGTFLGILLAYGFVGPLASIINHKIAESSKPFE 281
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L+A +NG P +A+E+GRKVL +ERP+
Sbjct: 282 CVKTTLLASLNGYSPALAVEFGRKVLYSTERPTF 315
>gi|315296508|gb|EFU55805.1| flagellar motor protein MotA [Escherichia coli MS 16-3]
Length = 295
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILFGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|283785635|ref|YP_003365500.1| chemotaxis protein MotA (motility protein A) [Citrobacter rodentium
ICC168]
gi|282949089|emb|CBG88695.1| chemotaxis protein MotA (motility protein A) [Citrobacter rodentium
ICC168]
Length = 294
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 158/273 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYMMTGGHLGALYQPAEFVIIGGAGIGAFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ MG+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLALMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|261821135|ref|YP_003259241.1| flagellar motor protein MotA [Pectobacterium wasabiae WPP163]
gi|261605148|gb|ACX87634.1| flagellar motor protein MotA [Pectobacterium wasabiae WPP163]
Length = 295
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 163/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA LG F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAALGAFIVGNNGKAIKATVRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ LL+ +M ++ E ID+P S IF+S P +L ++
Sbjct: 61 LPLLFKGSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILSDS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A
Sbjct: 121 NIVEFITDYLRLMVSGNMNAFEIETLMDEEIETIEHESEIPASSLTMMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSF 273
>gi|16129842|ref|NP_416404.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. MG1655]
gi|89108730|ref|AP_002510.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. W3110]
gi|157161362|ref|YP_001458680.1| flagellar motor protein MotA [Escherichia coli HS]
gi|170019765|ref|YP_001724719.1| flagellar motor protein MotA [Escherichia coli ATCC 8739]
gi|170081545|ref|YP_001730865.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. DH10B]
gi|188495499|ref|ZP_03002769.1| chemotaxis protein MotA [Escherichia coli 53638]
gi|193069861|ref|ZP_03050810.1| chemotaxis protein MotA [Escherichia coli E110019]
gi|218554478|ref|YP_002387391.1| flagellar motor protein MotA [Escherichia coli IAI1]
gi|218695456|ref|YP_002403123.1| flagellar motor protein MotA [Escherichia coli 55989]
gi|238901105|ref|YP_002926901.1| proton conductor component of flagella motor [Escherichia coli
BW2952]
gi|253773153|ref|YP_003035984.1| flagellar motor protein MotA [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161950|ref|YP_003045058.1| flagellar motor protein MotA [Escherichia coli B str. REL606]
gi|256017906|ref|ZP_05431771.1| flagellar motor protein MotA [Shigella sp. D9]
gi|293446277|ref|ZP_06662699.1| chemotaxis protein motA [Escherichia coli B088]
gi|300819875|ref|ZP_07100060.1| flagellar motor protein MotA [Escherichia coli MS 107-1]
gi|300928924|ref|ZP_07144428.1| flagellar motor protein MotA [Escherichia coli MS 187-1]
gi|300951514|ref|ZP_07165349.1| flagellar motor protein MotA [Escherichia coli MS 116-1]
gi|300956596|ref|ZP_07168875.1| flagellar motor protein MotA [Escherichia coli MS 175-1]
gi|301645592|ref|ZP_07245521.1| flagellar motor protein MotA [Escherichia coli MS 146-1]
gi|307138555|ref|ZP_07497911.1| flagellar motor protein MotA [Escherichia coli H736]
gi|312969934|ref|ZP_07784117.1| chemotaxis protein motA [Escherichia coli 1827-70]
gi|331642508|ref|ZP_08343643.1| chemotaxis protein MotA [Escherichia coli H736]
gi|331677775|ref|ZP_08378450.1| chemotaxis protein MotA [Escherichia coli H591]
gi|332278937|ref|ZP_08391350.1| proton conductor component of flagella motor [Shigella sp. D9]
gi|127249|sp|P09348|MOTA_ECOLI RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|146882|gb|AAA24177.1| chemotaxis protein MotA [Escherichia coli]
gi|1736549|dbj|BAA15711.1| proton conductor component of flagella motor [Escherichia coli str.
K12 substr. W3110]
gi|1788199|gb|AAC74960.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. MG1655]
gi|157067042|gb|ABV06297.1| chemotaxis protein MotA [Escherichia coli HS]
gi|169754693|gb|ACA77392.1| proton conductor component of motor [Escherichia coli ATCC 8739]
gi|169889380|gb|ACB03087.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. DH10B]
gi|188490698|gb|EDU65801.1| chemotaxis protein MotA [Escherichia coli 53638]
gi|192956761|gb|EDV87215.1| chemotaxis protein MotA [Escherichia coli E110019]
gi|218352188|emb|CAU97929.1| proton conductor component of flagella motor [Escherichia coli
55989]
gi|218361246|emb|CAQ98830.1| proton conductor component of flagella motor [Escherichia coli
IAI1]
gi|238863327|gb|ACR65325.1| proton conductor component of flagella motor [Escherichia coli
BW2952]
gi|242377611|emb|CAQ32367.1| MotA protein, proton conductor component of motor; no effect on
switching, subunit of Flagellar Motor Complex and
Flagellum [Escherichia coli BL21(DE3)]
gi|253324197|gb|ACT28799.1| Flagellar motor component-like protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973851|gb|ACT39522.1| flagellar motor protein MotA [Escherichia coli B str. REL606]
gi|253978045|gb|ACT43715.1| flagellar motor protein MotA [Escherichia coli BL21(DE3)]
gi|260448987|gb|ACX39409.1| flagellar motor protein MotA [Escherichia coli DH1]
gi|291323107|gb|EFE62535.1| chemotaxis protein motA [Escherichia coli B088]
gi|300316578|gb|EFJ66362.1| flagellar motor protein MotA [Escherichia coli MS 175-1]
gi|300449264|gb|EFK12884.1| flagellar motor protein MotA [Escherichia coli MS 116-1]
gi|300463078|gb|EFK26571.1| flagellar motor protein MotA [Escherichia coli MS 187-1]
gi|300527572|gb|EFK48634.1| flagellar motor protein MotA [Escherichia coli MS 107-1]
gi|301076124|gb|EFK90930.1| flagellar motor protein MotA [Escherichia coli MS 146-1]
gi|309702113|emb|CBJ01428.1| chemotaxis protein MotA (motility protein A) [Escherichia coli ETEC
H10407]
gi|310338219|gb|EFQ03308.1| chemotaxis protein motA [Escherichia coli 1827-70]
gi|315136533|dbj|BAJ43692.1| flagellar motor protein MotA [Escherichia coli DH1]
gi|315617884|gb|EFU98482.1| chemotaxis protein motA [Escherichia coli 3431]
gi|323937149|gb|EGB33429.1| chemotaxis protein MotA [Escherichia coli E1520]
gi|323940441|gb|EGB36632.1| chemotaxis protein MotA [Escherichia coli E482]
gi|323948224|gb|EGB44212.1| chemotaxis protein MotA [Escherichia coli H120]
gi|323961945|gb|EGB57544.1| chemotaxis protein MotA [Escherichia coli H489]
gi|331039306|gb|EGI11526.1| chemotaxis protein MotA [Escherichia coli H736]
gi|331074235|gb|EGI45555.1| chemotaxis protein MotA [Escherichia coli H591]
gi|332089625|gb|EGI94727.1| chemotaxis protein motA [Shigella boydii 5216-82]
gi|332101289|gb|EGJ04635.1| proton conductor component of flagella motor [Shigella sp. D9]
Length = 295
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|15802302|ref|NP_288327.1| flagellar motor protein MotA [Escherichia coli O157:H7 EDL933]
gi|15831854|ref|NP_310627.1| flagellar motor protein MotA [Escherichia coli O157:H7 str. Sakai]
gi|168757930|ref|ZP_02782937.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4401]
gi|168762312|ref|ZP_02787319.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4501]
gi|168770877|ref|ZP_02795884.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4486]
gi|168776559|ref|ZP_02801566.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4196]
gi|168783194|ref|ZP_02808201.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4076]
gi|168789759|ref|ZP_02814766.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC869]
gi|168801870|ref|ZP_02826877.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC508]
gi|195939594|ref|ZP_03084976.1| flagellar motor protein MotA [Escherichia coli O157:H7 str. EC4024]
gi|208810209|ref|ZP_03252085.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4206]
gi|208816669|ref|ZP_03257789.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4045]
gi|208819593|ref|ZP_03259913.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4042]
gi|209396503|ref|YP_002270974.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4115]
gi|217328719|ref|ZP_03444800.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. TW14588]
gi|254793514|ref|YP_003078351.1| flagellar motor protein MotA [Escherichia coli O157:H7 str.
TW14359]
gi|261227609|ref|ZP_05941890.1| proton conductor component of flagella motor [Escherichia coli
O157:H7 str. FRIK2000]
gi|261258225|ref|ZP_05950758.1| proton conductor component of flagella motor [Escherichia coli
O157:H7 str. FRIK966]
gi|291283072|ref|YP_003499890.1| Chemotaxis protein MotA [Escherichia coli O55:H7 str. CB9615]
gi|12515954|gb|AAG56880.1|AE005411_4 proton conductor component of motor; no effect on switching
[Escherichia coli O157:H7 str. EDL933]
gi|13362068|dbj|BAB36023.1| proton conductor component of motor [Escherichia coli O157:H7 str.
Sakai]
gi|187768064|gb|EDU31908.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4196]
gi|188999438|gb|EDU68424.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4076]
gi|189355203|gb|EDU73622.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4401]
gi|189360283|gb|EDU78702.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4486]
gi|189367341|gb|EDU85757.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4501]
gi|189370701|gb|EDU89117.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC869]
gi|189376043|gb|EDU94459.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC508]
gi|208724725|gb|EDZ74432.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4206]
gi|208731012|gb|EDZ79701.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4045]
gi|208739716|gb|EDZ87398.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4042]
gi|209157903|gb|ACI35336.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4115]
gi|209767208|gb|ACI81916.1| proton conductor component of motor [Escherichia coli]
gi|209767210|gb|ACI81917.1| proton conductor component of motor [Escherichia coli]
gi|209767212|gb|ACI81918.1| proton conductor component of motor [Escherichia coli]
gi|209767214|gb|ACI81919.1| proton conductor component of motor [Escherichia coli]
gi|209767216|gb|ACI81920.1| proton conductor component of motor [Escherichia coli]
gi|217318066|gb|EEC26493.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. TW14588]
gi|254592914|gb|ACT72275.1| proton conductor component of flagella motor [Escherichia coli
O157:H7 str. TW14359]
gi|290762945|gb|ADD56906.1| Chemotaxis protein MotA [Escherichia coli O55:H7 str. CB9615]
gi|320188590|gb|EFW63252.1| Flagellar motor rotation protein MotA [Escherichia coli O157:H7
str. EC1212]
gi|320641744|gb|EFX11132.1| flagellar motor protein MotA [Escherichia coli O157:H7 str. G5101]
gi|320647104|gb|EFX15937.1| flagellar motor protein MotA [Escherichia coli O157:H- str. 493-89]
gi|320652387|gb|EFX20685.1| flagellar motor protein MotA [Escherichia coli O157:H- str. H 2687]
gi|320657988|gb|EFX25750.1| flagellar motor protein MotA [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320658561|gb|EFX26255.1| flagellar motor protein MotA [Escherichia coli O55:H7 str. USDA
5905]
gi|320668459|gb|EFX35286.1| flagellar motor protein MotA [Escherichia coli O157:H7 str. LSU-61]
gi|326342268|gb|EGD66049.1| Flagellar motor rotation protein MotA [Escherichia coli O157:H7
str. 1044]
gi|326343819|gb|EGD67581.1| Flagellar motor rotation protein MotA [Escherichia coli O157:H7
str. 1125]
Length = 295
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P ++ ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRIIADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|291085222|ref|ZP_06352452.2| chemotaxis MotA protein [Citrobacter youngae ATCC 29220]
gi|291072390|gb|EFE10499.1| chemotaxis MotA protein [Citrobacter youngae ATCC 29220]
Length = 301
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 159/270 (58%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + ++
Sbjct: 10 LLGYLVVIGTVFGGYMMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKAIPM 69
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + Y D+L LLY LM ++ E I++P S IF S P +L + +
Sbjct: 70 LFRRSKYTKAMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAVML 129
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G
Sbjct: 130 DFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAVMG 189
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+ + + LG+ I ++ GT LGI+L+Y +PL S ++ + ++ VK
Sbjct: 190 VVHALASADRPAAELGSLIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCVKI 249
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
L++ +NG P +A+E+GRK L SERPS
Sbjct: 250 TLLSNLNGYAPPIAVEFGRKTLYSSERPSF 279
>gi|218699540|ref|YP_002407169.1| flagellar motor protein MotA [Escherichia coli IAI39]
gi|218369526|emb|CAR17295.1| proton conductor component of flagella motor [Escherichia coli
IAI39]
Length = 295
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGAFYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|301018262|ref|ZP_07182775.1| flagellar motor protein MotA [Escherichia coli MS 69-1]
gi|300399772|gb|EFJ83310.1| flagellar motor protein MotA [Escherichia coli MS 69-1]
Length = 295
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADC 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|288942641|ref|YP_003444881.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288898013|gb|ADC63849.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 284
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 155/280 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ I+G I I ++GGF A GG+ L QPFE+VI+ GA GGFV+ANP+ V+ S S
Sbjct: 1 MNFILGSLIVIASVLGGFAAGGGHIIALWQPFELVIILGAAGGGFVIANPMSVVVQSLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y + L LY L +K E I++P +S +F P +L+++
Sbjct: 61 IPALFTGAKYKKAHYMEALGFLYELFNKARKEGLMGIEPDIEEPESSALFQKYPLILKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T FI DYMR+++ GN +E+ENLMD EI+ + HA+ + + LPA GIV A
Sbjct: 121 HATEFISDYMRLVVSGNMNPFELENLMDVEIETHHHATAATSHAVQQVADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M L +G + +L GT GI++SY P+ S + ++ R
Sbjct: 181 VLGIVHTMAALGGPMSEIGGLVAAALVGTFSGILISYGFVGPIASYLGRLADEETRYLSC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A + G PQVA+E+GRK +P RP+ + Q +
Sbjct: 241 IKACILANVQGYSPQVAVEFGRKTMPPELRPNFQEFEQHL 280
>gi|313200597|ref|YP_004039255.1| flagellar motor protein mota [Methylovorus sp. MP688]
gi|312439913|gb|ADQ84019.1| flagellar motor protein MotA [Methylovorus sp. MP688]
Length = 278
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 160/274 (58%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ + + GG+ GG+ L QP E++++ G +G F++ N K +K + +L +F
Sbjct: 1 MVLAAVFGGYALAGGHLGALWQPLEVLMIFGGAIGAFIVGNNGKALKATLGALPTLFKGS 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ Y D+L LL+ ++ ++K EN +++P +S +F+ P + ++ L FI D
Sbjct: 61 KFTKALYMDLLALLFEILSKIRKDGMMSIENDVENPESSPLFSKYPALQADHHLMEFITD 120
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
Y+R++I GN ++++ENLMD EI+ E P H I+ +G+ LPA GIV A++G++ M
Sbjct: 121 YLRLMISGNMDAFQVENLMDNEIETHHQEGHVPVHCIARLGDGLPAFGIVAAVMGVVHTM 180
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
N++ P LG I +L GT LGI+L+Y PL+S ++ + ++Y VK L+A
Sbjct: 181 ENVALPPAELGILIAHALVGTFLGILLAYGFIGPLSSLLEQKLDESTKMYQTVKATLLAS 240
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+NG P +A+E+GRKVL +ERP + + V Q
Sbjct: 241 LNGYAPAIAVEFGRKVLYSTERPGFTELEEHVKQ 274
>gi|170769361|ref|ZP_02903814.1| chemotaxis protein MotA [Escherichia albertii TW07627]
gi|170121685|gb|EDS90616.1| chemotaxis protein MotA [Escherichia albertii TW07627]
Length = 295
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMTKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGMLIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|326404290|ref|YP_004284372.1| chemotaxis protein MotA [Acidiphilium multivorum AIU301]
gi|325051152|dbj|BAJ81490.1| chemotaxis protein MotA [Acidiphilium multivorum AIU301]
Length = 289
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 161/282 (57%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M T+ G+ ++C+ G F GG P + PFE++ + GA +G FV N + IK +
Sbjct: 1 MLTLGGVAFLLVCVFGVFIVTGGAIGPLLKSMPFELITIGGAAVGTFVAGNSMHDIKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ A + Y D+L LL+ L+ E HI+ P S +F P +L+
Sbjct: 61 AGFKKVLRGGAFKKADYTDLLCLLFYLVRLAATRGAMALEPHIERPEESPVFKHFPAILK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N E T ICDY+RM+ + ++IE++M E+ L E+L H + M + LPA+GIV
Sbjct: 121 NEEATAIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELHGAHTLQTMADGLPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++SQ P +LG IG +LTGT LG++L+Y + PL+ +++ + R +
Sbjct: 181 AAVLGVIKTMAHISQPPAVLGEMIGEALTGTFLGVLLAYGVVGPLSVRLRGVVEEDSRYF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+++ L+A+++G PQV++E GRK++P P+ + + + V
Sbjct: 241 EVIRAVLVAHLHGNAPQVSVEVGRKMVPNLFMPTFQELEESV 282
>gi|238756397|ref|ZP_04617707.1| hypothetical protein yruck0001_10360 [Yersinia ruckeri ATCC 29473]
gi|238705370|gb|EEP97777.1| hypothetical protein yruck0001_10360 [Yersinia ruckeri ATCC 29473]
Length = 295
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+AGAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYMMVGGHLGALYQPSEFLIIAGAGIGAFIVGNNGKAIKATLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P +L +N
Sbjct: 61 MPKLLRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIENPQESEIFSNYPRILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 ILVEFITDYLRLIVSGNMNAFEIEALMDEEIETYEQESEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQNAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|300312290|ref|YP_003776382.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
gi|300075075|gb|ADJ64474.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
Length = 286
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 165/282 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + + GGF GG+ L QP E++++ GA G F++ N K IK + +
Sbjct: 1 MLVIIGYIVVMASVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNNGKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F A + Y +++ LL+ ++ +K E I++P +S IF+ P VL ++
Sbjct: 61 LPTVFKGSAYTKALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY+R+++ GN +++IENLMD EI+ +E P H I+ +G+ +PA GIV A
Sbjct: 121 HLIEFMTDYLRLMVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL+S ++ + ++Y
Sbjct: 181 VMGVVHTMESVGIPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK L+A +NG P ++IE+GRKVL +ERP+ + + V Q
Sbjct: 241 VKVTLLASLNGYAPALSIEFGRKVLFSTERPTFLELEEHVKQ 282
>gi|227112503|ref|ZP_03826159.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 295
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 162/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA LG F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAALGAFIVGNNGKAIKATLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LL+ +M ++ E ID+P S IF+S P +L +N
Sbjct: 61 LPLLVKSSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A
Sbjct: 121 TVVEFITDYLRLMVSGNMNAFEIETLMDEEIETIEHESEVPASSLTMMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSF 273
>gi|85859044|ref|YP_461246.1| chemotaxis protein [Syntrophus aciditrophicus SB]
gi|85722135|gb|ABC77078.1| chemotaxis protein [Syntrophus aciditrophicus SB]
Length = 303
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 171/284 (60%), Gaps = 5/284 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ I +IGG+ GN +L QP E +I+ GA +GGF++++P KV+K S
Sbjct: 19 MLAIIGIVIVFTTVIGGYLLEHGNLAVLFQPAEFLIIFGAAIGGFLISSPSKVVKAVIKS 78
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF K + Y + L LL + Y +++ E+ +D P S +F+ P++L N
Sbjct: 79 ISRIFRGKTFDKKDYTEALMLLNGIFYKIRQQGLVSIESDVDSPQESPLFSQYPSILNNT 138
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
I D +R ++ +E++ L+D E+D+ E ++P +++ + ++LP +GIV A
Sbjct: 139 HAIDLITDTLRTVMTTTIAPHELDALIDHELDVYYEEMMQPAKSVNFVADALPGLGIVAA 198
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG +S+ P++LG IG +L GT +G++ Y P+ I+ + ++ LY+
Sbjct: 199 VLGVVLTMGKISEPPEVLGKCIGAALVGTFIGVLTCYGFVGPMGKNIEH-QAGENILYLT 257
Query: 241 V-KKALIAYMNGAIPQVAIEYGRKVLPLSERPS-IEIVAQEVLQ 282
V K AL+A++ G+ P+VA+E+GR+V+P ++RPS IEI +E L+
Sbjct: 258 VLKVALLAFIGGSAPKVAVEFGRRVIPANDRPSFIEI--EEALR 299
>gi|237731927|ref|ZP_04562408.1| motility protein A [Citrobacter sp. 30_2]
gi|226907466|gb|EEH93384.1| motility protein A [Citrobacter sp. 30_2]
Length = 295
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYMMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKAMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|222112257|ref|YP_002554521.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|221731701|gb|ACM34521.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 286
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 152/273 (55%), Gaps = 2/273 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G IT C+ G F A GGN +L+ PFE++ + GA LG F++ N KV+K +
Sbjct: 1 MLVILGYIITFGCVFGVFVAHGGNVQVLLTALPFEMITIGGAALGSFIVTNQPKVLKATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L ++F + Y +++ +LY ++ +K E ++ P S +F PTV
Sbjct: 61 ATLPQVFKGNKYTKARYMELMAMLYEILQKARKEGLMSIEQDVESPKESELFKKFPTVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ + F DY+RM++ GN ++EIE LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DPHVIEFTTDYLRMMVSGNLNAHEIEALMDSEIETHHAEAHAPVAALTRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y PL ++ + Y
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIASALVGTFLGILLAYGAVEPLAGLLEQKAADAAKEY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+K L+A M G P +IE+GRKVL +RP
Sbjct: 241 ECIKSTLLASMQGYNPATSIEFGRKVLFSGDRP 273
>gi|16760872|ref|NP_456489.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141436|ref|NP_804778.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213163276|ref|ZP_03348986.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213622330|ref|ZP_03375113.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647164|ref|ZP_03377217.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213855851|ref|ZP_03384091.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|25298881|pir||AG0746 motility protein A [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16503169|emb|CAD05674.1| motility protein A [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137063|gb|AAO68627.1| motility protein A [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 295
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGMGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|24113275|ref|NP_707785.1| flagellar motor protein MotA [Shigella flexneri 2a str. 301]
gi|30063342|ref|NP_837513.1| flagellar motor protein MotA [Shigella flexneri 2a str. 2457T]
gi|74311760|ref|YP_310179.1| flagellar motor protein MotA [Shigella sonnei Ss046]
gi|110805870|ref|YP_689390.1| flagellar motor protein MotA [Shigella flexneri 5 str. 8401]
gi|24052279|gb|AAN43492.1| proton conductor component of motor [Shigella flexneri 2a str. 301]
gi|30041594|gb|AAP17322.1| proton conductor component of motor [Shigella flexneri 2a str.
2457T]
gi|73855237|gb|AAZ87944.1| proton conductor component of motor [Shigella sonnei Ss046]
gi|110615418|gb|ABF04085.1| flagellar motor protein [Shigella flexneri 5 str. 8401]
gi|281601337|gb|ADA74321.1| Proton conductor component of motor [Shigella flexneri 2002017]
gi|313650106|gb|EFS14519.1| chemotaxis protein motA [Shigella flexneri 2a str. 2457T]
gi|323165314|gb|EFZ51102.1| chemotaxis protein motA [Shigella sonnei 53G]
gi|332757195|gb|EGJ87532.1| chemotaxis protein motA [Shigella flexneri 2747-71]
gi|332757450|gb|EGJ87785.1| chemotaxis protein motA [Shigella flexneri K-671]
gi|332766621|gb|EGJ96825.1| motA protein, proton conductor component of motor no effect on
switching [Shigella flexneri 2930-71]
gi|333004151|gb|EGK23683.1| chemotaxis protein motA [Shigella flexneri K-272]
gi|333017628|gb|EGK36940.1| chemotaxis protein motA [Shigella flexneri K-304]
gi|333017761|gb|EGK37068.1| chemotaxis protein motA [Shigella flexneri K-227]
Length = 295
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G + A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGGVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|16765265|ref|NP_460880.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56413158|ref|YP_150233.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62180500|ref|YP_216917.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161613517|ref|YP_001587482.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167552437|ref|ZP_02346190.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167994229|ref|ZP_02575321.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168234011|ref|ZP_02659069.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168238557|ref|ZP_02663615.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168241556|ref|ZP_02666488.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259798|ref|ZP_02681771.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168462542|ref|ZP_02696473.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168820751|ref|ZP_02832751.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444912|ref|YP_002041190.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450514|ref|YP_002045978.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194468783|ref|ZP_03074767.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735541|ref|YP_002114960.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248635|ref|YP_002146097.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197265988|ref|ZP_03166062.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198243470|ref|YP_002215159.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389572|ref|ZP_03216183.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204931070|ref|ZP_03221896.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|224583573|ref|YP_002637371.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912500|ref|ZP_04656337.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|2494510|sp|P55891|MOTA_SALTY RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|1764127|gb|AAC45265.1| MotA [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|6045177|dbj|BAA85316.1| MotA protein [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|16420460|gb|AAL20839.1| proton conductor component of motor [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56127415|gb|AAV76921.1| motility protein A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62128133|gb|AAX65836.1| proton conductor component of motor, torque generator [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161362881|gb|ABX66649.1| hypothetical protein SPAB_01237 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403575|gb|ACF63797.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408818|gb|ACF69037.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194455147|gb|EDX43986.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194711043|gb|ACF90264.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195634498|gb|EDX52850.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197212338|gb|ACH49735.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197244243|gb|EDY26863.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288649|gb|EDY28024.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937986|gb|ACH75319.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602017|gb|EDZ00563.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320114|gb|EDZ05319.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205322878|gb|EDZ10717.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205327857|gb|EDZ14621.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205331990|gb|EDZ18754.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205339404|gb|EDZ26168.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342756|gb|EDZ29520.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350824|gb|EDZ37455.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|224468100|gb|ACN45930.1| flagellar motor protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|267993910|gb|ACY88795.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|312912917|dbj|BAJ36891.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085457|emb|CBY95238.1| Chemotaxis protein motA Motility protein A [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224567|gb|EFX49630.1| Flagellar motor rotation protein MotA [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322714976|gb|EFZ06547.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323130207|gb|ADX17637.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326622908|gb|EGE29253.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326627425|gb|EGE33768.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332988816|gb|AEF07799.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 295
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|296161289|ref|ZP_06844097.1| flagellar motor component-like protein [Burkholderia sp. Ch1-1]
gi|295888447|gb|EFG68257.1| flagellar motor component-like protein [Burkholderia sp. Ch1-1]
Length = 289
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 159/289 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I ++G F +GG+ LIQPFE++ + GA +G FV++NP +K + +
Sbjct: 1 MFVAIGWVLVIGSVLGSFIGVGGHLPALIQPFELLCIFGAAIGAFVVSNPTSTLKKTIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P +S IF P VLE++
Sbjct: 61 IPSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEAEVGAPKDSVIFQKYPHVLEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAESAVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + + Y
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPLADLLTAKGRAEGKPYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A ++G P +A+E+GRKVL ++RPS + + V K A
Sbjct: 241 VKAVLLASLSGYAPAIAVEFGRKVLFTADRPSFQELDDAVRATKTPKSA 289
>gi|121596102|ref|YP_987998.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|120608182|gb|ABM43922.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
Length = 286
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 152/273 (55%), Gaps = 2/273 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M ++G IT C+ G F A GGN +L+ PFE++ + GA LG F++ N KV+K +
Sbjct: 1 MLVLLGYIITFGCVFGVFVAHGGNVQVLLTALPFEMITIGGAALGSFIVTNQPKVLKATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L ++F + Y +++ +LY ++ +K E ++ P S +F PTV
Sbjct: 61 ATLPQVFKGNKYTKARYMELMAMLYEILQKARKEGLMSIEQDVESPKESELFKKFPTVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ + F DY+RM++ GN ++EIE LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DPHVVEFTTDYLRMMVSGNLNAHEIEALMDSEIETHHAEAHAPVAALTRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y PL ++ + Y
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIASALVGTFLGILLAYGAVEPLAGLLEQKAADAAKEY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+K L+A M G P +IE+GRKVL +RP
Sbjct: 241 ECIKSTLLASMQGYNPATSIEFGRKVLFSGDRP 273
>gi|78063637|ref|YP_373545.1| flagellar motor component-like [Burkholderia sp. 383]
gi|77971522|gb|ABB12901.1| Flagellar motor component-like protein [Burkholderia sp. 383]
Length = 289
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 158/289 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ L+QPFE++ + GA LG FV++NP+ +K + +
Sbjct: 1 MFVAIGWIVVIGSVIGSFVGVGGHLPALLQPFELLCIFGAALGAFVVSNPVTTLKKTIKT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + Y +++ LLY L+ ++ E +D P S +F VLE++
Sbjct: 61 LPTCFKGGGYTKQQYVELIALLYELLQKARRDGMMALEADVDAPEQSPLFQKYSHVLEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEMQDLMDEELHTHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAVLGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRAAAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A M+G P VA+E+GRKVL ++RPS + + + V K A
Sbjct: 241 VKAVLLASMSGYAPPVAVEFGRKVLFTADRPSFKELDEAVRATKSPKAA 289
>gi|51596730|ref|YP_070921.1| flagellar motor protein MotA [Yersinia pseudotuberculosis IP 32953]
gi|153948045|ref|YP_001400613.1| flagellar motor protein MotA [Yersinia pseudotuberculosis IP 31758]
gi|170023988|ref|YP_001720493.1| flagellar motor protein MotA [Yersinia pseudotuberculosis YPIII]
gi|186895792|ref|YP_001872904.1| flagellar motor protein MotA [Yersinia pseudotuberculosis PB1/+]
gi|51590012|emb|CAH21645.1| chemotaxis MotA protein [Yersinia pseudotuberculosis IP 32953]
gi|152959540|gb|ABS47001.1| chemotaxis protein motA [Yersinia pseudotuberculosis IP 31758]
gi|169750522|gb|ACA68040.1| chemotaxis protein MotA [Yersinia pseudotuberculosis YPIII]
gi|186698818|gb|ACC89447.1| chemotaxis protein MotA [Yersinia pseudotuberculosis PB1/+]
Length = 295
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+AGAG+G F++ N K IK + +
Sbjct: 1 MLVILGYLVVLGAVFGGYMLVGGHLGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATMRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P ++ +
Sbjct: 61 MPKLMRRSKYNKALYMDLMALLYRLLAKSRQQGMLSLERDIENPLESEIFSNYPRIMADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQESEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|292488571|ref|YP_003531455.1| chemotaxis protein MotA [Erwinia amylovora CFBP1430]
gi|292899742|ref|YP_003539111.1| chemotaxis protein [Erwinia amylovora ATCC 49946]
gi|291199590|emb|CBJ46707.1| chemotaxis protein [Erwinia amylovora ATCC 49946]
gi|291554002|emb|CBA21047.1| Chemotaxis protein MotA (Motility protein A) [Erwinia amylovora
CFBP1430]
gi|312172717|emb|CBX80973.1| Chemotaxis protein MotA (Motility protein A) [Erwinia amylovora
ATCC BAA-2158]
Length = 294
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 158/273 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + ++GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + S
Sbjct: 1 MLIILGYIIVLGSVLGGYLMVGGHLGALYQPSEVLIIVGAGVGAFIVGNNGKAIKATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LLY LM ++ E ID+P S IF + P +L +
Sbjct: 61 LPLLMRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIDNPQESEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+++ GN ++EIE LMDEEI+ +E P A+ MG+SLPA GIV A
Sbjct: 121 RLVDFISDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPAIALGTMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII + + LG I ++ GT LGI+L+Y +PL+ ++ + ++
Sbjct: 181 VMGIIHTLAAADRPAAELGALIANAMVGTFLGILLAYGFISPLSGVLRQKCAENTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSF 273
>gi|317491634|ref|ZP_07950070.1| chemotaxis protein MotA [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921181|gb|EFV42504.1| chemotaxis protein MotA [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 297
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 168/282 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + ++GG+ +GG+ L QP E++I+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYAVVTIAVLGGYVIVGGHLGALYQPAELLIIAGAGIGAFIVGNNGKAIKATLRT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y DV+ L+Y+L+ ++ E I++P S +F++ P +L +
Sbjct: 61 LPKLGRSAKYNKALYMDVMGLMYLLLAKARQQGMLTLERDIENPQESELFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR+++ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 ILIEFITDYMRLMVSGNMNAFEIEALMDEEIETFESEAEGPADSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFVSPLASLMRQNCAETVKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L++ ++G PQ+A+E+GRK L +ERPS + + V Q
Sbjct: 241 IKTTLLSSLHGYAPQIAVEFGRKTLYSTERPSFMELEEHVRQ 282
>gi|94986925|ref|YP_594858.1| flagellar motor protein MotA [Lawsonia intracellularis PHE/MN1-00]
gi|94731174|emb|CAJ54536.1| Flagellar motor component [Lawsonia intracellularis PHE/MN1-00]
Length = 282
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 165/278 (59%), Gaps = 11/278 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLK-----VIK 55
M IIG FI I IIGG+ GN +L QP E+VI+ GA LG F A+ K VIK
Sbjct: 1 MYIIIGYFIVIASIIGGYLMAKGNLALLFQPAELVIIIGAALGAF-FASQTKYSFTLVIK 59
Query: 56 DSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT 115
+ L IFG + Y + L LLY L + + E+ I+ P +S IF+ PT
Sbjct: 60 N----LSHIFGDPNSTKIKYLETLALLYGLFLKMNREGVISIESDIEKPESSPIFSKYPT 115
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
++++ ++ FI D +R+ + A +I+NLM+ ++ I E+L P H+ISHM ESLP +
Sbjct: 116 IVKDTKVVAFIADTLRVYLTTGAPE-DIDNLMESDMKITHEEELLPAHSISHMAESLPGM 174
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GIV A+LG++ MG +++ P++LG IG +L GT +GI+ Y P+ S+++++ + H
Sbjct: 175 GIVAAVLGVVITMGKINEPPEVLGHYIGAALVGTFIGILFCYGFFGPMGSKLETSAEEAH 234
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
Y +K+A+ A + G+ P +A+EYGR+ +P + RPS
Sbjct: 235 FYYNSIKEAVAAAIRGSTPMIAVEYGRRAIPNTFRPSF 272
>gi|332756041|gb|EGJ86394.1| chemotaxis protein motA [Shigella flexneri 4343-70]
gi|333003362|gb|EGK22908.1| chemotaxis protein motA [Shigella flexneri K-218]
Length = 295
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G + A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGGVHALGSADRPAAELGVLIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|22125716|ref|NP_669139.1| flagellar motor protein MotA [Yersinia pestis KIM 10]
gi|45441603|ref|NP_993142.1| flagellar motor protein MotA [Yersinia pestis biovar Microtus str.
91001]
gi|108807852|ref|YP_651768.1| flagellar motor protein MotA [Yersinia pestis Antiqua]
gi|108812128|ref|YP_647895.1| flagellar motor protein MotA [Yersinia pestis Nepal516]
gi|149366376|ref|ZP_01888410.1| chemotaxis MotA protein [Yersinia pestis CA88-4125]
gi|162419808|ref|YP_001607211.1| flagellar motor protein MotA [Yersinia pestis Angola]
gi|165925431|ref|ZP_02221263.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938506|ref|ZP_02227063.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008589|ref|ZP_02229487.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210492|ref|ZP_02236527.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401769|ref|ZP_02307260.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422607|ref|ZP_02314360.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426341|ref|ZP_02318094.1| chemotaxis protein motA [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167466605|ref|ZP_02331309.1| chemotaxis protein motA [Yersinia pestis FV-1]
gi|218928796|ref|YP_002346671.1| flagellar motor protein MotA [Yersinia pestis CO92]
gi|229841655|ref|ZP_04461813.1| chemotaxis MotA protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843772|ref|ZP_04463915.1| chemotaxis MotA protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229894515|ref|ZP_04509697.1| chemotaxis MotA protein [Yersinia pestis Pestoides A]
gi|229902448|ref|ZP_04517567.1| chemotaxis MotA protein [Yersinia pestis Nepal516]
gi|270490372|ref|ZP_06207446.1| flagellar motor stator protein MotA [Yersinia pestis KIM D27]
gi|294504145|ref|YP_003568207.1| flagellar motor protein [Yersinia pestis Z176003]
gi|21958634|gb|AAM85390.1|AE013785_3 proton conductor component of motor [Yersinia pestis KIM 10]
gi|45436464|gb|AAS62019.1| chemotaxis MotA protein [Yersinia pestis biovar Microtus str.
91001]
gi|108775776|gb|ABG18295.1| chemotaxis MotA protein [Yersinia pestis Nepal516]
gi|108779765|gb|ABG13823.1| chemotaxis MotA protein [Yersinia pestis Antiqua]
gi|115347407|emb|CAL20309.1| chemotaxis MotA protein [Yersinia pestis CO92]
gi|149290750|gb|EDM40825.1| chemotaxis MotA protein [Yersinia pestis CA88-4125]
gi|162352623|gb|ABX86571.1| chemotaxis protein motA [Yersinia pestis Angola]
gi|165913621|gb|EDR32241.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922540|gb|EDR39691.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992971|gb|EDR45272.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207672|gb|EDR52152.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958454|gb|EDR55475.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048874|gb|EDR60282.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054696|gb|EDR64500.1| chemotaxis protein motA [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680494|gb|EEO76591.1| chemotaxis MotA protein [Yersinia pestis Nepal516]
gi|229689380|gb|EEO81443.1| chemotaxis MotA protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694118|gb|EEO84166.1| chemotaxis MotA protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229703534|gb|EEO90551.1| chemotaxis MotA protein [Yersinia pestis Pestoides A]
gi|262362262|gb|ACY58983.1| flagellar motor protein [Yersinia pestis D106004]
gi|262366195|gb|ACY62752.1| flagellar motor protein [Yersinia pestis D182038]
gi|270338876|gb|EFA49653.1| flagellar motor stator protein MotA [Yersinia pestis KIM D27]
gi|294354604|gb|ADE64945.1| flagellar motor protein [Yersinia pestis Z176003]
gi|320014809|gb|ADV98380.1| chemotaxis MotA protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 295
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+AGAG+G F++ N K IK + +
Sbjct: 1 MLVILGYLVVLGAVFGGYTLVGGHLGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATMRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P ++ +
Sbjct: 61 MPKLMRRSKYNKALYMDLMALLYRLLAKSRQQGMLSLERDIENPLESEIFSNYPRIMADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQESEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|83859896|ref|ZP_00953416.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
gi|83852255|gb|EAP90109.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
Length = 288
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 163/275 (59%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + GGF GG+ I++ PFE++++ GA +G F+++N L I +
Sbjct: 1 MFQIIGIVVLFGMVFGGFTLAGGHFDIIVAALPFELMMIGGAAIGAFLISNSLGTITKTA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ G+ Y D+L LL+ L +K E+HI++P++S+IF++ P +++
Sbjct: 61 GDFAKLISGPKWGKQDYMDLLTLLFQLTKTMKTKGVIALESHIENPHDSSIFSAYPKIMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++I+ +E P HA+ M ++LPA+GIV
Sbjct: 121 DHFAIDFICDTLRMMTMNLEDPHQVEDAMEKQIEKHHHEAATPAHALQSMADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG + P +LG IG +L GT LG+ L+Y L P +++ ++ Y
Sbjct: 181 AAVLGIIKTMGAIDSPPTVLGAKIGSALVGTFLGVFLAYGLVGPFAARLNEIYEEEGAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
I++ L+A+++G Q+++E GR +P S +PS
Sbjct: 241 KIIQAVLVAHLHGNAAQISVEIGRGNVPSSFQPSF 275
>gi|161502955|ref|YP_001570067.1| flagellar motor protein MotA [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160864302|gb|ABX20925.1| hypothetical protein SARI_01017 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 295
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKTMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|50120621|ref|YP_049788.1| flagellar motor protein MotA [Pectobacterium atrosepticum SCRI1043]
gi|49611147|emb|CAG74593.1| chemotaxis protein [Pectobacterium atrosepticum SCRI1043]
Length = 295
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 162/272 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAAIGAFIVGNNGKAIKATIRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LL+ +M ++ E ID+P S IF+S P +L +N
Sbjct: 61 LPLLIKSSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILSDN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 NIVEFITDYLRLMVSGNMNAFEIETLMDEEIETVEHESEVPASSLTMMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPS 272
>gi|322616923|gb|EFY13831.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618162|gb|EFY15054.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625832|gb|EFY22651.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626284|gb|EFY23094.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632698|gb|EFY29443.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322639042|gb|EFY35735.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640482|gb|EFY37135.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646009|gb|EFY42526.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322655477|gb|EFY51785.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660256|gb|EFY56494.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662936|gb|EFY59143.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668122|gb|EFY64281.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674118|gb|EFY70212.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675528|gb|EFY71602.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683058|gb|EFY79074.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686752|gb|EFY82730.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195357|gb|EFZ80537.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199249|gb|EFZ84344.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323204162|gb|EFZ89174.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207504|gb|EFZ92452.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211879|gb|EFZ96708.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217489|gb|EGA02208.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221976|gb|EGA06365.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323224727|gb|EGA08996.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231511|gb|EGA15624.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235953|gb|EGA20032.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240523|gb|EGA24566.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245415|gb|EGA29415.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323250186|gb|EGA34078.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253634|gb|EGA37462.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259385|gb|EGA43022.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323266190|gb|EGA49680.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270700|gb|EGA54141.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 295
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 158/273 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN +EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNPFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|60115452|dbj|BAD90018.1| MotA [Pectobacterium carotovorum subsp. carotovorum]
Length = 295
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 162/272 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAAVGAFIVGNNGKAIKATLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LL+ +M ++ E ID+P S IF+S P +L +N
Sbjct: 61 LPLLVKSSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A
Sbjct: 121 TVVEFITDYLRLMVSGNMNAFEIETLMDEEIETIEHESEVPASSLTMMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPS 272
>gi|116694192|ref|YP_728403.1| flagellar motor component [Ralstonia eutropha H16]
gi|113528691|emb|CAJ95038.1| flagellar motor component [Ralstonia eutropha H16]
Length = 268
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 150/252 (59%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ L QP E VI+ GA G F+ N K IK + +L +F ++ Y DV+ L
Sbjct: 3 GGHMGALYQPAEFVIIGGAAFGAFIATNTAKAIKATIKALPGLFKSSKYKKELYLDVMSL 62
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
LY+L+ ++ E I DP S++F+ P +L + + F+ DY+RM++ GN ++
Sbjct: 63 LYVLLSKARREGILFLEKEIADPAASSVFSQYPRILSDPVVMEFLTDYLRMMVNGNMNAF 122
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EIE LMD EI+ +E P HA+S +G++LPA GIV A++G++ A+G+ P LG
Sbjct: 123 EIEALMDHEIETFRHEAEIPAHALSRVGDALPAFGIVAAVMGVVHALGSADLPPAELGAL 182
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
I ++ GT LGI+L+Y +PL ++I+ + ++Y +K L+A +NG P VA+E+G
Sbjct: 183 IAHAMVGTFLGILLAYGFVSPLAARIELQVSENVKVYECIKVVLLASLNGYAPLVAVEFG 242
Query: 262 RKVLPLSERPSI 273
RKVL + RPS
Sbjct: 243 RKVLYSTVRPSF 254
>gi|145599065|ref|YP_001163141.1| flagellar motor protein MotA [Yersinia pestis Pestoides F]
gi|145210761|gb|ABP40168.1| chemotaxis MotA protein [Yersinia pestis Pestoides F]
Length = 295
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+AGAG+G F++ N K IK + +
Sbjct: 1 MLVILGYLVVLGAVFGGYTLVGGHLGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATMRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P ++ +
Sbjct: 61 MPKLIRRSKYNKALYMDLMALLYRLLAKSRQQGMLSLERDIENPLESEIFSNYPRIMADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQESEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|317047825|ref|YP_004115473.1| flagellar motor protein MotA [Pantoea sp. At-9b]
gi|316949442|gb|ADU68917.1| flagellar motor protein MotA [Pantoea sp. At-9b]
Length = 295
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 166/288 (57%), Gaps = 4/288 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + ++GG+ +GG+ L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLIILGYIVVLGSVLGGYLLVGGHLGALYQPSELLIIGGAAVGAFLVGNNGKAIKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y D++ LLY LM ++ E I+DP S IF + P +L +
Sbjct: 61 FPLLMRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIEDPSQSEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R+++ GN ++EIE LMDEEI+ +E P ++S +G+ LPA GIV A
Sbjct: 121 QLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPAQSLSAVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG + ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALVAHAMVGTFLGILLAYGFISPLASVLRQKCAESTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+K L++ +NG PQ+A+E+GRK L +ERPS QE+ ++ N K
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSF----QELEEHVRNAK 284
>gi|259908188|ref|YP_002648544.1| flagellar motor protein MotA [Erwinia pyrifoliae Ep1/96]
gi|224963810|emb|CAX55312.1| Chemotaxis protein [Erwinia pyrifoliae Ep1/96]
gi|283478117|emb|CAY74033.1| Chemotaxis protein MotA (Motility protein A) [Erwinia pyrifoliae
DSM 12163]
gi|310767898|gb|ADP12848.1| flagellar motor protein MotA [Erwinia sp. Ejp617]
Length = 294
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 158/273 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + ++GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + S
Sbjct: 1 MLIILGYIIVLGSVLGGYAMVGGHLGALYQPSEVLIIVGAGVGAFIVGNNGKAIKATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LLY LM ++ E ID+P S IF + P +L +
Sbjct: 61 LPLLMRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIDNPQESEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+++ GN ++EIE LMDEEI+ +E P A+ MG+SLPA GIV A
Sbjct: 121 RLVDFINDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPAIALGTMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII + + LG I ++ GT LGI+L+Y +PL+ ++ + ++
Sbjct: 181 VMGIIHTLAAADRPAAELGALIANAMVGTFLGILLAYGFISPLSGVLRQKCAENTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSF 273
>gi|253996631|ref|YP_003048695.1| flagellar motor protein MotA [Methylotenera mobilis JLW8]
gi|253983310|gb|ACT48168.1| flagellar motor protein MotA [Methylotenera mobilis JLW8]
Length = 286
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 160/282 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + I GG+ GG+ L QP E++++ G +G F++ N K K + +
Sbjct: 1 MFVIIGYVVVCGTIFGGYALAGGHLGGLWQPLEVLMIFGGAVGAFIVGNDSKAQKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LL+ ++ ++K EN +++P S +F+ P + ++
Sbjct: 61 LPTLFKGSKFNKALYMDLLALLFEILTKIRKDGMMSIENDVENPEASPLFSKYPALQHDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+++ GN ++++ENLMD EI+ E P H ++ +G+ LPA GIV A
Sbjct: 121 HLIEFITDYLRLMVSGNMDAFQVENLMDNEIETHHMEGHVPAHCVAKLGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M N++ P LG I +L GT LGI+L+Y PL+ ++ + ++Y
Sbjct: 181 VMGVVHTMENVALPPAELGILIAHALVGTFLGILLAYGFIGPLSGLLEQKLEESTKMYQT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK L+A +NG P +A+E+GRKVL +ERP+ + V Q
Sbjct: 241 VKVTLLASLNGYAPAIAVEFGRKVLYSTERPTFAELESHVKQ 282
>gi|188533602|ref|YP_001907399.1| flagellar motor protein MotA [Erwinia tasmaniensis Et1/99]
gi|188028644|emb|CAO96506.1| Chemotaxis protein [Erwinia tasmaniensis Et1/99]
Length = 294
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 164/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + ++GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + S
Sbjct: 1 MLIILGYIIVLGSVLGGYAMVGGHLGALYQPSEVLIIVGAGVGAFIVGNNGKAIKATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LLY LM ++ E ID+P S IF + P ++ +
Sbjct: 61 LPLLMRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIDNPQESEIFANYPRIIADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R+++ GN ++EIE LMDEEI+ +E P A+ MG+SLPA GIV A
Sbjct: 121 KLVDFISDYLRLMVSGNMNAFEIEALMDEEIETYEHECDVPATALGTMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII + + LG I ++ GT LGI+L+Y +PL ++ + ++
Sbjct: 181 VMGIIHTLAAADRPAAELGALIANAMVGTFLGILLAYGFISPLAGVLRQKCAENIKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V ++ S
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFSELEEHVRNAKSPQQTS 290
>gi|148260893|ref|YP_001235020.1| flagellar motor protein MotA [Acidiphilium cryptum JF-5]
gi|146402574|gb|ABQ31101.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
Length = 286
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 158/277 (57%), Gaps = 2/277 (0%)
Query: 6 GLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
G+ ++C+ G F GG P + PFE++ + GA +G FV N + IK + +
Sbjct: 3 GVAFLLVCVFGVFIVTGGAIGPLLKSMPFELITIGGAAVGTFVAGNSMHDIKHTLAGFKK 62
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ A + Y D+L LL+ L+ E HI+ P S +F P +L+N E T
Sbjct: 63 VLRGGAFKKADYTDLLCLLFYLVRLAATRGAMALEPHIERPEESPVFKHFPAILKNEEAT 122
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
ICDY+RM+ + ++IE++M E+ L E+L H + M + LPA+GIV A+LG
Sbjct: 123 AIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELHGAHTLQTMADGLPALGIVAAVLG 182
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IK M ++SQ P +LG IG +LTGT LG++L+Y + PL+ +++ + R + +++
Sbjct: 183 VIKTMAHISQPPAVLGEMIGEALTGTFLGVLLAYGVVGPLSVRLRGVVEEDSRYFEVIRA 242
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
L+A+++G PQV++E GRK++P P+ + + + V
Sbjct: 243 VLVAHLHGNAPQVSVEVGRKMVPNLFMPTFQELEESV 279
>gi|332284001|ref|YP_004415912.1| flagellar motor protein MotA [Pusillimonas sp. T7-7]
gi|330427954|gb|AEC19288.1| flagellar motor protein MotA [Pusillimonas sp. T7-7]
Length = 290
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 166/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + + G F +GG+ L QPFE V++AGA +G ++ ++ K +K S
Sbjct: 1 MFIILGFLIVFISVFGSFVMLGGHLGALYQPFEFVLIAGAAIGAYIASSSSKSVKLLFSS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F G++ Y +++ LLY+L+ ++ E+ I++P +S IF P +L +
Sbjct: 61 LPIAFRKSPYGKELYMELMALLYVLLNKARRDGLMSIESDIEEPESSPIFADYPRILRDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR++I GN S+EIE LMD+EI+ E+ P +A+ + ++LPA GIV A
Sbjct: 121 NLMEFITDYMRLMISGNMSSFEIETLMDQEIEAHFQERSVPSNALRAVADALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ ++ Q P IL I ++ GT LG++L+Y P S I+ + ++
Sbjct: 181 VLGVIKALASVDQPPAILADLISKAMVGTFLGVLLAYGFVAPFASSIERRSVASMKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L+A MNG PQ+A+E+GRKVL RPS + V Q K +
Sbjct: 241 IKVTLLASMNGYPPQLAVEFGRKVLYSYARPSFMELEDHVRQTRSTAKKA 290
>gi|83648053|ref|YP_436488.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83636096|gb|ABC32063.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 283
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 159/287 (55%), Gaps = 4/287 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ + + ++GG+ G L QPFE++I+ GA G F+++NP KVIK +
Sbjct: 1 MLLILGVIVVLASVLGGYVLSHGELAALWQPFELIIICGAAFGAFLISNPFKVIKQILHT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D+L L+Y L ++ E +DDP NS IF P ++ +
Sbjct: 61 IPKMIMGSPFNRVVYMDLLSLMYDLFDKARRSGVMAIEADVDDPLNSEIFNRYPAIVRMD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++ GN +E+E LMD E++ + E KP A++ + ++LP GIV A
Sbjct: 121 KLRDFITDYLRIVSTGNMAPHELEGLMDMELETRMQELEKPADAVNRVADALPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M +L P LG + +L GT LGI+ +Y P + + + ++ + Y
Sbjct: 181 VLGIVITMKSLGGPPDELGVHVAAALVGTFLGILAAYGFVGPASHAMHNLAAQEIKAYEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
VK +++A M G PQ+AIE+GRK L RPS QE+ Y +K
Sbjct: 241 VKVSILATMTGLAPQLAIEFGRKALNSDVRPSF----QELNDYVRSK 283
>gi|323174593|gb|EFZ60214.1| chemotaxis protein motA [Escherichia coli LT-68]
Length = 295
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETNESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G + A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGGVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|297517350|ref|ZP_06935736.1| flagellar motor protein MotA [Escherichia coli OP50]
Length = 284
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 156/261 (59%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+ GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +L +F +
Sbjct: 2 TVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKALPLLFRRSKYTK 61
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
Y D+L LLY LM ++ E I++P S IF S P +L ++ + FI DY+R+
Sbjct: 62 AMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADSVMLDFIVDYLRL 121
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+G+
Sbjct: 122 IISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAAVMGVVHALGSAD 181
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ LG I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +NG
Sbjct: 182 RPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQCVKVTLLSNLNGY 241
Query: 253 IPQVAIEYGRKVLPLSERPSI 273
P +A+E+GRK L SERPS
Sbjct: 242 APPIAVEFGRKTLYSSERPSF 262
>gi|271500048|ref|YP_003333073.1| flagellar motor protein MotA [Dickeya dadantii Ech586]
gi|270343603|gb|ACZ76368.1| flagellar motor protein MotA [Dickeya dadantii Ech586]
Length = 295
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 170/289 (58%), Gaps = 4/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TI I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYLVTIGSILGGYLIVGGELGALYQPSELLIIGGAAVGAFIVGNNAKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ +L+ LM ++ E ID+P S IF++ P +L +N
Sbjct: 61 LPVLFQGSKYTKAVYMDLMAVLFRLMAKSRQQGMLSLEFDIDNPKESEIFSNYPRILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 YIVEFVTDYLRLMVSGNMNAFEIETLMDEEIETVEHEVEVPATSLNLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHSLAFVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLASLLRQKNSEKLKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+K L++ +NG PQ+A+E+GRK L + RPS E+ ++ N KA
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTVRPSF----TEMEEHIRNVKA 285
>gi|253688989|ref|YP_003018179.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755567|gb|ACT13643.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 295
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 162/272 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAAVGAFIVGNNGKAIKATLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LL+ +M ++ E ID+P S IF+S P +L +N
Sbjct: 61 LPLLVKSSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A
Sbjct: 121 TVVEFITDYLRLMVSGNMNAFEIETLMDEEIETIEHESEVPATSLTLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPS 272
>gi|94312619|ref|YP_585828.1| chemotaxis protein MotA [Cupriavidus metallidurans CH34]
gi|93356471|gb|ABF10559.1| chemotaxis MotA protein, proton conductor component of flagella
motor [Cupriavidus metallidurans CH34]
Length = 299
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 153/252 (60%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ L QP E++I+ GA +G F+ +N K IK + ++ + ++ Y DV+ L
Sbjct: 34 GGHMGALYQPAELIIIGGAAVGAFISSNSGKAIKATMKAMPSLLKGSKYKKELYLDVMAL 93
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
LY+L+ ++ E I DP +S++F+ P +L + ++ F+ DY+RM++ GN ++
Sbjct: 94 LYVLLSKARREGILFLEKEIADPASSSVFSQYPRILADAKMMEFLTDYLRMMVNGNMNAF 153
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EIE LMD EI+ + +E P HA+S +G+ LPA GIV A++G++ A+ + P LG
Sbjct: 154 EIEALMDHEIETVRHEAEIPAHALSRVGDGLPAFGIVAAVMGVVHALASADLPPAELGAL 213
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
I ++ GT LGI+L+Y +PL S+++ + ++Y +K L+A +NG P VA+E+G
Sbjct: 214 IANAMVGTFLGILLAYGFVSPLASRVEHQVSESIKMYECIKVTLLASLNGYAPLVAVEFG 273
Query: 262 RKVLPLSERPSI 273
RKVL + RPS
Sbjct: 274 RKVLYSTVRPSF 285
>gi|296101765|ref|YP_003611911.1| flagellar motor protein MotA [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056224|gb|ADF60962.1| flagellar motor protein MotA [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 295
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELIIIGGAGVGAFIVGNNGKSIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 MMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|284007194|emb|CBA72483.1| flagellar motor protein MotA [Arsenophonus nasoniae]
Length = 289
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 157/263 (59%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ I ++GG+ +GG+ L QP E +I+ GAGLGGF++AN K IK + L +
Sbjct: 1 MVIGAVLGGYLLVGGHLSALYQPAEFLIIFGAGLGGFIVANNGKAIKSTLRVLPRLLTSS 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ Y D++ L + L+ ++ E I+DP S IF+ P +L + L +F+ D
Sbjct: 61 RYNKSIYMDLMALQFRLLTKSRQAGVLSLERDIEDPEQSDIFSQYPKLLSDPHLMSFLTD 120
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
YMR++I GN ++EIE LMDEEI +E P ++S +G+SLPA GIV A++G++ A+
Sbjct: 121 YMRLMITGNMNAHEIEALMDEEIATFEHEAEVPAVSLSMLGDSLPAFGIVAAVMGVVHAL 180
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ + +G IG ++ GT LGI+L+Y +PL + ++ +Q ++ +K L++
Sbjct: 181 ASADRPAGEMGILIGNAMVGTFLGILLAYGFISPLANLVRQKSHQQIKMMECIKVTLLSS 240
Query: 249 MNGAIPQVAIEYGRKVLPLSERP 271
++G PQ+A+E+GRK L L +RP
Sbjct: 241 ISGYAPQIAVEFGRKTLFLDDRP 263
>gi|238796915|ref|ZP_04640419.1| hypothetical protein ymoll0001_33250 [Yersinia mollaretii ATCC
43969]
gi|238719175|gb|EEQ10987.1| hypothetical protein ymoll0001_33250 [Yersinia mollaretii ATCC
43969]
Length = 297
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I IL + GGF GG L QP E++I+ GAG+G F++ N K I + +
Sbjct: 1 MLVIIGYLIVILTVFGGFSLSGGVLGALYQPTELLIIGGAGIGAFIVGNNGKSINATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ ++Y+L+ ++ E I+DP NS IF++ P +L ++
Sbjct: 61 LPHLFRGSHYTKVLYMDLMAMMYLLLNKGRQNGLMALEQDIEDPKNSAIFSAYPRLLADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY+R+++ G+ ++EIE LMDEEI+ +E P +++ +G+ LPA GIV A
Sbjct: 121 ALMNFVIDYLRLMVSGSMNAFEIEALMDEEIETCEHEHEVPAQSLNEIGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + LG I ++ GT LGI+L+Y PL S ++ +Q ++
Sbjct: 181 VMGVVNALAAADRPAAELGELIAHAMVGTFLGILLAYGFVLPLASLLRQKSSEQIKILQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
++ L++ MNG PQ+A+E+GRK+L +ERP+ + + V + + +S
Sbjct: 241 IRVTLLSSMNGYAPQIAVEFGRKILFSTERPTFIELEEHVREVKSSANSS 290
>gi|82702436|ref|YP_412002.1| chemotaxis (motility protein A) transmembrane [Nitrosospira
multiformis ATCC 25196]
gi|82410501|gb|ABB74610.1| probable chemotaxis (motility protein A) transmembrane
[Nitrosospira multiformis ATCC 25196]
Length = 286
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 153/273 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I + + GGF GG+ L QP E++++ GA +G F + N K +K + S
Sbjct: 1 MLVIIGSLIVLGSVFGGFALTGGHLAALFQPVELLMIGGAAMGAFTLGNTKKALKATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ LLY L+ ++K E +DDP S IF + P +L
Sbjct: 61 LPKVVQPPRYTKALYMDLMALLYDLLVKVRKEGLMSIEPDVDDPNESAIFANYPDILAEP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ DY+R+++ GN ++E+ENLMD EI+ E P H IS + +S+PA GIV A
Sbjct: 121 VALEFLTDYLRLMVAGNLNAFELENLMDNEIETHHQEGEIPVHCISRLADSMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M ++ P LG + +L GT LGI+L Y P+ S ++ + ++
Sbjct: 181 VMGVIHTMASVGLPPSELGVLVAQALVGTFLGILLGYGFVGPVASILEQRLNESTKILQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ L+A +NG P +A+E+GRKVL +ERPS
Sbjct: 241 IRVTLLASINGYTPALAVEFGRKVLYSTERPSF 273
>gi|221069303|ref|ZP_03545408.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|264676589|ref|YP_003276495.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|220714326|gb|EED69694.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|262207101|gb|ACY31199.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
Length = 286
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 157/273 (57%), Gaps = 2/273 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG + CI G + GG+ +L++ PFE+V + G LG F+++N KV+K +
Sbjct: 1 MLVLIGYIVAFGCIFGMYVLHGGSVGVLVKALPFEMVTIGGGALGAFIVSNQPKVLKATA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + Y +V+ LLY L+ +K E+ ++DP +ST+F + P ++
Sbjct: 61 KAIPSALKPSRYNKARYMEVMALLYELLQKARKEGLMSIESDVEDPQSSTVFQNYPQLMA 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN S+EIE LMD EI+ E P A++ + +LPA GI+
Sbjct: 121 DHHVVEFLTDYLRMMVSGNLNSHEIEALMDSEIEAHHAEAHAPVMALNRLAGALPAFGII 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ M + Q P +LG I +L GT LGI+L+Y+L P+ + ++ + +
Sbjct: 181 AAVLGVVNTMAFVGQPPAVLGGMIASALVGTFLGILLAYALVEPMAALLEQRAQDAAKEF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+K L+A M G P AIE+GRKVL +ERP
Sbjct: 241 ECIKATLLASMQGYNPGTAIEFGRKVLFSTERP 273
>gi|226941126|ref|YP_002796200.1| flagellar motor protein MotA [Laribacter hongkongensis HLHK9]
gi|226716053|gb|ACO75191.1| MotA1 [Laribacter hongkongensis HLHK9]
Length = 286
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 158/273 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + +IGGF GG+ L+QP E+VI+ GAG G F+ AN ++ + +
Sbjct: 1 MFVIIGYILVLGSVIGGFMMAGGHVAALLQPNELVIIFGAGTGAFLAANGGAPLRATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++F + Y ++ LL+ ++ ++K E +D P S IF+ P ++ ++
Sbjct: 61 LPQLFKGDKYNKALYMELFALLFEVLTKVRKEGLMSIEADVDAPQESPIFSKYPVIVNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FICDY+R+++ GN +EIENLMD EI+ +E P A++ M + LPA GIV A
Sbjct: 121 HVIDFICDYLRLMVGGNLNPFEIENLMDIEIETHHHEGSVPVGALAKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+LSY PL+++++ R+
Sbjct: 181 VMGVVHTMESVGIPPAELGKLIAAALVGTFLGILLSYGFIAPLSNRLEYKVNDVTRVLTT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A +NG PQVA+E+GRK L ++RP
Sbjct: 241 IKVTLLASLNGYAPQVAVEFGRKALYGADRPGF 273
>gi|170692675|ref|ZP_02883837.1| flagellar motor component-like protein [Burkholderia graminis
C4D1M]
gi|170142331|gb|EDT10497.1| flagellar motor component-like protein [Burkholderia graminis
C4D1M]
Length = 294
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ LIQPFE++ + GA +G FV++NP +K + +
Sbjct: 1 MFVAIGWLLVIGSVIGSFIGVGGHLPALIQPFELLCIFGAAIGAFVVSNPTSTLKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P S IF P VL ++
Sbjct: 61 IPSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEADVFAPEESVIFQKYPHVLSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPLADLLNAKGRAEAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L+A ++G P +A+E+GRKVL +++RPS + + V K A+
Sbjct: 241 VKAVLLASLSGYAPPIAVEFGRKVLFIADRPSFQELDDAVRATKTPKPAA 290
>gi|299531266|ref|ZP_07044676.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|298720673|gb|EFI61620.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 286
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 157/273 (57%), Gaps = 2/273 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG + CI G + GG+ +L++ PFE+V + G LG F+++N KV+K +
Sbjct: 1 MLVLIGYIVAFGCIFGMYVLHGGSVGVLVKALPFEMVTIGGGALGAFIVSNQPKVLKATA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + Y +V+ LLY L+ +K E+ ++DP +ST+F + P ++
Sbjct: 61 KAIPSALRPSRYNKARYMEVMALLYELLQKARKEGLMSIESDVEDPQSSTVFQNYPQLMA 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN S+EIE LMD EI+ E P A++ + +LPA GI+
Sbjct: 121 DHHVVEFLTDYLRMMVSGNLNSHEIEALMDSEIEAHHAEAHAPVMALNRLAGALPAFGII 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ M + Q P +LG I +L GT LGI+L+Y+L P+ + ++ + +
Sbjct: 181 AAVLGVVNTMAFVGQPPAVLGGMIASALVGTFLGILLAYALVEPMAALLEQRAQDAAKEF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+K L+A M G P AIE+GRKVL +ERP
Sbjct: 241 ECIKATLLASMQGYNPGTAIEFGRKVLFSTERP 273
>gi|94970508|ref|YP_592556.1| chemotaxis protein [Candidatus Koribacter versatilis Ellin345]
gi|94552558|gb|ABF42482.1| chemotaxis protein [Candidatus Koribacter versatilis Ellin345]
Length = 301
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 158/278 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + C+IGGF G +L+QP E++I+ GA G ++ANP++++K
Sbjct: 1 MFAIIGIVVVFGCVIGGFLMEKGQIMVLLQPAELLIIGGAAAGTILVANPMRIVKKIVSG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LL + Q Y D LK++Y L+ ++ E+ I++P S IFT + ++
Sbjct: 61 LLGVLKGSKYNQTAYVDSLKMMYELLNKARRQGLVALESDIEEPDKSPIFTKYKSFTSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+CD MRM + G ++++ ++D ++++ E +P +++ + +SLP +GIV A
Sbjct: 121 HVRDFVCDTMRMSVTGGVDPFDVDQMIDTDMEVHHAEITEPVASLTTVADSLPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG L P+ +G + +L GT LGI+L Y + PL S + T ++H Y +
Sbjct: 181 VLGVVITMGALGGPPEEIGHKVAAALVGTFLGILLCYGMVGPLASNMAKTADEEHAYYGV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
++ +IA+M G P +AIE GR+ +P RPS V +
Sbjct: 241 LRVVMIAFMKGISPLLAIEMGRRAIPGYVRPSFADVEK 278
>gi|251789150|ref|YP_003003871.1| flagellar motor protein MotA [Dickeya zeae Ech1591]
gi|247537771|gb|ACT06392.1| flagellar motor protein MotA [Dickeya zeae Ech1591]
Length = 295
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 170/289 (58%), Gaps = 4/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TI I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYLVTIGSILGGYLIVGGELGALYQPSELLIIGGAAVGAFIVGNNAKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ +L+ LM ++ E ID+P S IF++ P +L ++
Sbjct: 61 LPVLFQGSKYTKAVYMDLMAVLFRLMAKSRQQGMLSLEFDIDNPKESEIFSNYPRILSDD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 YIVEFVTDYLRLMVSGNMNAFEIETLMDEEIETVEHEVEVPATSLNLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHSLAFVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLASLLRQKNSEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+K L++ +NG PQ+A+E+GRK L + RPS E+ ++ N KA
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTVRPSF----TEMEEHIRNVKA 285
>gi|323529506|ref|YP_004231658.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323386508|gb|ADX58598.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 294
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 159/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ L+QPFE++ + GA +G FV++NP+ +K + +
Sbjct: 1 MFVAIGWVLVIGSVIGSFVGVGGHLPALVQPFELLCIFGAAIGAFVVSNPISTLKKTLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P S IF P VL ++
Sbjct: 61 IPSCFKNGGYTKEKYLELIALLYELLQKARKEGMMSLEADVFAPEESVIFQKYPHVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPLADLLNAKGRAEAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L+A ++G P +A+E+GRKVL ++RPS + + V K A+
Sbjct: 241 VKAVLLASLSGYAPPIAVEFGRKVLFTADRPSFQELDDAVRATKTPKPAA 290
>gi|297538878|ref|YP_003674647.1| flagellar motor protein MotA [Methylotenera sp. 301]
gi|297258225|gb|ADI30070.1| flagellar motor protein MotA [Methylotenera sp. 301]
Length = 286
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 151/253 (59%)
Query: 30 QPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNL 89
QP E++++ G LG FV+ N +K +K +G SL +F + Y D+L +L+ ++ +
Sbjct: 30 QPLELLMIFGGALGAFVVGNDIKALKATGKSLPTLFKGSKYNKALYMDLLAMLFEILAKI 89
Query: 90 KKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDE 149
+K EN +++P S +F+ P +L ++ L FI DY+R++ GN +++IE LM+
Sbjct: 90 RKDGMMSIENDVENPEASPLFSKYPKLLHDHHLIEFITDYLRLMGSGNMDAFQIETLMES 149
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
EI+ E P H I+ +G++LPA GIV A++G++ MG+L + P LG IG +L GT
Sbjct: 150 EIETHHMEGHVPAHCIAKLGDALPAFGIVAAVMGVVHTMGSLDKPPPELGEMIGHALVGT 209
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
LGI+L+Y PL+ ++ + ++Y VK LI+ +NG P +A+E+GRK+L +E
Sbjct: 210 FLGILLAYGFVGPLSGLLEQKLEESTKMYNAVKVTLISSLNGYAPAIAVEFGRKILYSTE 269
Query: 270 RPSIEIVAQEVLQ 282
RP + + Q
Sbjct: 270 RPGFAELEAHIKQ 282
>gi|149184215|ref|ZP_01862533.1| flagellar motor protein MotA [Erythrobacter sp. SD-21]
gi|148831535|gb|EDL49968.1| flagellar motor protein MotA [Erythrobacter sp. SD-21]
Length = 287
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 160/277 (57%), Gaps = 4/277 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG+F+ ++ + GGF GG+ P ++ PFE++I+ GA +G V N L +K G
Sbjct: 1 MYAVIGIFVLLVMVFGGFVLSGGSLGPVLVAMPFEMLIIGGAAIGALVAGNSLDGLKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ +IF + + D + L LM LK E+H+DDP NST+F+ P +L+
Sbjct: 61 GAMGKIFKGPQHTKQDHIDAIALTTQLMRMLKNEGPVALESHLDDPANSTVFSEYPNLLK 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
N L ICD + +I+V G ++ +E +MD + +E +P H + + ++LPA+G
Sbjct: 121 NKPLVALICDTLTLIVVSSGTLETHAVEEVMDNAMKTHFHEMHEPQHNLQTLSDALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P+ILG IG +L GT LG++L+Y + PL ++K + +
Sbjct: 181 IVAAVLGVVKTMGSIDQPPEILGKMIGAALVGTFLGVLLAYGIVGPLAGRLKQVLEQDEQ 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ VK+ +IA ++G + +E R L + RP +
Sbjct: 241 IFHAVKQVIIASLHGHPQPLVVESARSGLGHNVRPGL 277
>gi|307726279|ref|YP_003909492.1| flagellar motor component-like protein [Burkholderia sp. CCGE1003]
gi|307586804|gb|ADN60201.1| flagellar motor component-like protein [Burkholderia sp. CCGE1003]
Length = 294
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 158/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ LIQPFE++ + GA +G FV++NP +K + +
Sbjct: 1 MFVAIGWVLVIGSVIGSFVGVGGHLPALIQPFELLCIFGAAIGAFVVSNPTSTLKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P S IF P VL ++
Sbjct: 61 IPSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEADVFAPEESVIFQKYPHVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPLADLLNAKGRAEAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L+A ++G P +A+E+GRKVL ++RPS + + V K A+
Sbjct: 241 VKAVLLASLSGYAPPIAVEFGRKVLFTADRPSFQELDDAVRATKSPKPAA 290
>gi|253990167|ref|YP_003041523.1| flagellar motor protein MotA [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781617|emb|CAQ84780.1| chemotaxis mota protein [Photorhabdus asymbiotica]
Length = 295
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 161/280 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + +IGG+ +GG+ L QP E +I+ GAG+G F++ N K IK +
Sbjct: 1 MLVLLGYIVVFGAVIGGYLIVGGHLGALYQPAEFLIITGAGIGAFIVGNNGKAIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ LL+ L+ ++ E I+ P S IFT P +L++
Sbjct: 61 LPKVMRRSKYNKVMYMDLMALLFRLLAKSRQHGVLALERDIEHPQQSDIFTQYPRLLKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR+I+ GN +EIE LMDEEI+ E P ++ +G+SLPA GIV A
Sbjct: 121 HLMDFITDYMRLIVSGNMNPHEIEALMDEEIETYEQESEIPATSLMMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVNALGSADRPAGELGALIAHAMVGTFLGILLAYGFISPLATLLRQRSGEHIKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K L++ +NG PQ+A+E+GRK L L++RPS + + V
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYLTDRPSFTELEEHV 280
>gi|330821028|ref|YP_004349890.1| Flagellar motor component-like protein [Burkholderia gladioli BSR3]
gi|327373023|gb|AEA64378.1| Flagellar motor component-like protein [Burkholderia gladioli BSR3]
Length = 288
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 158/287 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + +IG F +GG+ L+QPFE++ + GA G FV++NP + + S
Sbjct: 1 MFVAIGWIVVLASVIGSFVGVGGHLPALLQPFELLCIFGAAAGAFVVSNPRDTLGKTLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + Y +++ LLY L+ ++ E+ I++P NS +F P VL ++
Sbjct: 61 LPSCFKSTSYTKTQYLELIALLYELLQKARRDGMLSLESDIENPANSPLFQKYPHVLGDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE++ E AI M + LPA GIV A
Sbjct: 121 HLLDFIIDYLRMMSTGNLNPLEMQDLMDEELETHHAEVSVAPSAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAELGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRNSAKPFHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
VK L+A ++G P VA+E+GRKVL ++RPS + + + V +K
Sbjct: 241 VKAVLLASLSGYAPAVAVEFGRKVLFTADRPSFQELDEAVRATKTSK 287
>gi|82776485|ref|YP_402834.1| flagellar motor protein MotA [Shigella dysenteriae Sd197]
gi|309789306|ref|ZP_07683897.1| chemotaxis protein motA [Shigella dysenteriae 1617]
gi|81240633|gb|ABB61343.1| proton conductor component of motor [Shigella dysenteriae Sd197]
gi|308922841|gb|EFP68357.1| chemotaxis protein motA [Shigella dysenteriae 1617]
Length = 295
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P ++ ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRIIADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIEPHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SER S
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERLSF 273
>gi|209963561|ref|YP_002296476.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
gi|7025362|gb|AAF35850.1|AF220005_1 lateral flagellar motor protein MotA [Rhodospirillum centenum]
gi|209957027|gb|ACI97663.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
Length = 294
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 165/280 (58%), Gaps = 4/280 (1%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GGF A+GGN +L QPFE++I+ G +G FV+ANP +V +D+ ++L E+F Q
Sbjct: 15 LGGFAALGGNLGVLWQPFEVLIICGGAVGAFVIANPSQVRRDTVLALRELFRGTRRKQGD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D+L LY ++ + E I+ P +S IF P+VL + F+ DY+R++
Sbjct: 75 YLDLLGALYTVLRMARTKGLLSLEKDIERPEDSQIFQQFPSVLGHERAMRFLTDYLRLMS 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+G RS+E+E LM+EE+ + E + HA+ + E LPA+GIV A+LG+IKAMG+++
Sbjct: 135 LGADRSHEMEALMEEELSTLQKELQRVSHALHVVAEGLPALGIVAAVLGMIKAMGSIAAP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
P++LG IG +L GT +G++LSY PL R ++ + + +K L AY++G+ P
Sbjct: 195 PEVLGHMIGGALVGTFMGVLLSYGFIGPLAGAAHRMRDEELKYFQCMKAGLTAYLHGSAP 254
Query: 255 QVAIEYGRKVLPLSERPSI----EIVAQEVLQYNHNKKAS 290
+ +E+ RKVL +PS E+ + +KA+
Sbjct: 255 AICVEHARKVLYSEVQPSFYDVEEVTTAAAARLTERQKAA 294
>gi|238795042|ref|ZP_04638636.1| hypothetical protein yinte0001_4560 [Yersinia intermedia ATCC
29909]
gi|238725643|gb|EEQ17203.1| hypothetical protein yinte0001_4560 [Yersinia intermedia ATCC
29909]
Length = 295
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GGN L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYMIVGGNLGALYQPAEFLIIGGAGVGAFIVGNNGKAIKATIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I+ P S IF++ P +L +
Sbjct: 61 MPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIESPRESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|160896053|ref|YP_001561635.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160361637|gb|ABX33250.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 286
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 156/273 (57%), Gaps = 2/273 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + CI G + GGN ++++ PFE+V + G +G F++ N KV+K +
Sbjct: 1 MLVIIGYIVAFGCIFGTYVLHGGNVQVILKALPFEMVTIGGGAIGAFIVCNQPKVLKATA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + + + +++ LLY ++ +K E+ ++ P S IFT P +L
Sbjct: 61 KAIPGVMKSSRYTKARFMELMALLYEILQKARKEGLMSIESDVEAPNESPIFTKYPELLA 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN S+EIE+LMD EI+ E P +A++ + +LPA GI+
Sbjct: 121 DHHVVEFLTDYLRMMVSGNLNSHEIESLMDSEIEAHHAEAHAPVNALTRLAGALPAFGII 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y+L P+ ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPSVLGGMIASALVGTFLGILLAYALVEPMAGLVEQRAQDAAKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+K L+A M G P AIE+GRKVL +ERP
Sbjct: 241 ECIKTTLLASMQGYNPATAIEFGRKVLFSTERP 273
>gi|323258568|gb|EGA42234.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
Length = 284
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 152/261 (58%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+ GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + ++ +F +
Sbjct: 2 TVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKAIPLLFRRSKYTK 61
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
Y D+L LLY LM ++ E I++P S IF S P +L + + FI DY+R+
Sbjct: 62 SMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADTVMLDFIVDYLRL 121
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
II GN +EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+ +
Sbjct: 122 IISGNMNPFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAVMGVVHALASAD 181
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ LG I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +NG
Sbjct: 182 RPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCVKITLLSNLNGY 241
Query: 253 IPQVAIEYGRKVLPLSERPSI 273
P +A+E+GRK L SERPS
Sbjct: 242 APPIAVEFGRKTLYSSERPSF 262
>gi|123442805|ref|YP_001006782.1| flagellar motor protein MotA [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332161301|ref|YP_004297878.1| flagellar motor protein MotA [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|122089766|emb|CAL12619.1| chemotaxis MotA protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318605217|emb|CBY26715.1| flagellar motor rotation protein MotA [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325665531|gb|ADZ42175.1| flagellar motor protein MotA [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 295
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYIIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ LLY L+ ++ E I+ P S IF++ P +L +
Sbjct: 61 LPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIESPLESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 VLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|37525778|ref|NP_929122.1| flagellar motor protein MotA [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785207|emb|CAE14142.1| chemotaxis protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 295
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 160/280 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + +IGG+ +GG+ L QP E +I+ GAG+G F++ N K IK +
Sbjct: 1 MLVLLGYIVVFGAVIGGYLIVGGHLGALYQPAEFLIITGAGIGAFIVGNNGKAIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ LL+ L+ + E I+ P S IFT P +L++
Sbjct: 61 LPKVMRRSKYNKVMYMDLMALLFRLLAKSRMHGVLALERDIEHPQQSDIFTQYPRLLKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR+I+ GN +EIE LMDEEI+ E P ++ +G+SLPA GIV A
Sbjct: 121 HLMDFITDYMRLIVSGNMNPHEIEALMDEEIETYEQESEIPATSLMMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVNALGSADRPAGELGVLIAHAMVGTFLGILLAYGFISPLATLLRQRSGEHLKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K L++ +NG PQ+A+E+GRK L L++RPS + + V
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYLTDRPSFTELEEHV 280
>gi|238758126|ref|ZP_04619306.1| hypothetical protein yaldo0001_12660 [Yersinia aldovae ATCC 35236]
gi|238703664|gb|EEP96201.1| hypothetical protein yaldo0001_12660 [Yersinia aldovae ATCC 35236]
Length = 295
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 160/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYMIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P +L +
Sbjct: 61 MPKLMHRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIENPLESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|238795649|ref|ZP_04639163.1| hypothetical protein ymoll0001_15000 [Yersinia mollaretii ATCC
43969]
gi|238720375|gb|EEQ12177.1| hypothetical protein ymoll0001_15000 [Yersinia mollaretii ATCC
43969]
Length = 295
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 160/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYIIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P +L +
Sbjct: 61 MPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIENPRESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|332531609|ref|ZP_08407506.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
gi|332038972|gb|EGI75401.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
Length = 285
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 2/273 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + +L I G F GGN IL++ PFE+ + G LG FV N KV++ +
Sbjct: 1 MIVIIGYAVAMLAIFGTFVLHGGNVGILLEALPFEMATIFGGALGAFVAGNQPKVLRATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ + ++ Y D++ LLY ++ +K E +++P+ S +F + P V
Sbjct: 61 AQVPTVLKGSKYTKERYMDLMALLYDILQKARKEGLMAIEKDVEEPHESPLFQAHPIVGN 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN ++EIE LMD EID E P A+ + +LPA GIV
Sbjct: 121 DHHVVEFTTDYLRMMVSGNLNAHEIETLMDSEIDTHHQEAHAPAMAVLRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P ILG I +L GT LGI+L+Y++ PL + ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPAILGGMIASALVGTFLGIMLAYAIFEPLGTLLEQKAADGTKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+K L+A M G P AIE+GRKVL +ERP
Sbjct: 241 QCIKSTLLASMQGYNPATAIEFGRKVLFSTERP 273
>gi|209965967|ref|YP_002298882.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
gi|209959433|gb|ACJ00070.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
Length = 286
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 164/275 (59%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IGLF C+ GG+ GG I+++ P E++I+ G+ + F++AN VIK S
Sbjct: 1 MFPAIGLFGVFFCVFGGYIIFGGKIGIIVEALPKEVMIIGGSAVASFLIANSSHVIKKSM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ IFG + Y ++L LLY ++ +K E HI+ P S IF + P++++
Sbjct: 61 ADIKRIFGGARFHKKEYMELLSLLYQILKTMKTKGVLAIEQHIEKPMESNIFNAYPSIMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ FI DY+RM +G +E+E+LM++EI+ +E L HA+ M +++PA+GIV
Sbjct: 121 DPFTIKFIADYLRMFSIGVDNPHEMESLMEQEIEKAKHEDLHSSHALQTMADAMPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++++ P++LG IG +L GT +GI LSY + P+ S++K+ ++ + Y
Sbjct: 181 AAVLGVIKTMASINEPPEVLGKLIGGALVGTFMGIFLSYCIVAPIASRLKAITEEEMQFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++++ A+ A++ G PQV+IE RK +P P
Sbjct: 241 MVIQAAITAHLAGYAPQVSIEAARKKVPSDYMPDF 275
>gi|332095071|gb|EGJ00105.1| chemotaxis protein motA [Shigella dysenteriae 155-74]
Length = 276
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 152/252 (60%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ L QP E+VI+AGAG+G F++ N K IK + +L +F + Y D+L L
Sbjct: 3 GGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLAL 62
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
LY LM ++ E I++P S IF S P +L ++ + FI DY+R+II G+ ++
Sbjct: 63 LYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTF 122
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+G+ + LG
Sbjct: 123 EIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAELGAL 182
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
I ++ GT LGI+L+Y +PL S ++ + ++ VK L++ +NG P +A+E+G
Sbjct: 183 IAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVEFG 242
Query: 262 RKVLPLSERPSI 273
RK L SERPS
Sbjct: 243 RKTLYSSERPSF 254
>gi|242238951|ref|YP_002987132.1| flagellar motor protein MotA [Dickeya dadantii Ech703]
gi|242131008|gb|ACS85310.1| flagellar motor protein MotA [Dickeya dadantii Ech703]
Length = 295
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 163/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TI I+GG+ +GG L QP E++I+ G+ +G F++ N K IK + +
Sbjct: 1 MLVILGYLVTIGSILGGYLIVGGELGALYQPSELLIIGGSAIGAFIVGNTGKGIKGTLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ +L+ LM ++ E ID+P S IF++ P +L +N
Sbjct: 61 LPTLFKGSKYTKAVYMDLMAVLFRLMAKSRQQGMLSLEFDIDNPKESEIFSTYPRILSDN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 YVIEFVTDYLRLMVSGNMNAFEIETLMDEEIETVEHEIEVPATSLNLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHSLAFVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLASLLRQKNSEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L + RPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTVRPSF 273
>gi|187920654|ref|YP_001889686.1| flagellar motor component-like protein [Burkholderia phytofirmans
PsJN]
gi|187719092|gb|ACD20315.1| flagellar motor component-like protein [Burkholderia phytofirmans
PsJN]
Length = 289
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 157/289 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ L+QPFE++ + GA +G FV++NP +K + +
Sbjct: 1 MFVAIGWLLVIGSVIGSFVGVGGHLPALLQPFELLCIFGAAIGAFVVSNPTSTLKKTIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P S IF VLE++
Sbjct: 61 IPSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEADVGAPEESVIFQKYSHVLEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y P+ + + + + Y
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPVADLLNAKGRAEAKPYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A ++G P +A+E+GRKVL ++RPS + + V K A
Sbjct: 241 VKAVLLASLSGYAPPIAVEFGRKVLFTADRPSFQELDDAVRATKMPKSA 289
>gi|238788296|ref|ZP_04632090.1| hypothetical protein yfred0001_7390 [Yersinia frederiksenii ATCC
33641]
gi|238723542|gb|EEQ15188.1| hypothetical protein yfred0001_7390 [Yersinia frederiksenii ATCC
33641]
Length = 295
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYIIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I+ P S IF++ P +L +
Sbjct: 61 MPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIESPLESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 VLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|225874274|ref|YP_002755733.1| putative chemotaxis MotA protein [Acidobacterium capsulatum ATCC
51196]
gi|225793247|gb|ACO33337.1| putative chemotaxis MotA protein [Acidobacterium capsulatum ATCC
51196]
Length = 299
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 158/272 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ I I ++GGF G +L+QP E++I+ GA +G ++ANPL+++K
Sbjct: 1 MLAIVGILIVIGAVLGGFLMEKGPLLVLMQPAELLIIGGAAVGTMLIANPLRILKAIAGG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G + G+D Y LK+LY L+ ++ E I++P S +F + P L+++
Sbjct: 61 LKGVLGKSSFGKDNYLTTLKMLYELLNKARRLGMLGIEADIENPAESQLFQNYPNFLKHH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CD +RM I GN +++++ +M+ +I++ + ++P A++ M +SLP +GIV A
Sbjct: 121 HHRDFVCDTLRMAISGNVDAFDMDQMMERDIEVHHHGAMQPITALTTMADSLPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG L P +G + +L GT LGI++ Y PL+S + T ++ +
Sbjct: 181 VLGVVITMGALDGPPGEIGHKVAAALVGTFLGILMCYGFVGPLSSSMSKTVDDENAYLYV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ LI+++ G P +AIE GR+ +P RP
Sbjct: 241 LRIVLISFIKGQPPVLAIEAGRRAIPSHVRPG 272
>gi|238785461|ref|ZP_04629445.1| hypothetical protein yberc0001_17850 [Yersinia bercovieri ATCC
43970]
gi|238713616|gb|EEQ05644.1| hypothetical protein yberc0001_17850 [Yersinia bercovieri ATCC
43970]
Length = 295
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 158/273 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F+ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYMIVGGHLGALYQPAEFLIIGGAGIGAFIAGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + Y D++ LLY L+ ++ E I++P S IF++ P +L +
Sbjct: 61 MPRLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIENPRESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 ILVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|302878238|ref|YP_003846802.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302581027|gb|ADL55038.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 284
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 157/282 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + GGF GG+ L QP E++++ G +G F + N + IK +
Sbjct: 1 MLVIVGYVVVCGSVFGGFAMAGGHLGALWQPLELLMIFGGAMGAFCVGNNMTAIKATVKD 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +DTY +++ L+Y L+ ++K E ++ P S +F+ P +L ++
Sbjct: 61 LPSLFKGSKYSKDTYMELMALMYELLTKVRKEGLMSIEGDVEKPEESPVFSKYPKILSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN + EIENLMD E++ +E L H I+ + + +PA GIV A
Sbjct: 121 HVVEFITDYLRIMVSGNLNAMEIENLMDVELETHHHEALVSSHVIAKLADGMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL S ++ + +++
Sbjct: 181 VMGVVHTMESVGMPPAELGMLIAHALVGTFLGILLAYGFVGPLASLLEQKAEEGGKIFQT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A +NG P +A+E+GRK L +RP+ + + V Q
Sbjct: 241 IKVTLLANLNGYAPAMAVEFGRKALSSGDRPNFTELEEHVKQ 282
>gi|239817127|ref|YP_002946037.1| chemotaxis MotA protein [Variovorax paradoxus S110]
gi|239803704|gb|ACS20771.1| chemotaxis MotA protein [Variovorax paradoxus S110]
Length = 286
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 156/261 (59%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+ GG+ MGG+ +L QP E++++ GA LG F+ N K IK + L + +
Sbjct: 13 AVFGGYALMGGHFGVLFQPVELLMIGGAALGAFLAGNNGKTIKATLKELPLLLRSSKHNR 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
Y D+L LLY L+ +K + E+ ++DP S IF P +L + + F+CDY+R+
Sbjct: 73 QLYLDLLALLYELLAKARKEGMMKLESDVEDPAQSEIFRRYPEILADAGVMEFLCDYLRL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I GN ++EIE LMD EI+ I +E P H++S + ++LPA+GIV A++G++ A+G+
Sbjct: 133 VISGNTDAFEIEALMDHEIETIKHEAEMPVHSLSRVSDALPALGIVAAVMGVVHALGSAD 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
P +G I ++ GT LG++L+Y +PL S I + +LY K L+A +NG
Sbjct: 193 LPPSEMGALIAHAMVGTFLGVLLAYGFVSPLASLIDQKVSEGMKLYQCTKVTLLASLNGY 252
Query: 253 IPQVAIEYGRKVLPLSERPSI 273
PQ+A+E+GRKVL +ERPS
Sbjct: 253 APQLAVEFGRKVLFSTERPSF 273
>gi|58038612|ref|YP_190576.1| flagellar motor protein MotA [Gluconobacter oxydans 621H]
gi|58001026|gb|AAW59920.1| Chemotaxis MotA protein [Gluconobacter oxydans 621H]
Length = 288
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 157/276 (56%), Gaps = 2/276 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + C+ G F A GG P + PFE++ + GA +G F+MAN L +K
Sbjct: 1 MFIIIGLVVVLGCVFGSFVASGGAIGPLVSSMPFELLTILGAAVGTFLMANSLGAVKHLP 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ + G+ Y D+L LL+ + E+HI+DP ST+F + P + +
Sbjct: 61 AGIKKAMKGSQYGRADYVDLLSLLFHIAKLASSKGFMALESHIEDPQGSTVFGAFPKIRD 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N + +FICDY+RM + Y+++ +M E+ + E++ HA+ + ++LPA+GIV
Sbjct: 121 NPHVCSFICDYLRMAGMNATDPYQMDEVMGNELKKNMREEMHLPHALQSVSDALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++S+ P +LG I +L GT LGI+L+Y + P+ S++ ++
Sbjct: 181 AAVLGVIKTMASISKPPIVLGEMIAGALVGTFLGILLAYGIVAPIASRLGGVVEEESSYL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+V+ ++A++ G PQV++E GRK +P PS +
Sbjct: 241 DLVRSVIVAHLQGNAPQVSVEIGRKSIPSDLMPSFQ 276
>gi|283784103|ref|YP_003363968.1| lateral flagellar motor protein A [Citrobacter rodentium ICC168]
gi|282947557|emb|CBG87110.1| lateral flagellar motor protein A [Citrobacter rodentium ICC168]
Length = 287
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 149/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL + + C+ GG++ GG + QP EIVI+ GAG G ++ NP V+K+
Sbjct: 1 MQKVLGLLVVLGCVFGGYFEAGGQLIAIWQPAEIVIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + G K LG + +L LY L+ ++ G + HI+ P ST+F P VL
Sbjct: 61 IKGVIGKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTVFQKYPQVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D + E L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTVEEELLAPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFFCYCLMDPLANSMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A G +A++ GRK+L L+ +P+
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPT 272
>gi|146284109|ref|YP_001174262.1| flagellar motor protein MotA [Pseudomonas stutzeri A1501]
gi|145572314|gb|ABP81420.1| chemotaxis protein MotA [Pseudomonas stutzeri A1501]
gi|327482426|gb|AEA85736.1| flagellar motor protein MotA [Pseudomonas stutzeri DSM 4166]
Length = 283
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 160/283 (56%), Gaps = 10/283 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M IIG+ + ++GGF GG LI PFE++I+ GA LGGF+ ANP + V K
Sbjct: 1 MVKIIGIIVVFASVLGGFVLSGGKIGALIHPFEVMIIGGAALGGFLQANPGSTTMIVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++F + Y +VL LLY ++ ++ E ++DP S +F+ P
Sbjct: 61 S----LKMFSTR-FTHAYYLEVLSLLYAILNKSRREGMMAIEADLEDPAASPLFSKYPGF 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T F CDY+R++ GN +E+E L D E+ + E P HA+S + + LPA+G
Sbjct: 116 LQDERMTAFTCDYLRIMSSGNMAPHELEGLFDMELTSLKEELDHPAHAVSKVADGLPAMG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M L+++ ++G +G +L GT LGI+ SY PL + ++ ++
Sbjct: 176 IVAAVLGIVITMSILAEADNAMIGYKVGSALVGTFLGILASYGFFGPLAAALEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+Y +K L+A +G P +A+E+GRKVL + RPS + Q
Sbjct: 236 NVYESIKATLVASASGMPPSLAVEFGRKVLYPAHRPSFSELEQ 278
>gi|157145318|ref|YP_001452637.1| flagellar motor protein MotA [Citrobacter koseri ATCC BAA-895]
gi|157082523|gb|ABV12201.1| hypothetical protein CKO_01058 [Citrobacter koseri ATCC BAA-895]
Length = 278
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 148/252 (58%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ L QP E VI+ GAG+G F++ N K IK + +L +F + Y D+L L
Sbjct: 4 GGHLGALYQPAEFVIIGGAGIGAFIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLAL 63
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
LY LM ++ E I++P S IF S P +L + + FI DY+R+II GN ++
Sbjct: 64 LYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAVMLDFIVDYLRLIISGNMNTF 123
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EIE LMDEEI+ E P ++++ MG+SLPA GIV A++G++ A+ + + LG
Sbjct: 124 EIEALMDEEIETHESEAEVPANSLALMGDSLPAFGIVAAVMGVVHALASADRPAAELGAL 183
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
I ++ GT LGI+L+Y +PL S ++ + ++ VK L++ +NG P +A+E+G
Sbjct: 184 IAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAVEFG 243
Query: 262 RKVLPLSERPSI 273
RK L SERPS
Sbjct: 244 RKTLYSSERPSF 255
>gi|157371227|ref|YP_001479216.1| flagellar motor protein MotA [Serratia proteamaculans 568]
gi|157322991|gb|ABV42088.1| chemotaxis protein MotA [Serratia proteamaculans 568]
Length = 298
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 162/270 (60%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + ++ +
Sbjct: 6 ILGYLVVLGAVFGGYLIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKSTLRAIPK 65
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ +D Y D++ LL++L+ ++ E ID+P S IF++ P +L +N L
Sbjct: 66 LMRRSKYSKDLYMDLMALLFLLLAKSRQQGMLSLEFDIDNPQESEIFSNYPRILADNTLV 125
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI DY+R+++ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A++G
Sbjct: 126 EFITDYLRLMVSGNMNAFEIEALMDEEIETFEQESEVPAGSLAMVGDSLPAFGIVAAVMG 185
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++ +K
Sbjct: 186 VVHALASADRPAAELGALIANAMVGTFLGILLAYGFISPLATLLRQKSAENVKMMQCIKV 245
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 246 TLLSSLNGYAPQIAVEFGRKTLYTTERPSF 275
>gi|238764368|ref|ZP_04625318.1| hypothetical protein ykris0001_37310 [Yersinia kristensenii ATCC
33638]
gi|238697394|gb|EEP90161.1| hypothetical protein ykris0001_37310 [Yersinia kristensenii ATCC
33638]
Length = 295
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK +
Sbjct: 1 MLVILGYIVVLGAVFGGYIIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATLKV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I+ P S IF++ P +L +
Sbjct: 61 MPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIESPLESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEIPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + +++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETNKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|269138689|ref|YP_003295390.1| flagellar motor protein [Edwardsiella tarda EIB202]
gi|267984350|gb|ACY84179.1| flagellar motor protein [Edwardsiella tarda EIB202]
gi|304558695|gb|ADM41359.1| Flagellar motor rotation protein MotA [Edwardsiella tarda FL6-60]
Length = 269
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 153/255 (60%)
Query: 28 LIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMY 87
+ QP E++I+ GAG+G F++ N K IK + +L ++ + Y DV+ L+Y L+
Sbjct: 1 MYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRTLPKLARGSKYNKALYMDVMGLMYQLLA 60
Query: 88 NLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLM 147
++ E I+DP S IF++ P ++ +N L FI DYMR+II GN ++EIE+LM
Sbjct: 61 KSRQQGMLSLERDIEDPKASEIFSNYPRLIADNTLIEFITDYMRLIISGNMNAFEIESLM 120
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLT 207
DEEI+ E P +++ +G+SLPA GIV A++G++ A+ + + LG I ++
Sbjct: 121 DEEIETFEQEAEVPAGSLAAVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMV 180
Query: 208 GTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPL 267
GT LGI+L+Y +PL S ++ + ++ +K L++ +NG PQ+A+E+GRK L
Sbjct: 181 GTFLGILLAYGFISPLASLMRQKSAETTKMMHCIKTTLLSSLNGYAPQIAVEFGRKTLYS 240
Query: 268 SERPSIEIVAQEVLQ 282
+ERPS + + V Q
Sbjct: 241 TERPSFIELEEHVRQ 255
>gi|300717115|ref|YP_003741918.1| flagellar motor protein [Erwinia billingiae Eb661]
gi|299062951|emb|CAX60071.1| Flagellar motor protein [Erwinia billingiae Eb661]
Length = 295
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 161/280 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + ++GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLIIIGYILVLGSVLGGYAMVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LLY +M ++ E I+ P S IF + P +L +
Sbjct: 61 LPLLMRGSKYNKAVYMDLMALLYRIMAKSRQQGMLSLEADIESPQESEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+++ GN ++EIE LMDEEI+ +E P A+ +G+SLPA GIV A
Sbjct: 121 RLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPATALQTVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + + + LG ++ ++ GT LGI+L+Y +PL ++ + ++
Sbjct: 181 VMGVVHTLASADRPAAELGASVAHAMVGTFLGILLAYGFISPLAGVLRQKCAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K L++ +NG PQ+A+E+GRK L ++RPS + + V
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTDRPSFTELEEHV 280
>gi|307131628|ref|YP_003883644.1| flagellar motor rotation protein motA [Dickeya dadantii 3937]
gi|306529157|gb|ADM99087.1| Flagellar motor rotation protein motA [Dickeya dadantii 3937]
Length = 295
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 168/289 (58%), Gaps = 4/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TI I+GG+ +GG L QP E++I+ GA G F++ N K IK + +
Sbjct: 1 MLVILGYLVTIGSILGGYLIVGGELGALYQPSELLIIGGAAAGAFIVGNNGKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ +L+ LM ++ E ID+P S IF++ P +L ++
Sbjct: 61 LPTLLKGSQYTKAVYMDLMAVLFRLMAKSRQQGMLSLEFDIDNPKESEIFSNYPRILSDD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 YIVEFVTDYLRLMVSGNMNAFEIETLMDEEIETVEHEVEVPATSLNLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHSLAFVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLASLLRQKNSEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+K L++ +NG PQ+A+E+GRK L + RPS E+ ++ N KA
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTVRPSF----TEMEEHIRNVKA 285
>gi|52842528|ref|YP_096327.1| flagellar motor protein MotA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629639|gb|AAU28380.1| chemotaxis (motility protein A) transmembrane [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 301
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 162/280 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K S
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAMGSFIVGNNITVLKSVLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFT P ++ N+
Sbjct: 61 LPATFRGQKSAKQASNDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTGYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A ++ P +A E+GRKVL S+RPS + E+
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEI 280
>gi|329888438|ref|ZP_08267036.1| chemotaxis protein motA [Brevundimonas diminuta ATCC 11568]
gi|328846994|gb|EGF96556.1| chemotaxis protein motA [Brevundimonas diminuta ATCC 11568]
Length = 289
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 161/275 (58%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G F GG ++ P+E++ + GAG+ F+++N L VIK +
Sbjct: 1 MFQIIGIVMLFAMVFGSFLLHGGKMATILYSLPYELMAIFGAGIAAFLISNSLPVIKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L + F + Y D+L LL+ L +K E+HI+ P S IF P VL+
Sbjct: 61 GGLGKCFAGPKWKKQDYKDLLSLLFQLTKTMKSKGVIALESHIEKPAESAIFQKYPKVLK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ T FICD +RM+ + ++IE+ M+++++ +E L P HA+ + + LPA+GIV
Sbjct: 121 DHFATDFICDTLRMMTMNLEDPHQIEDAMEKQLEKHHHEALAPAHALQTLADGLPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++++ P++LG IG +L GT LG+ L+Y L P S++ + ++ Y
Sbjct: 181 AAVLGIIKTMGSITEPPEVLGGMIGGALVGTFLGVFLAYGLVGPFASRLNAIVEEEGAYY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
I++ L+A+++G Q+++E GR +P + +PS
Sbjct: 241 KIIQSVLVAHLHGNAAQISVEIGRGDIPSTAQPSF 275
>gi|238751744|ref|ZP_04613232.1| hypothetical protein yrohd0001_35130 [Yersinia rohdei ATCC 43380]
gi|238710015|gb|EEQ02245.1| hypothetical protein yrohd0001_35130 [Yersinia rohdei ATCC 43380]
Length = 295
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 157/273 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + ++GG+ +GG+ L QP E +I+ GAG+G F+ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVLGGYSIVGGHLGALYQPAEFLIIGGAGIGAFIAGNNGKAIKATIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I+ P S IF++ P VL +
Sbjct: 61 MPKLMRRSKYNKILYMDLMALLYRLLAKSRQQGMLSLERDIESPLESEIFSNYPRVLADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAVVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVNTLAAADRPAAELGALIAHAMVGTFLGILLAYGFVSPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 241 VKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 273
>gi|288959637|ref|YP_003449978.1| chemotaxis protein [Azospirillum sp. B510]
gi|288911945|dbj|BAI73434.1| chemotaxis protein [Azospirillum sp. B510]
Length = 286
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 158/278 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG I I + GG+ GG+ +L PFE +I+ G+G G F +ANP V+ +G
Sbjct: 1 MFVMIGFGIVIFSVFGGYILGGGHLGVLWMPFEFMIILGSGAGAFFIANPKSVVTHTGKE 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F ++ + +VL ++Y + K E HI+ P +S +F P ++
Sbjct: 61 LGHLFKGPKYKKEDFLEVLTMMYQVFKIAKTKGLLALEQHIEKPEDSPLFQQFPKFYGDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+C Y+R++ +G +E+ +LMDE+I+ + +E + AI + +++PA+GIV A
Sbjct: 121 HAIAFLCTYLRLMSLGADNPHELVDLMDEDIETMHHEHQRISDAIQAVADAVPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I MG++++ P++LG IG +L GT GI+++Y P+ S +K+ + + Y
Sbjct: 181 VLGVIHTMGSITEPPEVLGKLIGGALVGTFTGILVAYGFLAPIASGLKNIYHAEGKYYQA 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+K LIA+++G P +++EY R VL RP+ V +
Sbjct: 241 MKTGLIAHLSGYAPAISVEYARNVLEPEYRPTFAQVEE 278
>gi|303249272|ref|ZP_07335505.1| chemotaxis protein MotA [Desulfovibrio fructosovorans JJ]
gi|302489311|gb|EFL49267.1| chemotaxis protein MotA [Desulfovibrio fructosovorans JJ]
Length = 284
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 158/274 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + + C+IGGF GG+ +L+QP E++I+ GA LG F+++ P V+ +
Sbjct: 1 MFVIIGIVVVLGCVIGGFLLEGGHLGVLMQPIELLIIGGAALGSFLISAPKSVVIGTFKH 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L +F K Y D+L LL+ LM ++ E H+ P S+ P + +N
Sbjct: 61 ILHVFSGKEASSSDYQDLLTLLFELMNIARRDGIVALEPHVSQPEQSSTINRYPNIAKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICD ++ ++ ++ ++LM +I + + + A++ + +SLP +GIV A
Sbjct: 121 QLAYFICDNIKALLSEGIDAHRYDDLMRTDIATLHHHAMIAPSAVTRVADSLPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG +++ P++LG +IG +L GT LGI++ Y P+ S ++ Q ++ ++
Sbjct: 181 VLGIVLTMGKINEPPEVLGHSIGAALVGTFLGILMCYGFVGPMASNLEYQAKAQQQMLLV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
K+ L A+ +G P +++E GR+ +P RP++E
Sbjct: 241 AKEVLAAFNSGFSPMLSVEMGRRAIPDDVRPTME 274
>gi|85058001|ref|YP_453703.1| flagellar motor protein MotA [Sodalis glossinidius str.
'morsitans']
gi|84778521|dbj|BAE73298.1| chemotaxis protein MotA [Sodalis glossinidius str. 'morsitans']
Length = 298
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 153/274 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + I GGF G L QP E +I+ GAGLG F++ N K I + S
Sbjct: 1 MLVIVGYIIVFMSIFGGFLLAEGQLGALFQPAEFMIIVGAGLGTFIVGNNGKAIFATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + Y DV+ L+Y L+ ++ E IDDP+NS IF P++L +
Sbjct: 61 FPRLFHSSRYNKAMYMDVMALMYRLLSKSRQSGLITLEKEIDDPHNSVIFAHYPSLLADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN YEIE LM+EEI+ E P ++ +G++LPA GI+ A
Sbjct: 121 LVIDFLIDYLRLMVSGNLNVYEIEALMNEEIETYEQENDIPVSSLLQVGDALPAFGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + LG I ++ GTLLGI+L+Y PL + +K + ++
Sbjct: 181 VMGVVNALAAADRPAGELGALIANAMVGTLLGILLAYGCVMPLGALLKQKGDEHIKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ L++ +NG P +AIE+GRK L SERPS +
Sbjct: 241 IRVTLLSSLNGYAPPIAIEFGRKTLYSSERPSFD 274
>gi|104783885|ref|YP_610383.1| flagellar motor protein MotA [Pseudomonas entomophila L48]
gi|95112872|emb|CAK17600.1| Putative flagellar motor MotA protein [Pseudomonas entomophila L48]
Length = 283
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP + VIK
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTMHVIKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+DP S IF P V
Sbjct: 61 S----LKMFGTR-FTHTFYLEVLGLVYEILNKSRREGMMAIEGDIEDPAASPIFAKYPAV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ + +T FICDY+R++ GN +E+E L D E+ + E P HA++ + + +P G
Sbjct: 116 MGDERMTAFICDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + ++ ++
Sbjct: 176 IVAAVLGIVVTMASLGDGDQKSIGLHVGAALVGTFFGILAAYGFFGPLANALRHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NVYEAIKASLVASASGMPPSLAVEFGRKVLYPGHRPSFAELEQAV 280
>gi|326795805|ref|YP_004313625.1| flagellar motor stator protein MotA [Marinomonas mediterranea
MMB-1]
gi|326546569|gb|ADZ91789.1| flagellar motor stator protein MotA [Marinomonas mediterranea
MMB-1]
Length = 284
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 167/290 (57%), Gaps = 12/290 (4%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G+ + I+ ++ G+ A GN L QPFE++I+ GA LG F++AN L +
Sbjct: 1 MFALLGILVVIVSVVTGYLASHGNIIALWQPFEVLIICGAALGAFMIANSLTLQIRVFKM 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE----TENHIDDPYNSTIFTSIPTV 116
+ +IF LG + K L +Y+L + SR E EN I+ P+ S +F P V
Sbjct: 61 IPQIF----LGSRHKKEFYKQLLGALYSLFQKSRLEGFLAIENDIELPFESNVFQRFPDV 116
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L + L F+ D R+ + S+E+E L+DEEI+ I E KP HA++ + E+LP G
Sbjct: 117 LNDEHLIYFLTDNFRIYTLTGLPSHELEALIDEEIEQISEELEKPAHAVNRVAEALPGFG 176
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LGI+ MG++ S + +GT + +L GT LGI +Y P ++ +++ L QH
Sbjct: 177 IVAAVLGIVITMGSIGGSMEEIGTHVAAALVGTFLGIFFAYGFVGPASAHLEA--LGQHE 234
Query: 237 L--YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
L Y+ VK A+I+ ++G P VA+E GRK+LP RPS +++++ QY
Sbjct: 235 LKAYMCVKAAVISIVSGHPPAVAVETGRKLLPPEMRPSFLELSEDIKQYR 284
>gi|148359857|ref|YP_001251064.1| chemotaxis motility protein A [Legionella pneumophila str. Corby]
gi|296107907|ref|YP_003619608.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
gi|148281630|gb|ABQ55718.1| chemotaxis (motility protein A) transmembrane [Legionella
pneumophila str. Corby]
gi|295649809|gb|ADG25656.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
Length = 301
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 163/280 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K S
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAIGSFIVGNNITVLKSVLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFTS P ++ N+
Sbjct: 61 LPATFRGQKSAKQASSDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTSYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A ++ P +A E+GRKVL S+RPS + E+
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEI 280
>gi|282599769|ref|ZP_05971808.2| chemotaxis MotA protein [Providencia rustigianii DSM 4541]
gi|282567759|gb|EFB73294.1| chemotaxis MotA protein [Providencia rustigianii DSM 4541]
Length = 300
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 160/290 (55%), Gaps = 3/290 (1%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG I +IGG+ +GG+ L QP E VI+ GAGLG FV+ N K I L
Sbjct: 9 LIGYIIVTAAVIGGYVMVGGHLGALYQPAEFVIILGAGLGAFVVGNSGKSIVALCKVLPR 68
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F A + D++ LL+ L+ ++ E I++P S IFT P +L++
Sbjct: 69 LFRRSAYNKAMSMDLMALLFQLLNKSRQQGLLALEKDIENPQESEIFTQYPRILKDPTAM 128
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI DY+R+++ N +S+EIE LMDEE++ E P ++ +GES+PA GIV A+LG
Sbjct: 129 MFIVDYLRLMVTSNLQSHEIEALMDEELETFRQENEVPATGLNMVGESMPAFGIVAAVLG 188
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+G + LG I ++ GT LGI+++Y PL S ++ +Q +L +K
Sbjct: 189 VVNALGAADRPAGELGALIAHAMVGTFLGILVAYGFILPLASLVRQRSTEQLKLMECIKV 248
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPS---IEIVAQEVLQYNHNKKAS 290
++ + G PQ+A+E+GRKVL +RPS +E +EV N + S
Sbjct: 249 TFLSSLQGYAPQIAVEFGRKVLFSVDRPSFIELEDKVREVKVGNRTTETS 298
>gi|197362084|ref|YP_002141721.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|205352374|ref|YP_002226175.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856556|ref|YP_002243207.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|197093561|emb|CAR59023.1| motility protein A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|205272155|emb|CAR37010.1| motility protein A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206708359|emb|CAR32663.1| motility protein A [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261247093|emb|CBG24914.1| motility protein A [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|301158443|emb|CBW17952.1| motility protein A [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
Length = 276
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 149/252 (59%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ L QP E+VI+ GAG+G F++ N K IK + ++ +F + Y D+L L
Sbjct: 3 GGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKAIPLLFRRSKYTKSMYMDLLAL 62
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
LY LM ++ E I++P S IF S P +L + + FI DY+R+II GN ++
Sbjct: 63 LYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAVMLDFIVDYLRLIISGNMNTF 122
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+ + + LG
Sbjct: 123 EIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAVMGVVHALASADRPAAELGAL 182
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +NG P +A+E+G
Sbjct: 183 IAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAVEFG 242
Query: 262 RKVLPLSERPSI 273
RK L SERPS
Sbjct: 243 RKTLYSSERPSF 254
>gi|307611159|emb|CBX00803.1| hypothetical protein LPW_25071 [Legionella pneumophila 130b]
Length = 301
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 163/280 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K S
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAIGSFIVGNNITVLKSVLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFTS P ++ N+
Sbjct: 61 LPATFRGQKSAKQASSDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTSYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A ++ P +A E+GRKVL S+RPS + E+
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEI 280
>gi|304321131|ref|YP_003854774.1| Flagellar motor protein MotA [Parvularcula bermudensis HTCC2503]
gi|303300033|gb|ADM09632.1| Flagellar motor protein MotA [Parvularcula bermudensis HTCC2503]
Length = 285
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 164/275 (59%), Gaps = 3/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+GL +T++ + GG+ GG I++ P+E++++ GA +G F+ AN IK +G
Sbjct: 1 MLAIVGLVVTLVMVFGGYLFAGGKLGIILHSLPYEMMMIGGAAVGAFLAANDFTRIKHAG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L+ F + Y ++L L++ L+ ++ S + E HI++P S IF P + +
Sbjct: 61 GDLVAAFAGAKWKKQDYQELLCLMHELIVVFRE-SPVDVEKHIEEPGESEIFGRYPRIAK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ICD +R +++ +++E L+++++D E + HA+ + ++LPA+GIV
Sbjct: 120 DKGAVELICDTIRSMLLNFDDVHQVEELLEKQLDQKKEESMHGAHAVEQVADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ + P++LG IG +L GT LG+ LSY++ P +++K+ R ++H+ Y
Sbjct: 180 AAVLGVIKTMASIDKPPEVLGKMIGGALVGTFLGVFLSYAVVGPFAARMKAVREEEHQFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++++ L++ ++ P + +E GR+ +P RPS
Sbjct: 240 ELIREVLVSSLHKHAPNICVEVGRRHVPSVMRPSF 274
>gi|237653885|ref|YP_002890199.1| flagellar motor protein MotA [Thauera sp. MZ1T]
gi|237625132|gb|ACR01822.1| flagellar motor protein MotA [Thauera sp. MZ1T]
Length = 284
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 169/281 (60%), Gaps = 3/281 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG ++ IL G YA+ G+ L P E + + G +GGFV N K IK + S
Sbjct: 1 MFLIIG-YVIILAASLGTYAVHGSLAALWVPMEYLAIIGLMIGGFVAGNGPKAIKGTLGS 59
Query: 61 L-LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L L + G K + Y D+L LL+ ++ ++K EN I++P +S IF+ P+V +
Sbjct: 60 LSLAVKGSK-YNKALYVDLLALLFEILAKVRKEGLMSIENDIENPDSSPIFSKYPSVAAD 118
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ F+ DY+RM++ GN ++EIENLMD EI+ E + H +S + +++PA GIV
Sbjct: 119 HHAVEFMTDYLRMMVGGNLNAFEIENLMDMEIETHHQEAHQAPHVVSKVADAVPAFGIVV 178
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++G++ MG++ Q P +LG IG +L GT LGI++SY P+ SQ++ + ++Y
Sbjct: 179 AVMGVVNVMGSVGQPPAVLGKMIGGALVGTFLGILVSYGFVAPIASQLEQKVEESGKIYQ 238
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++K L+A MNG PQVA+E+GRKVL ++RP + QE+
Sbjct: 239 VIKVVLLASMNGYAPQVAVEFGRKVLYSTDRPGFAELEQEI 279
>gi|254474842|ref|ZP_05088228.1| chemotaxis protein MotA [Ruegeria sp. R11]
gi|214029085|gb|EEB69920.1| chemotaxis protein MotA [Ruegeria sp. R11]
Length = 289
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 157/273 (57%), Gaps = 3/273 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ GG I+I+ PFE +++ GAG+G F+++N + +K +
Sbjct: 1 MLGIVGIVVIFVMVFGGYLLAGGKFAIIIKALPFEFMMIGGAGIGAFLISNDMGGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F D Y D+L LL+ L+ + + + E E HI+DP NS++F P +L
Sbjct: 61 KDLGKVFKGPKWKPDDYRDLLCLLFSLI-RIARANPVEVEQHIEDPENSSVFNRYPKILA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ I+ L+ + HA+ + + LPA+GIV
Sbjct: 120 DKEAVNLICDTMRSASMNYDDPHQVEEVLEKRIEANLHHAMHSSHALQSLADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++ Q P++LG IG +L GT LG+ L+Y + P ++KS + Y
Sbjct: 180 AAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGIVGPFAGKVKSVTEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
++++ L+A ++ + IE GR+ P RP
Sbjct: 240 SLIREVLVANLHNHAAAICIEVGRQNTPSHIRP 272
>gi|171057688|ref|YP_001790037.1| chemotaxis signal transduction protein CheY [Leptothrix cholodnii
SP-6]
gi|170775133|gb|ACB33272.1| chemotaxis signal transduction protein CheY [Leptothrix cholodnii
SP-6]
Length = 285
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 158/275 (57%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG + I CI G + GGN ++++ P+E++ + G LG FV N +KV+K +
Sbjct: 1 MFVLIGWGVAIGCIFGVYIIHGGNISVILKALPWEMITIFGGALGAFVANNQMKVLKATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L F + ++L L+Y ++ +K E I+DP++S +F P V
Sbjct: 61 KGLGACFKGSKYSKARAMELLALIYEILQKSRKEGLMSIEKDIEDPHSSPLFQKFPVVGN 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ +T FI DY+RM++ GN ++EIE+LMD E++ +E AI+ + +LPA GIV
Sbjct: 121 DHHVTEFITDYLRMMVSGNLNAHEIESLMDSELETHHHEAHSAAAAIARLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYGFAEPLAGLLEQKIDEDGKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A M G PQ+AIE+GRKVL +ERPS
Sbjct: 241 QCIKATLLASMQGYAPQIAIEFGRKVLYSTERPSF 275
>gi|119897739|ref|YP_932952.1| flagellar motor protein MotA [Azoarcus sp. BH72]
gi|119670152|emb|CAL94065.1| flagellar motor protein MotA [Azoarcus sp. BH72]
Length = 284
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 165/280 (58%), Gaps = 1/280 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG ++ IL G YA+ G+ L P E + + G +GGFV N K +K + S
Sbjct: 1 MFLIIG-YVIILAASVGTYAVHGSLAALWVPMEYLAIIGLMVGGFVAGNGPKAMKATLGS 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + Y D+L LLY ++ ++K EN +++P +S IF P+V ++
Sbjct: 60 LSLAVKGSPYNKALYMDLLSLLYEILAKVRKEGLMSIENDVENPDSSPIFGKYPSVTSDH 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+RM++ GN ++EIENLMD EI+ E H +S + + LPA GIV A
Sbjct: 120 HVVEFLTDYLRMMVGGNLNAFEIENLMDMEIETHHQEAHVAPHIVSKVADGLPAFGIVVA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ Q P +LG IG +L GT LGI+LSY + P+ SQI+ + ++Y +
Sbjct: 180 VMGVVNVMGSVGQPPAVLGKMIGGALVGTFLGILLSYGIVAPIASQIEQKVEESGKIYQV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K L+A MNG PQVAIE+GRKVL ++RP+ + QE+
Sbjct: 240 MKVVLLASMNGYAPQVAIEFGRKVLYANDRPTFSELEQEI 279
>gi|295095517|emb|CBK84607.1| Flagellar motor component [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 277
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 149/252 (59%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ L QP E+VI+ GAG+G F++ N K IK + ++ +F + Y D+L L
Sbjct: 4 GGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLAL 63
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
LY LM ++ E I++P S IF S P +L + + FI DY+R+II GN ++
Sbjct: 64 LYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNMNTF 123
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+ + + LG
Sbjct: 124 EIEALMDEEIETHESESEVPANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAELGAL 183
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
I ++ GT LGI+L+Y +PL S ++ + ++ VK L++ +NG P +A+E+G
Sbjct: 184 IAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAVEFG 243
Query: 262 RKVLPLSERPSI 273
RK L SERPS
Sbjct: 244 RKTLYSSERPSF 255
>gi|332527141|ref|ZP_08403218.1| chemotaxis signal transduction protein CheY [Rubrivivax
benzoatilyticus JA2]
gi|332111569|gb|EGJ11551.1| chemotaxis signal transduction protein CheY [Rubrivivax
benzoatilyticus JA2]
Length = 286
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 160/275 (58%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG I ++C+ G F GGN ++++ PFE+ + GA G F+ N KV+K +
Sbjct: 1 MFVIIGWVIVLVCVFGVFIVHGGNIGVILKALPFEMATIGGAAAGAFLANNQPKVLKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L + F + Y D++ LLY ++ +K E ++DP+NS +F TV
Sbjct: 61 RGLGKCFKGSKYTKARYMDLMALLYDILQKARKEGLMSIEKDVEDPHNSPLFQKYATVGN 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ ++ F+ DY+RM++ GN ++EIE+LMD EI+ +E+ AI + +LPA GIV
Sbjct: 121 DHHVSEFVTDYLRMMVSGNLNAHEIESLMDSEIETHHHEEHAAVAAIQRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y+ PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYAFAEPLAGLLEQKVDEATKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A M G PQVAIE+GRKVL +ERPS
Sbjct: 241 QCIKTTLLASMQGYAPQVAIEFGRKVLYSTERPSF 275
>gi|291613012|ref|YP_003523169.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583124|gb|ADE10782.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 284
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 156/282 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GGF GG+ L QP E++++ G LG F + N +K +K +
Sbjct: 1 MLVIVGYIVVLASVFGGFALAGGHLGALFQPIELLMIGGGALGAFFVGNTMKSVKATFKD 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + +++Y +++ L+Y L+ ++K E +++P S +F P VL ++
Sbjct: 61 LPTVLKGAKYNKESYMELMALMYELLGKVRKEGLMSIEGDVENPEESPVFAKYPKVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ DY+R+++ GN + EIENLMD EI+ +E + H I+ +G+ +PA GIV A
Sbjct: 121 HAVEFMTDYLRIMVSGNLNAMEIENLMDVEIETHHHEAMVSSHVIAKLGDGMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL ++ + ++
Sbjct: 181 VMGVVHTMESVGIPPAELGMLIAHALVGTFLGILLAYGFVGPLAGLLEQKAEEGSKMLQA 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A +NG P +A+E+GRK L +ERP + + V Q
Sbjct: 241 IKVVLLANLNGYAPAMAVEFGRKALNSTERPGFVELEEHVKQ 282
>gi|92114148|ref|YP_574076.1| chemotaxis MotA protein [Chromohalobacter salexigens DSM 3043]
gi|91797238|gb|ABE59377.1| chemotaxis MotA protein [Chromohalobacter salexigens DSM 3043]
Length = 293
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 160/290 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I I GG+ +GG+ L QP EI+++ GA +G F+ AN K IK + +
Sbjct: 1 MLILLGYLVVIASIGGGYTLVGGHFGALFQPSEILMIVGAAVGAFIAANNGKSIKATLRT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ + Y +++ L Y L+ ++ E ID P +S IF+ P + +
Sbjct: 61 FSKLKRTTKYNKTMYMELMALQYRLLTKARRDGMLAIERDIDAPEDSAIFSDYPKIANDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN +EI+ LM+ EID +E P HA+ +G+ LPA GIV A
Sbjct: 121 LIMAFITDYLRLMVSGNMDPFEIDTLMEHEIDTFQHEAEIPAHALHSVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G Q +G I +L GT LGI+L+Y P++ +++ + ++
Sbjct: 181 VMGVVHALGAADQGAAAMGQMIAQALVGTFLGILLAYGFVLPVSQRLQLQVTEAIKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V+ L+A +NG PQ+A+E+GRK L +ERPS + + V + + +
Sbjct: 241 VRVTLMASLNGMAPQLAVEFGRKALFTAERPSFTELEEHVRSEGSSTRGT 290
>gi|73539428|ref|YP_299795.1| chemotaxis MotA protein [Ralstonia eutropha JMP134]
gi|72122765|gb|AAZ64951.1| chemotaxis MotA protein [Ralstonia eutropha JMP134]
Length = 287
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + ++GG+ GG+ L QP E+VI+ GA G F+ N K +K + +
Sbjct: 1 MLVVLGYIVVVAAVLGGYAMTGGHMGALYQPAELVIIGGAAAGAFIATNTTKALKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F ++ Y DV+ LLY+L+ ++ E I DP S++F+ P +L +
Sbjct: 61 LPGLFKSSKYKKELYLDVMSLLYVLLSKARREGILFLEKEIADPAASSVFSQYPRILSDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+RM++ GN ++EIE LMD EI+ +E P HA+S +G++LPA GIV A
Sbjct: 121 VVMEFLTDYLRMMVNGNMNAFEIEALMDHEIETFRHEAEIPAHALSRVGDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + P LG I ++ GT LGI+L+Y +PL ++I+ + ++Y
Sbjct: 181 VMGVVHALASADLPPAELGALIAHAMVGTFLGILLAYGFVSPLAARIELQVSENVKVYEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A +NG P VA+E+GRKVL + RPS
Sbjct: 241 IKVVLLASLNGYAPLVAVEFGRKVLYSTVRPSF 273
>gi|238026966|ref|YP_002911197.1| flagellar motor component-like protein [Burkholderia glumae BGR1]
gi|237876160|gb|ACR28493.1| Flagellar motor component-like protein [Burkholderia glumae BGR1]
Length = 289
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ LIQPFE++ + GA G FV++NP + + +
Sbjct: 1 MFVAIGWIVVIGSVIGSFVGVGGHLPALIQPFELLCIFGAAAGAFVVSNPRDTLVKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + Y +++ LLY ++ ++ E+ I++P +S +F VL ++
Sbjct: 61 LPSCFKSSGYTKTQYLELIALLYEVLQKARREGMLSLESDIENPASSALFQKYSHVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E AI M + LPA GIV A
Sbjct: 121 HLLDFIIDYLRMMSTGNVNPLEMQDLMDEELGTHHAEMSVAPSAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAELGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRSSAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A ++G P VA+E+GRKVL S+RPS + + + V K A
Sbjct: 241 VKAVLLASLSGYAPAVAVEFGRKVLFTSDRPSFQELDEAVRATKTVKAA 289
>gi|238782804|ref|ZP_04626833.1| hypothetical protein yberc0001_34320 [Yersinia bercovieri ATCC
43970]
gi|238716227|gb|EEQ08210.1| hypothetical protein yberc0001_34320 [Yersinia bercovieri ATCC
43970]
Length = 298
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 162/270 (60%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
IIG + IL + GGF GG L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 6 IIGYLVVILTVFGGFSLAGGELAALYQPTELLIIGGAGVGAFIVGNNGKSIKATFKAFPH 65
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ + + Y D+L +LY+L+ ++ E+ I+DP NS IF++ P +L + L
Sbjct: 66 LLKGSSYTKVLYMDLLAMLYLLLTKSRQNGIMTLESDIEDPQNSAIFSAYPRLLADPMLM 125
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
TFI DY+RM++ G+ S+EIE LMDEEI+ +E P H+++ +G++LPA GIV A++G
Sbjct: 126 TFIIDYLRMMVSGSMNSFEIEALMDEEIETCEHEHEVPAHSLNAVGDALPAFGIVAAVMG 185
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+ + LG I ++ GT LGI+L+Y PL S ++ ++ ++ ++
Sbjct: 186 VVNALAAADRPAAELGELIAHAMVGTFLGILLAYGFVLPLASLLRQKSSEEIKMLQCIRV 245
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
L++ MNG PQ+A+E+GRK L ERP+
Sbjct: 246 TLLSSMNGYAPQIAVEFGRKTLFSPERPTF 275
>gi|54298208|ref|YP_124577.1| flagellar motor protein MotA [Legionella pneumophila str. Paris]
gi|53751993|emb|CAH13419.1| hypothetical protein lpp2266 [Legionella pneumophila str. Paris]
Length = 301
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 163/280 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K +
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAIGSFIVGNNITVLKSVLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFTS P ++ N+
Sbjct: 61 LPATFRGQKSAKQASSDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTSYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A ++ P +A E+GRKVL S+RPS + E+
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEI 280
>gi|260221394|emb|CBA29912.1| Chemotaxis protein motA [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 285
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 153/274 (55%), Gaps = 2/274 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G I I C+ G F GGN ++++ PFE++ + GA +G FV N +KVIK +
Sbjct: 1 MFVIVGWLICIACVFGVFIIHGGNISVVLKALPFELITIGGATVGAFVANNQMKVIKATI 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L F +D Y +++ LL+ L+ +K E +++P S IF P V
Sbjct: 61 KGLGSCFKGSKYTKDRYMELMALLFDLLQKARKEGLMAIEKDVEEPEQSEIFKKHPNVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN ++EIEN+MD I+ E AI + LPA GIV
Sbjct: 121 DHHVVEFVTDYLRMMVSGNLNAHEIENIMDGAIEAHHVEAHAAVAAIQRIAGGLPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y+ PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYAFAEPLAGLLEQKVEEGGKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K L+A M G P A+E+GR++L +ERP+
Sbjct: 241 QCIKTILLASMQGYNPSTAVEFGRQILFSTERPT 274
>gi|322433006|ref|YP_004210255.1| chemotaxis protein [Acidobacterium sp. MP5ACTX9]
gi|321165233|gb|ADW70937.1| chemotaxis protein [Acidobacterium sp. MP5ACTX9]
Length = 290
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 157/290 (54%), Gaps = 4/290 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IIG+ + +IGGF G +L+QP E+V + GA LG ++ANP+ ++K
Sbjct: 1 MISIIGIIVVFGAVIGGFMMEKGQLAVLVQPAELVTIGGAALGTLLVANPMHILKGIASG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ + G + Y D LK+++ L +K E ++ S IFT+ P ++++
Sbjct: 61 LMGVIGGSPFTKQRYLDTLKMMFDLFSKARKDGMVAIEADVEGADKSPIFTAYPKFMKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CD MRM I G ++++ +M+ ++D + P A++ + ++LP +GIV A
Sbjct: 121 HAVDFVCDTMRMAITGGVLPFDVDQMMELDMDTHHHSSSLPTTALNTVADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG L P+ +G + +L GT LGI+L Y + PL S + ++H Y I
Sbjct: 181 VLGIVITMGALGGPPEEIGHKVAAALVGTFLGILLCYGVLGPLASFMGKMNEEEHAYYHI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
++ ++A++ G P +A+E R+ +P RPS EV + NK A+
Sbjct: 241 LRVVMLAFIKGTSPILAVELARRAIPAHLRPSF----SEVEKACRNKSAA 286
>gi|291326362|ref|ZP_06124226.2| chemotaxis MotA protein [Providencia rettgeri DSM 1131]
gi|291314724|gb|EFE55177.1| chemotaxis MotA protein [Providencia rettgeri DSM 1131]
Length = 300
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 156/269 (57%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG I + +IGG+ +GG+ L QP E VI+ GAGLG FV+ N K I L +
Sbjct: 9 LIGYIIVTVAVIGGYIMVGGHLGALYQPAEFVIILGAGLGAFVVGNSGKSIVALCKVLPK 68
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + + D++ LL+ L+ ++ E ID+P S IF+ P +L++
Sbjct: 69 LFRRSSYNKTMSMDLMALLFQLLNKSRQQGLLALEKDIDNPSESEIFSQYPRILKDESTM 128
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI DY+R+++ N +S+EIE LMDEE++ E P ++ +G+S+PA GIV A+LG
Sbjct: 129 MFIVDYLRLMVSSNLQSHEIEALMDEELETFRQENEVPASGLNMVGDSMPAFGIVAAVLG 188
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+G+ + LG I ++ GT LGI+++Y PL + I+ +Q ++ +K
Sbjct: 189 VVNALGSADRPAGELGALIAHAMVGTFLGILVAYGFILPLAALIRLRSSEQLKMMECIKV 248
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ + G PQ+A+E+GRKVL ++RPS
Sbjct: 249 TFLSALQGYAPQIAVEFGRKVLFSADRPS 277
>gi|54295158|ref|YP_127573.1| flagellar motor protein MotA [Legionella pneumophila str. Lens]
gi|53754990|emb|CAH16478.1| hypothetical protein lpl2238 [Legionella pneumophila str. Lens]
Length = 301
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 163/280 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K S
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAIGSFIVGNNITVLKSVLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFT+ P ++ N+
Sbjct: 61 LPATFRGQKSAKQASSDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTNYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A ++ P +A E+GRKVL S+RPS + E+
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEI 280
>gi|288549779|ref|ZP_05968140.2| chemotaxis MotA protein [Enterobacter cancerogenus ATCC 35316]
gi|288317371|gb|EFC56309.1| chemotaxis MotA protein [Enterobacter cancerogenus ATCC 35316]
Length = 277
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 149/252 (59%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ L QP E++I+ GAG+G F++ N K IK + ++ +F + Y D+L L
Sbjct: 4 GGHLGALYQPAELIIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLAL 63
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
LY LM ++ E I++P S IF S P +L + + FI DY+R+II GN ++
Sbjct: 64 LYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNMNTF 123
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+ + + LG
Sbjct: 124 EIEALMDEEIETHESESEVPANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAELGAL 183
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
I ++ GT LGI+L+Y +PL S ++ + ++ VK L++ +NG P +A+E+G
Sbjct: 184 IAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAVEFG 243
Query: 262 RKVLPLSERPSI 273
RK L SERPS
Sbjct: 244 RKTLYSSERPSF 255
>gi|167035947|ref|YP_001671178.1| flagellar motor protein MotA [Pseudomonas putida GB-1]
gi|166862435|gb|ABZ00843.1| flagellar motor MotA protein [Pseudomonas putida GB-1]
Length = 283
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP + VIK
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTMHVIKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S +++FG + Y +VL L+Y ++ ++ E I+D S IF PTV
Sbjct: 61 S----MKMFGSR-FSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L + +T F+CDY+R++ GN +E+E L D E+ + E P HA++ + + +P G
Sbjct: 116 LADERMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L + + +G +G +L GT GI+ +Y PL ++ ++
Sbjct: 176 IVAAVLGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
LY +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NLYESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAV 280
>gi|260222451|emb|CBA32027.1| Chemotaxis protein motA [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 285
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 156/275 (56%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + + C+ G F GGN +++ P+E++ + GA +G F+ N +KVIK +
Sbjct: 1 MFVIIGWLVCLGCVFGVFIIHGGNISVILHALPWEMLTIGGATVGAFLANNQMKVIKKTV 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L F + Y ++L LL+ ++ +K E +++P S IF PTV
Sbjct: 61 AGLGACFKGSKYTKARYMELLALLFDILQKARKEGLMAIEKDVEEPEQSEIFKKYPTVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + FI DY+RM++ GN ++EIE++MD EI+ +E+ AI + LPA GIV
Sbjct: 121 DHHVIEFITDYLRMMVSGNLNAHEIESIMDSEIETHHHEEHAAVAAIQRIAGGLPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y+ PL ++ + + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYAFAEPLAGLLEQKVEEGSKEF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A M G P AIE+GRKVL +ERP+
Sbjct: 241 QCIKTTLLASMQGYNPSTAIEFGRKVLYSTERPTF 275
>gi|152986658|ref|YP_001351002.1| flagellar motor protein MotA [Pseudomonas aeruginosa PA7]
gi|150961816|gb|ABR83841.1| chemotaxis protein MotA [Pseudomonas aeruginosa PA7]
Length = 283
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 161/285 (56%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
MS IIG+ + ++GG+ GG +IQPFE++I+ GA LG F+ ANP + V+K
Sbjct: 1 MSKIIGIIVVFASVLGGYLLSGGKIGAIIQPFEVLIIGGAALGAFLQANPGNTFMVVLKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+ ++FG++ Q Y +VL +LY ++ ++ E I+DP S IF+ P V
Sbjct: 61 AP----KMFGHR-FTQTFYLEVLGMLYEILNKSRREGMMAIEADIEDPSASPIFSKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP G
Sbjct: 116 LKDERMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M L + + +G + +L GT LGI+ +Y PL ++ ++
Sbjct: 176 IVAAVLGIVITMALLGEGSQAEIGHHVAAALVGTFLGILAAYGFVGPLAGALEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
L+ +K L+A +G P +A+E+GRKVL RP+ + Q V
Sbjct: 236 NLFEAIKACLVASASGMPPSLAVEFGRKVLLPGHRPTFAELEQAV 280
>gi|206890450|ref|YP_002248654.1| lateral flagellar motor protein MotA [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742388|gb|ACI21445.1| lateral flagellar motor protein MotA [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 288
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 163/283 (57%), Gaps = 5/283 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV- 59
M +IG + + I+GG+ GN +L QP E++I+ GA +G V+A+P V++ GV
Sbjct: 1 MLVVIGGLVVLGSIVGGYLLEKGNLSVLFQPAEVLIIFGAAIGALVIASPPHVLR--GVI 58
Query: 60 --SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
++ I G K + Y D L LL L ++K E +++P NSTIF+ P L
Sbjct: 59 KGTITTITGAKGYSKRDYMDTLLLLSELFTKIRKEGLISIEQDVEEPENSTIFSKYPKFL 118
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+N+ + D +R ++ YE+E+++D EI+ + + P + + +SLP +GI
Sbjct: 119 KNHHAMALLTDTLRTVMTTTVSPYELESILDSEIETLHETESGPVRNLLTIADSLPGLGI 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
V A+LG++ MG + + P+++G ++G +L GT +G+++ Y PL +++++ +
Sbjct: 179 VAAVLGVVLTMGKMKEPPEVIGHSVGAALVGTFMGVLMCYGFVGPLAKRLEASVNHEKEY 238
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
I+K AL+A+++G+ PQ+A+E+ R+ +P RP+ + +E+
Sbjct: 239 LQIIKAALVAFVSGSAPQIAVEFARRTIPPHLRPTFHELEEEI 281
>gi|260432133|ref|ZP_05786104.1| lateral flagellar motor protein MotA [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415961|gb|EEX09220.1| lateral flagellar motor protein MotA [Silicibacter lacuscaerulensis
ITI-1157]
Length = 289
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 159/273 (58%), Gaps = 3/273 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ A GG I+++ PFE++++ GA +G F+++N + +K +
Sbjct: 1 MIGILGIVVIFVMVFGGYLAAGGKMAIILKSLPFEMMMIGGAAVGAFLISNDMPAVKHTV 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F D Y D+L LL+ L+ + + + E E HI+DP +S++F + P +
Sbjct: 61 KDLGKVFKGPKWKPDDYRDLLCLLFALI-RMARSNPVEVEGHIEDPASSSLFAAYPKIQA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ ++ + + HA+ + + LPA+GIV
Sbjct: 120 DKEAVDLICDTMRSAAMNYDDPHQVEEVLEKRMEANFHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y L P ++K+ + + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAGKLKAVVEEDNHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
++K+ L+A ++ P + IE GR+ P RP
Sbjct: 240 QLIKEVLVANLHQHNPAMCIEVGRQNTPTHNRP 272
>gi|26991583|ref|NP_747008.1| flagellar motor protein MotA [Pseudomonas putida KT2440]
gi|148549983|ref|YP_001270085.1| flagellar motor protein MotA [Pseudomonas putida F1]
gi|24986671|gb|AAN70472.1|AE016688_11 motility protein, MotA family [Pseudomonas putida KT2440]
gi|148514041|gb|ABQ80901.1| Flagellar motor component-like protein [Pseudomonas putida F1]
gi|313500884|gb|ADR62250.1| Flagellar motor protein MotA [Pseudomonas putida BIRD-1]
Length = 283
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 156/285 (54%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP + VIK
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTMHVIKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S +++FG + Y +VL L+Y ++ ++ E I+D S IF PTV
Sbjct: 61 S----MKMFGSR-FSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L + +T F+CDY+R++ GN +E+E L D E+ + E P HA++ + + +P G
Sbjct: 116 LADERMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L + +G +G +L GT GI+ +Y PL ++ ++
Sbjct: 176 IVAAVLGIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
LY +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NLYESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAV 280
>gi|254497975|ref|ZP_05110738.1| flagellar motor protein MotA [Legionella drancourtii LLAP12]
gi|254352752|gb|EET11524.1| flagellar motor protein MotA [Legionella drancourtii LLAP12]
Length = 300
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + +LC+ GGF GG+ + QP E++I+ GA +G ++ N L V+K G +
Sbjct: 1 MLIIIGYIVVLLCVFGGFALGGGHLAAIFQPVELLIIGGAAVGSLIVGNSLSVLKALGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++F + + TY +L LLY L+ ++ E+ I++P +S IFT+ P+++ +
Sbjct: 61 IPKVFRSEKTSKATYISLLGLLYNLLNKARQQGMMSIESDIEEPESSPIFTNYPSLMSEH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FICDY R+II N + +++E LMD EI+ E+L P + I+ + +++PA GIV A
Sbjct: 121 HIIEFICDYFRLIITSNMQPFQLEALMDMEIESHHEEELIPANTITKVADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPAELGILIAHALVGTFLGILIGYGFIGPIATAMEQRANQTQLMLQS 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K ++A ++ P +A+E+GRKVL ++RPS + E+ + AS
Sbjct: 241 IKATILASLHNNPPLIAVEFGRKVLFSAQRPSFTQLNDEIKNVKQAEPAS 290
>gi|220934495|ref|YP_002513394.1| putative chemotaxis (motility protein A) transmembrane
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995805|gb|ACL72407.1| putative chemotaxis (motility protein A) transmembrane
[Thioalkalivibrio sp. HL-EbGR7]
Length = 285
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 163/280 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ I+G I + ++GGF A GG + QPFE+VI+ GA LG F+++N +K I
Sbjct: 1 MNLILGAIIVTVSVLGGFMAHGGKLLAIWQPFEVVIICGAALGAFIISNSMKTIMKVFKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + G + Y D+L LLY L +K E I++P S IF P++L+++
Sbjct: 61 IPGLLGGPKYKKTHYLDLLALLYDLFTKARKEGLMGIEPDIEEPQESAIFQKYPSILKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DYMR+++ G+ +E++NLMD E++ +E +P HA+ + ++LPA GIV A
Sbjct: 121 HVVEFISDYMRLVVSGSMNPFELDNLMDIELETHHHEVGEPAHAVQRVADALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M +L + +G + +L GT LGI+L+Y P+++ ++ + + Y
Sbjct: 181 VLGIVNTMDSLGGPIEEIGGKVAAALVGTFLGILLAYGFVGPMSTALERRAEDEAKFYAC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K ++A + G PQVA+E+GRK + + RPS + + Q +
Sbjct: 241 LKACILANVQGYSPQVAVEFGRKTMASTLRPSFQELEQHL 280
>gi|303248926|ref|ZP_07335173.1| chemotaxis protein MotA [Desulfovibrio fructosovorans JJ]
gi|302489649|gb|EFL49585.1| chemotaxis protein MotA [Desulfovibrio fructosovorans JJ]
Length = 288
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 165/289 (57%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ I I CI+ GF GN +L+ P E++++ G LG V++ P V+ +
Sbjct: 1 MFAIIGILIVIGCILAGFILEKGNFDLLLSAAPPEMLMIGGGALGQLVLSAPKDVLGATF 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L IFG + Y ++L L L +++ E ++ P S IF++ +
Sbjct: 61 KGALSIFGGMTTSKAYYLELLTTLSGLYMKIRREGLVAIEKDVERPAESPIFSNFAKNKK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N+E+ TFICD MR+ N ++E E++MD +I+ ++E+L P HAIS ++LP +GIV
Sbjct: 121 NHEVLTFICDTMRIFSTVNIEAHEFESIMDADIEATVHEELVPSHAISKTADALPGLGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LG++ MG +++ ++LG +IG +L GT LG++++Y P+ + I+ + +
Sbjct: 181 ACVLGVVLTMGKINEPAEVLGHSIGAALVGTFLGVLMAYGFVAPIATNIEHRAKETEAIL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+ K +L A++ G P VA+E GR+ +P+ +RP+ E + +E ++ + K
Sbjct: 241 LTAKASLTAFVGGNPPPVALEAGRRAIPIHKRPTFEEL-EEAIKISKGK 288
>gi|312958641|ref|ZP_07773161.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
gi|311287184|gb|EFQ65745.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
Length = 283
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G LIQPFE++I+ GA LG F+ ANP + VIK
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVIKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L +FG + Y +VL L+Y ++ ++ E I+D S IF P V
Sbjct: 61 S----LSMFGSR-FTHTFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPAV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + E P HA++ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELFSLKEELEHPSHAVTGVADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L + + +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEI 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
LY +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NLYESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAV 280
>gi|283834437|ref|ZP_06354178.1| chemotaxis MotA protein [Citrobacter youngae ATCC 29220]
gi|291069984|gb|EFE08093.1| chemotaxis MotA protein [Citrobacter youngae ATCC 29220]
Length = 287
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 148/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I GL + + C+ GG++ GG + QP EI+I+ GAGLG ++ NP+ V+K+
Sbjct: 1 MQKIFGLLVVLGCVFGGYFEAGGQLIAIWQPAEIIIIVGAGLGAMIIGNPVHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K +G + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKKMGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A G +A++ GRK+L L+ +P+
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPT 272
>gi|325271246|ref|ZP_08137791.1| flagellar motor protein MotA [Pseudomonas sp. TJI-51]
gi|324103649|gb|EGC00951.1| flagellar motor protein MotA [Pseudomonas sp. TJI-51]
Length = 283
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 156/285 (54%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP + VIK
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGYMTMHVIKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S +++FG + Y +VL L+Y ++ ++ E I+D S IF PTV
Sbjct: 61 S----MKMFGSR-FSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L + +T F+CDY+R++ GN +E+E L D E+ + E P HA++ + + +P G
Sbjct: 116 LADERMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L + +G +G +L GT GI+ +Y PL ++ ++
Sbjct: 176 IVAAVLGIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
LY +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NLYESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAV 280
>gi|254463720|ref|ZP_05077131.1| chemotaxis protein MotA [Rhodobacterales bacterium Y4I]
gi|206684628|gb|EDZ45110.1| chemotaxis protein MotA [Rhodobacterales bacterium Y4I]
Length = 289
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 156/273 (57%), Gaps = 3/273 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + GG+ GG I+++ PFE++++ GA +G F++AN + +K +
Sbjct: 1 MIGIVGIVVIFAMVFGGYLLAGGKMAIILKSLPFEMMMIGGAAVGAFLIANDMGGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F D Y D+L LL+ L+ + + + E E HI+DP NS++F P +L
Sbjct: 61 KDIGKVFKGPKWKPDDYRDLLCLLFALI-RIARANPVEVEQHIEDPENSSVFNKYPKILG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ ++ L+ L HA+ M + LPA+GIV
Sbjct: 120 DKEAVNLICDTMRSASMNYDDPHQVEEVLEKRMEANLHHALHSSHALQTMADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ LSY L P ++K+ + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLSYGLVAPFAGKVKAVVEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
++++ L+A ++ + IE GR+ P RP
Sbjct: 240 QLIREVLVANLHNHAAAICIEVGRQNTPSHFRP 272
>gi|254418967|ref|ZP_05032691.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
gi|196185144|gb|EDX80120.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
Length = 288
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 165/276 (59%), Gaps = 4/276 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI---QPFEIVIVAGAGLGGFVMANPLKVIKDS 57
M IIG+ + + ++ G YA+ G + +I P E++ + GAG+ F+++N + V+K S
Sbjct: 1 MFQIIGI-VLLFGLVFGSYAISGGKFEVIMHAAPHELMAIGGAGIAAFLISNSMTVVKGS 59
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
L + F + Y D+L LL+ L +K E+HI+ P STIF P VL
Sbjct: 60 LAGLGKAFAGPKWKKQDYKDLLSLLFQLTKTMKSKGVVALESHIEKPKESTIFQKYPKVL 119
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+++ FICD +RM+ + +++E+ M+++++ +E L HA+ ++ ++LPA+GI
Sbjct: 120 KDHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEHLDNAHALQNLADALPALGI 179
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
V A+LG+IK MG++++ P++LG IG +L GT +G+ L+Y L P +++ S ++
Sbjct: 180 VAAVLGVIKTMGSITEPPEVLGGMIGGALVGTFMGVFLAYGLVGPFAARLTSIINEEAAY 239
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
Y +++ LIA+++G Q+++E GR +P + +PS
Sbjct: 240 YKMIQSVLIAHLHGNAAQISVEIGRGDIPSASQPSF 275
>gi|229588063|ref|YP_002870182.1| flagellar motor protein MotA [Pseudomonas fluorescens SBW25]
gi|229359929|emb|CAY46783.1| chemotaxis MotA protein [Pseudomonas fluorescens SBW25]
Length = 283
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + I ++GG+ G LIQPFE++I+ GA G F+ ANP + V+K
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGYMTMHVVKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L +FG + Y +VL L+Y ++ ++ E I+D S IF P V
Sbjct: 61 S----LGMFGSR-FTHTFYLEVLGLVYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + E P HA++ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELFSLKEELEHPSHAVTGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L + + +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEI 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
LY +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NLYESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAV 280
>gi|163738050|ref|ZP_02145466.1| chemotaxis protein MotA [Phaeobacter gallaeciensis BS107]
gi|163742554|ref|ZP_02149940.1| flagellar motor protein MotA [Phaeobacter gallaeciensis 2.10]
gi|161384139|gb|EDQ08522.1| flagellar motor protein MotA [Phaeobacter gallaeciensis 2.10]
gi|161388666|gb|EDQ13019.1| chemotaxis protein MotA [Phaeobacter gallaeciensis BS107]
Length = 289
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 156/273 (57%), Gaps = 3/273 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ GG I+I+ PFE +++ GAG+G F+++N + +K +
Sbjct: 1 MLGIVGIVVIFVMVFGGYLLAGGKFAIIIKALPFEFMMIGGAGVGAFLISNDMGGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F D Y D+L LL+ L+ + + + E E HI+DP NS++F P +L
Sbjct: 61 KDLGKVFKGPKWKPDDYRDLLCLLFSLI-RIARANPVEVEQHIEDPENSSVFNRYPKILA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E I D MR + +++E ++++ I+ L+ L HA+ + + LPA+GIV
Sbjct: 120 DKEAVNLISDTMRSASMNYDDPHQVEEVLEKRIEANLHHALHSSHALQSLADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++ Q P++LG IG +L GT LG+ L+Y L P ++KS + Y
Sbjct: 180 AAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAGKVKSVVEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
++++ L+A ++ + IE GR+ P RP
Sbjct: 240 SLIREVLVANLHNHAAAICIEVGRQNTPSHIRP 272
>gi|197106584|ref|YP_002131961.1| chemotaxis MotA protein [Phenylobacterium zucineum HLK1]
gi|196480004|gb|ACG79532.1| chemotaxis MotA protein [Phenylobacterium zucineum HLK1]
Length = 289
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 167/274 (60%), Gaps = 2/274 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G + GGN +++ P E++ + GAG+ F++AN L VIK +
Sbjct: 1 MFQIIGIVLLFALVFGSYIISGGNMGVILHALPHEMMAIGGAGVASFLIANSLPVIKATV 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++FG Y D+L LL++L +K E+HI++P STIFT P +++
Sbjct: 61 GNFGKVFGGPKWKAADYRDLLSLLFLLTKTMKSKGVIALESHIENPTESTIFTRFPKIMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E +P HA+ + ++LPA+GIV
Sbjct: 121 DHFAIDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEAQQPSHALQTLADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P++LG IG +L GT LG+ L+Y L P+ ++++ ++ Y
Sbjct: 181 AAVLGVIKTMGSITEPPEVLGGMIGSALVGTFLGVFLAYGLVGPMATRMREVIDEEGSFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
I++ L+A+++G Q+++E GR +P +PS
Sbjct: 241 RIIQSVLVAHLHGNAAQISVEIGRGSVPSGAQPS 274
>gi|254295278|ref|YP_003061301.1| flagellar motor protein MotA [Hirschia baltica ATCC 49814]
gi|254043809|gb|ACT60604.1| chemotaxis MotA protein [Hirschia baltica ATCC 49814]
Length = 288
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 166/276 (60%), Gaps = 4/276 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDS- 57
M IIGL + + GGF GG+ ++I+ PFE++++ GAG+G F+++N + IK +
Sbjct: 1 MFQIIGLLVVFGMVFGGFALAGGHFDVIIKAAPFEMMMIGGAGVGSFLISNSMGTIKGAM 60
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
G + G K +D Y D+L LL++L +K E HI++P +S+IF + P +L
Sbjct: 61 GGFGKALSGPKWKAKD-YQDLLTLLFVLTKTMKTKGVVAIEPHIENPKDSSIFQNYPKIL 119
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+++ ICD +RM+ + +++E+ ++++I+ E HA+ ++ ++ PA+GI
Sbjct: 120 KDHFACDLICDTLRMMTMNMDDPHQVEDAIEKQIEKHHSEAHGAAHAVQNLADAFPALGI 179
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
V A+LGIIK MG +SQ P+ LG IG +L GT LGI ++Y + P +++ ++ +
Sbjct: 180 VAAVLGIIKTMGAISQPPEYLGKLIGSALVGTFLGIFIAYGIVGPFAARMGEVLDEEGQF 239
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
Y I+K L+++++G Q+++E GR +P S +PS
Sbjct: 240 YKIIKDVLVSHLHGNAAQISVELGRGSVPTSCQPSF 275
>gi|331645435|ref|ZP_08346539.1| chemotaxis MotA protein [Escherichia coli M605]
gi|323191389|gb|EFZ76651.1| chemotaxis protein lafT [Escherichia coli RN587/1]
gi|331045597|gb|EGI17723.1| chemotaxis MotA protein [Escherichia coli M605]
Length = 287
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 147/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP EIVI+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLIAIWQPAEIVIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A G +A++ GRK+L L+ +P+
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPT 272
>gi|170723855|ref|YP_001751543.1| flagellar motor protein MotA [Pseudomonas putida W619]
gi|169761858|gb|ACA75174.1| flagellar motor MotA protein [Pseudomonas putida W619]
Length = 283
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP + VIK
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFMQANPGYMTMHVIKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E+ I+D S IF P V
Sbjct: 61 S----LKMFGTR-FTHTFYLEVLGLVYEILNKSRREGMMAIESDIEDAAASPIFAKYPAV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L + +T FICDY+R++ GN +E+E L D E+ + E P HA++ + + +P G
Sbjct: 116 LGDERMTAFICDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVNGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L + + +G +G +L GT GI+ +Y PL ++ ++
Sbjct: 176 IVAAVLGIVVTMASLGEGDQASIGLHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
LY +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NLYESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAV 280
>gi|226944521|ref|YP_002799594.1| Fagellar motor protein [Azotobacter vinelandii DJ]
gi|226719448|gb|ACO78619.1| Fagellar motor protein [Azotobacter vinelandii DJ]
Length = 291
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 165/290 (56%), Gaps = 4/290 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +GL + +L + GG+ GG+ L QP E++I+ GA LG F+ AN K+IK + +
Sbjct: 1 MLIALGLIVVMLSVFGGYALSGGSLGPLYQPLELLIIGGAALGAFIAANNGKIIKATLGA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + Y +++ LLY L+ ++ E I++P S +F P V+++
Sbjct: 61 FSRLRRTNSYDKALYLELMSLLYNLLSKARREGMLAIEKEIENPAESALFGECPKVVQDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ TF+ DY+R++I GN ++E++ LM EI+ +E P A++ + ++LPA GIV A
Sbjct: 121 MIVTFLTDYLRLMISGNMAAHELDELMVHEIEEFEHEAHLPVDALTKVSDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++KA+ P +G I +L GT LGI+L+Y + P S+I + ++
Sbjct: 181 VMGVVKALSMADAGPDEMGLMIAHALVGTFLGILLAYGVVAPAASRIDRQVGEAVKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
++ L+A +NG PQ+A+E+GRK L +ERPS A E+ ++ N K +
Sbjct: 241 MRVTLLASLNGYAPQLAVEFGRKALHSAERPS----AGELEEHVRNGKGA 286
>gi|300936145|ref|ZP_07151084.1| flagellar motor protein MotA [Escherichia coli MS 21-1]
gi|300458723|gb|EFK22216.1| flagellar motor protein MotA [Escherichia coli MS 21-1]
Length = 287
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 147/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP EIVI+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEIVIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P ST+F P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTVFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A G +A++ GRK+L L+ +P+
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPT 272
>gi|237798268|ref|ZP_04586729.1| flagellar motor protein MotA [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331021120|gb|EGI01177.1| flagellar motor protein MotA [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 283
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 158/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + I I+GG+ G L QP+E++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVIASILGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IFT P V
Sbjct: 61 S----LKMFGSR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFTKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + E P HA++ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAVTGVADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEM 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NVYESIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 280
>gi|114797426|ref|YP_758984.1| flagellar motor protein MotA [Hyphomonas neptunium ATCC 15444]
gi|114737600|gb|ABI75725.1| putative chemotaxis MotA protein [Hyphomonas neptunium ATCC 15444]
Length = 288
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 168/282 (59%), Gaps = 3/282 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ I+GL +T++ + GG+ GG I++ PFE++++ GA G F+ +N +K +G
Sbjct: 1 MNAILGLVVTMVMVFGGYMLAGGKLGIILHSLPFEMMMIGGAATGAFLASNDFGTVKHTG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F ++ Y D+L L++ L++ LK+ + E HI+ P S++F P +L+
Sbjct: 61 GDVAAAFTGPKWKKNDYQDLLLLMHELLHILKQNPVD-IEPHIEAPNESSVFMKYPRILK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD +R +I+ +++E L+D+ ++ +L EKL HA+ M ++LPA+GIV
Sbjct: 120 DHEAIEMICDTIRSMIMNFDNVHQVEELLDKHLESLLEEKLHGSHALQQMADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ + P++LG IG +L GT LG+ L+Y + P +++K+ R ++H Y
Sbjct: 180 AAVLGVIKTMASIDKPPEVLGGMIGGALVGTFLGVFLAYGVVGPFAARVKTIRSEEHLFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ + L++ ++ + +E R+ P RPS + V Q V
Sbjct: 240 SMIGQVLVSNLHKNPVNICVEVARRQAPARVRPSFDEVEQAV 281
>gi|77456740|ref|YP_346245.1| flagellar motor protein MotA [Pseudomonas fluorescens Pf0-1]
gi|77380743|gb|ABA72256.1| chemotaxis MotA protein [Pseudomonas fluorescens Pf0-1]
Length = 283
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G LIQPFE++I+ GA LG F+ ANP + V+K
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVLKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L +F + Y +VL L+Y ++ ++ E I+D S IF P V
Sbjct: 61 S----LSMFSSR-FSHTFYLEVLGLIYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T FICDY+R++ GN +E+E L D E+ + + P HA++ + +++P G
Sbjct: 116 LKDERMTAFICDYLRIMSSGNMAPHELEGLFDMELYSLKEDLEHPSHAVNGIADAMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L + K +G +G +L GT GI+ +Y PL + ++
Sbjct: 176 IVAAVLGIVVTMASLGEGDQKSIGLHVGAALVGTFFGILAAYGFFGPLAHSLAHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL + RPS + Q V
Sbjct: 236 NVYEAIKASLVASASGMPPSLAVEFGRKVLYPAHRPSFAELEQAV 280
>gi|257094101|ref|YP_003167742.1| chemotaxis MotA protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257046625|gb|ACV35813.1| chemotaxis MotA protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 285
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 168/280 (60%), Gaps = 1/280 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G ++ IL G Y++ G+ L P E V + G +GGFV +N LK+IK + +
Sbjct: 1 MFLIVG-YVIILAAALGTYSVHGSLAALWVPLEYVAIVGLTIGGFVASNDLKIIKTTVGA 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L IF + Y D+L +L+ ++ ++K EN +++P +S IF+ P++ ++
Sbjct: 60 LPGIFKGSKFTKVLYVDLLAMLFEVLAKVRKEGLMSIENDVENPQDSPIFSKYPSLAGDH 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+RM++ GN + EIENLMD EI+ +E P H +S + +++PA GIV A
Sbjct: 120 HVMEFITDYLRMMVGGNLNAIEIENLMDIEIETHHHEVETPGHVVSKVADAVPAFGIVVA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ + P +LG IG +L GT LGI+++Y +P+ S ++ ++Y +
Sbjct: 180 VMGVVNVMGSVGEPPAVLGKMIGGALVGTFLGILIAYGFVSPVASLLEQKAQDGTKIYQV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K L+A M+G PQVA+E+GRK L RP+ + +E+
Sbjct: 240 IKVVLLASMSGYAPQVAVEFGRKTLVSGLRPTFRELEEEL 279
>gi|59889799|emb|CAH19155.1| Lateral flagellar motor protein A (MotA-like) [Escherichia coli]
gi|284920063|emb|CBG33120.1| lateral flagellar motor protein A (MotA-like) [Escherichia coli
042]
Length = 287
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 147/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIIWGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A G +A++ GRK+L L+ +P+
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPT 272
>gi|46204687|ref|ZP_00049615.2| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 168
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 112/152 (73%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FICDY R+I++GNARS+EIE LM+EEI LKPY AI+ + E+LPA+GIV A+LGI
Sbjct: 3 FICDYCRLILIGNARSHEIEALMEEEIGTHKKSVLKPYGAINTVAEALPALGIVAAVLGI 62
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+KAMG L QSP+ILG IG +L GT G+ SY + PL ++K R KQ Y I+K+
Sbjct: 63 VKAMGALDQSPQILGGLIGAALVGTFFGVFASYGVLAPLAIKVKGVREKQCAPYTIIKQT 122
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
LIAYMNGA+PQVAIE+GRK + ++RP+I+ V
Sbjct: 123 LIAYMNGALPQVAIEHGRKGIAGADRPTIDEV 154
>gi|170021343|ref|YP_001726297.1| flagellar motor protein MotA [Escherichia coli ATCC 8739]
gi|188495414|ref|ZP_03002684.1| chemotaxis protein LafT [Escherichia coli 53638]
gi|218703544|ref|YP_002411063.1| flagellar motor protein MotA [Escherichia coli UMN026]
gi|256020245|ref|ZP_05434110.1| flagellar motor protein MotA [Shigella sp. D9]
gi|260853483|ref|YP_003227374.1| putative lateral flagellar motor protein [Escherichia coli O26:H11
str. 11368]
gi|293403375|ref|ZP_06647466.1| flagellar motor protein MotA [Escherichia coli FVEC1412]
gi|293408385|ref|ZP_06652224.1| conserved hypothetical protein [Escherichia coli B354]
gi|298378987|ref|ZP_06988868.1| flagellar motor protein MotA [Escherichia coli FVEC1302]
gi|300817252|ref|ZP_07097470.1| flagellar motor protein MotA [Escherichia coli MS 107-1]
gi|300899472|ref|ZP_07117720.1| flagellar motor protein MotA [Escherichia coli MS 198-1]
gi|307136894|ref|ZP_07496250.1| flagellar motor protein MotA [Escherichia coli H736]
gi|307313502|ref|ZP_07593123.1| MotA/TolQ/ExbB proton channel [Escherichia coli W]
gi|331640758|ref|ZP_08341893.1| chemotaxis MotA protein [Escherichia coli H736]
gi|331666563|ref|ZP_08367437.1| chemotaxis MotA protein [Escherichia coli TA271]
gi|331671821|ref|ZP_08372617.1| chemotaxis MotA protein [Escherichia coli TA280]
gi|332281407|ref|ZP_08393820.1| lateral flagellar motor protein A [Shigella sp. D9]
gi|169756271|gb|ACA78970.1| MotA/TolQ/ExbB proton channel [Escherichia coli ATCC 8739]
gi|188490613|gb|EDU65716.1| chemotaxis protein LafT [Escherichia coli 53638]
gi|218430641|emb|CAR11507.1| Chemotaxis protein lafT, Lateral flagellar motor protein A
(MotA-like) [Escherichia coli UMN026]
gi|257752132|dbj|BAI23634.1| predicted lateral flagellar motor protein [Escherichia coli O26:H11
str. 11368]
gi|291429228|gb|EFF02248.1| flagellar motor protein MotA [Escherichia coli FVEC1412]
gi|291471563|gb|EFF14046.1| conserved hypothetical protein [Escherichia coli B354]
gi|298280100|gb|EFI21604.1| flagellar motor protein MotA [Escherichia coli FVEC1302]
gi|300356951|gb|EFJ72821.1| flagellar motor protein MotA [Escherichia coli MS 198-1]
gi|300530228|gb|EFK51290.1| flagellar motor protein MotA [Escherichia coli MS 107-1]
gi|306906670|gb|EFN37181.1| MotA/TolQ/ExbB proton channel [Escherichia coli W]
gi|315059559|gb|ADT73886.1| proton conductor component of flagella motor [Escherichia coli W]
gi|315616808|gb|EFU97425.1| chemotaxis protein lafT [Escherichia coli 3431]
gi|323158086|gb|EFZ44185.1| chemotaxis protein lafT [Escherichia coli EPECa14]
gi|323171083|gb|EFZ56732.1| chemotaxis protein lafT [Escherichia coli LT-68]
gi|323181564|gb|EFZ66984.1| chemotaxis protein lafT [Escherichia coli 1357]
gi|323379882|gb|ADX52150.1| MotA/TolQ/ExbB proton channel [Escherichia coli KO11]
gi|331037556|gb|EGI09776.1| chemotaxis MotA protein [Escherichia coli H736]
gi|331065787|gb|EGI37671.1| chemotaxis MotA protein [Escherichia coli TA271]
gi|331070810|gb|EGI42169.1| chemotaxis MotA protein [Escherichia coli TA280]
gi|332103759|gb|EGJ07105.1| lateral flagellar motor protein A [Shigella sp. D9]
Length = 287
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 147/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A G +A++ GRK+L L+ +P+
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPT 272
>gi|126738568|ref|ZP_01754273.1| flagellar motor protein MotA [Roseobacter sp. SK209-2-6]
gi|126720367|gb|EBA17073.1| flagellar motor protein MotA [Roseobacter sp. SK209-2-6]
Length = 289
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 156/273 (57%), Gaps = 3/273 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ I + + GG+ GG I+++ PFE++++ GA +G F++ N +K +
Sbjct: 1 MIGIVGILIIFVMVFGGYLLAGGKMAIILKSLPFEMMMIGGAAVGAFLIGNDASGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F D Y D+L LL+ L+ + + + E E HI+DP NS++F P +L
Sbjct: 61 KDVGKVFKGPKWKSDDYRDLLCLLFSLI-RIARANPVEVEQHIEDPENSSVFNKYPKILG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD MR + +++E ++++ ++ L+ + HA+ M + LPA+GIV
Sbjct: 120 DSEAVNLICDTMRSASMNYDDPHQVEEVLEKRMEANLHHAMHSSHALQTMADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y L P ++K+ + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKMIGGALVGTFLGVFLAYGLVGPFAGKVKTITEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
++++ L+A ++ + IE GR+ P RP
Sbjct: 240 QLIREVLVANLHNHAAAICIEVGRQNTPSHIRP 272
>gi|32490781|ref|NP_871035.1| flagellar motor protein MotA [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25165987|dbj|BAC24178.1| motA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 296
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 158/280 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GGF G L QP E++I+ GAGLG F++ N K I + +
Sbjct: 1 MLIIVGYCVVFISVFGGFLLAEGQIGALFQPVELLIILGAGLGAFIVGNNGKAIFATIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++F ++ Y DV+ L+Y L+ ++ E ID P S IF+S P ++E++
Sbjct: 61 FPKLFHSSKYNKNMYMDVMTLMYRLLSKSRQSGLISLEKDIDFPKKSKIFSSYPALIEDD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY R+++ GN SYEIE LM+EEI+ E P ++ +G++LPA GIV A
Sbjct: 121 LIIDFIVDYFRLMVSGNLNSYEIEALMNEEIETCEQEHEVPITSLLQVGDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + LG I ++ GT LGI+L+Y PL + +K + ++
Sbjct: 181 VMGVVNALAAADRPAAELGELIAHAMVGTFLGILLAYGCVMPLGALLKQKSDEHIKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K L++ +NG PQ+AIE+GRK+L ERPS + + +
Sbjct: 241 IKITLLSSINGYAPQIAIEFGRKILYSPERPSFNELEEHI 280
>gi|15600147|ref|NP_253641.1| flagellar motor protein MotA [Pseudomonas aeruginosa PAO1]
gi|218894049|ref|YP_002442918.1| flagellar motor protein MotA [Pseudomonas aeruginosa LESB58]
gi|254238331|ref|ZP_04931654.1| chemotaxis protein MotA [Pseudomonas aeruginosa C3719]
gi|9951235|gb|AAG08339.1|AE004908_5 chemotaxis protein MotA [Pseudomonas aeruginosa PAO1]
gi|126170262|gb|EAZ55773.1| chemotaxis protein MotA [Pseudomonas aeruginosa C3719]
gi|218774277|emb|CAW30094.1| chemotaxis protein MotA [Pseudomonas aeruginosa LESB58]
Length = 283
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 160/285 (56%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
MS IIG+ + ++GGF GG +IQPFE++I+ GA LG F+ +NP + V+K
Sbjct: 1 MSKIIGIIVVFASVLGGFLLSGGKIGAIIQPFEVLIIGGAALGAFLQSNPGSTFMVVLKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+ ++F + Q Y +VL +LY ++ ++ E I+DP S IF+ P V
Sbjct: 61 AP----KMFSNR-FTQTYYLEVLGMLYEILNKSRREGMMAIEADIEDPAASPIFSKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP G
Sbjct: 116 LKDERMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M L + + +G + +L GT LGI+ +Y PL ++ ++
Sbjct: 176 IVAAVLGIVITMALLGEGSQAEIGHHVAAALVGTFLGILAAYGFVGPLAGALEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
L+ +K L+A +G P +A+E+GRKVL + RP+ + Q V
Sbjct: 236 NLFEAIKACLVASASGMPPSLAVEFGRKVLLPAHRPTFAELEQAV 280
>gi|116053103|ref|YP_793422.1| flagellar motor protein MotA [Pseudomonas aeruginosa UCBPP-PA14]
gi|254244158|ref|ZP_04937480.1| chemotaxis protein MotA [Pseudomonas aeruginosa 2192]
gi|296391794|ref|ZP_06881269.1| flagellar motor protein MotA [Pseudomonas aeruginosa PAb1]
gi|313109956|ref|ZP_07795883.1| chemotaxis protein MotA [Pseudomonas aeruginosa 39016]
gi|115588324|gb|ABJ14339.1| chemotaxis protein MotA [Pseudomonas aeruginosa UCBPP-PA14]
gi|126197536|gb|EAZ61599.1| chemotaxis protein MotA [Pseudomonas aeruginosa 2192]
gi|310882385|gb|EFQ40979.1| chemotaxis protein MotA [Pseudomonas aeruginosa 39016]
Length = 283
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 160/285 (56%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
MS IIG+ + ++GGF GG +IQPFE++I+ GA LG F+ ANP + V+K
Sbjct: 1 MSKIIGIIVVFASVLGGFLLSGGKIGAIIQPFEVLIIGGAALGAFLQANPGSTFMVVLKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+ ++F + Q Y +VL +LY ++ ++ E I+DP S IF+ P V
Sbjct: 61 AP----KMFSNR-FTQTYYLEVLGMLYEILNKSRREGMMAIEADIEDPAASPIFSKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP G
Sbjct: 116 LKDERMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M L + + +G + +L GT LGI+ +Y PL ++ ++
Sbjct: 176 IVAAVLGIVITMALLGEGSQAEIGHHVAAALVGTFLGILAAYGFVGPLAVALEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ +K L+A +G P +A+E+GRKVL + RP+ + Q V
Sbjct: 236 NMFEAIKACLVASASGMPPSLAVEFGRKVLLPAHRPTFAELEQAV 280
>gi|183598598|ref|ZP_02960091.1| hypothetical protein PROSTU_01996 [Providencia stuartii ATCC 25827]
gi|188020775|gb|EDU58815.1| hypothetical protein PROSTU_01996 [Providencia stuartii ATCC 25827]
Length = 295
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 163/292 (55%), Gaps = 2/292 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG I +IGG+ +GG+ L QP E VI+ GAG G FV+ N K I
Sbjct: 1 MLILIGYIIVTGTVIGGYLMLGGHLGALYQPAEFVIILGAGFGAFVVGNSGKSIIALCKV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + D++ LL+ L+ ++ E I++P S IF+ P VL++
Sbjct: 61 LPRVFRRSSYNKAMSMDLMALLFQLLNKSRQEGLLALEKDIENPQESEIFSQYPRVLKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ DY+R+++ N +S+EIE LMDEE++ E P ++ +G+S+PA GIV A
Sbjct: 121 TTLMFVVDYLRLMVTSNLQSHEIEALMDEELETFRQESEVPASGLNMVGDSMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ A+G+ + LG I ++ GT LGI+++Y PL + I+ +Q ++
Sbjct: 181 VLGVVNALGSADRPAGELGALIAHAMVGTFLGILVAYGFILPLAALIRLRTNEQLKMLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV--LQYNHNKKAS 290
+K ++ + G PQ+A+E+GRKVL ++RPS + +V ++ +H +A
Sbjct: 241 IKVTFLSALQGYAPQIAVEFGRKVLYSADRPSFMELEDKVREVKISHRSQAQ 292
>gi|78485776|ref|YP_391701.1| chemotaxis protein [Thiomicrospira crunogena XCL-2]
gi|78364062|gb|ABB42027.1| Flagellar motor protein MotA [Thiomicrospira crunogena XCL-2]
Length = 273
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 158/266 (59%), Gaps = 1/266 (0%)
Query: 17 GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC 76
G Y G+ ILIQP E++I+ G+ LG F++ANP V+K S L + ++ Y
Sbjct: 6 GGYLPHGSIGILIQPLEVLIICGSALGAFIIANPGWVVKKSFSGALGLAKPDPYNKEAYV 65
Query: 77 DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG 136
++L L++ + ++ E +++P++S +F + P V+ ++ FICDY+R++I G
Sbjct: 66 ELLGLMFRIFNKARREGLMAIEADVEEPHSSELFNASPKVVSDHHAVDFICDYLRLMISG 125
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
+ Y++E+LM E+DI +E P A+ + E+LP GIV A+LGII MG L P
Sbjct: 126 ASNPYQLEDLMILEMDIHHHEAAAPAEAVGKVAEALPGFGIVAAVLGIIVTMGYLDAGPL 185
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+ + V+L GT LGI+++Y + P++S + + + + +K L+A +NG PQ+
Sbjct: 186 EIAHHMSVALVGTFLGILVAYGVVGPISSDMANRAHNEGAYFGTIKTCLMANLNGYAPQI 245
Query: 257 AIEYGRKVLPLSERPSIEIVAQEVLQ 282
A+E+GRK +P SERPS + + +E LQ
Sbjct: 246 AVEFGRKSIPASERPSFQEL-EEFLQ 270
>gi|311279212|ref|YP_003941443.1| flagellar motor protein MotA [Enterobacter cloacae SCF1]
gi|308748407|gb|ADO48159.1| flagellar motor protein MotA [Enterobacter cloacae SCF1]
Length = 296
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 161/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYALTGGHLGALYQPAELIIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 LPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPTESEIFASYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG+ I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGSLIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|260866429|ref|YP_003232831.1| putative lateral flagellar motor protein [Escherichia coli O111:H-
str. 11128]
gi|257762785|dbj|BAI34280.1| predicted lateral flagellar motor protein [Escherichia coli O111:H-
str. 11128]
gi|323178475|gb|EFZ64053.1| chemotaxis protein lafT [Escherichia coli 1180]
Length = 287
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 146/272 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVFGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A G +A++ GRK+L L+ +P+
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPT 272
>gi|170681048|ref|YP_001742390.1| flagellar motor protein MotA [Escherichia coli SMS-3-5]
gi|306813286|ref|ZP_07447479.1| flagellar motor protein MotA [Escherichia coli NC101]
gi|170518766|gb|ACB16944.1| lateral flagellar motor protein A [Escherichia coli SMS-3-5]
gi|305854049|gb|EFM54488.1| flagellar motor protein MotA [Escherichia coli NC101]
Length = 287
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 147/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P ST+F P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTVFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A G +A++ GRK+L L+ +P+
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPT 272
>gi|302189800|ref|ZP_07266473.1| flagellar motor protein MotA [Pseudomonas syringae pv. syringae
642]
gi|330873803|gb|EGH07952.1| flagellar motor protein MotA [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 283
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IF P V
Sbjct: 61 S----LKMFGTR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + E P HAI+ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAITGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEM 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NVYESIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 280
>gi|56695126|ref|YP_165473.1| flagellar motor protein MotA [Ruegeria pomeroyi DSS-3]
gi|56676863|gb|AAV93529.1| chemotaxis protein MotA [Ruegeria pomeroyi DSS-3]
Length = 289
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 163/280 (58%), Gaps = 3/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ A GG I+++ PFE++++ GA G F+++N + +K +
Sbjct: 1 MIGILGIVVIFVMVFGGYLAAGGKMTIILKSLPFEMMMIGGAATGAFLISNDMGGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + Y D+L LL+ L+ + + + E E HI+DP +S +F+ P +
Sbjct: 61 KDVGKVFKGPKWKPEDYRDLLCLLFSLI-RIARQNPVEVEQHIEDPASSALFSKYPRIQA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD MR + +++E ++++ ++ L+ + HA+ + + LPA+GIV
Sbjct: 120 DHEAVDLICDTMRSASMNYDDPHQVEEVLEKRMEANLHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y L P S++K+ + + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGRLIGGALVGTFLGVFLAYGLVGPFASKVKAVVEEDNHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+++K+ L+A ++ P + IE GR+ P RP + Q
Sbjct: 240 LLIKEVLVANLHNHNPAMCIEVGRQNTPSHIRPGFTDLEQ 279
>gi|323976252|gb|EGB71345.1| chemotaxis protein MotA [Escherichia coli TW10509]
gi|327254573|gb|EGE66189.1| chemotaxis protein lafT [Escherichia coli STEC_7v]
Length = 287
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 147/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P +L
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLILTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A G +A++ GRK+L L+ +P+
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPT 272
>gi|330807220|ref|YP_004351682.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375328|gb|AEA66678.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 283
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 156/285 (54%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G LIQPFE++I+ GA LG F+ ANP + V+K
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVLKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L +F + Y +VL L+Y ++ ++ E I+D S IF P V
Sbjct: 61 S----LGMFSSR-FSHTFYLEVLGLIYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T FICDY+R++ GN +E+E L D E+ + + P HA++ + +++P G
Sbjct: 116 LKDARMTAFICDYLRIMSSGNMAPHELEGLFDMELYSLKEDLEHPSHAVTGIADAMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + ++
Sbjct: 176 IVAAVLGIVVTMASLGDGDQKSIGLHVGAALVGTFFGILAAYGFFGPLAHSLAHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL + RPS + Q V
Sbjct: 236 NVYEAIKASLVASASGMPPSLAVEFGRKVLYPAHRPSFAELEQAV 280
>gi|239905382|ref|YP_002952121.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239795246|dbj|BAH74235.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 284
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 158/275 (57%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + I C+ GGF GG+ +L QP E++I+ GA LG F +A+P + +
Sbjct: 1 MFAIIGIVVVIACVFGGFMLEGGHMGVLWQPIELLIIGGAALGSFFIASPKSIAIGTFKH 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F K Y D+L LL+ L+ ++ E H+ P S P + +N
Sbjct: 61 VMHVFTGKEPSAGDYQDLLTLLFELINIARRDGIVALEPHVSKPEQSATLNKYPAIAKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICD ++ ++ ++ ++LM +I + + + A++ + +SLP +GIV A
Sbjct: 121 QLAHFICDNIKCLLSEGIDAHRYDDLMRTDIATMHHHAMIAPGAVTKVADSLPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK-STRLKQHRLYI 239
+LGI+ MG +++ P++LG +IG +L GT LGI++SY P+ + ++ + +QH L+
Sbjct: 181 VLGIVLTMGKINEPPEVLGHSIGAALVGTFLGILMSYGFVGPMANNLEYQAKAQQHMLH- 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+VK+ L A+ +G P +++E GR+ +P RPS++
Sbjct: 240 VVKEVLAAFNSGFSPLLSVEMGRRAIPEDVRPSMD 274
>gi|289672565|ref|ZP_06493455.1| flagellar motor protein MotA [Pseudomonas syringae pv. syringae
FF5]
gi|330939853|gb|EGH43086.1| flagellar motor protein MotA [Pseudomonas syringae pv. pisi str.
1704B]
gi|330951463|gb|EGH51723.1| flagellar motor protein MotA [Pseudomonas syringae Cit 7]
gi|330978962|gb|EGH78021.1| flagellar motor protein MotA [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 283
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + + +IGG+ G L QP+E++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVLASVIGGYVLSHGKVMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IF P V
Sbjct: 61 S----LKMFGSR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + + P HAI+ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEDLEHPSHAITGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEM 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NVYEAIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 280
>gi|162147456|ref|YP_001601917.1| flagellar motor protein MotA [Gluconacetobacter diazotrophicus PAl
5]
gi|209545565|ref|YP_002277794.1| flagellar motor protein MotA [Gluconacetobacter diazotrophicus PAl
5]
gi|161786033|emb|CAP55615.1| putative chemotaxis protein motA (Motility protein A)
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533242|gb|ACI53179.1| putative chemotaxis protein MotA (motility protein A)
[Gluconacetobacter diazotrophicus PAl 5]
Length = 293
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 149/269 (55%), Gaps = 2/269 (0%)
Query: 6 GLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
GL +LC+ F A GG P I+ PFE++ + GA +G FVM N + +K L
Sbjct: 6 GLVFVLLCVFASFVASGGALAPLIMSMPFELLTILGAAVGIFVMGNSKEALKHVPGDLRL 65
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ + Y D+L LLY M + E HI++P++S IF P + ++
Sbjct: 66 VLAGPRHDKAAYLDLLVLLYRFMRLAQAKGDMALEEHIENPHDSAIFAMSPRIRDDKTTC 125
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
ICDY+R+ + +Y+++ +M E+ L E+L + + ++LPA+GIV A+LG
Sbjct: 126 NLICDYLRLTSLNIENAYQMDEVMSRELKKNLTEQLHTAKCLQSIADALPALGIVAAVLG 185
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IK M ++S+ P +LG IG +L GT LG++LSY + PL ++++ ++ R + +++
Sbjct: 186 VIKTMASISKPPAVLGAMIGGALVGTFLGVLLSYGVVAPLAARMRDVVMQDSRYHDLIRI 245
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
L+ ++ G+ PQV E GRK +P PS
Sbjct: 246 VLVTHLQGSPPQVCAEIGRKDIPHIFMPS 274
>gi|307546934|ref|YP_003899413.1| flagellar motor protein MotA [Halomonas elongata DSM 2581]
gi|307218958|emb|CBV44228.1| flagellar motor protein MotA [Halomonas elongata DSM 2581]
Length = 290
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 159/284 (55%), Gaps = 4/284 (1%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
IG I +L + GGF GG+ L QP E++++ GAG+G FV +N K +K S + +
Sbjct: 5 IGYLIVLLSVFGGFVLAGGSLGPLFQPTELLMIGGAGIGAFVASNNGKALKASFRIIPRL 64
Query: 65 FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
K + Y D++ L Y ++ +++ E ID+P S +F P +L + + T
Sbjct: 65 RRSKKYDKAMYLDLMALQYKILTKIRRDGMLGIERDIDNPQESPLFNEHPRLLADPMIMT 124
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ DY+R+++ G+ E++ LM EI+ E P AI +G+++PA GIV A++G+
Sbjct: 125 FLTDYLRLMVSGSMDPMELDELMLHEIEAFEQEAHIPIDAIGRIGDAMPAFGIVAAVMGV 184
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+KA+ ++ P+ +G I +L GT LGI++ Y PL S+I+ + ++ ++
Sbjct: 185 VKALSTVAAGPEQMGQMIAHALVGTFLGILIGYGFIIPLASRIERQAKEAEKMLHCIRVT 244
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
L+A ++G PQ+A+E+GRK L ++RPS E+ +Y K
Sbjct: 245 LLANLHGYAPQLAVEFGRKALHTADRPSF----TEMEEYMRQAK 284
>gi|87121903|ref|ZP_01077788.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86162701|gb|EAQ63981.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 278
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 152/278 (54%)
Query: 7 LFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFG 66
+ I I ++ G+ A G L QPFE++I+ G+ LG F++ANP + K L + F
Sbjct: 1 MIIVIASVVTGYMASHGEMMALWQPFEVLIICGSALGAFMVANPWHLQKRILKLLPQAFL 60
Query: 67 YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFI 126
+ Y ++ L+Y L + ++ E+HI+ PY S +F S P +L + E+ FI
Sbjct: 61 GSRHNERYYMGLMALMYTLFFRSRQEGFLAIEDHIEAPYESELFQSFPDLLRDQEMVEFI 120
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
D R+ I+ ++E E ++D EI+ I + + P HA++ + E+LP GIV A+LGI+
Sbjct: 121 TDNYRIFILTGLPAHEFEAIIDAEIEKIAEDLVAPGHAVNKVAEALPGFGIVAAVLGIVI 180
Query: 187 AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
MG++ + +G + +L GT LG+ +Y PL ++ + + Y VK +L+
Sbjct: 181 TMGSIGGPMEEIGYHVAAALVGTFLGVFFAYGFVGPLAGHLEGLGEHELKAYNAVKASLV 240
Query: 247 AYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+ ++G P A+E GRK+LP ERPS +A+ V Y
Sbjct: 241 STVSGFSPGAAVETGRKLLPSEERPSFAELAEYVRTYR 278
>gi|107104053|ref|ZP_01367971.1| hypothetical protein PaerPA_01005126 [Pseudomonas aeruginosa PACS2]
Length = 283
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 160/285 (56%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
MS IIG+ + ++GGF GG +IQPFE++I+ GA LG F+ +NP + V+K
Sbjct: 1 MSKIIGIIVVFASVLGGFLLSGGKIGAIIQPFEVLIIGGAALGAFLQSNPGSTFMVVLKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+ ++F + Q Y +VL +LY ++ ++ E I+DP S IF+ P V
Sbjct: 61 AP----KMFSNR-FTQTYYLEVLGMLYEILNKSRREGMMAIEADIEDPAASPIFSKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP G
Sbjct: 116 LKDERMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M L + + +G + +L GT LGI+ +Y PL ++ ++
Sbjct: 176 IVAAVLGIVITMALLGEGSQAEIGHHVAAALVGTFLGILAAYGFVGPLAVALEHDAKEEL 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ +K L+A +G P +A+E+GRKVL + RP+ + Q V
Sbjct: 236 NMFEAIKACLVASASGMPPSLAVEFGRKVLLPAHRPTFAELEQAV 280
>gi|66043828|ref|YP_233669.1| flagellar motor protein MotA [Pseudomonas syringae pv. syringae
B728a]
gi|63254535|gb|AAY35631.1| chemotaxis motA protein [Pseudomonas syringae pv. syringae B728a]
gi|330971542|gb|EGH71608.1| flagellar motor protein MotA [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 283
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + + +IGG+ G L QP+E++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVLASVIGGYVLSHGKVMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IF P V
Sbjct: 61 S----LKMFGTR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + + P HAI+ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEDLEHPSHAITGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEM 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NVYESIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 280
>gi|71736229|ref|YP_272856.1| flagellar motor protein MotA [Pseudomonas syringae pv. phaseolicola
1448A]
gi|257482422|ref|ZP_05636463.1| flagellar motor protein MotA [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289623745|ref|ZP_06456699.1| flagellar motor protein MotA [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648638|ref|ZP_06479981.1| flagellar motor protein MotA [Pseudomonas syringae pv. aesculi str.
2250]
gi|298484925|ref|ZP_07003024.1| Flagellar motor rotation protein motA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71556782|gb|AAZ35993.1| motility protein, MotA family [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298160612|gb|EFI01634.1| Flagellar motor rotation protein motA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320321895|gb|EFW77991.1| flagellar motor protein MotA [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331000|gb|EFW86974.1| flagellar motor protein MotA [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330865883|gb|EGH00592.1| flagellar motor protein MotA [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330886587|gb|EGH20248.1| flagellar motor protein MotA [Pseudomonas syringae pv. mori str.
301020]
gi|330965970|gb|EGH66230.1| flagellar motor protein MotA [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330984571|gb|EGH82674.1| flagellar motor protein MotA [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331009753|gb|EGH89809.1| flagellar motor protein MotA [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 283
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMTMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IF P V
Sbjct: 61 S----LKMFGSR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + E P HAI+ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAITGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATCLAHDAKEEM 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NVYESIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 280
>gi|94500540|ref|ZP_01307071.1| Flagellar motor component [Oceanobacter sp. RED65]
gi|94427330|gb|EAT12309.1| Flagellar motor component [Oceanobacter sp. RED65]
Length = 283
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 156/280 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG+ + I +I G+ G L QP+E +I+ G+G+G +++NP V KD
Sbjct: 1 MLFFIGMAVVICSVIFGYLGAHGVLLALWQPYEFIIILGSGIGAHIVSNPGGVHKDVFKM 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + + D L L+Y ++ +K E +++P +S IF+ P + +N+
Sbjct: 61 LPQVITGGKANKAMHMDCLSLIYDILNKSRKEGMMSIEADVENPQSSGIFSKYPAIQQNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY R+I GN +++E++ LMD EID ++E +P AI + +++P GIV A
Sbjct: 121 HLADFIADYFRLIAAGNMQAHELDALMDMEIDTRMHELSQPGSAIQKIADAMPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG + + +G I +L GT G++ Y P+ S+++ ++ +LY
Sbjct: 181 VLGIVITMGAIDGPMEEIGKHIAAALVGTFSGVLFGYGFFGPIASKMEHIAHEEIKLYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
K ++A +NG PQ+A+E+GRKVL +RP+ + +V
Sbjct: 241 AKATIVASVNGLPPQLAVEFGRKVLFAHDRPTFSELESKV 280
>gi|327394203|dbj|BAK11625.1| chemotaxis protein MotA [Pantoea ananatis AJ13355]
Length = 260
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 145/245 (59%)
Query: 36 IVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN 95
++AGAG+G F++ N K IK + +L +F + Y D++ LLY LM ++
Sbjct: 1 MIAGAGVGAFLVGNNGKSIKKTLKALPLLFRGSKYNKAVYMDLMALLYRLMAKSRQQGML 60
Query: 96 ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIIL 155
E I+DP S IF + P +L + +L FI DY+R+++ GN ++EIE LMDEEI+
Sbjct: 61 SLERDIEDPAQSEIFANYPRILADKQLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYE 120
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIIL 215
+E P +I+ +G+ LPA GIV A++G++ A+ + + LG + ++ GT LGI+L
Sbjct: 121 HECEVPAQSIAAVGDGLPAFGIVAAVMGVVHALASADRPAAELGALVAHAMVGTFLGILL 180
Query: 216 SYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+Y +PL S ++ + ++ VK L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 181 AYGFISPLASVLRQKCAETTKMMQCVKVTLLSSLNGYAPQIAVEFGRKTLYSAERPSFSE 240
Query: 276 VAQEV 280
+ + V
Sbjct: 241 LEEHV 245
>gi|28872067|ref|NP_794686.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213967913|ref|ZP_03396059.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|301384433|ref|ZP_07232851.1| flagellar motor protein MotA [Pseudomonas syringae pv. tomato
Max13]
gi|302062275|ref|ZP_07253816.1| flagellar motor protein MotA [Pseudomonas syringae pv. tomato K40]
gi|302132279|ref|ZP_07258269.1| flagellar motor protein MotA [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28855320|gb|AAO58381.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213927256|gb|EEB60805.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|331014599|gb|EGH94655.1| flagellar motor protein MotA [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 283
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IF P V
Sbjct: 61 S----LKMFGTR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + + P HAI+ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEDLEHPSHAITGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEM 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NVYESIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 280
>gi|212709469|ref|ZP_03317597.1| hypothetical protein PROVALCAL_00511 [Providencia alcalifaciens DSM
30120]
gi|212687807|gb|EEB47335.1| hypothetical protein PROVALCAL_00511 [Providencia alcalifaciens DSM
30120]
Length = 300
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 157/287 (54%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG I +IGG+ +GG+ L QP E VI+ GAGLG FV+ N K I L
Sbjct: 9 LIGYIIVTAAVIGGYVMVGGHLGALYQPAEFVIILGAGLGAFVVGNSGKAIVALCKVLPG 68
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + + D++ LL+ L+ ++ E I++P S IF P +L++
Sbjct: 69 LFRRSSYNKAMSMDLMALLFQLLNKSRQQGLLALEKDIENPQESEIFALYPRILKDKTAM 128
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI DY+R+++ N +++EIE LMDEE++ E P ++ +GES+PA GIV A+LG
Sbjct: 129 MFIVDYLRLMVTSNLQAHEIEALMDEELETFRQENEVPASGLNMVGESMPAFGIVAAVLG 188
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+ + LG I ++ GT LGI+++Y PL S I+ +Q ++ +K
Sbjct: 189 VVNALAAADRPAGELGALIAHAMVGTFLGILVAYGFILPLASLIRQRSSEQLKMMECIKV 248
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
++ + G PQ+A+E+GRKVL +RPS + +V + +A+
Sbjct: 249 TFLSSLQGYAPQIAVEFGRKVLFSVDRPSFMELEDKVREVKIGNRAT 295
>gi|326319082|ref|YP_004236754.1| flagellar motor stator protein MotA [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375918|gb|ADX48187.1| flagellar motor stator protein MotA [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 286
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 154/275 (56%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + + CI G F A GGN +++ PFEIV + G LG FV+ N KV+K +
Sbjct: 1 MFVIIGYIVCLGCIFGVFIAHGGNISVVLHALPFEIVTILGGALGAFVVNNQPKVLKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L F + Y +++ +LY ++ +K E ++ P+ S IF PTV
Sbjct: 61 KALPMAFKGSKYTKARYMELMAMLYEILQKARKEGLMAIEKDVEAPHESEIFKKYPTVGH 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN ++EIE+LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DHHVIEFTTDYLRMMVSGNLNAHEIESLMDSEIETHHQEAHAPVAALARLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y + PL ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPSVLGGMIGSALVGTFLGILLAYGVVEPLGGLVEQKLEDAAKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A M G P AIE+GRKVL +RPS
Sbjct: 241 QCIKTTLLASMQGYNPATAIEFGRKVLFSGDRPSF 275
>gi|146312114|ref|YP_001177188.1| flagellar motor protein MotA [Enterobacter sp. 638]
gi|145318990|gb|ABP61137.1| proton conductor component of motor, torque generator [Enterobacter
sp. 638]
Length = 295
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 159/273 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLIVLGYLVVLGTVFGGYMMTGGHLGALYQPAELIIIGGAGIGAFIVGNNGKSIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 LPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P A++ +G+SLPA GIV A
Sbjct: 121 MMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEVPAAALAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT +GI+L+Y +PL+S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFVGILLAYGFISPLSSVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 273
>gi|188592086|ref|YP_001796684.1| mota: chemotaxis protein; proton conductor component of motor,
torque generator [Cupriavidus taiwanensis LMG 19424]
gi|170938460|emb|CAP63447.1| MotA: chemotaxis protein; proton conductor component of motor,
torque generator [Cupriavidus taiwanensis LMG 19424]
Length = 287
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 155/256 (60%), Gaps = 1/256 (0%)
Query: 19 YAM-GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
YAM GG+ L QP E+VI+AGA +G F+ N K IK + +L +F ++ Y D
Sbjct: 18 YAMTGGHMGALYQPAEVVIIAGAAIGAFIATNTGKAIKATARALPGLFKSSKYKKELYLD 77
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
V+ LLY+L+ ++ E I DP S++F+ P +L + + F+ DY+RM++ GN
Sbjct: 78 VMSLLYVLLSKARREGILFLEKEIADPAASSVFSQYPRILSDPVVMEFLTDYLRMMVNGN 137
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
++EIE LMD EI+ +E P HA+S +G+ LPA GIV A++G++ A+G+ P
Sbjct: 138 MNAFEIEALMDHEIETFRHEAEIPAHALSRVGDGLPAFGIVAAVMGVVHALGSADLPPAE 197
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
LG I ++ GT LGI+L+Y +PL ++I+ + ++Y +K L+A +NG P VA
Sbjct: 198 LGALIAHAMVGTFLGILLAYGFISPLAARIELQVSENVKVYECIKVVLLASLNGYAPLVA 257
Query: 258 IEYGRKVLPLSERPSI 273
+E+GRKVL + RPS
Sbjct: 258 VEFGRKVLYSTVRPSF 273
>gi|120613044|ref|YP_972722.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120591508|gb|ABM34948.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
Length = 286
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 154/275 (56%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + + CI G F A GGN +++ PFEIV + G LG FV+ N KV+K +
Sbjct: 1 MFVIIGYLVCLGCIFGVFIAHGGNISVVLHALPFEIVTILGGALGAFVVNNQPKVLKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L F + Y +++ +LY ++ +K E ++ P+ S IF PTV
Sbjct: 61 KALPMAFKGSKYTKARYMELMAMLYEILQKARKEGLMAIEKDVEAPHESEIFKKYPTVGT 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN ++EIE+LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DHHVIEFTTDYLRMMVSGNLNAHEIESLMDSEIETHHQEAHAPVAALARLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y + PL ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPSVLGGMIGSALVGTFLGILLAYGVVEPLGGLVEQKLEDAAKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A M G P AIE+GRKVL +RPS
Sbjct: 241 QCIKTTLLASMQGYNPATAIEFGRKVLFSGDRPSF 275
>gi|261855635|ref|YP_003262918.1| flagellar motor protein MotA [Halothiobacillus neapolitanus c2]
gi|261836104|gb|ACX95871.1| flagellar motor protein MotA [Halothiobacillus neapolitanus c2]
Length = 283
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 151/274 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG + ++GGF GG+ +L+QP E +I+ GA L FV N K +K +
Sbjct: 1 MNVIIGWVLLFGAVLGGFALAGGHLIVLVQPVEYIIIIGAALAAFVAGNSGKTMKATMGG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ Y + L LLY + +K E I+DP NS +F P+VL ++
Sbjct: 61 FATALKGSKYKKALYMETLALLYHIFTRARKEGLMAIEEDIEDPQNSALFKEAPSVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI DY+R+++ ++I+NLMD +ID E P I+ + + LPA GIV A
Sbjct: 121 HALDFITDYLRLMVSSTLDVHQIDNLMDIDIDTHHQEASLPGTNIAKIADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++++ P +LG I +L GT LGI++SY L P+ + ++ + Y
Sbjct: 181 VLGVVHTMESVAEPPAVLGGLIAAALVGTFLGILVSYGLVAPVAANLEHKVNDSTKYYQS 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+K A+IA+MNG PQVA E+GRKVL S+RP +
Sbjct: 241 IKAAMIAFMNGYPPQVAAEFGRKVLFSSDRPGFQ 274
>gi|70734059|ref|YP_257699.1| flagellar motor protein MotA [Pseudomonas fluorescens Pf-5]
gi|68348358|gb|AAY95964.1| motility protein, MotA family [Pseudomonas fluorescens Pf-5]
Length = 309
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 154/285 (54%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP + V+K
Sbjct: 27 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGYMTMHVVKK 86
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L +F + Y +VL L+Y ++ ++ E I+D S IF P V
Sbjct: 87 S----LGMFSSR-FTHTFYLEVLGLIYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAV 141
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T F+CDY+R++ GN +E+E L D E+ + + P HA++ + + +P G
Sbjct: 142 LKDERMTAFVCDYLRIMSSGNMAPHELEGLFDMELFSLKEDLEHPSHAVNGIADGMPGFG 201
Query: 177 IVGAILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + ++
Sbjct: 202 IVAAVLGIVVTMASLGDGDQKSIGLHVGAALVGTFFGILAAYGFFGPLAHSLAHDAKEEL 261
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL + RPS + Q V
Sbjct: 262 NVYEAIKASLVASASGMPPSLAVEFGRKVLYPAHRPSFAELEQAV 306
>gi|89056675|ref|YP_512126.1| flagellar motor protein MotA [Jannaschia sp. CCS1]
gi|88866224|gb|ABD57101.1| chemotaxis protein MotA [Jannaschia sp. CCS1]
Length = 288
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 160/275 (58%), Gaps = 3/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + ++ + GG+ GG I+++ PFE +++ GA LG F+++N IK +
Sbjct: 1 MLGIVGIAVVLVMVFGGYALAGGKFGIILKALPFESMMIMGAALGAFLISNDKGSIKATI 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L+++F Y D+L LLY L+ L++ + E HI++P S IF P +L+
Sbjct: 61 SALIKVFKGPTWKDSDYRDLLCLLYELI-RLQRQNAVAVEEHIENPEGSEIFGRYPKILK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD MR + +++E ++D+ ++ ++ ++ HA+ + + LPA+GIV
Sbjct: 120 DHEAVELICDTMRSAAMNYNDPHQVEEVLDKRLEQNVHHQMHGSHAMQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P++LG IG +L GT LG+ L+Y P +++K+ + H+ Y
Sbjct: 180 AAVLGVIKTMASIDQPPEVLGGLIGGALVGTFLGVFLAYGFVGPFAAKMKTAIEEDHQFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+++++ LIA ++ + IE GR+ P RP
Sbjct: 240 LMIREVLIANLHSHATNICIEVGRQNAPHHVRPDF 274
>gi|283851001|ref|ZP_06368286.1| chemotaxis protein [Desulfovibrio sp. FW1012B]
gi|283573647|gb|EFC21622.1| chemotaxis protein [Desulfovibrio sp. FW1012B]
Length = 288
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 160/282 (56%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ I + CI+ GF GN +++ P E++++ G LG V+++P V+ +
Sbjct: 1 MFAILGVVIVLGCILAGFIMEKGNFDLILSAAPPELLMIGGGALGALVLSSPKDVLGATF 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L IFG + Y ++L L L +++ E ++ P S IF++ +
Sbjct: 61 KGALSIFGGMITSKAYYLELLTTLSGLYMKIRREGLVAIEKDVERPAESPIFSNFAKNKK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N+E+ TFICD MR+ N ++E E +MD +I+ ++E L P H+I+ + ++LP +GIV
Sbjct: 121 NHEVLTFICDTMRIFSTVNIEAHEFETIMDADIEATVHEALIPAHSIAKVADALPGLGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LG++ MG +++ ++LG +IG +L GT LG++ +Y P+ + I+ + +
Sbjct: 181 ACVLGVVLTMGKINEPAEVLGHSIGAALVGTFLGVLGAYGFVAPVATNIEYRAKETEAIL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ K +L A++ G P VA+E GR+ +P+ +RPS E + Q +
Sbjct: 241 LTAKASLTAFVGGNPPPVALEAGRRAIPIHKRPSFEELEQAI 282
>gi|330960100|gb|EGH60360.1| flagellar motor protein MotA [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 283
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 156/285 (54%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + ++GG+ G L QP+E++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMTMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IF P V
Sbjct: 61 S----LKMFGSR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + E P HA++ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVITMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATCLAHDAKEEM 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NVYESIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 280
>gi|283133064|dbj|BAI63830.1| flagellar motor protein MotA [Pseudomonas syringae pv. tabaci]
Length = 283
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 156/285 (54%), Gaps = 10/285 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG + ANP + V K
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGALLQANPGYMTMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IF P V
Sbjct: 61 S----LKMFGSR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + E P HAI+ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAITGIADGMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPK-ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
IV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + + ++
Sbjct: 176 IVAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATCLAHDAKEEM 235
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 236 NVYESIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 280
>gi|308273453|emb|CBX30055.1| Chemotaxis protein motA [uncultured Desulfobacterium sp.]
Length = 265
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 151/263 (57%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG ++IQP E +I+ GA +G +++ P K++KD ++ + + +Y D+LKL
Sbjct: 3 GGPLAVIIQPVEFMIIGGAAIGALLISAPPKLLKDIIGKIIGTVKGSTISKQSYLDLLKL 62
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
++ + +K E+HI++P S +FT P L N+ + FICD R++++G ++
Sbjct: 63 MFDVFQLSRKDGLIALESHIENPETSNLFTQYPQFLNNHHILHFICDTFRLVVLGGVAAH 122
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
++E LMD +I+ +E KP + +G+S+P +GIV A+LGI+ M + P+++G
Sbjct: 123 DMEALMDCDIETHHHEGTKPGMILQKIGDSMPGLGIVAAVLGIVITMQAIDGPPEVIGHK 182
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+ V+L GT LGI LSY P+ + I ++ +++ ++K +IA+ G P +A+E+
Sbjct: 183 VAVALVGTFLGIYLSYGFVQPIATNIDMANDEESKIFEVIKSGMIAFAKGLNPIIAVEFA 242
Query: 262 RKVLPLSERPSIEIVAQEVLQYN 284
R+ +P RP + + + V N
Sbjct: 243 RRSIPSDYRPEFQEMEKHVKGKN 265
>gi|152996654|ref|YP_001341489.1| flagellar motor component [Marinomonas sp. MWYL1]
gi|150837578|gb|ABR71554.1| flagellar motor component [Marinomonas sp. MWYL1]
Length = 284
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 143/267 (53%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
+ A GN L QPFEIVI+ GA LG F++ANP V K L ++ + Y
Sbjct: 18 YLASHGNLLALWQPFEIVIICGAALGAFMVANPFIVQKKVLTMLPQVISGSRHNKKFYLQ 77
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+L L+Y L ++ E+ I+ P+ S +F P V+ ++E+ F+ D R+ +
Sbjct: 78 LLGLMYCLFQKSRQEGFLSIEDDIESPFTSELFNRFPDVVRDHEVVNFLTDNYRIFTLTG 137
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+YEIE +MD EI+ I E + P HA+S + E LP GIV A+LGI+ MG++ +
Sbjct: 138 LPAYEIEAIMDNEIEQIQEELVAPSHALSRVAEGLPGFGIVAAVLGIVITMGSIGGPLEE 197
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+G + +L GT LGI Y P S ++S + + Y+ +K L + ++G P VA
Sbjct: 198 IGAHVAAALVGTFLGIFFGYGFVGPAASHLESLGAHELKAYLCIKACLNSIVSGYAPPVA 257
Query: 258 IEYGRKVLPLSERPSIEIVAQEVLQYN 284
+E GRK+LP RPS ++ + QY
Sbjct: 258 VETGRKLLPPEMRPSFIELSDGLKQYR 284
>gi|110677677|ref|YP_680684.1| flagellar motor protein MotA [Roseobacter denitrificans OCh 114]
gi|109453793|gb|ABG29998.1| chemotaxis MotA protein [Roseobacter denitrificans OCh 114]
Length = 289
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 152/275 (55%), Gaps = 3/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + GG+ A GG I+ + PFE+ ++ GA +G F+++N + IK +
Sbjct: 1 MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAVGAFLISNDMSAIKHTM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L +F + Y D+L LL+ L+ L + + E HI+ P S+IF+ +L+
Sbjct: 61 RDLGRVFKGPKWSHEDYKDLLCLLFELI-RLARQNPVAIEEHIEAPEESSIFSKYEKILK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD +R + +++E ++++ ++ ++ + HA+ + + LPA+GIV
Sbjct: 120 DKEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++ Q P++LG IG +L GT LG+ L+Y P +++KS + Y
Sbjct: 180 AAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFVGPFAAKVKSVTEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++++ L+A ++ + IE GR+ P RPS
Sbjct: 240 QLIREVLVANLHAHATNICIEVGRQNTPSHHRPSF 274
>gi|254511948|ref|ZP_05124015.1| chemotaxis protein MotA [Rhodobacteraceae bacterium KLH11]
gi|221535659|gb|EEE38647.1| chemotaxis protein MotA [Rhodobacteraceae bacterium KLH11]
Length = 289
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 158/273 (57%), Gaps = 3/273 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG+ + + GG+ A GG I+++ P+E++++ GA +G F+++N + +K +
Sbjct: 1 MIGLIGIAVIFAMVFGGYLAAGGKMAIIMKSLPYEMMMIGGAAVGAFMISNDMGGVKHTA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + Y D+L LL+ L+ + + + E E HI++P NS++F++ P +
Sbjct: 61 KDIGKVFKGPKWKPEDYRDLLCLLFSLI-RIARANPVEVEQHIEEPENSSLFSAYPKIQA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ ++ + + HA+ + + LPA+GIV
Sbjct: 120 DKEAVDLICDTMRSAAMNYDDPHQVEEVLEKRMEANFHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y L P ++K+ + + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAGKLKTVVEEDNHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
++K+ L+A ++ + IE GR+ P RP
Sbjct: 240 QLIKEVLVANLHNHNAAMCIEVGRQNTPTHNRP 272
>gi|116620374|ref|YP_822530.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
gi|116223536|gb|ABJ82245.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
Length = 305
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 156/274 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG+ + +IGGF GN Y+L+QP E++IV GA G ++ANP VI
Sbjct: 1 MHALIGIAVVFAAVIGGFLLERGNLYVLLQPAELLIVGGAAAGIVMVANPPAVIFRMWRG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F ++ L++LY + +++ E E+ ++DP S IF + P L +
Sbjct: 61 TLAAFRPPPHNPQSFLRYLRMLYEIFCYIQRAGVVEFESDVEDPKGSRIFANHPDFLNDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CD +RM++VG + E++ LM+ +I+ + +P +++ + ++LP +GIV A
Sbjct: 121 MTCAFVCDSLRMLVVGVTTASELDQLMELDIEAQQRGRQEPVNSLHAVADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M + +P+ +G + +L GT LGI+L Y + P+ +++++ + +L +
Sbjct: 181 VLGVVITMQAIGGAPEAVGQKVAAALVGTFLGILLCYGVVGPVAARLQTLGETESQLLHV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ A++A+ GA P +A EY R+ +P+ RPS +
Sbjct: 241 LRIAIVAFARGASPILAAEYARRSIPVDLRPSFQ 274
>gi|296282271|ref|ZP_06860269.1| flagellar motor protein MotA [Citromicrobium bathyomarinum JL354]
Length = 287
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 159/277 (57%), Gaps = 4/277 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ I ++ + GGF GG P + P+E++I+ GA +G + N L +K G
Sbjct: 1 MYAIIGIVILLVLVFGGFVISGGAMGPVLHALPYEMMIIGGAAVGATIAGNSLAHLKAIG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++IF + + D + L LM LK E+H+++P NSTIF++ P +++
Sbjct: 61 GAFMKIFKGPQHDKQDHIDAIALTTQLMKVLKTDGPVALESHVNEPENSTIFSAYPNLMK 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
N+ L + I D + +++V G ++ +E +MD + +E +P HA+ + ++LPA+G
Sbjct: 121 NHALISLISDTLTLLVVSSGTLETHAVEEVMDNAMKTHFHELHEPQHALQTLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K M ++ + P+ILG IG +L GT LG++L+Y + PL +++K + +
Sbjct: 181 IVAAVLGVVKTMSSIDKPPEILGEMIGSALVGTFLGVLLAYGMVGPLATRLKQVIEQDEQ 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ VK+ +IA + G + +E R L + RP +
Sbjct: 241 IFHAVKQVIIASLYGHPQPLVVESARSSLGHTVRPGL 277
>gi|295690962|ref|YP_003594655.1| MotA/TolQ/Exbb proton channel [Caulobacter segnis ATCC 21756]
gi|295432865|gb|ADG12037.1| MotA/TolQ/ExbB proton channel [Caulobacter segnis ATCC 21756]
Length = 288
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 166/285 (58%), Gaps = 4/285 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI---QPFEIVIVAGAGLGGFVMANPLKVIKDS 57
M IIG+ + + ++ G Y MGG +I P E++ + GAG+ F+++N + VIK +
Sbjct: 1 MFQIIGI-VLLFALVFGSYLMGGGKMDVILHAAPHELMAILGAGIAAFLISNSMTVIKAT 59
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+IF Y D+L LL++L +K E+HI+ P+ S IF P +
Sbjct: 60 AGGFGKIFAGPKWKASDYRDLLSLLFLLTKTMKSKGVIALESHIEKPHESKIFERYPKIT 119
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
++ FICD +RM+ + +++E+ M+++++ +E L+P HA+ M ++LPA+GI
Sbjct: 120 HDHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEALEPAHALQSMADALPALGI 179
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
V A+LG+IK MG++++ P +LG IG +L GT LG+ ++Y L P+ +++++ +
Sbjct: 180 VAAVLGVIKTMGSITEPPAVLGGMIGGALVGTFLGVFMAYGLVGPMAARLQAVVNEDAAF 239
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
Y I++ L+A+++G Q+++E GR +P +PS + + + Q
Sbjct: 240 YKIIQAVLVAHLHGNAAQISVEIGRGNVPSPAQPSFAELEEALSQ 284
>gi|302384262|ref|YP_003820085.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
gi|302194890|gb|ADL02462.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
Length = 289
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 165/275 (60%), Gaps = 4/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI---QPFEIVIVAGAGLGGFVMANPLKVIKDS 57
M IIGL + + ++ G YA+ G + +I P E++ + GA + F+++N + V+K S
Sbjct: 1 MFQIIGL-VLLFGMVFGSYAISGGKFDVITHAAPHELMAIGGAAVAAFLISNSIGVVKSS 59
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+ + F + Y D+L LL+ L +K E+HI+ P STIF P VL
Sbjct: 60 LGGIGKAFAGPKWKKQDYKDLLSLLFALTKTMKSKGVIALESHIEKPGESTIFQKYPKVL 119
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+++ T FICD +RM+ + ++IE+ M+++++ +E HA+ M ++LPA+GI
Sbjct: 120 KDHFATDFICDTLRMMTMNLEDPHQIEDAMEKQLEKHHHEAAAAPHALQGMADALPALGI 179
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
V A+LG+IK MG++++ P++LG IG +L GT +G+ L+Y + PL +++++ ++
Sbjct: 180 VAAVLGVIKTMGSITEPPEVLGGMIGGALVGTFMGVFLAYGIVGPLAARLQAIVDEEAAF 239
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
Y I++ L+A+++G Q+++E GR +P S +PS
Sbjct: 240 YKIIQSVLVAHLHGNAAQISVEIGRGDIPSSAQPS 274
>gi|121611335|ref|YP_999142.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121555975|gb|ABM60124.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 286
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 153/275 (55%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IG + + CI G + GGN ++++ P+E+VI+ G LG FV+ N KVIK +
Sbjct: 1 MYVCIGYLLCLGCIFGAYILHGGNIGVILKALPYELVIIGGGALGAFVVNNQGKVIKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ F ++ Y +++ +L+ L+ +++ + E +DDP S IF+ PTV
Sbjct: 61 RAIPSAFPASRYTKERYMELMAMLHELLQKIRREGLLKIEKDVDDPQGSPIFSKYPTVGR 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ + F+ DY+RM++ GN ++EIE LMD EID E P A++ + +LPA GIV
Sbjct: 121 DPRVIEFMTDYLRMMVSGNLNAHEIEALMDSEIDTYHQESHAPVAALARLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ M + Q P +LG IG +L GT LGI+L+Y + P ++ +
Sbjct: 181 AAVLGVVNTMSAMGQPPAVLGAMIGSALLGTFLGILLAYGVVEPFGGLLEQRADDAGKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A M G P AIE+GRKVL S RP
Sbjct: 241 QCIKSTLLASMQGYNPATAIEFGRKVLFSSVRPGF 275
>gi|259417201|ref|ZP_05741120.1| chemotaxis protein MotA [Silicibacter sp. TrichCH4B]
gi|259346107|gb|EEW57921.1| chemotaxis protein MotA [Silicibacter sp. TrichCH4B]
Length = 289
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 153/274 (55%), Gaps = 6/274 (2%)
Query: 14 IIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
+ GG+ GG I+I+ PFE++++ GA +G F+++N + +K + + ++F
Sbjct: 14 VFGGYLLAGGKLGIIIKSLPFEMMMIGGAAVGAFLISNDMGGVKHTLKDMGKVFKGPKWK 73
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
D Y D+L LL+ L+ + + + E E HI+DP NST+F P +L + E I D MR
Sbjct: 74 PDDYKDLLCLLFALI-RIARANPVEVEQHIEDPENSTVFGKYPKILADKEAINLISDTMR 132
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+ +++E ++++ I+ L+ L HA+ M + LPA+GIV A+LG+IK M ++
Sbjct: 133 SASMNYDDPHQVEEVLEKRIEANLHHALHSSHALQTMADGLPALGIVAAVLGVIKTMASI 192
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
Q P++LG IG +L GT LG+ LSY L P ++KS + Y ++++ L+A ++
Sbjct: 193 DQPPEVLGKMIGGALVGTFLGVFLSYGLVAPFAGKVKSVVEEDAHFYQLIREVLVANLHN 252
Query: 252 AIPQVAIEYGRKVLPLSERP---SIEIVAQEVLQ 282
+ IE GR+ P RP +E EV Q
Sbjct: 253 HAAAICIEVGRQNTPSHIRPGFSELEEALNEVKQ 286
>gi|220905441|ref|YP_002480753.1| flagellar motor protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869740|gb|ACL50075.1| flagellar motor protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 282
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 149/273 (54%), Gaps = 1/273 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL I + G+ G IL QP E +I+ G GLG F + S
Sbjct: 1 MYLLIGLAIVAGSVFTGYTLAHGEWGILFQPAEFIIILGCGLGAFFGSQTKYTFGLILKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y + L LLY L + + E+ ++ P +S IF+ P V ++
Sbjct: 61 LKHLFADPGSSKGRYLETLALLYALFSKMHREGVISIESDVEKPESSPIFSKYPNVSKDT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ FI D +R+ + +I++LMD +I + E + P HA+SHM ESLP +GIV
Sbjct: 121 KVVNFIGDTLRVYLT-TGDPADIDSLMDVDITTMREEGILPAHAVSHMAESLPGMGIVAC 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ AMG +++ P++LG IG +L GT GI+ Y L P+ S++++ ++H Y
Sbjct: 180 VLGVVLAMGKINEPPEVLGHYIGAALVGTFFGILCCYGLFGPMGSKLENYVAEEHFYYHS 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK+A+ A + G+ P +A+EYGR+ +P RPS
Sbjct: 240 VKEAVAAAIRGSTPLIAVEYGRRAIPYPFRPSF 272
>gi|163732482|ref|ZP_02139927.1| flagellar motor protein MotA [Roseobacter litoralis Och 149]
gi|161393842|gb|EDQ18166.1| flagellar motor protein MotA [Roseobacter litoralis Och 149]
Length = 289
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 151/275 (54%), Gaps = 3/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + GG+ A GG I+ + PFE+ ++ GA +G F+++N + IK +
Sbjct: 1 MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAVGAFLISNDMSAIKHTM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L +F Y D+L LL+ L+ L + + E HI+ P S+IF+ +++
Sbjct: 61 RDLGRVFKGPKWSHSDYKDLLCLLFELI-RLARQNPVAIEEHIESPEESSIFSKYEKIVK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD +R + +++E ++++ ++ ++ + HA+ + + LPA+GIV
Sbjct: 120 DKEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++ Q P++LG IG +L GT LG+ L+Y P +++KS + Y
Sbjct: 180 AAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFVGPFAAKVKSVTEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++++ L+A ++ + IE GR+ P RPS
Sbjct: 240 QLIREVLVANLHAHATNICIEVGRQNTPSHHRPSF 274
>gi|283851027|ref|ZP_06368312.1| flagellar motor protein MotA [Desulfovibrio sp. FW1012B]
gi|283573673|gb|EFC21648.1| flagellar motor protein MotA [Desulfovibrio sp. FW1012B]
Length = 284
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 155/275 (56%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + + + GGF GG+ +L QP E++I+ GA LG F ++ P + +
Sbjct: 1 MFVIIGIVVVLGSVFGGFLLEGGHMAVLFQPIELLIIGGAALGSFFISAPKSIALGTFKH 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L +F K Y D+L LL+ L+ ++ E H+ P S P + +N
Sbjct: 61 VLHVFKGKEPAAADYQDLLTLLFELINIARRDGIVALEPHVSKPEQSATINRYPNIAKNR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICD ++ ++ ++ ++LM +I + + + A++ + ++LP +GIV A
Sbjct: 121 QLAYFICDNIKALLSEGIDAHRYDDLMRTDIATLHHHAMIAPGAVTKVADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK-STRLKQHRLYI 239
+LGI+ MG +++ P++LG +IG +L GT LGI+LSY P+ S ++ + +QH L+
Sbjct: 181 VLGIVLTMGKINEPPEVLGHSIGAALVGTFLGILLSYGFVGPMASNLEYQAKAQQHMLH- 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ K+ L A+ +G P +++E GR+ +P RP++E
Sbjct: 240 VAKEVLAAFNSGFSPMLSVEMGRRAIPDDVRPTME 274
>gi|83593177|ref|YP_426929.1| motA, chemotaxis (motility protein A [Rhodospirillum rubrum ATCC
11170]
gi|83576091|gb|ABC22642.1| motA, chemotaxis (motility protein A [Rhodospirillum rubrum ATCC
11170]
Length = 285
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 154/268 (57%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+IGG+ A GG+ +L QPFE +I+ GA LG F++ NP V+ + SL + +
Sbjct: 13 SVIGGYAAPGGHLAVLWQPFEFIIILGASLGAFLIGNPKTVLTGTLKSLGPMMKGPKHNK 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+Y ++L LLY L K E+HI+ P +S IF P +++ F+CDY+R+
Sbjct: 73 ASYLELLSLLYTLFRLAKTKGDLALESHIEKPEDSPIFQKFPAFSKDHHNVEFLCDYLRL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ +G ++E+E +++ EI+ E A+ +M + +PA+GIV A+LG+I MG+++
Sbjct: 133 LTLGTNNAHEVETIIEAEIESHHVEAHNIPSAMVNMADGMPALGIVAAVLGVIHTMGSIT 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ P++LG IG +L GT +G++LSY P I++ Q + +K ++A+M G
Sbjct: 193 EPPEVLGHLIGAALVGTFMGVLLSYGFFAPFGRAIEAVFNNQTQYLHCMKSGILAHMQGY 252
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEV 280
PQV+IE+ RK LP S RPS V V
Sbjct: 253 APQVSIEFARKTLPPSVRPSFAEVEDTV 280
>gi|89068742|ref|ZP_01156128.1| chemotaxis MotA protein [Oceanicola granulosus HTCC2516]
gi|89045705|gb|EAR51767.1| chemotaxis MotA protein [Oceanicola granulosus HTCC2516]
Length = 288
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 150/275 (54%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ +G+ + + GGF GG I++ P+E +++ GA LG FV+AN V+K S
Sbjct: 1 MNLFLGIALVFGLVFGGFILSGGKLDIVLYALPYEGMMIGGAALGAFVIANSFGVLKGSA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++++ Y D+L LLY L K + H+++P +S IF P +L+
Sbjct: 61 IGMMKVITGPRWKAADYSDLLNLLYELSRLYKSKGILALDEHVENPKDSEIFKRYPKILK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ T I D RM+ + Y+ E++++ +I +E L P A+S M + LPAIGIV
Sbjct: 121 DHFATELITDSFRMLSMNFDDQYQTEDVINRKIKKHHHESLAPASAVSVMADGLPAIGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M L Q P +LG IG +L GT LG+ L+Y L P++ ++K + Y
Sbjct: 181 AAVLGVIKTMSALDQPPDVLGKMIGGALVGTFLGVFLAYCLVAPISGRLKQIEEEDGTFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+I++ +A + P + IE GR +P S++P
Sbjct: 241 LIIRDVFVAMVAKHPPNICIEIGRGNIPTSKQPDF 275
>gi|239908608|ref|YP_002955350.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239798475|dbj|BAH77464.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 288
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 163/289 (56%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G I + CI+ GF GN +++ P E++++AG LG FV+++P V+ +
Sbjct: 1 MFVILGTIIVLGCILSGFILEKGNFDLILSAAPPELLMIAGGALGAFVISSPKDVLSHTI 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
S+ +FG + Y +L L L +++ E ++ P S IF+ +
Sbjct: 61 KSVFTVFGGMVTSKAYYTTLLVTLSGLYMKIRREGLVAIEKDVERPAESPIFSDFAKNKK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N+E+ FICD MR+ N ++E +N+MD +I+ +E L P H+I + + LPA+GIV
Sbjct: 121 NHEVLLFICDTMRIFSTVNIEAHEFDNIMDADIEATAHELLIPSHSIGKIADGLPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LG++ MG L++ ++LG +IG +L GT +G++L+Y P+ + ++ + +
Sbjct: 181 ACVLGVVITMGKLNEPAEVLGHSIGAALVGTFMGVLLAYGFVAPIATNLEFRAKEIEHIL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++ K +L +++ G P VA+E GR+ +P+ RP+ E + +E ++ + K
Sbjct: 241 LVAKASLGSFVGGNPPPVALEAGRRAIPIHYRPTFEQL-EEAIKASKGK 288
>gi|21233082|ref|NP_638999.1| flagellar motor protein MotA [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|188993234|ref|YP_001905244.1| flagellar motor protein MotA [Xanthomonas campestris pv. campestris
str. B100]
gi|21114935|gb|AAM42923.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|167734994|emb|CAP53206.1| Flagellar motor component MotA [Xanthomonas campestris pv.
campestris]
Length = 284
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 157/259 (60%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLTGVMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P VL ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGTYPKVLADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPAHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS
Sbjct: 255 KIALEFARKTLPSNVRPSF 273
>gi|85710172|ref|ZP_01041237.1| flagellar motor protein [Erythrobacter sp. NAP1]
gi|85688882|gb|EAQ28886.1| flagellar motor protein [Erythrobacter sp. NAP1]
Length = 287
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 152/277 (54%), Gaps = 4/277 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IG+ + I+ + GGF GG P + P E++++ GA +G ++ N + IK G
Sbjct: 1 MFAAIGIIVLIVMVFGGFTLAGGALGPILAALPLEMMMIGGAAIGAVLIGNSMHEIKLLG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + + D + L LM L+ E+H+ DP NS IF+ P +
Sbjct: 61 KGVAKVFKGPKFTNEDHIDAIALTSKLMKVLRSDGAVALESHVTDPANSAIFSEYPRLQS 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ + ICD + +++V G+ ++ IE+++D I L+E +P H I + ++ PA+G
Sbjct: 121 DPVVVDMICDPLTLMVVSSGSLDTHAIEDVIDNAIKTQLHEMEEPAHTIQSLADAFPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG+IK MG + Q P+ILG IG +L GT LG++L+Y P+ S++K +
Sbjct: 181 IVAAVLGVIKTMGAIDQPPEILGKMIGAALVGTFLGVLLAYGFAGPMASRLKQVNTHDQQ 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ +K+ +++ ++G + +E R LP + RP +
Sbjct: 241 IFHSIKQVIVSSLHGYPQPLVLEAARSGLPPAHRPKL 277
>gi|149203115|ref|ZP_01880086.1| flagellar motor protein MotA [Roseovarius sp. TM1035]
gi|149143661|gb|EDM31697.1| flagellar motor protein MotA [Roseovarius sp. TM1035]
Length = 289
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 158/278 (56%), Gaps = 9/278 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + + GG+ A GG ++++ PFE +++ GA +G F+++N IK +
Sbjct: 1 MVGIIGIVVIFVMVFGGYVAAGGKLGLILKALPFEFMMIGGAAVGAFLISNDAPAIKHTL 60
Query: 59 VSLLEIF-GYKALGQDTYCDVLKLLYILMYNLKKGSRN--ETENHIDDPYNSTIFTSIPT 115
+ ++F G K QD Y D+L LL+ L ++ G +N E HI+ P +S IF+ P
Sbjct: 61 GDIAKVFKGPKWKPQD-YRDLLCLLFEL---IRLGRQNPIAVEEHIESPNDSAIFSKYPK 116
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
+L + E I D +R + +++E ++++ I+ L+ L HA+ M + LPA+
Sbjct: 117 ILADAEAVALISDTLRSASMNYDDPHQVEEVLEKRIEANLHHALHSSHALQTMADGLPAL 176
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GIV A+LG+IK M ++ Q P+ILG IG +L GT LG+ LSY L P +++K +
Sbjct: 177 GIVAAVLGVIKTMASIDQPPEILGKMIGGALVGTFLGVFLSYGLVGPFAAKVKDVVEEDG 236
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
Y ++++ L+A ++ + IE GR+ P +RPS
Sbjct: 237 HFYQLIREVLVANLHNHATNICIEVGRQNTPNHKRPSF 274
>gi|66770022|ref|YP_244784.1| flagellar motor protein MotA [Xanthomonas campestris pv. campestris
str. 8004]
gi|66575354|gb|AAY50764.1| chemotaxis protein [Xanthomonas campestris pv. campestris str.
8004]
Length = 284
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 156/259 (60%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLTGVMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P VL ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGTYPKVLADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPAHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL + +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLPAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS
Sbjct: 255 KIALEFARKTLPSNVRPSF 273
>gi|89902462|ref|YP_524933.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89347199|gb|ABD71402.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 270
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 144/254 (56%), Gaps = 2/254 (0%)
Query: 22 GGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
GGN ++++ PFE+V + G LG F + N KV++ + + + + Y +++
Sbjct: 6 GGNIGVILKALPFELVTIFGGALGAFAVNNQPKVLRATLKLIPQAVKGSKYTKARYLELM 65
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
LLY ++ +K E +++P+ S IF TV ++ + F+ DY+RM++ GN
Sbjct: 66 ALLYDILQKARKEGLMAIEKDVEEPHGSAIFKKYATVGSDHHVVEFMTDYLRMMVSGNLN 125
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
++EIE+LMD EID E P AI+ + +LPA GIV A+LG++ MG++ Q P +LG
Sbjct: 126 AHEIESLMDSEIDTHHAEAHAPVAAIARLAGALPAFGIVAAVLGVVNTMGSVGQPPAVLG 185
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
I +L GT LGI+L+Y++ PL ++ + +K L+A M G P AIE
Sbjct: 186 GMIASALVGTFLGILLAYAVVEPLGGVLEQKIEDSAKELQCIKTTLLASMQGYNPATAIE 245
Query: 260 YGRKVLPLSERPSI 273
+GRKVL +ERP+
Sbjct: 246 FGRKVLFSTERPTF 259
>gi|167644833|ref|YP_001682496.1| flagellar motor protein MotA [Caulobacter sp. K31]
gi|167347263|gb|ABZ69998.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
Length = 289
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 168/284 (59%), Gaps = 3/284 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G F GG ++I+ P E++ + GAG+ F+++N + VIK +G
Sbjct: 1 MFQIIGIVLLFGLVFGSFIMSGGKMDVIIEAAPHELMCILGAGIASFLISNSMTVIKATG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+IF Y D+L LL++L +K E+HI+ P +STIF P + +
Sbjct: 61 GGFGKIFKGPKWKTSDYRDLLSLLFLLTKTMKSKGVIALESHIEKPNDSTIFQRYPKITK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E L P HA+ + ++LPA+GIV
Sbjct: 121 DHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEGLAPAHALQSLADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P +LG IG +L GT LG+ L+Y L P ++++ + ++ Y
Sbjct: 181 AAVLGVIKTMGSITEPPAVLGAMIGGALVGTFLGVFLAYGLVGPFSTRLTAVVDEEGAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
I++ L+A+++G Q+++E GR +P +PS + +E LQ
Sbjct: 241 RIIQAVLVAHLHGNAAQISVEIGRGNVPTPSQPSF-LELEEALQ 283
>gi|325915928|ref|ZP_08178224.1| flagellar motor component [Xanthomonas vesicatoria ATCC 35937]
gi|325537895|gb|EGD09595.1| flagellar motor component [Xanthomonas vesicatoria ATCC 35937]
Length = 284
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 157/259 (60%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLTGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPAHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS
Sbjct: 255 KIALEFARKTLPSNVRPSF 273
>gi|126730125|ref|ZP_01745937.1| flagellar motor protein MotA [Sagittula stellata E-37]
gi|126709505|gb|EBA08559.1| flagellar motor protein MotA [Sagittula stellata E-37]
Length = 289
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 153/276 (55%), Gaps = 3/276 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + GG+ A GG I+++ PFE +++ GA +G F++ N +K +
Sbjct: 1 MLGIIGIVVLFAMVFGGYLAAGGKMGIILKALPFEFMMIGGAAVGAFLIGNDGGTVKHAL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + Y D+L LL+ L+ L + + E HI+ P STIF P +L
Sbjct: 61 KDIGKVFKGAKWKHEDYRDLLCLLFELI-RLARQNPVAIEEHIESPSESTIFGKYPKILG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ICD MR + + +++E ++D+ ++ + + + HA+ M ++LPA+GIV
Sbjct: 120 DKYAIELICDTMRSVSMNYDDPHQVEEVLDKRLEGMEHHAMHSSHALQSMADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P++LG IG +L GT LG+ L+Y L P ++K+ + Y
Sbjct: 180 AAVLGVIKTMASIDQPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAGKVKAVAEEDMHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++++ L+A ++ + IE GR+ P RP+ E
Sbjct: 240 HLIREVLVANLHNHATNICIEVGRQNTPGHFRPTFE 275
>gi|77464894|ref|YP_354398.1| flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126463736|ref|YP_001044850.1| flagellar motor protein MotA [Rhodobacter sphaeroides ATCC 17029]
gi|221640815|ref|YP_002527077.1| flagellar motor protein MotA [Rhodobacter sphaeroides KD131]
gi|332559793|ref|ZP_08414115.1| MotA2 [Rhodobacter sphaeroides WS8N]
gi|77389312|gb|ABA80497.1| Flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126105400|gb|ABN78078.1| flagellar motor protein [Rhodobacter sphaeroides ATCC 17029]
gi|221161596|gb|ACM02576.1| Flagellar motor protein precursor [Rhodobacter sphaeroides KD131]
gi|332277505|gb|EGJ22820.1| MotA2 [Rhodobacter sphaeroides WS8N]
Length = 289
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 156/275 (56%), Gaps = 3/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ GG ++++ PFE++++ GA +G F++AN L +K +
Sbjct: 1 MFGIVGILVIFVMVFGGYMLAGGKLGVILKALPFEMIMIGGAAVGSFLLANDLATVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F Y D+L LL+ L+ + K + E HI++P S++F+ P +
Sbjct: 61 KDLGKVFKGPKWKPGDYRDLLCLLFELV-RIAKVNPVGLEEHIENPEESSVFSRYPKIQH 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+++ ICD +R + ++E ++D+ ++ + L HA+ M ++LPA+GIV
Sbjct: 120 DHDAIELICDTLRAASMNYDDPNQVEEVLDKRVEKAQHHALHSSHALQSMADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P+ILG IG +L GT LG+ L+Y + P +++K+ + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEILGKMIGGALVGTFLGVFLAYGIVGPFATRVKAVVEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++++ LIA ++ + IE GR+ P RPS
Sbjct: 240 NLIREVLIANLHNHPANMCIEVGRQNTPHHVRPSF 274
>gi|99082791|ref|YP_614945.1| flagellar motor protein MotA [Ruegeria sp. TM1040]
gi|99039071|gb|ABF65683.1| Chemotaxis motA protein (Motility protein A) [Ruegeria sp. TM1040]
Length = 289
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 152/274 (55%), Gaps = 6/274 (2%)
Query: 14 IIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
+ GG+ GG I+++ PFE++++ GA +G F+++N + +K + + ++F
Sbjct: 14 VFGGYLLAGGKLGIILKSLPFEMMMIGGAAVGAFLISNDMGGVKHTLKDMGKVFKGPKWK 73
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
D Y D+L LL+ L+ + + + E E HI+DP NS +F P +L + E I D MR
Sbjct: 74 PDDYKDLLCLLFALI-RIARANPVEVEQHIEDPENSAVFGKYPKILADKEAINLISDTMR 132
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+ +++E ++++ I+ L+ L HA+ M + LPA+GIV A+LG+IK M ++
Sbjct: 133 SASMNYDDPHQVEEVLEKRIEANLHHALHSSHALQTMADGLPALGIVAAVLGVIKTMASI 192
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
Q P++LG IG +L GT LG+ LSY L P ++KS + Y ++++ L+A ++
Sbjct: 193 DQPPEVLGKMIGGALVGTFLGVFLSYGLVAPFAGKVKSVVEEDAHFYQLIREVLVANLHN 252
Query: 252 AIPQVAIEYGRKVLPLSERP---SIEIVAQEVLQ 282
+ IE GR+ P RP +E EV Q
Sbjct: 253 HAAAICIEVGRQNTPSHIRPGFSELEEALNEVKQ 286
>gi|294624637|ref|ZP_06703309.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292601072|gb|EFF45137.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 284
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 158/259 (61%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLSGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS+
Sbjct: 255 KIALEFARKTLPSNVRPSL 273
>gi|260574391|ref|ZP_05842395.1| flagellar motor protein MotA [Rhodobacter sp. SW2]
gi|259023287|gb|EEW26579.1| flagellar motor protein MotA [Rhodobacter sp. SW2]
Length = 289
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 156/274 (56%), Gaps = 3/274 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+GL + + + GG+ GG+ +++ PFE++I+ GA +G F++AN L +K +
Sbjct: 1 MIGIVGLLVIFIMVFGGYMLAGGHIMVVLAALPFEMIIIGGAAVGTFLLANDLATVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F Y D+L LL+ L+ + + + E HI++P S++F P + +
Sbjct: 61 KDIGKVFKGPKWKPADYRDLLCLLFELI-RIARANPVGLEEHIENPAESSVFGRYPKIQK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD +R + +++E ++D+ ++ L HA+ + ++LPA+GIV
Sbjct: 120 DHESVELICDTLRAASMNYDDPHQVEEVLDKRMETSHTHALHTSHALQSIADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG + Q P ILG IG +L GT LG+ L+Y + P ++++++ + Y
Sbjct: 180 AAVLGVIKTMGAIDQPPAILGKMIGSALVGTFLGVFLAYGIVGPFSTRVQAVVEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+++++ L+A ++ + IE GR+ P RPS
Sbjct: 240 MLIREVLVANLHNHPANICIEVGRQNTPHHMRPS 273
>gi|114571063|ref|YP_757743.1| flagellar motor protein MotA [Maricaulis maris MCS10]
gi|114341525|gb|ABI66805.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
Length = 290
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 148/244 (60%), Gaps = 2/244 (0%)
Query: 31 PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF-GYKALGQDTYCDVLKLLYILMYNL 89
PFE++++ GA +G F++ N K + + L ++F G K GQD Y D+L LL++L +
Sbjct: 33 PFEMMMIGGAAVGAFLIGNKPKTVFKTLGDLSKVFTGPKWKGQD-YTDLLSLLFLLTKTM 91
Query: 90 KKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDE 149
K E+HI++P STIFT P +++++ FICD +RM+ + +++E+ M++
Sbjct: 92 KTKGVIALESHIENPTESTIFTRFPRIMKDHFAVDFICDTLRMMTMNLEDPHQVEDAMEK 151
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
+++ +E P HA+ M + LPA+GIV A+LG+IK MG + P +LG IG +L GT
Sbjct: 152 QLEKHHHEAADPAHAMQTMADGLPALGIVAAVLGVIKTMGAIESPPAVLGGYIGGALVGT 211
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
LG+ ++Y P + +++ ++H Y I++ L+A+++G Q+++E GR +P
Sbjct: 212 FLGVFIAYGFVGPFAAYMQAVYDEEHSFYKIIQDVLVAHLHGNAAQISVEIGRGGVPSKM 271
Query: 270 RPSI 273
+PS
Sbjct: 272 QPSF 275
>gi|285019702|ref|YP_003377413.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
gi|283474920|emb|CBA17419.1| probable flagellar motor protein [Xanthomonas albilineans]
Length = 284
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 163/273 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + ++ + GG+ G L QP+E++I+ G+ LG F+++ P K++K++
Sbjct: 1 MLIIVGFIVVLVSVAGGYVLSHGKLGALWQPYELMIIGGSALGAFLVSTPGKIVKETISG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F D Y L L+Y L+ ++ E+H+++P +S IF + P VL ++
Sbjct: 61 IIGVFKGPQYKADDYRGTLTLIYELLNKARRDGFMALEDHVENPASSAIFGNYPKVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R++I N +E+E L++ E++ +E L P HA+S + + LP GIV A
Sbjct: 121 HLLDFITDCLRLMIGSNIEPHELEPLLELELEKHHHEALAPAHALSKVSDGLPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ + +G +G +L GT LGI+++Y +PL++ +++ + R+Y
Sbjct: 181 VLGIVITMGSIGGPIEEIGHHVGAALVGTFLGILMAYGFVSPLSAAMEARAEQDGRIYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK AL+A + G P++A+E+ RK LP + RPS
Sbjct: 241 VKTALLACLRGYNPKIALEFARKTLPTNVRPSF 273
>gi|21244418|ref|NP_644000.1| flagellar motor protein MotA [Xanthomonas axonopodis pv. citri str.
306]
gi|294667302|ref|ZP_06732522.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|21110080|gb|AAM38536.1| chemotaxis protein [Xanthomonas axonopodis pv. citri str. 306]
gi|292602974|gb|EFF46405.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 284
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 157/259 (60%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLSGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS
Sbjct: 255 KIALEFARKTLPSNVRPSF 273
>gi|116624959|ref|YP_827115.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
gi|116228121|gb|ABJ86830.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
Length = 291
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 144/274 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IIG+ I + I G+ G +L+QP E+VI+ GA +G V+ANPL V+
Sbjct: 1 MLSIIGIVIVLGAIAAGYMMEHGKFLVLLQPAELVIIFGAAIGTVVIANPLPVLTKIAKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ +F + Y + LK+LY L +K + E +D+P + P L +
Sbjct: 61 LVAVFAGSPFTKARYLETLKMLYELFSLSRKAGTAKLEEEVDNPSKGQVLNKYPKFLAQH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CD +RM + G EI+++M+ ++D+ E +P A+S M ++LP +GIV A
Sbjct: 121 HALHFLCDTLRMAVTGGVDPLEIDSMMEADLDVHHKESAEPIAALSTMADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG L + +G + +L GT LGI+L Y + PL + + Y++
Sbjct: 181 VLGVVLTMGALGGPKEAIGEKVAAALVGTFLGILLCYGIFGPLAVAMGKNAEADSQFYLV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ A + ++ P +A+E R+ +P RP+ +
Sbjct: 241 LRMAALGFVKELSPMLAVELARRSIPAVVRPTFQ 274
>gi|254488786|ref|ZP_05101991.1| chemotaxis MotA protein [Roseobacter sp. GAI101]
gi|214045655|gb|EEB86293.1| chemotaxis MotA protein [Roseobacter sp. GAI101]
Length = 289
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 152/275 (55%), Gaps = 3/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + GG+ A GG I+++ PFE ++ GA G F+++N L +K +
Sbjct: 1 MIGIVGIITIFVMVFGGYLAAGGKMGIILKSLPFEFTMIGGAAAGAFLISNDLPAVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + Y D+L LL+ L+ L + + E E HI++P STIF+ P +L
Sbjct: 61 KDVGKVFKGPKWKHEDYRDLLCLLFELV-RLARQNPIEIEPHIENPMESTIFSKYPKILT 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ ++ L L HA+ + + LPA+GIV
Sbjct: 120 DAEAIAMICDTMRSASMNYDDPHQVEEVLEKRMEANLEHSLHSSHALQTIADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P+ILG IG +L GT LG+ L+Y L P +++ + Y
Sbjct: 180 AAVLGVIKTMASIDQPPEILGKLIGGALVGTFLGVFLAYGLVGPFAAKVADVTKEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++++ L+A ++ + IE GR+ P RP+
Sbjct: 240 NLIREVLVANLHNHATNICIEVGRQNTPSHCRPTF 274
>gi|119947182|ref|YP_944862.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119865786|gb|ABM05263.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 287
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 161/285 (56%), Gaps = 1/285 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + C+ GGF +GGN +L +P EI+I+ GAG G ++ + +
Sbjct: 1 MIRLAGLVFIMFCLFGGFMIVGGNLKLLWKPTEILIIFGAGSGALIVGSSKNCLILITSQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET-ENHIDDPYNSTIFTSIPTVLEN 119
L ++F ++ Y +L L Y LM K S + E+H++D NS+IF P VL N
Sbjct: 61 LKDVFTVNPYSKEFYRQLLSLHYQLMRVKKMPSGAKVLESHVEDYENSSIFNQYPLVLRN 120
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ L FI D RM I ++EI+ ++ EI++I E L+P A+ + +SLP +G++G
Sbjct: 121 DLLVHFIVDNFRMTISSLVAAHEIDATLESEIEVITSELLEPAVALKKLADSLPGLGVLG 180
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++GII M ++ ++G+ I +L GT LG+ Y L +PL+ +KS +K +
Sbjct: 181 AVMGIILTMQSIDTDIAMIGSNIATALIGTFLGVFGCYCLFDPLSCAVKSNVMKSIVPFE 240
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+VK+ L+A+++ P ++I+ GR+ + + E+P+ +I+ + Q +
Sbjct: 241 VVKQILVAHVSNRSPLLSIDSGRRAIEIDEKPAFKIIEEWADQLD 285
>gi|103488395|ref|YP_617956.1| flagellar motor protein MotA [Sphingopyxis alaskensis RB2256]
gi|98978472|gb|ABF54623.1| flagellar motor protein [Sphingopyxis alaskensis RB2256]
Length = 287
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 151/276 (54%), Gaps = 4/276 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M ++G+ + IL + GGF GGN P + P E++I+ GA LG ++ N +K
Sbjct: 1 MFPVVGIVVLILLVFGGFALTGGNLGPVMHALPHEMLIIGGAALGSLIIGNSGADLKALA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F + Y D + L+ LM ++ E HI+DP NSTIF P +L+
Sbjct: 61 GGLGKVFKGPQYKKQDYLDCILLVSSLMKMMRTEGPVAVEPHIEDPKNSTIFQQYPKLLK 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
++ L ICD +R+++V G + +E +MD + + +KP + + ++LPA+G
Sbjct: 121 DDTLVHLICDTLRLVVVSSGTLDPHAVEEVMDNALKSHHHHSMKPADGLQSLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ + P+ILG IG +L GT LG++L+Y L P ++ ++
Sbjct: 181 IVAAVLGVVKTMGSIDKPPEILGAMIGSALVGTFLGVLLAYGLVGPFATRARTVIESDGA 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+Y VK+ +IA ++G + IE R + +PS
Sbjct: 241 IYHTVKQLIIASLHGHPQPLVIEAARSGVDHHNQPS 276
>gi|294679002|ref|YP_003579617.1| chemotaxis protein MotA [Rhodobacter capsulatus SB 1003]
gi|294477822|gb|ADE87210.1| chemotaxis protein MotA [Rhodobacter capsulatus SB 1003]
Length = 289
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 150/262 (57%), Gaps = 3/262 (1%)
Query: 14 IIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
+ GG+ A GG I+++ PFE++++ GA +G FV++N L IK + + ++F
Sbjct: 14 VFGGYVAAGGKMGIILKALPFEMIMIGGAAVGAFVLSNDLPSIKHTVKDIGKVFKGAKWK 73
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
Y D+L LL+ L+ L + + E HI+ P NS+IF P +L ++E ICD MR
Sbjct: 74 PSDYRDLLCLLFELI-RLARQNPVAIEEHIEAPENSSIFGKYPKILHDHEAVEMICDTMR 132
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+ +++E +++++++ + + HA+ + +++PA+GIV A+LG+IK M ++
Sbjct: 133 SASMNYDDPHQVEEVLEKQLEANYHHAMHSSHAMQSIADAMPALGIVAAVLGVIKTMASI 192
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
Q P+ILG IG +L GT LG+ L+Y P ++IK+ + Y ++++ L+A ++
Sbjct: 193 DQPPEILGKMIGGALVGTFLGVFLAYGFIGPFATRIKAVVDEDAHFYKLIREVLVANLHN 252
Query: 252 AIPQVAIEYGRKVLPLSERPSI 273
+ IE GR+ P RPS
Sbjct: 253 HATNICIEVGRQNTPHHIRPSF 274
>gi|124268057|ref|YP_001022061.1| chemotaxis signal transduction protein CheY [Methylibium
petroleiphilum PM1]
gi|124260832|gb|ABM95826.1| Chemotaxis signal transduction protein CheY [Methylibium
petroleiphilum PM1]
Length = 286
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 154/275 (56%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + + CI G + GGN +++ P E++ + G G FV+AN K +K
Sbjct: 1 MFVIIGYVVALGCIFGAYAIHGGNMQVILHAIPTEMMAIGGGAAGAFVVANQPKTLKAVL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + + Y +++ LLY ++ +K E ++DP+NS +F TV
Sbjct: 61 KAIPTLLKGSKYTKARYMELMALLYDILQKARKEGLMAIEKDVEDPHNSPLFKKYATVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN +EIE+LMD EI+ +E P AI + +LPA GIV
Sbjct: 121 DHHVVEFVTDYLRMMVSGNLNPHEIESLMDSEIETHHHEAHAPAAAIGRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y++ PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYAVVEPLGGLLEQKNDEGSKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K L+A M G P +A+E+GRK L +ERPS
Sbjct: 241 QCIKTTLLASMQGYAPAIAVEFGRKTLYSTERPSF 275
>gi|289668314|ref|ZP_06489389.1| flagellar motor protein MotA [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 284
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 156/259 (60%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETFSGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG +
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGAIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS
Sbjct: 255 KIALEFARKTLPSNVRPSF 273
>gi|303325923|ref|ZP_07356366.1| chemotaxis protein MotA [Desulfovibrio sp. 3_1_syn3]
gi|302863839|gb|EFL86770.1| chemotaxis protein MotA [Desulfovibrio sp. 3_1_syn3]
Length = 282
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 147/273 (53%), Gaps = 1/273 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL I + G+ G +L QP E +I+ G GLG F + S
Sbjct: 1 MYLLIGLAIVAASVFTGYTLAHGEWGVLFQPAEFIIILGCGLGAFFGSQTKYTFSLIVKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y + L LLY L + + E+ ++ P S IF+ P V ++
Sbjct: 61 LKHLFADPGSSKSRYLETLALLYALFSKMHREGVISIESDVEKPEASPIFSKYPNVSKDT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI D +R+ + +I++LMD +I + E + P HA+SHM ES+P +GIV
Sbjct: 121 RIVNFIGDTLRVYLT-TGDPADIDSLMDVDIATMREEGILPAHAVSHMAESMPGMGIVAC 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ AMG +++ P++LG IG +L GT GI+ Y L P+ +++++ ++H Y
Sbjct: 180 VLGVVLAMGKINEPPEVLGHYIGAALVGTFFGILCCYGLFGPMGAKLENFVSEEHFYYHS 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+K+A+ A + G+ P +A+EYGR+ +P RP+
Sbjct: 240 IKEAVAAAIRGSTPLIAVEYGRRTIPYPFRPTF 272
>gi|325923664|ref|ZP_08185289.1| flagellar motor component [Xanthomonas gardneri ATCC 19865]
gi|325545863|gb|EGD17092.1| flagellar motor component [Xanthomonas gardneri ATCC 19865]
Length = 284
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 157/259 (60%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ S+L +F +
Sbjct: 15 LGGYVLSHGKLGALWQPYELLIIGGAALGAFLVSTPGKIVKETFSSVLGVFKGPQYKSED 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLVYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E + P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEAMAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVAPLSAAMEARADQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS
Sbjct: 255 KIALEFARKTLPSNVRPSF 273
>gi|4928700|gb|AAD33690.1|AF136403_2 RpmA [Pseudomonas aeruginosa]
Length = 283
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 152/278 (54%), Gaps = 11/278 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
MS IIG+ + ++GGF GG +IQPFE++I+ GA LG F+ +NP + V+K
Sbjct: 1 MSKIIGIIVVFASVLGGFLLSGGKIGAIIQPFEVLIIGGAALGAFLQSNPGSTFMVVLKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+ ++F + Q Y +VL +LY ++ ++ E I+DP S IF+ P V
Sbjct: 61 AP----KMFSNR-FTQTYYLEVLGMLYEILNKSRREGMMAIEADIEDPAASPIFSKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP G
Sbjct: 116 LKDERMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFG 175
Query: 177 IVGAILGII--KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
IV A+LGI+ A Q +I GT LGI+ +Y PL ++ ++
Sbjct: 176 IVAAVLGIVITMAFAWRRQQAEIGHHVRRRPWWGTFLGILAAYGFVGPLAGALEHDAKEE 235
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
L+ +K L+A +G P +A+E+GRKVL + RP+
Sbjct: 236 LNLFEAIKACLVASASGMPPSLAVEFGRKVLLPAHRPT 273
>gi|289665511|ref|ZP_06487092.1| flagellar motor protein MotA [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 284
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 156/259 (60%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETFSGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P ++ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKLVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG +
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGAIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS
Sbjct: 255 KIALEFARKTLPSNVRPSF 273
>gi|326386938|ref|ZP_08208552.1| flagellar motor protein MotA [Novosphingobium nitrogenifigens DSM
19370]
gi|326208618|gb|EGD59421.1| flagellar motor protein MotA [Novosphingobium nitrogenifigens DSM
19370]
Length = 287
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 149/273 (54%), Gaps = 4/273 (1%)
Query: 5 IGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
IG+ + I+ + GGF GG P + P E++I+ GA +G + N L +K G L
Sbjct: 5 IGIVVLIVMVFGGFAFTGGALGPVMEAIPHELLIIGGAAIGATITGNSLHELKGIGAGLG 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
++F + + D + L LM L+ E+H+ DP STIF P +L N L
Sbjct: 65 KVFKGPKHNKQDHVDAIVLSTKLMKILRSDGPVALESHVTDPKTSTIFAEFPRILGNKAL 124
Query: 123 TTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ ICD + +I+V G + +E++MD + +E+ + HA+ + ++LPA+GIV A
Sbjct: 125 VSLICDTLTLIVVSSGTLEVHAVEDVMDHAMKTHFHEESEAQHALQGLSDALPALGIVAA 184
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++K MG++ + P ILG IG +L GT +GI+L+Y + PL ++K + ++
Sbjct: 185 VLGVVKTMGSIDKPPTILGAMIGSALVGTFMGILLAYGIVAPLAGRLKQVLDQDEMIFQA 244
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK+ ++A ++G + +E R L + RP +
Sbjct: 245 VKQVIVASLHGWPQPLVVESARSGLGHAFRPGL 277
>gi|91794979|ref|YP_564630.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91716981|gb|ABE56907.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 285
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 150/272 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS +IGL I + + GG+ GG L QP EI+I+ GAGLG ++ANP V+++ V
Sbjct: 1 MSKLIGLIIILASVFGGYIWAGGTLMSLWQPAEILIIFGAGLGALIIANPRSVLEEMLVQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
E+ + + Y + L+ +LM ++ + HI++P S++F P+VLE+
Sbjct: 61 TKELIVKEKEDPELYPQLFALMSLLMSQIQSQGLKVLDEHIENPRESSLFLMYPSVLEHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ F+ D +R+ +G +++E+L +EEI I ++L+P A++ +GE++P GI+ A
Sbjct: 121 DVLQFLIDNLRIQSIGKMSPHDLEHLFEEEIHRIEEDRLRPSEALNKVGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M N+ ++G + +L GT +GI Y +PL+ ++ ++
Sbjct: 181 VMGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPLSKALEHLVDRKSAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V L A+ G P +AI+ GRK + RPS
Sbjct: 241 VAAVLAAFAKGKPPTMAIDAGRKQIQSENRPS 272
>gi|166713569|ref|ZP_02244776.1| flagellar motor protein MotA [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 284
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 157/259 (60%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F +
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLSGIMGVFKGPQYKSED 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS
Sbjct: 255 KIALEFARKTLPSNVRPSF 273
>gi|58580311|ref|YP_199327.1| flagellar motor protein MotA [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|78049370|ref|YP_365545.1| flagellar motor protein MotA [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|84622282|ref|YP_449654.1| flagellar motor protein MotA [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188578753|ref|YP_001915682.1| flagellar motor protein MotA [Xanthomonas oryzae pv. oryzae PXO99A]
gi|325926422|ref|ZP_08187747.1| flagellar motor component [Xanthomonas perforans 91-118]
gi|58424905|gb|AAW73942.1| chemotaxis protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|78037800|emb|CAJ25545.1| flagellar motor component MotA [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|84366222|dbj|BAE67380.1| chemotaxis protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188523205|gb|ACD61150.1| flagellar motor component MotA [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|325543211|gb|EGD14649.1| flagellar motor component [Xanthomonas perforans 91-118]
Length = 284
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 157/259 (60%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F +
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLSGIMGVFKGPQYKSED 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSI 273
++A+E+ RK LP + RPS
Sbjct: 255 KIALEFARKTLPSNVRPSF 273
>gi|148554181|ref|YP_001261763.1| flagellar motor protein MotA [Sphingomonas wittichii RW1]
gi|148499371|gb|ABQ67625.1| Flagellar motor component-like protein [Sphingomonas wittichii RW1]
Length = 287
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 151/276 (54%), Gaps = 4/276 (1%)
Query: 5 IGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
IGL I + GGF GG+ P + P E++I+ GA LG V N +K +K G
Sbjct: 5 IGLVILFAMVFGGFAFTGGDLEPVLHAIPHEMLIIGGAALGAVVAGNSMKELKALGGGFA 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
++F G+ Y DV+ L+ LM L+ E HI+DP ST+F P +L+++ L
Sbjct: 65 KVFKGPKYGKKDYLDVIFLVSTLMKKLRTEGPVALEPHIEDPKGSTLFAEYPKLLKDDTL 124
Query: 123 TTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
I D +R++++ G +E++MD + ++++KP A+ ++ +SLPA+GIV A
Sbjct: 125 IHMITDTLRLVVISSGTLDPMAVEDVMDNALKTHHHDEIKPADAMQNLADSLPALGIVAA 184
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++K MG++ + P ILG IG +L GT LG++L+Y + P + + +Y +
Sbjct: 185 VLGVVKTMGSIDKPPAILGAMIGSALVGTFLGVLLAYGIVGPFAGRCRQVIEADGAIYGV 244
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
VK+ +IA ++G + IE R + +P+ V
Sbjct: 245 VKQIIIASLHGHPLPLVIEAARSGITHVNQPAFADV 280
>gi|330861236|emb|CBX71487.1| chemotaxis protein motA [Yersinia enterocolitica W22703]
Length = 259
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 139/237 (58%)
Query: 37 VAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE 96
+ GAG+G F++ N K IK + +L ++ + Y D++ LLY L+ ++
Sbjct: 1 IGGAGIGAFIVGNNGKAIKATMKALPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLS 60
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
E I+ P S IF++ P +L + L FI DY+R+I+ GN ++EIE LMDEEI+
Sbjct: 61 LERDIESPLESEIFSNYPRILADKVLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQ 120
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILS 216
E P +++ +G+SLPA GIV A++G++ A+ + + LG I ++ GT LGI+L+
Sbjct: 121 ECEVPAGSLAMVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLA 180
Query: 217 YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
Y +PL + ++ + ++ +K L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 181 YGFISPLATLLRQQSAETTKMMQCIKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSF 237
>gi|34498444|ref|NP_902659.1| flagellar motor protein MotA [Chromobacterium violaceum ATCC 12472]
gi|34104299|gb|AAQ60658.1| chemotaxis lafT protein [Chromobacterium violaceum ATCC 12472]
Length = 288
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 155/274 (56%), Gaps = 3/274 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + G+ I ++C+ GGF GG I+ QP E++I+ GA LG V+ NP V+K+ G
Sbjct: 1 MQQLFGILIVLVCVFGGFMLHGGVLSIIWQPTELLIICGAALGAVVLGNPPHVLKEMGGQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K G + L L+Y L+ +G + + H++ P S +F P VLEN
Sbjct: 61 IKRVVVRKKQGAEFQRQQLLLMYELLITASRGLK-ALDQHVEAPRQSPLFNRYPMVLENR 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D R++ +G ++E+E ++D+E+D I + ++P ++ + E++P GI+ A
Sbjct: 120 KLLAFIVDNFRLMAMGKINAHELEGVLDQELDAIHEQLMQPSKSLHKIAEAMPGFGILAA 179
Query: 181 ILGIIKAMGNLSQ--SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LGI+ AM ++Q S + ++ ++ GT +GI Y + +PL++ + ++ +
Sbjct: 180 VLGIVMAMNTVAQGASAGEIAASVAAAMVGTFIGIFFCYGVLDPLSNVMHQLVKEELSNF 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
VK L +++G P +AI+ GR+++ L+ +PS
Sbjct: 240 ESVKVVLTTHVSGKPPLLAIDAGRRLVQLNTKPS 273
>gi|114762173|ref|ZP_01441641.1| flagellar motor protein [Pelagibaca bermudensis HTCC2601]
gi|114545197|gb|EAU48200.1| flagellar motor protein [Roseovarius sp. HTCC2601]
Length = 289
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 152/275 (55%), Gaps = 3/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + GG+ GG I+++ PFE++++ GA LG F++ N V+K +
Sbjct: 1 MMGIIGIVVIFGMVFGGYLLAGGKMSIILKSLPFEMMMIGGAALGTFLIGNDAGVVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F Y ++L LL+ L+ L + S E H++ P STIF+ P +
Sbjct: 61 KDVGKVFKGAKWKPADYKELLCLLFELI-RLARQSPVAIEEHVESPDESTIFSKYPKIQG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ICD MR + + +++E ++D+ I+ + + ++ HA+ M + LPA+GIV
Sbjct: 120 DKIAIELICDTMRSMSMNYDDPHQVEEVLDKRIEALEHHRMHSSHALQAMADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y P ++K+ + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFAGPFAVKVKAVVEEDLHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++++ L+A ++ + IE GR+ P RPS
Sbjct: 240 QLIREVLVANLHNHATNICIEVGRQNTPAHFRPSF 274
>gi|255261774|ref|ZP_05341116.1| chemotaxis protein MotA [Thalassiobium sp. R2A62]
gi|255104109|gb|EET46783.1| chemotaxis protein MotA [Thalassiobium sp. R2A62]
Length = 289
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 150/274 (54%), Gaps = 3/274 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M ++G+ I + + GG+ GG I+++ PFE++++ GA G FV++N IK +
Sbjct: 1 MIGLVGIVIIFVMVFGGYILAGGKMGIILKSLPFEMIMIGGAAAGAFVLSNDKASIKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F D Y D+L LL+ L+ + + E HI+ P S IF +L+
Sbjct: 61 KDLQKVFKGPKWKPDDYRDLLCLLFELI-RIARADAIALEVHIEAPEKSKIFAKYENILQ 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E + ICD +R + +++E ++D I+ L K+ HA+ + + LPA+GIV
Sbjct: 120 DQEAVSLICDTLRTGSMNYDDPHQVEEVLDNRIEESLSRKMHSTHALQTIADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P++LG IG +L GT LG+ L+Y P +++K+ + Y
Sbjct: 180 AAVLGVIKTMASIDQPPEVLGKMIGGALVGTFLGVFLAYGFVGPFATKVKAVIEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++++ LIA ++ + IE GR+ P RPS
Sbjct: 240 QLIREVLIANLHKHATNICIEVGRQNTPNHVRPS 273
>gi|163744359|ref|ZP_02151719.1| flagellar motor protein [Oceanibulbus indolifex HEL-45]
gi|161381177|gb|EDQ05586.1| flagellar motor protein [Oceanibulbus indolifex HEL-45]
Length = 288
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 154/278 (55%), Gaps = 2/278 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ ++GL + + GGF GGN I++ P+E +++ GA LG FV+AN V+K S
Sbjct: 1 MTLLLGLVMVFGLVFGGFMLSGGNMDIVLHALPYEGMMIGGASLGAFVIANSFSVVKSSL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + Y D+L L++ L K + HI++P S IF P +++
Sbjct: 61 GGVVRVIKGPRWKAADYNDLLALMFELARLYKTKGIVAMDEHIENPEASPIFQRYPKLMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ +T I D RM+ + +++E++M+ +I +E L AI M + LPAIGIV
Sbjct: 121 DHFVTDLIADSFRMMSMQFDDRFQMEDVMNRKIKKHHHESLVSASAIQSMADGLPAIGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ + P+ILG IG +L GT LG+ L+Y + P+ +++ + +Y
Sbjct: 181 AAVLGVIKTMSSIDKPPEILGAMIGGALVGTFLGVFLAYCMVQPIAGRLEQIEEEDSAMY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+++ ++A + G P + IE GR +P +++P+ V
Sbjct: 241 TVIRDVIVAIVAGHPPSICIELGRGNIPTTKQPNFSAV 278
>gi|46581012|ref|YP_011820.1| flagellar motor protein MotA [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601692|ref|YP_966092.1| flagellar motor protein MotA [Desulfovibrio vulgaris DP4]
gi|46450433|gb|AAS97080.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|120561921|gb|ABM27665.1| chemotaxis protein MotA [Desulfovibrio vulgaris DP4]
gi|311234696|gb|ADP87550.1| flagellar motor protein MotA [Desulfovibrio vulgaris RCH1]
Length = 281
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 156/272 (57%), Gaps = 1/272 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL + IIGG+ GN +L+QP E++I+ GA +G F+ + + +
Sbjct: 1 MFIIIGLVVVFGSIIGGYLIANGNLAVLVQPAEMIIILGAAMGAFLASQTKYTLGLVIKN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IFG + + Y + L LL L + + E I+ P +S IFT P++ ++
Sbjct: 61 IKHIFGDPGMNKARYLETLALLNSLFSKMHREGVISIEQDIEKPESSAIFTKYPSISKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI D +R+ + S +IE+LM +++ + E++ A++ M ESLP +GIV A
Sbjct: 121 HIVHFIGDTLRVYLTTGDPS-DIESLMKIDMESMHEEEMVAPGAVNRMAESLPGMGIVAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG +++ P+ILG IG +L GT +GI+ Y + P+ +++++ + H Y +
Sbjct: 180 VLGVVLTMGMINEPPEILGHHIGAALVGTFVGILFCYGIFGPMAAKLENHAHEMHAYYNV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K+ + A + G+ P +A+EYGR+ +P + RP+
Sbjct: 240 IKEGVAAAIRGSTPIIAVEYGRRAIPHAFRPT 271
>gi|145297472|ref|YP_001140313.1| LafT [Aeromonas salmonicida subsp. salmonicida A449]
gi|142850244|gb|ABO88565.1| LafT [Aeromonas salmonicida subsp. salmonicida A449]
Length = 301
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 149/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IGL + +C++GGF GG P L QP E++I+ GA +G + N +V+ +
Sbjct: 17 MQKQIGLGVIFICVLGGFMMAGGKPIALWQPAELIIIIGAAVGSMFLGNSKEVMHEMWRQ 76
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F ++ Y ++L L++ L+ + + HI++P S++F P + E+
Sbjct: 77 MKQCFKSNKDEKEIYRELLTLMHQLLEETRNKGMKALDEHIENPQQSSVFLMYPQISEDP 136
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D +R++ +G +E++ ++++EI I + LKP HA+ GE+ P GI+ A
Sbjct: 137 QLLGFIIDNLRLLGMGKITPHELDTMLEQEIMAIEEDMLKPAHALHKTGEACPGFGILAA 196
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L +G + +L GT +GI L Y L P+++ ++ ++ L +
Sbjct: 197 VMGIIITMQQLDGPLSNIGVHVAAALVGTFIGIFLCYCLLEPISNAMEEMVKRRIGLLMC 256
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K LIA + G P ++++ GRK+L +PS
Sbjct: 257 IKSILIAQLRGKTPLISVDSGRKMLEPDVKPS 288
>gi|22758826|gb|AAN04224.1| LafT [Aeromonas salmonicida]
Length = 301
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 149/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IGL + +C++GGF GG P L QP E++I+ GA +G + N +V+ +
Sbjct: 17 MQKQIGLGVIFICVLGGFMMAGGKPIALWQPAELIIIIGAAVGSMFLGNSKEVMHEMWRQ 76
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F ++ Y ++L L++ L+ + + HI++P S++F P + E+
Sbjct: 77 MKQCFKSNKDEKEIYRELLTLMHQLLEETRNKGMKALDEHIENPQQSSVFLMYPQISEDP 136
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D +R++ +G +E++ ++++EI I + LKP HA+ GE+ P GI+ A
Sbjct: 137 QLLGFIIDNLRLLGMGKITPHELDTMLEQEIMAIEEDMLKPAHALHKAGEACPGFGILAA 196
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L +G + +L GT +GI L Y L P+++ ++ ++ L +
Sbjct: 197 VMGIIITMQQLDGPLSNIGVHVAAALVGTFIGIFLCYCLLEPISNAMEEMVKRRIGLLMC 256
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K LIA + G P ++++ GRK+L +PS
Sbjct: 257 IKSILIAQLRGKTPLISVDSGRKMLEPDVKPS 288
>gi|89069808|ref|ZP_01157143.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
gi|89044609|gb|EAR50725.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
Length = 289
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 148/266 (55%), Gaps = 3/266 (1%)
Query: 15 IGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG+ GG I+++ PFE++++ GA +G FV++N + IK + + ++F
Sbjct: 15 FGGYLLAGGKMGIILKSLPFEMIMIGGAAIGAFVISNDVPAIKHTLKDVGKVFKGPKWKA 74
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ Y D+L LL+ L+ + + + E E HI+ P +S IF P + + E ICD +R
Sbjct: 75 EDYRDLLCLLFELI-RVARNNPVEIEEHIETPESSAIFGRYPKISADGEALALICDTLRS 133
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ +++E ++++ ID L+ KL HA+ + + LPA+GIV A+LG+IK M ++
Sbjct: 134 ASMNYDDPHQVEEVLEKRIDASLHHKLHSTHALQTIADGLPALGIVAAVLGVIKTMASID 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
Q P++LG IG +L GT LG+ L+Y L P +++KS Y ++++ L+A +
Sbjct: 194 QPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAAKVKSVIEDDMHFYRLIREVLVANLYQH 253
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQ 278
+ IE GR+ P RPS V +
Sbjct: 254 ATNICIEVGRQNTPGQYRPSFSEVEE 279
>gi|315499554|ref|YP_004088357.1| mota/tolq/exbb proton channel [Asticcacaulis excentricus CB 48]
gi|315417566|gb|ADU14206.1| MotA/TolQ/ExbB proton channel [Asticcacaulis excentricus CB 48]
Length = 288
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 160/274 (58%), Gaps = 2/274 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + C+ G + GG+ P + +E++ + GA + +++N L IK G
Sbjct: 1 MFQIIGIVVLFACVFGSYLLSGGSMAPILHSLAYEMMGIGGAAVASVLISNDLHTIKGMG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++FG Y D+L LL+ L +K E+HI+ P S+IF+ P +++
Sbjct: 61 GGMGKVFGGAKWKPSDYRDLLSLLFQLTKTMKAKGVIALESHIEKPQESSIFSRYPKIMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E + P HA+ + ++LPA+GIV
Sbjct: 121 DHFAIDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEAMHPAHAMQSVADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG +++ P++LG IG +L GT LG++L+Y L P +++ ++ Y
Sbjct: 181 IAVLGVIKTMGAITEPPEVLGGMIGGALVGTFLGVMLAYGLVGPFATRMNGVVEEEAAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
I++ L+A+++G Q+++E GR +P +PS
Sbjct: 241 KIIQAVLVAHLHGNAAQISVEIGRGNIPSGAQPS 274
>gi|42524630|ref|NP_970010.1| flagellar motor protein MotA [Bdellovibrio bacteriovorus HD100]
gi|39576840|emb|CAE78069.1| flagellar motor protein [Bdellovibrio bacteriovorus HD100]
Length = 265
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 138/246 (56%)
Query: 31 PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLK 90
P E++I+ GA LG +++ANP+KVIK ++ K + Y ++L++++ L +
Sbjct: 9 PLELMIIGGAALGAYIIANPMKVIKAGFKMSIKAMTAKGPQKQDYVELLQMMFQLFQAFR 68
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
K E HI++P S IF + P+ + N+ F+CD M++ + Y++++L+D +
Sbjct: 69 KEGPQGIEKHIEEPDKSDIFKAYPSFMHNHHAVHFLCDTMKITLSAEMSPYDVDDLLDAD 128
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTL 210
I I +E+ HA+ + + P +GIV A+LGI+K M +L+ + +G + +L GT+
Sbjct: 129 IKAIHHEEHMAVHAVQTVADGFPGLGIVAAVLGIVKTMAHLTDGVEKIGALVASALVGTM 188
Query: 211 LGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
LG+ +Y L P +++ + + R +K A++A GA P V +EY R+ + ER
Sbjct: 189 LGVFGAYGLIGPTATKMGADIDAEGRYLGCIKAAMVALQRGAPPIVCVEYARRSIMPEER 248
Query: 271 PSIEIV 276
PS E V
Sbjct: 249 PSFEEV 254
>gi|307293779|ref|ZP_07573623.1| chemotaxis MotA protein [Sphingobium chlorophenolicum L-1]
gi|306879930|gb|EFN11147.1| chemotaxis MotA protein [Sphingobium chlorophenolicum L-1]
Length = 287
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 152/276 (55%), Gaps = 4/276 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + + GGF GG+ P + P E++I+ GA +G ++ N +K G
Sbjct: 1 MFAIIGLVVLLAMVFGGFIFTGGDIGPVLHALPHEMLIIGGAAVGALIIGNSGADLKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F + + D + L+ LM L+ E HI+DP +STIF+ P ++
Sbjct: 61 GGLGKVFKGPKYKKQDFLDCIFLVSKLMKTLRVEGPVALEPHIEDPASSTIFSEYPRLMG 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ L I D +R+++V G + +E +MD + +E LKP + + ++LPA+G
Sbjct: 121 DKTLIHLISDTLRLVVVSSGTLDPHAVEEVMDNALKTHHHESLKPADNLQGLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P +LG IG +L GT LG++L+Y + NP ++ ++
Sbjct: 181 IVAAVLGVVKTMGSIDQPPAVLGAMIGSALVGTFLGVLLAYGMVNPFANRCRAVIEADGS 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+Y +VK+ ++A ++G + IE R L + +P+
Sbjct: 241 MYHVVKQIIVASLHGHPQPLVIEAARSSLTHANQPA 276
>gi|260429107|ref|ZP_05783084.1| lateral flagellar motor protein MotA [Citreicella sp. SE45]
gi|260419730|gb|EEX12983.1| lateral flagellar motor protein MotA [Citreicella sp. SE45]
Length = 289
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 150/275 (54%), Gaps = 3/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + GG+ GG I+++ PFE++++ GA LG F++ N V+K +
Sbjct: 1 MLGIIGIVVIFAMVFGGYVLAGGKMGIILKALPFEMMMIGGAALGTFLLGNDGGVVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F Y D+L LL+ L+ L + S E H++ P S+IF+ P +
Sbjct: 61 KDISKVFKGTKWKPGDYKDLLCLLFELI-RLARQSPVAIEEHVETPGESSIFSKYPKIQG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ICD MR + + +++E ++D+ I+ + + +L HA+ ++LPA+GIV
Sbjct: 120 DKVAIELICDTMRSMSMNYDDPHQVEEVLDKRIEALQHHRLHSSHALQSTADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M + Q P++LG IG +L GT LG+ L+Y P ++KS + Y
Sbjct: 180 AAVLGVIKTMAAIDQPPEVLGKMIGGALVGTFLGVFLAYGFFGPFAGKVKSVVEEDLHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++++ L+A ++ + IE GR+ P RPS
Sbjct: 240 QLIREVLVANLHNHATNICIEVGRQNTPAHFRPSF 274
>gi|294013094|ref|YP_003546554.1| chemotaxis MotA protein [Sphingobium japonicum UT26S]
gi|292676424|dbj|BAI97942.1| chemotaxis MotA protein [Sphingobium japonicum UT26S]
Length = 287
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 152/276 (55%), Gaps = 4/276 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + + GGF GG+ P + P E++I+ GA +G ++ N +K G
Sbjct: 1 MFAIIGLVVLLAMVFGGFIFTGGDIGPVLHALPHEMIIIGGAAVGALIIGNSGSDLKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F + + D + L+ LM L+ E HI+DP +STIF+ P ++
Sbjct: 61 GGLGKVFKGPKYKKQDFLDCIFLVSKLMKTLRVEGPVALEPHIEDPASSTIFSEYPRLMG 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ L I D +R+++V G + +E +MD + +E L+P + + ++LPA+G
Sbjct: 121 DKTLIHLISDTLRLVVVSSGTLDPHAVEEVMDNALKTHHHEALRPADNLQGLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P ILG IG +L GT LG++L+Y + NP ++ ++
Sbjct: 181 IVAAVLGVVKTMGSIDQPPAILGGMIGSALVGTFLGVLLAYGMVNPFANRCRAVIEADGS 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+Y +VK+ ++A ++G + IE R L + +P+
Sbjct: 241 MYHVVKQIIVASLHGHPQPLVIEAARSSLTHANQPA 276
>gi|329850379|ref|ZP_08265224.1| chemotaxis protein motA [Asticcacaulis biprosthecum C19]
gi|328840694|gb|EGF90265.1| chemotaxis protein motA [Asticcacaulis biprosthecum C19]
Length = 290
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 161/275 (58%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G + GGN P I P E++ + G+ + ++ N L +K G
Sbjct: 1 MFQIIGIVLLFGMVFGSYMLAGGNFAPIIEAAPHELMAIGGSAVAASLIGNSLTTLKGMG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++FG Y D+L LL++L +K E+HI+ P++S+IF P +++
Sbjct: 61 GGMGKVFGGPKWKASDYRDLLSLLFLLTKTMKSKGVIALESHIEKPHDSSIFKRFPKIVK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E L P HA+ +M ++LPA+GIV
Sbjct: 121 DHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEALHPAHALQNMADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P++LG IG +L GT +G+ L+Y L P +++ ++ Y
Sbjct: 181 AAVLGVIKTMGSITEPPEVLGAMIGGALVGTFMGVFLAYGLVGPFATRMSGVIEEESAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
I++ L+A+++G Q+++E GR +P +PS
Sbjct: 241 KIIQSVLVAHLHGNAAQISVEIGRGSIPTPSQPSF 275
>gi|94495403|ref|ZP_01301983.1| flagellar motor protein [Sphingomonas sp. SKA58]
gi|94424791|gb|EAT09812.1| flagellar motor protein [Sphingomonas sp. SKA58]
Length = 287
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 155/291 (53%), Gaps = 8/291 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + + GGF GG+ P + P E++I+ GA +G ++ N +K G
Sbjct: 1 MFAIIGLVVLLGMVFGGFIFTGGDIGPVLHALPHEMLIIGGAAVGALIIGNSGADLKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F A + + D + L+ LM L+ E HI+DP S IF P +++
Sbjct: 61 GGLAKVFKGPAYKKQDFLDCIFLVSKLMKTLRVEGPVALEPHIEDPGTSPIFAEYPKLMK 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ L I D +R+++V G + +E +MD + +E LKP + + ++LPA+G
Sbjct: 121 DKTLIHLISDTLRLVVVSSGTLDPHAVEEVMDNSLKTHHHEALKPADNLQGLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P +LG IG +L GT LG++L+Y + NP ++ ++ +
Sbjct: 181 IVAAVLGVVKTMGSIDQPPSVLGAMIGSALVGTFLGVLLAYGMVNPFANRCRTVIEQDGA 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+Y +VK+ +IA ++G + IE R L + +P EV NK
Sbjct: 241 IYHVVKQIIIASLHGHPQPLVIEAARSSLIHANQPGF----AEVFDGMRNK 287
>gi|301643538|ref|ZP_07243581.1| flagellar motor protein MotA [Escherichia coli MS 146-1]
gi|301078089|gb|EFK92895.1| flagellar motor protein MotA [Escherichia coli MS 146-1]
Length = 265
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 133/251 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNG 251
V+ L+A G
Sbjct: 241 VRTVLVAQAGG 251
>gi|71906361|ref|YP_283948.1| chemotaxis motA protein [Dechloromonas aromatica RCB]
gi|71845982|gb|AAZ45478.1| chemotaxis motA protein [Dechloromonas aromatica RCB]
Length = 285
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 158/280 (56%), Gaps = 1/280 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G ++ IL G YA+ G+ L P E V + G +G FV AN +KVIK + +
Sbjct: 1 MFLIVG-YVIILAAALGTYAIHGSLLALWVPTEYVAIVGLTIGYFVAANNIKVIKATVAA 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ I + Y D L +L+ ++ ++K E I++P S IF+ P ++ ++
Sbjct: 60 VPGILKGSKFNKAFYIDTLAMLFEILAKVRKEGLMSIEGDIENPDASPIFSKYPNLVHDH 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+RM++ GN + EIE+LMD E++ +E +P H +S + ++PA GIV A
Sbjct: 120 HIMEFVTDYLRMMVGGNLNTVEIESLMDVELETHHHEAAEPGHVVSSIAGAVPAFGIVVA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG IG +L GT LGI++SY P+ ++ + +Y
Sbjct: 180 VMGVVNVMGSVGSPPAVLGKMIGGALVGTFLGILISYGFVEPVAKLMEQKANEGSTIYKC 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K L+A M+G PQVAIE+GRK + RP + +E+
Sbjct: 240 IKMVLLASMSGYAPQVAIEFGRKTIDSGSRPGFVELEEEL 279
>gi|146278782|ref|YP_001168941.1| flagellar motor protein MotA [Rhodobacter sphaeroides ATCC 17025]
gi|145557023|gb|ABP71636.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 289
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 155/275 (56%), Gaps = 3/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ GG I+++ PFE++++ GA +G F+++N L +K +
Sbjct: 1 MFGIVGVIVLFVMVFGGYMMAGGKIGIILKALPFEMIMIGGAAVGSFLLSNDLFAVKQTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F Y D+L LL+ L+ + K + E HI++P S +F+ P +
Sbjct: 61 KDVGKVFKGPRWKPADYRDLLCLLFELV-RIAKVNPVGLEEHIENPEASPVFSRYPKIQH 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+++ ICD +R + +++E ++D+ ++ + L HA+ M ++LPA+GIV
Sbjct: 120 DHDAIELICDTLRAASMNYDDPHQVEEVLDKRVEKAQHHALHSSHALQSMADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P+ILG IG +L GT LG+ L+Y L P +++++ + Y
Sbjct: 180 AAVLGVIKTMSSIDQPPEILGKMIGGALVGTFLGVFLAYGLVGPFATRVRAVIEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++++ LIA ++ + IE GR+ P RPS
Sbjct: 240 NLIREVLIANLHNHPANMCIEVGRQNTPHHVRPSF 274
>gi|194364217|ref|YP_002026827.1| flagellar motor protein MotA [Stenotrophomonas maltophilia R551-3]
gi|194347021|gb|ACF50144.1| flagellar motor protein MotA [Stenotrophomonas maltophilia R551-3]
Length = 284
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 155/280 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I+ ++GG+ G L QP+E+VI+ GA LG F++ P K +K + +
Sbjct: 1 MLIIVGFLVVIISVLGGYLGAHGRLGALWQPYELVIIGGAALGAFLVGTPAKTVKQTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F Q Y DVL L+Y L+ ++ E+H++ P S +F + P V ++
Sbjct: 61 MVGVFKGPRYKQQDYIDVLSLVYELLNKARREGFMALEDHVERPAESALFGNYPKVQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R++I N +E+E L++ E++ E + P ++ + + LP GIV A
Sbjct: 121 HLIDFITDCLRLMIGSNIEPHELEPLLELELEKHHAEAMAPSQVLTKVADGLPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ +G + +L GT LGI+L Y P+ S +++ + R+Y
Sbjct: 181 VLGIVITMGSIGGDIVEVGGHVAGALVGTFLGILLGYGFVGPMASAMEARAEQDSRIYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
VK AL+A + G P++A+E+ RK LP + RP+ Q +
Sbjct: 241 VKTALLACLRGYNPKIALEFARKTLPSNVRPAFSDFEQHL 280
>gi|114765231|ref|ZP_01444363.1| flagellar motor protein [Pelagibaca bermudensis HTCC2601]
gi|114542366|gb|EAU45394.1| flagellar motor protein [Roseovarius sp. HTCC2601]
Length = 298
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 146/274 (53%), Gaps = 2/274 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ I+GL + + GGF GG I++ PFE +++ GA +G FV+AN + VIK S
Sbjct: 11 MTMILGLALVFGLVFGGFMLSGGKMDIVLHALPFEGMMIGGAAIGAFVIANSVDVIKKSA 70
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++++ Y D+L L+Y L K ++HI+ P +S IF P +
Sbjct: 71 GGIVKVLKGPRWKAKDYGDLLNLMYELTRIYKAKGILALDSHIESPSDSDIFNRYPRIAA 130
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ I D RM+ + Y E++++ +I +E L HAI + + LPAIGIV
Sbjct: 131 DHFAIDLIRDSFRMLSMQFDDKYATEDVINRKIKKHHHESLASVHAIQQVADGLPAIGIV 190
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P+ILG IG +L GT LG+ L+Y + P++ ++K + Y
Sbjct: 191 AAVLGVIKTMSSIDQPPEILGKMIGGALVGTFLGVFLAYCMVQPISGRLKQIEEEDGAFY 250
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+I++ +A + P + +E GR +P +P
Sbjct: 251 MIIRDIFVAMVADHPPSICVEIGRGNIPTRMQPD 284
>gi|304412489|ref|ZP_07394095.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307307148|ref|ZP_07586886.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|304349131|gb|EFM13543.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306910387|gb|EFN40818.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 285
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 146/272 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS ++GL I + + GG+ GG L QP EI+I+ GAG+G ++ANP V+K+
Sbjct: 1 MSKLVGLLIILASVFGGYVWAGGALSALWQPAEILIIMGAGVGALIIANPQSVLKEMFEQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E+F + Y + L+ LM ++ + H+++P S+IF P VL +
Sbjct: 61 LKELFNKGKEDPELYPQLFPLMGTLMAQIQSQGLKVLDEHLENPQQSSIFLMYPAVLNHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G +++E++++EEI I ++L+P A S +GE++P GI+ A
Sbjct: 121 NVLQFLIDNLRVQSIGKISPHDLEHILEEEIHRIEEDRLRPSEAFSKVGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M N+ ++G + +L GT +GI Y +P++ ++ ++
Sbjct: 181 VLGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPMSKALEHLVDRKSAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ L+ + G P +AI+ GRK + RPS
Sbjct: 241 IAAILVTFSKGKPPMMAIDAGRKQIQSENRPS 272
>gi|315126000|ref|YP_004068003.1| LafT [Pseudoalteromonas sp. SM9913]
gi|315014514|gb|ADT67852.1| LafT [Pseudoalteromonas sp. SM9913]
Length = 287
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 158/283 (55%), Gaps = 4/283 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL + + ++GGF GGN + QP+E +I+ GAGLG ++ N V+ + +S
Sbjct: 1 MQRVIGLIVVLATVLGGFAFAGGNIATMWQPYEFLIIFGAGLGALIVGNSKYVLTEM-LS 59
Query: 61 LLEIFGYKALGQDT---YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
L+ G DT Y D+L ++Y L+ + + H+++P S+IF + P V
Sbjct: 60 QLKYQFISGKGTDTSELYHDLLLVIYSLLDLARVKGIKGLDEHVENPETSSIFLAYPKVY 119
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
E +L TFICD +R+ +G S++ + ++++EI I ++LKP H+++++ E++P GI
Sbjct: 120 EFPQLVTFICDNLRLFSMGKINSHDFDAMLEQEIYTIEEQRLKPSHSLANIAEAMPGFGI 179
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+ A+ GII M +L +G + +L GT +GI Y L PL S ++ KQ +
Sbjct: 180 LAAVGGIIITMQHLDGPLSEIGYHVAAALVGTFIGIFACYCLIAPLASAMEQYVKKQVAM 239
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ V+ L+A+ G +P VA + GRK++ +P+ + + +
Sbjct: 240 FECVRAMLVAHAKGHVPIVATDSGRKLINEEIKPTFTTMEEWI 282
>gi|134094522|ref|YP_001099597.1| proton conductor component of motor, torque generator
[Herminiimonas arsenicoxydans]
Length = 208
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 123/204 (60%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ LL+ ++ ++K E ID P S IFT PTVL ++ + FI DY+R+++ GN
Sbjct: 1 MTLLFEILTKVRKEGLMSIEGDIDAPEESAIFTKYPTVLADHHIIEFITDYLRLMVSGNM 60
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+++IENLMD EID E P H I+ MG+ LPA GIV A++G++ M ++ P L
Sbjct: 61 DAFQIENLMDNEIDTHHAEGEIPVHCIAKMGDGLPAFGIVAAVMGVVHTMASVGLPPAEL 120
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I +L GT LGI+L+Y +PL+S ++ + +++ +K L+A +NG P +A+
Sbjct: 121 GILIANALVGTFLGILLAYGFVSPLSSTLEQKLHESSKVFQCIKVTLLASLNGYAPALAV 180
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQ 282
E+GRKVL +ERPS + + Q
Sbjct: 181 EFGRKVLFSTERPSFSELEDHIKQ 204
>gi|226225702|ref|YP_002759808.1| chemotaxis MotA protein [Gemmatimonas aurantiaca T-27]
gi|226088893|dbj|BAH37338.1| chemotaxis MotA protein [Gemmatimonas aurantiaca T-27]
Length = 285
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 147/273 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL + +IGG+ G +L Q E +I+ GAGLG ++ANP V+K
Sbjct: 1 MFVIIGLVVVFGSVIGGYVMHHGQIAVLFQINEFIIIGGAGLGTLIIANPPAVLKACVAQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G Y ++L++LY + +K E HI+ P +S IF P+ N+
Sbjct: 61 TLGLLKPNPYGASAYAELLQVLYEVFQKARKDGLVGLEAHIEAPESSDIFQKYPSFTNNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +CD +++++ G + + ++D +++ +E + HAI+ +G+++P GIV A
Sbjct: 121 HAVSLLCDTLKVLLTGTVEDHNLAEILDVDLEKHHHEGMLAPHAITTVGDAMPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I MG++ + +G + +L GT +GI+L+Y + P+ +++ +H +
Sbjct: 181 VLGVIITMGSIGGAASEIGEKVAAALVGTFVGILLAYGVFGPVAKAMENRLHAEHDYMLC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ AL+++ G P A+E+ R+ + ERPS
Sbjct: 241 IRTALLSFARGDAPMTAVEFSRRNIEPHERPSF 273
>gi|239906205|ref|YP_002952944.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239796069|dbj|BAH75058.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 281
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 146/272 (53%), Gaps = 1/272 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL + I + G+ GG +L+QP E VI+ GA LG ++ + +
Sbjct: 1 MIVMVGLLVVIASVCLGYLMEGGVFAVLVQPAEWVIIIGAALGAMLVGSTRNALTLIVKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + +G+D Y + L L L+ +++ E I+ P S IF + ++
Sbjct: 61 LPKALFPAHIGRDHYLEALACLARLLGKIRREGLMSIEGDIEHPETSPIFAKATLLSKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICD MR+ +V + + E+E LMD ++ I + P H + + ESLP +GIV A
Sbjct: 121 AALAFICDTMRVYLV-SGDAQELEQLMDLDLAAIHLQASSPAHNLGKVAESLPGLGIVAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG +SQ P++LG +IG +L GT LG++L Y PL +++ +++ + +
Sbjct: 180 VLGVVLTMGKISQPPEVLGHSIGAALVGTFLGVLLCYGFVGPLAGNLENQAMERQTYFSV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ + GA P +A+EYGR+ +P + RP+
Sbjct: 240 IRAVIAGAARGATPLIAVEYGRRAIPEALRPN 271
>gi|84502393|ref|ZP_01000529.1| chemotaxis MotA protein [Oceanicola batsensis HTCC2597]
gi|84389205|gb|EAQ02002.1| chemotaxis MotA protein [Oceanicola batsensis HTCC2597]
Length = 288
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 146/275 (53%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ +GL + + GGF GG I++ PFE +++ GA LG FV+AN VIK SG
Sbjct: 1 MTMFLGLAMVFGLVFGGFMLSGGKMDIVLHALPFEGMMIGGAALGSFVIANSFTVIKASG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++ Y D+L L+Y L K ++HI++P S IF P +L+
Sbjct: 61 KGVGKVIKGPKWKAKDYNDLLALMYELTRLYKAKGVLALDDHIENPEGSEIFGRYPRILK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ I D RM+ + Y E++++ +I +E L+ HAI M + LPAIGIV
Sbjct: 121 DHFAIDLIRDSFRMLSMQFDDKYATEDVINRKIKKHHHESLEAAHAIQTMADGLPAIGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P++LG IG +L GT LG+ L+Y + P++ ++ + Y
Sbjct: 181 AAVLGVIKTMSSIDQPPEVLGAMIGGALVGTFLGVFLAYCMVQPISGRLTQIEDEDGAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+++ +A ++ P + +E GR +P +P
Sbjct: 241 HVIRDIFVAMVSNQPPNICVEIGRGNIPTRMQPDF 275
>gi|308050007|ref|YP_003913573.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307632197|gb|ADN76499.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 285
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 143/273 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M GL I + GGF G L QP E+VIV GA +G ++++NP+ V++D+
Sbjct: 1 MLKFFGLLTVIASVFGGFLLAKGQLAALWQPAEVVIVMGAAIGSYIISNPMPVLRDTLAQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L I + + Y + L+ LM ++ + HI+ P+ S+IF + P VL
Sbjct: 61 LRGIVTSEKEDPELYPQLFGLMNTLMNQIRMNGLKVLDEHIEKPFESSIFLTYPAVLRQP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +F+ D +R+ +G ++E ++LM+EEI + ++++P HA+ GE+LP GI+ A
Sbjct: 121 MLLSFLVDNLRLQSMGKLTAHEFQHLMEEEIHRLQEDRMRPSHAMHRTGEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII MG + ++G + +L GT +G+ Y L P S + ++
Sbjct: 181 VMGIIITMGAIDGPLTMIGVHVAAALVGTFMGVFACYCLFEPAASAMAHLIDRRIAQLHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L+A G P +A++ GR+++ RPS
Sbjct: 241 VKAILVAQQAGKQPLLALDAGRRLIQEENRPSF 273
>gi|296531731|ref|ZP_06894558.1| chemotaxis protein MotA [Roseomonas cervicalis ATCC 49957]
gi|296267939|gb|EFH13739.1| chemotaxis protein MotA [Roseomonas cervicalis ATCC 49957]
Length = 297
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 161/289 (55%), Gaps = 2/289 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPF--EIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + GG+ GG +++ E++I+ G+G ++ + ++ +
Sbjct: 1 MIQIVGILGVFVAVFGGYLIAGGKMGVILGALGPELMIIGGSGFMTLLIGGDMALVTKTM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
S ++F + + + D+L LLY+L+ +K + E HI+ P S IF+ P +L
Sbjct: 61 KSFGKVFKGPSWNRKDFSDLLCLLYLLLRTHQKEGAAKLEKHIEKPEASAIFSRYPRLLR 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ L+ ICD +R I + N + + +M+ I+ E +KP AI M ++ PA+GIV
Sbjct: 121 DPALSGLICDTLRTITLNNKDPHRVGEMMETAIEKRHSENIKPAKAIQTMADAFPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IKAMG +S+SP++LG IG +L GT LG+ LSY L P++ ++K ++ ++
Sbjct: 181 AAVLGVIKAMGAISESPEVLGRMIGAALVGTFLGVFLSYGLVGPMSGRLKLILEEERKML 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+ + + +Y+ PQ+ +E GR+ +P +PS + + +++ + K
Sbjct: 241 DVTRAVITSYLENLSPQICVEVGRQSVPSKLQPSFDQMEEQLREAGRVK 289
>gi|218886186|ref|YP_002435507.1| flagellar motor protein MotA [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218757140|gb|ACL08039.1| flagellar motor protein MotA [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 281
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 151/272 (55%), Gaps = 1/272 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL + I+ G+ G ++L QP E++I+ GA +G F++++ + +
Sbjct: 1 MFAIIGLVVVFGSILTGYLMSHGVLHVLWQPAELIIILGAAIGAFIVSSTKYSLGLVLKN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G + + Y DVL LL L + + E I+ P S+IF P + ++
Sbjct: 61 LKLVLGDPGMSKAKYLDVLGLLNSLFVKMHREGVISIEQDIEKPEGSSIFNKYPAIAKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI D +R+ + EI++LM+ ++ + E+ H+I M ESLP +GIV A
Sbjct: 121 HTVHFIGDTLRVYLT-TGDPNEIDSLMEVDMKSMHEEESIAPHSIGRMAESLPGMGIVAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG +S+ P++LG IG +L GT +GI+ Y + P+ ++I+ + H + +
Sbjct: 180 VLGVVLTMGKISEPPEVLGHHIGAALIGTFIGILFCYGVFGPMGAKIEQANHEHHMYFAV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K+A+ A + G+ P +A+EYGR+ +P + RP+
Sbjct: 240 IKEAVAAAIRGSTPIIAVEYGRRAIPHTFRPT 271
>gi|167626172|ref|YP_001676466.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167356194|gb|ABZ78807.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 285
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 149/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS ++GL I +L + GG+ GG L QP EI+I+ GAG+G ++ANP V+ +
Sbjct: 1 MSKLLGLVIILLSVFGGYVWAGGALISLWQPAEILIIFGAGIGALIIANPKPVLIEMYEQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E+ + + Y + L+ +LM ++ ++H++ P S++F P VLE+
Sbjct: 61 LKELVRVEREDPELYPQLFGLMNMLMAQIQSQGLRVLDDHVEKPRESSLFLMYPVVLEHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G +++E++++EEI I ++++P HA + + E++P GI+ A
Sbjct: 121 NVLNFLIDNLRLQSIGKLSPHDLEHMLEEEIHRIDEDRMRPSHAFNKVAEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M N+ ++G + +L GT +GI Y + +PL+ ++ +Q
Sbjct: 181 VMGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCIFDPLSKAMEHLVERQSAQMRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V L A+ G P +AI+ GRK + RP+
Sbjct: 241 VAAMLTAFAKGKPPMLAIDAGRKQIQSENRPT 272
>gi|327478800|gb|AEA82110.1| flagellar motor protein MotA [Pseudomonas stutzeri DSM 4166]
Length = 290
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 159/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G FI I C++GG+ G+ +L QP E+VI+ GA LG V+ NP +V+ +
Sbjct: 1 MQKVLGAFIIIGCVLGGYAMANGDMRVLWQPAEVVIILGAALGSLVVGNPKEVLIEMLHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F Y+ G++ +L LLY L+ + G ++HI++P S +F P +L+
Sbjct: 61 IKGVFAYQRRGEEFQRQLLMLLYELLEMVDVGGLKVLDSHIEEPEQSDLFVRYPLILQEK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G ++E+E +++E++ + + ++P ++ +GE++P GI+ A
Sbjct: 121 NLMAFIADNFRLMAMGKITAHELEGFLEQELEAMEHALMQPSRSLFKIGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
I+GII MG++ S +G + +L GT LGI Y L PL++ + +
Sbjct: 181 IMGIIITMGSIGGSVAEIGAHVAAALVGTFLGIFFCYCLMEPLSNAMGQRVKTELSALEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V+ L+A++ G +A++ GRK++ +P+ + V QY + A+
Sbjct: 241 VRTTLVAHLAGKPTLLAVDAGRKLIEQDVKPAFRQLEVWVNQYEEERDAA 290
>gi|225164038|ref|ZP_03726323.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801344|gb|EEG19655.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 289
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 145/274 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +IG + + +GGF GGNP +L+ E V++ G LG ++A+P V++D
Sbjct: 1 MTILIGALVVLSATLGGFMLAGGNPLVLLHLSEYVVIIGVALGLLIIASPPAVMRDIIRK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E + + ++ Y D+LKLLY L ++ E H+ P S IF PT +
Sbjct: 61 VGEAIRGRRMSREDYFDLLKLLYELFVLGRRNGLIALEEHVSAPEQSAIFQKYPTFALDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + +R +I G + ++E L+ E+ E P H + +G+SLP IGIV A
Sbjct: 121 ERREFLMNALRPVIDGRIKPDQLEELLGAELRAKAEEAEHPVHLLQLVGDSLPGIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M +++ P+++G + +LTGTLLG+ +Y NP+ +++K + +
Sbjct: 181 VLGIINTMASIADGPEVVGLRVAAALTGTLLGVFFAYGFVNPMANRVKLNNITNQQYLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ +++ + G P ++E R+ L S +P E
Sbjct: 241 IMISVVGFAKGLAPITSVEVARRSLNSSVQPGAE 274
>gi|16125003|ref|NP_419567.1| flagellar motor protein MotA [Caulobacter crescentus CB15]
gi|221233724|ref|YP_002516160.1| flagellar motor protein MotA [Caulobacter crescentus NA1000]
gi|13421983|gb|AAK22735.1| chemotaxis MotA protein [Caulobacter crescentus CB15]
gi|220962896|gb|ACL94252.1| chemotaxis motA protein [Caulobacter crescentus NA1000]
Length = 288
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 165/285 (57%), Gaps = 4/285 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G + GG ++I P E++ + GAG+ F++ N + VIK +
Sbjct: 1 MFQIIGIVLLFAMVFGSYIMAGGKMDVIIHAAPHELMAIGGAGVAAFLIGNSVTVIKATL 60
Query: 59 VSLLEIF-GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF G K QD Y D+L LL++L +K E HI+ P+ STIF+ P +
Sbjct: 61 GGFGTIFKGPKWKAQD-YRDLLSLLFLLTKTMKSKGVIALEAHIEKPHESTIFSRYPKIA 119
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
++ FICD +RM+ + +++E+ M+++++ +E HA++ + + LPA+GI
Sbjct: 120 HDHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEAHGAAHALTQLSDGLPALGI 179
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
V A+LG+IK MG++++ P +LGT IG +L GT +G+ ++Y L P+ +++ + H
Sbjct: 180 VAAVLGVIKTMGSITEPPAVLGTMIGGALVGTFMGVFMAYGLVGPMATRLGGVLDEDHNF 239
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
Y I++ L+A+++G Q+++E GR +P + +PS + + + Q
Sbjct: 240 YKIIQAVLVAHLHGNAAQISVEIGRGNVPSAYQPSFAELEEALSQ 284
>gi|83944200|ref|ZP_00956656.1| Flagellar motor protein MotA [Sulfitobacter sp. EE-36]
gi|83955099|ref|ZP_00963755.1| Flagellar motor protein MotA [Sulfitobacter sp. NAS-14.1]
gi|83840428|gb|EAP79601.1| Flagellar motor protein MotA [Sulfitobacter sp. NAS-14.1]
gi|83845067|gb|EAP82948.1| Flagellar motor protein MotA [Sulfitobacter sp. EE-36]
Length = 289
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 151/275 (54%), Gaps = 2/275 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ I+G + + + GG+ GG+ I+ PFE +++ GA LG F+ AN I +G
Sbjct: 1 MTIILGFVVVMGMVFGGYMLSGGDMGIITHALPFEGMMIGGAALGSFIAANSFANIAGAG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L++ F Y D+L L+Y L ++ + HI++P S+IF+ P + +
Sbjct: 61 RALVKAFKGPKWNSGDYVDLLNLMYTLARKYQQNGMLALDEHIENPQESSIFSQYPKLQK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ I D RM+ + Y+ E++++ ++ +E L H ++ + ++LPAIGIV
Sbjct: 121 DHFAIDLITDSFRMLAMQFDDPYQAEDVINRKLKKHHHEALVAPHGLTTVSDALPAIGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ + P +LG IG +L GT LG+ L+Y +P+ +++++ + Y
Sbjct: 181 AAVLGVIKTMSSIDKPPAVLGAMIGGALVGTFLGVFLAYLFVSPVANRLQAIEEQDGIYY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+++ IA ++G P + E GR +P S +PS
Sbjct: 241 AVIRDIFIAILHGHSPAICTEIGRGNIPTSLQPSF 275
>gi|190572620|ref|YP_001970465.1| flagellar motor protein MotA [Stenotrophomonas maltophilia K279a]
gi|190010542|emb|CAQ44151.1| putative chemotaxis protein MotA [Stenotrophomonas maltophilia
K279a]
Length = 284
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 155/280 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I+ +IGG+ G L QP+E+VI+ GA LG F++ P K +K + +
Sbjct: 1 MLIIVGFLVVIISVIGGYLGAHGRLGALWQPYELVIIGGAALGAFLVGTPAKTVKQTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F Q Y DVL LLY L+ ++ E+H++ P S +F + P V ++
Sbjct: 61 MVGVFKGPRYKQQDYIDVLSLLYELLNKARREGFMALEDHVERPAESALFGNYPKVQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R++I N +E+E L++ E++ E + P ++ + + LP GIV A
Sbjct: 121 HLIDFITDCLRLMIGSNIEPHELEPLLELELEKHHAEAMAPSQVLTKVADGLPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ +G + +L GT LGI+L Y P+ + +++ + R+Y
Sbjct: 181 VLGIVITMGSIGGDIVEVGGHVAGALVGTFLGILLGYGFVGPMAAAMEARAEQDSRIYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
VK AL+A + G P++A+E+ RK LP + RP+ Q +
Sbjct: 241 VKTALLACLRGYNPKIALEFARKTLPSNVRPAFSDFEQHL 280
>gi|310816841|ref|YP_003964805.1| flagellar motor protein MotA [Ketogulonicigenium vulgare Y25]
gi|308755576|gb|ADO43505.1| flagellar motor protein MotA [Ketogulonicigenium vulgare Y25]
Length = 288
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 140/241 (58%), Gaps = 1/241 (0%)
Query: 31 PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLK 90
PFE++I+ GA +G F++AN + ++K + +L +F + Y D+L LL+ L+ L
Sbjct: 33 PFEMMIIFGAAVGAFLLANSIGIVKATLKALPLVFRGARWKANDYRDLLVLLFELI-RLA 91
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
+ + E HI+ P S+IF P +L ++E + ICD +R + ++E ++++
Sbjct: 92 RANPVALEEHIEQPRASSIFAQYPRILADHEAVSLICDTLRAAGMNYDDPMQVEEVLEKR 151
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTL 210
++ + L+P HA+ M + LPA+GIV A+LG+IK M ++ + P +LG IG +L GT
Sbjct: 152 LEASRHHALQPVHALQTMADGLPALGIVAAVLGVIKTMSSIDEPPAVLGKMIGGALVGTF 211
Query: 211 LGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
LG+ L+Y P+ ++++S + Y ++++ L+A + P + IE GR+ P + R
Sbjct: 212 LGVFLAYGFVGPMAARLQSICDEDAHFYQLIREVLVANLYQHAPPLCIEVGRQSTPENLR 271
Query: 271 P 271
P
Sbjct: 272 P 272
>gi|254521006|ref|ZP_05133061.1| chemotaxis protein [Stenotrophomonas sp. SKA14]
gi|219718597|gb|EED37122.1| chemotaxis protein [Stenotrophomonas sp. SKA14]
Length = 284
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 155/280 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I+ ++GG+ G L QP+E+VI+ GA LG F++ P K +K + +
Sbjct: 1 MLIIVGFLVVIISVLGGYLGAHGRLGALWQPYELVIIGGAALGAFLVGTPAKTVKQTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F Q Y DVL LLY L+ ++ E+H++ P S +F + P V ++
Sbjct: 61 MVGVFKGPRYKQQDYIDVLSLLYELLNKARREGFMALEDHVERPAESALFGNYPKVQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R++I N +E+E L++ E++ E + P ++ + + LP GIV A
Sbjct: 121 HLIDFITDCLRLMIGSNIEPHELEPLLELELEKHHAEAMAPSQVLTKVADGLPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ +G + +L GT LGI+L Y P+ + +++ + R+Y
Sbjct: 181 VLGIVITMGSIGGDIVEVGGHVAGALVGTFLGILLGYGFVGPMAAAMEARAEQDSRIYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
VK AL+A + G P++A+E+ RK LP + RP+ Q +
Sbjct: 241 VKTALLACLRGYNPKIALEFARKTLPSNVRPAFSDFEQHL 280
>gi|157959886|ref|YP_001499920.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157844886|gb|ABV85385.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 285
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 147/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS +IGL I +L + GG+ GG L QP EI+I+ GAGLG V+A P V+
Sbjct: 1 MSKLIGLVIILLSVFGGYMWAGGVLLALWQPAEILIIFGAGLGALVIATPKPVLIVMVEQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L EI + + Y + L+ +LM ++ ++H++ P S++F P +LE+
Sbjct: 61 LKEILKVEKEDPELYPQLFGLMSMLMTQIQMQGLKVIDDHVEKPRESSLFLMYPAILEHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G +++E++++EEI I + ++P HAI+ + E++P GI+ A
Sbjct: 121 NVLNFLIDNLRLQSMGKISPHDLEHILEEEIHRIEEDSMRPSHAIAKIAEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M ++ ++G + +L GT +GI Y L +P+ ++ ++
Sbjct: 181 VMGIIITMSSIDGPITMIGVKVSAALVGTFIGIFACYCLFDPIAKALEHLVERKSAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V L A+ G P +AI+ GRK + + RPS
Sbjct: 241 VAAMLAAFAKGKPPMIAIDAGRKQIQIENRPS 272
>gi|170737029|ref|YP_001778289.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169819217|gb|ACA93799.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 290
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 152/276 (55%), Gaps = 6/276 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I G+ I + C+ GGF MGG+ L QP E++IV G+ +G V+ N V+ D G
Sbjct: 1 MQQIFGILIVLGCVFGGFTFMGGDFRKLWQPVELLIVVGSAVGALVLGNSRHVLVDMGKQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN--ETENHIDDPYNSTIFTSIPTVLE 118
L ++ G + + +LL +MY L R+ +NH+++P+ S +F P VL+
Sbjct: 61 LRKVMGRRKRTANKELQRQQLL--VMYELLNIGRDLKALDNHVENPHESRLFQRYPLVLQ 118
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
EL TFI D +R++ +G S+E+E+++++E+ I P ++ + E++P GIV
Sbjct: 119 GPELLTFIVDNLRLMAMGKISSHELESVLEQELVAIQENIELPSRSLKKISEAMPGFGIV 178
Query: 179 GAILGIIKAMGNLSQ--SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
A+LG++ AMG L S L + ++ GTL+GI Y + +P+++ IK +
Sbjct: 179 AAVLGVVIAMGGLGDGASAAELAENVAAAMIGTLIGIFFCYGVLDPVSNLIKQAMKAEMS 238
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K L+A+ G P +AI+ GR+++ + +PS
Sbjct: 239 EMECMKVILVAFAGGKPPLLAIDAGRRMMQPACKPS 274
>gi|146305233|ref|YP_001185698.1| flagellar motor protein MotA [Pseudomonas mendocina ymp]
gi|145573434|gb|ABP82966.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
Length = 290
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 163/291 (56%), Gaps = 2/291 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G I + C++GG+ G +L QP E+VI+ GAGLG V+ NP +V+ +
Sbjct: 1 MQKLLGALIIVGCVLGGYVMAHGELAMLWQPAEVVIIVGAGLGALVVGNPKEVLVEMCQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F YK G++ +L LLY L+ ++ G + HI++P S +F P + +
Sbjct: 61 IKGVFVYKRRGEEFQRQLLMLLYELLEMVEVGGLKVLDAHIEEPEQSELFAKYPLIRQEK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G ++E+E +++E++ + + L+P ++ +GE++P GI+ A
Sbjct: 121 NLMAFIADNFRLMAMGKISAHELEGFLEQELEAMEHILLQPSRSLHKIGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI- 239
I+GII MGN+ S +G + +L GT LGI + Y + PL++ + S R+K +
Sbjct: 181 IMGIIITMGNIGGSVAEIGAHVAAALVGTFLGIFMCYCVMEPLSNAM-SQRIKTELSALE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V+ L+A++ G +A++ GRK++ +P+ + + V +Y + A+
Sbjct: 240 CVRTTLVAHVAGKPTLLAVDAGRKLIEQDVKPAFKQLETWVNRYEDERDAA 290
>gi|262273511|ref|ZP_06051325.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
gi|262222489|gb|EEY73800.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
Length = 282
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 156/282 (55%), Gaps = 1/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + ++GG+ G L QP E VI+ GA LG V+ANP V+K+
Sbjct: 1 MQVILGFVVVFATVMGGYVMATGKIAALWQPPEFVIILGAALGAMVIANPPYVLKNILTR 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G K G D Y VL+L+Y L+ ++K + ++HI++P +S IF+ P V+++
Sbjct: 61 LKMLMG-KPYGDDFYKSVLQLMYELLEVVRKDGMKKLDDHIENPESSDIFSRYPNVVKSP 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R + +G +++E ++ E++ + + ++P A++ GE++P GIV A
Sbjct: 120 ILLPFITDNLRTLAMGKMTHHDLEAALELEMEALEADLMRPSKALTKTGEAMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M N+ ++G + +L GT G++++Y + +PL+S I K+ +
Sbjct: 180 VLGIVVTMQNIGGPLTLIGVKVAAALVGTFFGVLMAYGVFDPLSSSITGLVKKEMLALRM 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V L+A G +A++ GR++L +PS + Q +++
Sbjct: 240 VATILVAQAQGKPTILALDSGRRLLYSEYKPSFSEMEQWMVR 281
>gi|332187926|ref|ZP_08389659.1| hypothetical protein SUS17_3016 [Sphingomonas sp. S17]
gi|332012087|gb|EGI54159.1| hypothetical protein SUS17_3016 [Sphingomonas sp. S17]
Length = 287
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 148/276 (53%), Gaps = 4/276 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IGL I + + GGF GG P P E++I+ GA +G V+ N K +K G
Sbjct: 1 MFPAIGLVILLGMVFGGFAITGGQLGPVFHAIPHEMLIIGGAAVGALVIGNSGKELKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ +IF + Y DV+ L+ LM L+ E H++DP +S++F P ++
Sbjct: 61 GAMGKIFKGPKYKKQDYLDVIFLVSKLMKMLRTEGPIALEPHVEDPKSSSVFAEYPRLVA 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
++ L I D +R+++V G + +E +MD I +E P + + +SLPA+G
Sbjct: 121 DHTLVNLIADTLRLVVVSSGTLDVHAVEEVMDNAIKTHHHEVEGPQGTLQSLADSLPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LGI+K MG++ + P +LG IG +L GT +G++L+Y + NP ++K
Sbjct: 181 IVAAVLGIVKTMGSIDKPPSVLGGMIGSALVGTFMGVLLAYGIVNPFAGRLKQVIDADAA 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+Y +VK+ +IA ++G + IE R + ++P
Sbjct: 241 IYHVVKQIIIASLHGHPQPLVIEAARSGIAHKDQPG 276
>gi|238753169|ref|ZP_04614612.1| Lateral flagellar motor protein A (MotA-like) [Yersinia rohdei ATCC
43380]
gi|238708608|gb|EEQ00883.1| Lateral flagellar motor protein A (MotA-like) [Yersinia rohdei ATCC
43380]
Length = 525
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 150/272 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + ++C+IGG+ GG QP EI+I+ G+G+G ++ANP V+K+
Sbjct: 238 MQKLFGLVVIMVCVIGGYLMSGGIMSSFWQPGEIIIILGSGVGAMILANPSYVLKEMWHQ 297
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ I + +L LLY L+ + +G + HI+ P NS +F P VL+++
Sbjct: 298 IIAITRKSEYTSEFQQQLLMLLYELLEMVDEGGLKRLDQHIEIPANSPLFQRYPLVLQDH 357
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E ++++E+ + E L P + E++P GI A
Sbjct: 358 HLVTFISDNFRLMAMGKINQHELEGILEQELSAVEEELLVPSRSFHRTAEAMPGFGICAA 417
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ K+ +
Sbjct: 418 VLGIIITMQSIDGSIALIGVKVAAALIGTFLGVFICYCLMDPLANAMEQAMKKKLAFFEC 477
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+ ++ G +A++ GRK+LPL +P+
Sbjct: 478 VRMVLVNHVAGKPSLLAVDAGRKMLPLDSKPT 509
>gi|212637802|ref|YP_002314327.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212559286|gb|ACJ31740.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 285
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 149/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS ++GL I I + GG+ GG L QP EI+I+ GAG+G ++ANP V+ +
Sbjct: 1 MSKLLGLVIIIFSVFGGYVWAGGTLASLWQPAEILIIFGAGVGALIIANPKPVLVEMYDQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E+ + + Y + L+ +LM ++ ++H++ P S++F PTVLE+
Sbjct: 61 LRELVTIEKEDPELYPQLFGLMGMLMTQIQSQGLKVLDDHVEKPRESSLFLMYPTVLEHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G ++++E+++DEEI + + ++P A++ + E++P GI+ A
Sbjct: 121 TVLQFLIDNLRLQSIGKLSAHDLEHILDEEIHRMEEDWMRPSLALNKVAEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M N+ ++G + +L GT +GI Y L +PL+ ++ ++
Sbjct: 181 VMGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCLFDPLSKALEHLVERKAAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V L ++ G P +AI+ GRK + RP+
Sbjct: 241 VAAMLTSFAKGKPPMLAIDAGRKQIQSENRPT 272
>gi|157373191|ref|YP_001471791.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
gi|157315565|gb|ABV34663.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 285
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 139/259 (53%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+ GG+ GGN L QP EI+I+ GAG+G ++ANP V+ D L E+ + +
Sbjct: 14 VFGGYVWAGGNLSSLWQPAEILIIFGAGVGSLIIANPKAVLADMYAQLRELLSVEKEDPE 73
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
Y + L+ +LM ++ + H++ P S++F PTVLE+ + F+ D +R+
Sbjct: 74 LYPQLFGLMGMLMSQIQSQGLRVLDEHVEKPRESSLFLMYPTVLEHPNVLQFLIDNLRLQ 133
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+G +++E++++EEI I ++L+P HA+ + E++P GI+ A++GII M N+
Sbjct: 134 SIGKISPHDLEHILEEEIYRIEEDRLRPAHALGRIAEAMPGFGILAAVMGIIITMSNIDG 193
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
++G + +L GT +GI Y L P + ++ ++ V L A+ G
Sbjct: 194 PITMIGVKVAAALVGTFIGIFACYCLFEPTSKALEHLVERKSAQLRCVAAMLTAFAKGKP 253
Query: 254 PQVAIEYGRKVLPLSERPS 272
P +AI+ GRK + RP+
Sbjct: 254 PMIAIDAGRKQIQSENRPT 272
>gi|213584596|ref|ZP_03366422.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 247
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 129/222 (58%)
Query: 52 KVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFT 111
K IK + ++ +F + Y D+L LLY LM ++ E I++P S IF
Sbjct: 4 KAIKGTMKAIPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFA 63
Query: 112 SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES 171
S P +L + + FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+S
Sbjct: 64 SYPRILADAVMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDS 123
Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
LPA GIV A++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++
Sbjct: 124 LPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKS 183
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ ++ VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 184 AETTKMMQCVKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 225
>gi|330501120|ref|YP_004377989.1| flagellar motor protein MotA [Pseudomonas mendocina NK-01]
gi|328915406|gb|AEB56237.1| flagellar motor protein MotA [Pseudomonas mendocina NK-01]
Length = 290
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 157/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G I + C++GG+ G +L QP E++I+ GAG G V+ANP V+ +
Sbjct: 1 MQKLLGALIIVACVLGGYVMAHGELAMLWQPAEVIIIVGAGFGALVVANPKDVLLEMLHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F YK G++ +L +LY L+ + G + HI++P S +F P + +
Sbjct: 61 IKGVFVYKKRGEEFQRQLLMMLYELLEMVDVGGLKVLDAHIEEPEQSDLFAKYPLIRQEK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G ++E+E +++E++ + + ++P ++ +GE++P GI+ A
Sbjct: 121 NLMAFIADNFRLMAMGKISAHELEGFLEQELEAMEHVLMQPSRSLHKIGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
ILGI+ MGN+ S +G + +L GT LGI + Y + PL+S + +
Sbjct: 181 ILGIVITMGNIGGSVAEIGAHVAAALVGTFLGIFMCYCVMEPLSSAMGQRIKTEMSALEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V+ L+A++ G +A++ GRK++ +P+ + + V +Y + A+
Sbjct: 241 VRTTLVAHVAGKPTLLAVDAGRKLIEQDVKPAFKQLEIWVNRYEDERDAA 290
>gi|120597322|ref|YP_961896.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|146294533|ref|YP_001184957.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|120557415|gb|ABM23342.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|145566223|gb|ABP77158.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
Length = 285
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 146/272 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS ++GL I + + GG+ GG L QP EI+I+ GAG+G ++ANP V+K+
Sbjct: 1 MSKLVGLLIILASVFGGYAWAGGALAALWQPAEILIIMGAGVGALIIANPQSVLKEMLEQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E+F + Y + L+ LM ++ + H+++P S+IF P VL++
Sbjct: 61 LKELFNKGKEDPELYPQLFPLMGTLMAQIQSQGLKVLDEHLENPQQSSIFLMYPAVLKHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G +++E++++EEI I ++L+P A S +GE++P GI+ A
Sbjct: 121 NVLQFLIDNLRVQSIGKISPHDLEHILEEEIHRIEEDRLRPSEAFSKVGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M N+ ++G + +L GT +GI Y +P+ ++ ++
Sbjct: 181 VLGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPMAKALEHLVDRKSAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ L+ + G P +AI+ GRK + RPS
Sbjct: 241 IAAILVTFSKGKPPMMAIDAGRKQIQSENRPS 272
>gi|126734116|ref|ZP_01749863.1| chemotaxis MotA protein [Roseobacter sp. CCS2]
gi|126716982|gb|EBA13846.1| chemotaxis MotA protein [Roseobacter sp. CCS2]
Length = 289
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 143/254 (56%), Gaps = 3/254 (1%)
Query: 22 GGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
GG I+++ PFE++++ GA +G F ++N IK + L +I + Y D+L
Sbjct: 22 GGKMGIILKALPFEMLMICGAAIGAFAISNDGSAIKHTVKDLGKIVKGPKWKAEDYRDLL 81
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
+L+ L+ + K + E+HI+ P STIF P +L++ E ICD +R +
Sbjct: 82 CMLFELL-RVAKTNPVALESHIEAPDTSTIFGKYPKILDDAEAIALICDTLRSASMNYDD 140
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
+++E ++++ I+ L+ K+ HA+ + + LPA+GIV A+LG+IK M ++ Q P++LG
Sbjct: 141 PHQVEEILEKRIEATLHHKMHSTHALQVVADGLPALGIVAAVLGVIKTMASIDQPPEVLG 200
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
IG +L GT LG+ L+Y P ++K+ + + ++++ L+A + P + +E
Sbjct: 201 KLIGGALVGTFLGVFLAYGFVGPFAVKVKAVVEEDAHFHQLIREVLVANLYAHAPNICVE 260
Query: 260 YGRKVLPLSERPSI 273
GR+ +P RPS
Sbjct: 261 VGRQNMPGRYRPSF 274
>gi|159045800|ref|YP_001534594.1| flagellar motor protein MotA [Dinoroseobacter shibae DFL 12]
gi|157913560|gb|ABV94993.1| chemotaxis protein MotA [Dinoroseobacter shibae DFL 12]
Length = 289
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 151/268 (56%), Gaps = 5/268 (1%)
Query: 18 FYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF-GYKALGQDT 74
+ A GG I+++ PFE+ ++ GA +G FV+ N + IK + + ++F G L QD
Sbjct: 18 YLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTLKDVKKVFKGPTWLAQD- 76
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D+L LL+ L+ L + + E HI+DP S IF+ P ++ + E I D MR
Sbjct: 77 YKDLLCLLFELI-RLARQNPVGLEEHIEDPAASNIFSKYPKIMADREAIDLIADTMRSAA 135
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+ +++E ++++ I+ + HA+ + + LPA+GIV A+LG+IK MG++ Q
Sbjct: 136 MNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIVAAVLGVIKTMGSIDQP 195
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
P+ILG IG +L GT LG+ L+Y L P ++++KS + Y+++++ L+A ++
Sbjct: 196 PEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHFYLLIREVLVANLHKHTV 255
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
IE GR+ P RP+ + + + Q
Sbjct: 256 NNCIEVGRQNTPSHIRPTFSDLEEALKQ 283
>gi|126442576|ref|YP_001061207.1| flagellar motor protein MotA [Burkholderia pseudomallei 668]
gi|134280848|ref|ZP_01767558.1| chemotaxis protein MotA [Burkholderia pseudomallei 305]
gi|254182926|ref|ZP_04889519.1| chemotaxis LafT protein [Burkholderia pseudomallei 1655]
gi|254299721|ref|ZP_04967170.1| chemotaxis LafT protein [Burkholderia pseudomallei 406e]
gi|125657183|gb|ABN48671.1| chemotaxis MotA protein [Burkholderia pseudomallei]
gi|126222067|gb|ABN85572.1| chemotaxis protein MotA [Burkholderia pseudomallei 668]
gi|134247870|gb|EBA47954.1| chemotaxis protein MotA [Burkholderia pseudomallei 305]
gi|157809337|gb|EDO86507.1| chemotaxis LafT protein [Burkholderia pseudomallei 406e]
gi|184213460|gb|EDU10503.1| chemotaxis LafT protein [Burkholderia pseudomallei 1655]
Length = 283
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 144/272 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG+ + C+ GGF GG + QP EI+I++GA G VM NP V+ + G
Sbjct: 1 MQLAIGILLVFGCVFGGFVLHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K+ G + ++L +LY L+ ++ G + H+++P S +F P +L
Sbjct: 61 IKHVIARKSNGVEFQRELLLMLYELLETVRDGGLKALDQHVEEPRESDLFRKYPMILAQP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A
Sbjct: 121 RLIAFIVDNFRLMAMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M N+ S +G + ++ GT +GI+L Y + PL S +
Sbjct: 181 VLGIVTTMANIGGSVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
VK L A + G +A++ GRK++ L +PS
Sbjct: 241 VKVVLCAQVAGKPTLLAVDAGRKLIQLDVKPS 272
>gi|258622498|ref|ZP_05717520.1| chemotaxis LafT protein [Vibrio mimicus VM573]
gi|258624679|ref|ZP_05719614.1| chemotaxis LafT protein [Vibrio mimicus VM603]
gi|262173364|ref|ZP_06041041.1| Flagellar motor rotation protein MotA [Vibrio mimicus MB-451]
gi|258583071|gb|EEW07885.1| chemotaxis LafT protein [Vibrio mimicus VM603]
gi|258585198|gb|EEW09925.1| chemotaxis LafT protein [Vibrio mimicus VM573]
gi|261890722|gb|EEY36709.1| Flagellar motor rotation protein MotA [Vibrio mimicus MB-451]
Length = 285
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 147/272 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G I +L + GG+ GG+ + QP EI+I+ GA LG ++ NP +V+K++
Sbjct: 1 MQKFLGAIIILLGVFGGYVWAGGSLSAIWQPAEILIIVGAALGSMIIGNPPQVLKETRRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L I +++Y +++ L+ +L+ ++ G + HI++P S IFT P V N
Sbjct: 61 LTMIMSSTKDERESYMELMALMQVLLDTIRNGGFKALDKHIENPEESQIFTRYPLVTRNY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLVSFITDNLRLMAIGQMSPHELEGLLEQEIEAIQTELLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M ++ S ++G + +L GT +GI Y +P ++ + + +
Sbjct: 181 VGGIIITMQSIDGSIVMVGYHVAAALVGTFIGIFGCYCCLDPASNAMAQRIRRDMSAFEF 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+A++ +AI+ GRK + L +P+
Sbjct: 241 VRATLVAHVAKKPALLAIDSGRKHIQLDIKPT 272
>gi|83717992|ref|YP_438355.1| flagellar motor protein MotA [Burkholderia thailandensis E264]
gi|167614801|ref|ZP_02383436.1| flagellar motor protein MotA [Burkholderia thailandensis Bt4]
gi|83651817|gb|ABC35881.1| chemotaxis MotA protein [Burkholderia thailandensis E264]
Length = 283
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 144/272 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG+ + C+ GGF GG + QP EI+I++GA G VM NP V+ + G
Sbjct: 1 MQLAIGILLVFGCVFGGFVLHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K+ G + ++L +LY L+ ++ G + H+++P S +F P +L
Sbjct: 61 IKHVIARKSNGVEFQRELLLMLYELLETVRDGGLKALDQHVEEPKESDLFRKYPMILAQP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A
Sbjct: 121 RLIAFIVDNFRLMAMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M N+ S +G + ++ GT +GI+L Y + PL S +
Sbjct: 181 VLGIVTTMANIGGSVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
VK L A + G +A++ GRK++ L +PS
Sbjct: 241 VKVVLCAQVAGKPTLLAVDAGRKLIQLDVKPS 272
>gi|261341476|ref|ZP_05969334.1| chemotaxis MotA protein [Enterobacter cancerogenus ATCC 35316]
gi|288316272|gb|EFC55210.1| chemotaxis MotA protein [Enterobacter cancerogenus ATCC 35316]
Length = 287
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 148/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G+FI C++GGF GG QP EI+I+ GAGLG V+ANP V+ +
Sbjct: 1 MQKFLGIFIIFACVVGGFLMSGGRLASFWQPGEIIIILGAGLGAMVLANPKPVLAEMYRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
I + +L LL+ L+ ++ G + HI+ P +S +F P +L+N
Sbjct: 61 FRGIMRKNEYTDEYQRQLLMLLFELLELVQDGGLKVLDEHIEVPESSPLFQKYPLILQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ TFI D R++ +G +E+E ++++E+ + L+P ++ E++P GI A
Sbjct: 121 AIITFIADNFRLMAMGKINEHELEGILEQELVAMEENLLQPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ Y L +P+ + ++ KQ +
Sbjct: 181 VLGIIITMQSIDGSIAVIGVKVAAALVGTFLGVFFCYCLMDPVANAMEQRTKKQMAVIEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+ ++ G +A++ GRK+LPL +P+ + V Q
Sbjct: 241 VRTVLVNHVAGKPTLLAVDAGRKMLPLDSKPTFATLDSWVNQ 282
>gi|182412225|ref|YP_001817291.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177839439|gb|ACB73691.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 287
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 140/271 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG I IGGF GG+P +L+ E V++ G G V+A+P V+K
Sbjct: 1 MLILIGGLIVFASAIGGFMLAGGSPVLLLHASEFVVILGIAAGVLVIASPGHVLKHIVHK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + G+ + D+LKLLY + ++ E H+ +P S IF P+VL +
Sbjct: 61 VKGCIVSQNAGRQEFFDLLKLLYEIFMVGRRNGLIALEEHVMEPEKSVIFKRYPSVLNHA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ + ++ +I G + ++E LM+ EID E P H + +G+SLP IGIV A
Sbjct: 121 DRLEFLVNGLKPVIDGKIKPDQLEELMEAEIDAKSEEWDHPVHVLQLVGDSLPGIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ P+++G + +LTGTLLGI +Y NPL ++IK
Sbjct: 181 VLGIINTMAAIADGPEMVGKKVAAALTGTLLGIFFAYGFVNPLANRIKFNNAADLLCLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ +A+ + G P A+E R+ L S +P
Sbjct: 241 IMQAVAGFAKGLAPLTAVEIARRSLDSSVQP 271
>gi|167574626|ref|ZP_02367500.1| flagellar motor protein MotA [Burkholderia oklahomensis C6786]
Length = 283
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 150/272 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG+F+ + + GGF GG + QP EI+I+ GA G VM NP V+ + GV
Sbjct: 1 MQLVIGIFLVLGGVFGGFILHGGALSSIWQPTEILIILGAASGALVMGNPRSVLIEMGVQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ K G + ++L +LY L+ ++ G + H+++P S +F P +L
Sbjct: 61 IKKVIARKGNGTEFQRELLLMLYELLEMVRDGGLKALDQHVEEPRESELFQKYPMILAQP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D R++ +G +E+E+++D+E++ I E ++P ++S + E++P GI+ A
Sbjct: 121 QLIAFIVDNFRLMAMGRITQHELESMLDQELEAIESELMRPSRSLSKVAEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M N+ + +G + ++ GT +GI+L Y + PL S + + +
Sbjct: 181 VLGIVTTMANIGGNVSDIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVNSEISAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
VK L A + G +A++ GRK++ L +PS
Sbjct: 241 VKVVLCAQVAGKPTLLAVDAGRKLIQLDVKPS 272
>gi|149908743|ref|ZP_01897404.1| flagellar motor protein [Moritella sp. PE36]
gi|149808285|gb|EDM68224.1| flagellar motor protein [Moritella sp. PE36]
Length = 285
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 155/290 (53%), Gaps = 5/290 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +GL + +LC+ GGF GG ++ QP E++I+ GAG+G ++ANP V+ +
Sbjct: 1 MQKFVGLGVILLCVFGGFILAGGKLAVMWQPAELMIILGAGIGSMLIANPKYVLVELKNQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
F +A + ++L +++ LM ++ + HI++ S++F + +
Sbjct: 61 FFASFKKEADRGEVMKELLLVMHTLMEMVRNKGLKSIDEHIENWETSSLFLQYEHIHSDR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D RM+ +G S+E+E++++ EI+ + + LKP A+ GE++P GI+ A
Sbjct: 121 LLMHFITDNFRMMSMGKMSSHELEHVLESEIEALEDDLLKPSEALHTTGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M +L ++G +G +L GT LGI Y L P+ + + Q L
Sbjct: 181 VMGIIITMSSLDGPLMMIGLHVGAALVGTFLGIFFCYCLFEPIGESLAARVHNQLLLLTC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK ++A+++G P ++++ GRK++ +P+ + Q + N KAS
Sbjct: 241 VKTMMVAHISGKSPVLSVDSGRKLIDREIKPTFVEMEQWL-----NAKAS 285
>gi|260767947|ref|ZP_05876881.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|260615977|gb|EEX41162.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|315179651|gb|ADT86565.1| flagellar motor protein MotA [Vibrio furnissii NCTC 11218]
Length = 285
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 142/273 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G I ++C+ GG+ GG+ + QP E +I+AGA LG ++ NP +V+K+
Sbjct: 1 MQKFLGAIIVLMCVFGGYVWAGGSLTAIWQPAEFLIIAGAALGSLIIGNPPQVLKEMRRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + Q Y +++ +L +L+ ++ G + HI+ P S IF P V +
Sbjct: 61 LRMMLSQPKNEQAYYMELMAVLQVLLETVRSGGFKSLDKHIESPDQSPIFARYPLVARDY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EID I + L P ++ E+LP GI+ A
Sbjct: 121 RLVSFITDNLRLMAMGQMSPHELEGLLEQEIDAIQTDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +P ++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPASNAMAQRVKRDMSAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V+ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|227326902|ref|ZP_03830926.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 217
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 121/195 (62%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ LL+ +M ++ E ID+P S IF+S P +L +N + FI DY+R+++ GN
Sbjct: 1 MALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILADNTVVEFITDYLRLMVSGNM 60
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A++G++ ++ + + L
Sbjct: 61 NAFEIETLMDEEIETIEHESEVPASSLTMMGDGLPAFGIVAAVMGVVHSLAYVDRPAAEL 120
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I ++ GT LGI+L+Y +PL + ++ ++ ++ +K L++ +NG PQ+A+
Sbjct: 121 GMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQCIKVTLLSSLNGYAPQIAV 180
Query: 259 EYGRKVLPLSERPSI 273
E+GRK L +ERPS
Sbjct: 181 EFGRKTLYSTERPSF 195
>gi|167567202|ref|ZP_02360118.1| flagellar motor protein MotA [Burkholderia oklahomensis EO147]
Length = 281
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 149/269 (55%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG+F+ + + GGF GG + QP EI+I+ GA G VM NP V+ + GV + +
Sbjct: 2 VIGIFLVLGGVFGGFILHGGALSSIWQPTEILIILGAASGALVMGNPRSVLIEMGVQIKK 61
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ K G + ++L +LY L+ ++ G + H+++P S +F P +L +L
Sbjct: 62 VIARKGNGTEFQRELLLMLYELLEMVRDGGLKALDQHVEEPRESELFQKYPMILAQPQLI 121
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI D R++ +G +E+E+++D+E++ I E ++P ++S + E++P GI+ A+LG
Sbjct: 122 AFIVDNFRLMAMGRITQHELESMLDQELEAIESELMRPSRSLSKVAEAMPGFGILAAVLG 181
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
I+ M N+ + +G + ++ GT +GI+L Y + PL S + + + VK
Sbjct: 182 IVTTMANIGGNVSDIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVNSEISAFECVKV 241
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
L A + G +A++ GRK++ L +PS
Sbjct: 242 VLCAQVAGKPTLLAVDAGRKLIQLDVKPS 270
>gi|255021444|ref|ZP_05293491.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
gi|254969149|gb|EET26664.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
Length = 192
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%)
Query: 98 ENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE 157
E IDDP S +F P +L ++ + F+ DY+R++I GN +E+ENLMD +ID E
Sbjct: 4 EGDIDDPAASELFKKYPVLLADHSVLEFLTDYLRLMIGGNLGVFEMENLMDLDIDTHHRE 63
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSY 217
P HA++ + +PA GIV A++G++ M ++ + P +LG I +L GT LGI+L Y
Sbjct: 64 LEVPVHALTRAADGMPAFGIVAAVMGVVHVMASVDKPPAVLGELIAAALVGTFLGILLGY 123
Query: 218 SLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ +P+ S+I+ + ++ +K AL+A MN PQVA+E+GRKVL +ERPS +
Sbjct: 124 AVVSPIASRIEDRVAEGTKMLECIKVALLATMNAYPPQVAVEFGRKVLFSTERPSFQ 180
>gi|89072297|ref|ZP_01158876.1| flagellar motor protein [Photobacterium sp. SKA34]
gi|89051829|gb|EAR57281.1| flagellar motor protein [Photobacterium sp. SKA34]
Length = 285
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 144/273 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I+C+ GG+ GGN + QP E++I+AGA LG ++ NP V+K+
Sbjct: 1 MQKFIGAIIIIICVFGGYVWAGGNLRAIWQPAELLIIAGATLGSLIIGNPPHVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+I + Y +++ LL L+ ++ + HI+ P +STIF P + ++
Sbjct: 61 FRQILSPRNNEAQYYMELMALLQTLLDTVRNKGFKALDEHIESPQSSTIFNRYPLIKNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +FI D +R++ +G YE+E L+++EI I + L P ++ E+LP GI+ A
Sbjct: 121 HVISFITDNLRLMAMGQMSPYELEGLLEQEISAIEEDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M + S ++G + +L GT LGI Y + +P ++ + + +
Sbjct: 181 VMGIIITMQAIDGSIAMIGYHVAAALVGTFLGIFGCYCILDPASNAMAQRVKRNMSAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 IRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|157147078|ref|YP_001454397.1| flagellar motor protein MotA [Citrobacter koseri ATCC BAA-895]
gi|157084283|gb|ABV13961.1| hypothetical protein CKO_02855 [Citrobacter koseri ATCC BAA-895]
Length = 287
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 145/272 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G+ I + C++GGF GG+ QP EI+I+ GAGLG V+ANP V+ +
Sbjct: 1 MQKFLGILIIMGCVVGGFILSGGHLASFWQPGEIIIILGAGLGAMVLANPKAVLSEMYRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
I + +L LLY L+ ++ G + HI+ P NS +F P +L +
Sbjct: 61 FRGIMRKNEYTDEYQRQLLMLLYELLELVQDGGLKVLDEHIEAPENSALFQKYPLMLHDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E ++++E+ + L+P ++ E++P GI A
Sbjct: 121 ALVTFISDNFRLMAMGKINEHELEGILEQELVAMEENLLQPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ Y L +P+ + ++ KQ +
Sbjct: 181 VLGIIITMQSIDGSIAVIGVKVAAALVGTFLGVFFCYCLMDPVANAMEQRTKKQISVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+ ++ G +A++ GRK+LP+ +P+
Sbjct: 241 VRTVLVNHVAGKPTLLAVDAGRKMLPMDTKPT 272
>gi|13446370|gb|AAK20926.1| LafT [Aeromonas hydrophila]
Length = 284
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 139/255 (54%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
F GG P L QP E++I+ GA +G + N +V+ + + + F ++ Y +
Sbjct: 17 FMMAGGKPIALWQPAELIIIIGAAVGSMFLGNSKEVMHEMWRQMRQCFKSNKDEKEIYRE 76
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+L L++ L+ + + HI++P S++F P + E+ +L FI D +R++ +G
Sbjct: 77 LLTLMHQLLEETRNKGMKALDEHIENPQQSSVFLMYPQISEDPQLLGFIIDNLRLLGMGK 136
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+E++ ++++EI I + LKP HA+ GE+ P GI+ A++GII M L
Sbjct: 137 ITPHELDTMLEQEIMAIEEDMLKPAHALHKTGEACPGFGILAAVMGIIITMQQLDGPLSN 196
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+G + +L GT +GI L Y L P+++ ++ ++ L + +K LIA + G P ++
Sbjct: 197 IGVHVAAALVGTFIGIFLCYCLLEPISNAMEEMVKRRIGLLMCIKSILIAQLRGKTPLIS 256
Query: 258 IEYGRKVLPLSERPS 272
++ GRK+L ++PS
Sbjct: 257 VDSGRKMLEPDDKPS 271
>gi|330447922|ref|ZP_08311570.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492113|dbj|GAA06067.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 285
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 145/273 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I+C+ GG+ GGN + QP E++I+AGA +G ++ NP V+K+ +
Sbjct: 1 MQKFIGAIIIIICVFGGYIWAGGNLRAIWQPAELLIIAGATIGSLIIGNPPHVLKEMRLQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
EI + Y +++ LL L+ ++ ++HI+ P +S IF P + ++
Sbjct: 61 FREILSPNHHEEQYYMELMALLQALLDTVRNNGFKALDSHIESPQSSAIFNRYPLISNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +FI D +R++ +G YE+E L+++EI I + L P ++ E+LP GI+ A
Sbjct: 121 HVISFITDNLRLMAMGQMSPYELEGLLEQEISAIEEDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M + S ++G + +L GT LGI Y + +P ++ + + +
Sbjct: 181 VMGIIITMQAIDGSIAMIGYHVAAALVGTFLGIFGCYCILDPASNAMAQRVKRNMSAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 IRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|90577361|ref|ZP_01233172.1| flagellar motor protein [Vibrio angustum S14]
gi|90440447|gb|EAS65627.1| flagellar motor protein [Vibrio angustum S14]
Length = 285
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 143/273 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I+C+ GG+ GGN + QP E +I+AGA LG ++ NP V+K+
Sbjct: 1 MQKFIGAIIIIICVFGGYVWAGGNLRAIWQPAEFLIIAGATLGSLIIGNPPHVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ + Y +++ LL L+ ++ + HI+ P +STIF P + ++
Sbjct: 61 FRQVLSPRNNEAQYYMELMALLQTLLDTVRNKGFKALDEHIESPQSSTIFNRYPLIKHDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +FI D +R++ +G YE+E L+++EI I + L P ++ E+LP GI+ A
Sbjct: 121 HVISFITDNLRLMAMGQMSPYELEGLLEQEISAIEEDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M + S ++G + +L GT LGI Y + +P ++ + + +
Sbjct: 181 VMGIIITMQAIDGSIAMIGYHVAAALVGTFLGIFGCYCILDPASNAMAQRVKRNMSAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 IRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|149189847|ref|ZP_01868127.1| flagellar motor protein MotA [Vibrio shilonii AK1]
gi|148836333|gb|EDL53290.1| flagellar motor protein MotA [Vibrio shilonii AK1]
Length = 285
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 142/272 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G I ++C+ GG+ GG+ + QP E +I+ GA +G ++ NP +V+K+
Sbjct: 1 MQKFMGAIIILMCVFGGYVWAGGSMMAIWQPAEFLIIIGATVGSLIIGNPPQVLKEMRSQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L I Q Y +++ LL +L+ ++ G + HI++P S IF P V +
Sbjct: 61 LRSIMSPHKDEQAFYMELMALLQVLLETVRSGGFKALDKHIENPEQSPIFNRYPLVSRDY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I + L P ++ E+LP GI+ A
Sbjct: 121 RLVSFITDNLRLMAMGQMSPHELEGLLEQEIEAIESDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT LGI Y +P ++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFLGIFGCYCCLDPASNAMAQRVKRDMSAFDC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 IRATLVAYVAKKPTLLAIDAGRKHIQLDIKPT 272
>gi|258592513|emb|CBE68822.1| Chemotaxis protein [NC10 bacterium 'Dutch sediment']
Length = 288
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 141/251 (56%), Gaps = 1/251 (0%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG +LIQP E +I+ GA +GG ++A PLKV+K ++ I G L + Y +VL++
Sbjct: 22 GGPIPVLIQPVEFLIIGGASIGGLLIAVPLKVLKILISQVMGILG-SGLDKQAYLEVLQV 80
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
++ L K+ ++ + P S IF+ T + + F+CD +R+++ G
Sbjct: 81 MHDLFTKAKREGFTAIDSDLASPDKSPIFSKYNTFTKQHHAMNFLCDSLRLVVDGAVDPE 140
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E++ +MD E+D E + ++ +G+SLP +GIV A+LGI+ M + P+ +G
Sbjct: 141 ELDAIMDIELDTHHEEGGQVPSILAKVGDSLPGLGIVAAVLGIVITMQAIDGPPEEIGHK 200
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+ V+L GT +GI+ SY + PL+ ++ + + +K L+A+ GA P +A+E+G
Sbjct: 201 VAVALVGTFVGILASYGVVQPLSQSLEHQAQCEGKYLACIKTCLVAFARGAPPIIAVEFG 260
Query: 262 RKVLPLSERPS 272
R+V+ +RPS
Sbjct: 261 RRVIFSYDRPS 271
>gi|312884824|ref|ZP_07744516.1| flagellar motor protein MotA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367476|gb|EFP95036.1| flagellar motor protein MotA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 285
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 146/280 (52%), Gaps = 4/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GGN + QP E +I+ GA +G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLICVFGGYMWAGGNLTAIWQPAEFLIIIGAAIGSLIIGNPPQVLKEMRRQ 60
Query: 61 L-LEIFGYKALGQDTYC-DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ L I G K + YC +++ LL +L+ ++ G + HI+ P S IF+ P + +
Sbjct: 61 ITLTISGAKQ--EKEYCMELMALLQVLLETVRSGGFKSLDKHIEAPDESPIFSRYPLIAK 118
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ L +FI D R++ +G +E+E L+++EID I L P ++ E+LP GI+
Sbjct: 119 DFRLVSFITDNFRLMAMGQMSPHELEGLLEQEIDAIQTNLLLPSKSMQRTAEALPGFGIL 178
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 179 AAVGGIIITMSAIDGSIAMIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVKRDMSAF 238
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
V+ L+AY+ +AI+ GRK + L +P+ + Q
Sbjct: 239 ECVRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMEQ 278
>gi|323492325|ref|ZP_08097478.1| flagellar motor protein MotA [Vibrio brasiliensis LMG 20546]
gi|323313372|gb|EGA66483.1| flagellar motor protein MotA [Vibrio brasiliensis LMG 20546]
Length = 285
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 146/275 (53%), Gaps = 4/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G +LC+ GG+ GGN + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLLCVFGGYVWAGGNLGAIWQPAEYMIIIGAAAGSLIIGNPPQVLKEMRRQ 60
Query: 61 L-LEIFGYKALGQDTYC-DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ L I G K + YC +++ L+ +L+ ++ G + HI++P S IF+ P V +
Sbjct: 61 IGLTISGPKE--EREYCMELMALMQVLLETVRSGGFKSLDKHIENPEQSPIFSRYPLVAK 118
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ L +FI D +R++ +G +E+E L+++EID I + L P ++ E+LP GI+
Sbjct: 119 DYRLVSFITDNLRLMAMGQMSPHELEGLLEQEIDAIQTDLLLPSRSMQRTAEALPGFGIL 178
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 179 AAVGGIIITMQAIDGSIALIGYHVAAALVGTFVGIFGCYCCLDPLSNAMAQRVKRDMTAF 238
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V+ L+AY+ +AI+ GRK + L +P+
Sbjct: 239 ECVRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|254255075|ref|ZP_04948392.1| Flagellar motor component [Burkholderia dolosa AUO158]
gi|124899720|gb|EAY71563.1| Flagellar motor component [Burkholderia dolosa AUO158]
Length = 290
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 142/274 (51%), Gaps = 2/274 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ I + C++GGF MGGN L QP E++I+ GA G V+ NP V+ +
Sbjct: 1 MQQIVGIVIVMACVLGGFIFMGGNVAKLWQPVELLIIVGAAAGALVIGNPRHVLSEMASQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + T LL + + H++ P+ S++FT P VL
Sbjct: 61 VRKVVTGRKRASGTEFQRQLLLLMYELLEVGRDLKALDQHVEAPHESSLFTRYPLVLAEP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D RM+ +G ++E+E ++++E+ I + +P ++ + +++P GIV A
Sbjct: 121 KLLAFIVDNFRMMALGKISAHELEGVLEQELVAIHEDLEQPSRSMKKISDAMPGFGIVAA 180
Query: 181 ILGIIKAMG--NLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LG++ AM N S L +G ++ GT +GI Y + +PL+S I + +
Sbjct: 181 VLGVVMAMNGINAGASAGELAEQVGAAMIGTFIGIFFCYGVLDPLSSVIGQLVRAEMSDF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
K L+AY G P +AI+ GR+++ L +PS
Sbjct: 241 ECAKVVLVAYAAGKPPLLAIDAGRRLVQLINKPS 274
>gi|114799859|ref|YP_762020.1| chemotaxis MotA protein [Hyphomonas neptunium ATCC 15444]
gi|114740033|gb|ABI78158.1| chemotaxis MotA protein [Hyphomonas neptunium ATCC 15444]
Length = 291
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 137/271 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL I ++ + GG GG + PFE+ ++ GA +G ++ N V +++
Sbjct: 1 MLQLAGLVIVLILVGGGLALTGGPAAMHALPFELALIGGAAIGTVMLGNSPAVAREALAG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + Y D+ L LM +K+ E I+ P S +F + P +L +
Sbjct: 61 FVRAFQGSRWKKADYGDLFTLTGGLMRAVKRRGFVAIEADIEVPEESALFQAAPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T ICD R++ + + + M E ID +++K A+ + ++LPA+GIV A
Sbjct: 121 PARTLICDAFRLMALDLSDPQRADQRMMEAIDGHTAQRVKAVGALQTLADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII+ MG + Q P ILG IG +L GT LG+ L+Y L P+ ++ ++
Sbjct: 181 VLGIIRTMGAIDQEPAILGAMIGAALLGTFLGVFLAYGLVGPIAARYGQIVEEEAIFLET 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
++ + ++ GA P +AIE R LPL+ +P
Sbjct: 241 IRSVIRSFGEGAAPSLAIEMARTTLPLTLQP 271
>gi|254444187|ref|ZP_05057663.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198258495|gb|EDY82803.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 286
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 143/274 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I + +G F GG+ +L P EI+ + G LG V+ P V+ + +
Sbjct: 1 MFVIIGSLIVLGATVGAFIWSGGSLILLWHPPEILAIGGISLGVAVICAPKDVLIHTVHA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L +D Y D++K++Y L ++ + H+ P +S+IF + P+ L +
Sbjct: 61 ILGALKGAGPSKDDYLDLMKVMYELFMLGRRNGLLALDEHVSSPESSSIFQNYPSFLADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ TF+C +R II G + ++E L+ EID + P + + +G+SLP IGIV A
Sbjct: 121 DKVTFLCSALRPIIDGKIKPDQLEPLLKAEIDAKKHAAHGPINVLHLLGDSLPGIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L Q ++G I +L+GT LGI ++Y NPL + I+ + YI
Sbjct: 181 VMGIILTMSVLDQGVMVIGGKISAALSGTFLGIFVAYGFINPLCNVIEFGNEAEETYYIC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ +++ A+ G P +A+E R+ L S PS +
Sbjct: 241 MSRSIGAFARGLAPIMAVELARRSLEASMVPSAD 274
>gi|304413522|ref|ZP_07394995.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
gi|304284365|gb|EFL92758.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
Length = 285
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 150/276 (54%), Gaps = 9/276 (3%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL I + C+IGG+ GG QP EI+I+ GAG+G ++ANP V+ +
Sbjct: 1 MQKLLGLIIIMFCVIGGYLMSGGIMSSFWQPGEIIIILGAGMGAMILANPKYVLVEMWQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYN----LKKGSRNETENHIDDPYNSTIFTSIPTV 116
+ + + ++ Y + +L+Y + +G + + HI+ P NST+F P +
Sbjct: 61 IKSV-----VSKNQYTLEFQQQLLLLYELLEMVDEGGLKKLDEHIEIPENSTLFQKYPLI 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ L TFI D R++ +G +E+E ++++E+ + + L P ++ E++P G
Sbjct: 116 LKHKGLVTFISDNFRLMAMGKINEHELEGILEQELGAVEEQLLVPSRSMQRTAEAMPGFG 175
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I A+LGII M ++ S ++G + +L GT LG+ + Y +PL + ++ K+
Sbjct: 176 ICAAVLGIIITMQSIDGSIALIGIKVAAALIGTFLGVFICYCFMDPLANAMEQEMKKRLS 235
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ V+ L+ ++ G +A++ GRK+LPL +P+
Sbjct: 236 FFECVRIVLVNHVAGKPSLLAVDSGRKMLPLDNKPT 271
>gi|296122829|ref|YP_003630607.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296015169|gb|ADG68408.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 287
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 139/271 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + C++GG+ GG+ LI P E++ + GA LG ++ K++KD S
Sbjct: 1 MFVIIGFIVVTGCVLGGYTWAGGHVEALIHPSEVLTIGGASLGAMLVMGSPKILKDLIKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ + Y D+ KL Y L+ +K E H++DP+ S IF+ P + +++
Sbjct: 61 IIGALKGSPFNKKAYGDLFKLSYDLLKTARKDGLLALEPHLNDPHESKIFSKYPRLQKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TTF+CD + ++ + ++ +L+ ++I ++ E + ++ +++P GIV A
Sbjct: 121 HFTTFLCDGLSSVVEASMSQEQLHDLLQKQIAVMEEEHHQAVGILAKSADAMPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG + + +G +G +L GT LGI+ SY PL +++ + Y
Sbjct: 181 VLGIVITMGAIDGPVEEIGHKVGAALVGTFLGILASYGFMAPLAARMDLLGKSEMDFYRT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A + GA P+ IE R+V+ RP
Sbjct: 241 TAAIIEAAIGGAAPKQIIEQARRVVCSEARP 271
>gi|222872324|gb|EEF09455.1| predicted protein [Populus trichocarpa]
Length = 190
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 107/174 (61%)
Query: 98 ENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE 157
E+ ++ P S IFT P +L ++ + F+ DY+RM++ GN S+EIE+LMD EI+ E
Sbjct: 4 ESDVEAPNESPIFTKYPELLADHHVVEFLTDYLRMMVSGNLNSHEIESLMDSEIEAHHAE 63
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSY 217
P +A++ + +LPA GI+ A+LG++ MG++ Q P +LG I +L GT LGI+L+Y
Sbjct: 64 AHAPVNALTRLAGALPAFGIIAAVLGVVNTMGSVGQPPSVLGGMIASALVGTFLGILLAY 123
Query: 218 SLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+L P+ ++ + +K L+A M G P AIE+GRKVL +ERP
Sbjct: 124 ALVEPMAGLVEQRAQDAAKELECIKTTLLASMQGYNPATAIEFGRKVLFSTERP 177
>gi|167576626|ref|ZP_02369500.1| flagellar motor protein MotA [Burkholderia thailandensis TXDOH]
Length = 270
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 138/259 (53%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+ GGF GG + QP EI+I++GA G VM NP V+ + G + + K+ G +
Sbjct: 1 MFGGFVMHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQIKHVIARKSNGVE 60
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
++L +LY L+ ++ G + H+++P S +F P +L L FI D R++
Sbjct: 61 FQRELLLMLYELLETVRDGGLKALDQHVEEPKESDLFRKYPMILAQPRLIAFIVDNFRLM 120
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A+LGI+ M N+
Sbjct: 121 AMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAAVLGIVTTMANIGG 180
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
S +G + ++ GT +GI+L Y + PL S + VK L A + G
Sbjct: 181 SVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALECVKVVLCAQVAGKP 240
Query: 254 PQVAIEYGRKVLPLSERPS 272
+A++ GRK++ L +PS
Sbjct: 241 TLLAVDAGRKLIQLDVKPS 259
>gi|167725892|ref|ZP_02409128.1| flagellar motor protein MotA [Burkholderia pseudomallei DM98]
gi|167905051|ref|ZP_02492256.1| flagellar motor protein MotA [Burkholderia pseudomallei NCTC 13177]
Length = 270
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 138/259 (53%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+ GGF GG + QP EI+I++GA G VM NP V+ + G + + K+ G +
Sbjct: 1 MFGGFVLHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQIKHVIARKSNGVE 60
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
++L +LY L+ ++ G + H+++P S +F P +L L FI D R++
Sbjct: 61 FQRELLLMLYELLETVRDGGLKALDQHVEEPRESDLFRKYPMILAQPRLIAFIVDNFRLM 120
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A+LGI+ M N+
Sbjct: 121 AMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAAVLGIVTTMANIGG 180
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
S +G + ++ GT +GI+L Y + PL S + VK L A + G
Sbjct: 181 SVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALECVKVVLCAQVAGKP 240
Query: 254 PQVAIEYGRKVLPLSERPS 272
+A++ GRK++ L +PS
Sbjct: 241 TLLAVDAGRKLIQLDVKPS 259
>gi|257141386|ref|ZP_05589648.1| flagellar motor protein MotA [Burkholderia thailandensis E264]
Length = 270
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 138/259 (53%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+ GGF GG + QP EI+I++GA G VM NP V+ + G + + K+ G +
Sbjct: 1 MFGGFVLHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQIKHVIARKSNGVE 60
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
++L +LY L+ ++ G + H+++P S +F P +L L FI D R++
Sbjct: 61 FQRELLLMLYELLETVRDGGLKALDQHVEEPKESDLFRKYPMILAQPRLIAFIVDNFRLM 120
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A+LGI+ M N+
Sbjct: 121 AMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAAVLGIVTTMANIGG 180
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
S +G + ++ GT +GI+L Y + PL S + VK L A + G
Sbjct: 181 SVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALECVKVVLCAQVAGKP 240
Query: 254 PQVAIEYGRKVLPLSERPS 272
+A++ GRK++ L +PS
Sbjct: 241 TLLAVDAGRKLIQLDVKPS 259
>gi|73913488|gb|AAZ91671.1| MotA [Wigglesworthia glossinidia endosymbiont of Glossina
morsitans]
Length = 247
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 127/212 (59%)
Query: 71 GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
+D Y DV+ L+Y L+ ++ +E ID+P S IF++ P +L++ + F+ DY+
Sbjct: 19 NKDMYMDVMSLIYRLLSKSRQSGLISSEKDIDNPETSKIFSNYPLMLKDKLIIDFLVDYL 78
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R++I GN +YEIE LM+EEI+ E P ++ +G++LPA GIV A++G++ A+
Sbjct: 79 RLMISGNLNAYEIEALMNEEIETCEQEHEVPITSLLQVGDALPAFGIVAAVMGVVNALAA 138
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ LG I ++ GT LGI+L+Y PL + +K + ++ +K L++ +N
Sbjct: 139 ADRPAAELGELIAHAMVGTFLGILLAYGCVMPLGALLKQKSDEHIKMLQCIKITLLSSIN 198
Query: 251 GAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
G PQ+AIE+GRK+L SERPS + + + Q
Sbjct: 199 GYAPQIAIEFGRKILYSSERPSFTELEEHLRQ 230
>gi|163800114|ref|ZP_02194015.1| flagellar motor protein [Vibrio sp. AND4]
gi|159175557|gb|EDP60351.1| flagellar motor protein [Vibrio sp. AND4]
Length = 285
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 140/273 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GG + QP E +I+ GA +G ++ NP V+K+
Sbjct: 1 MQKFFGAITILVCVFGGYMWAGGKLGAIWQPAEFLIIIGAAVGSLIIGNPPHVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + Y +++ LL L+ + ++HI+ P S+IFT+ P V ++
Sbjct: 61 LRATISSPREEYEYYMELMALLNNLLETARSRGFKHLDSHIESPEQSSIFTAHPKVSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ GE+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIESIQTEMLLPSRSMQRTGEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V+ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|307824076|ref|ZP_07654303.1| flagellar motor protein MotA [Methylobacter tundripaludum SV96]
gi|307734860|gb|EFO05710.1| flagellar motor protein MotA [Methylobacter tundripaludum SV96]
Length = 282
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 126/245 (51%), Gaps = 3/245 (1%)
Query: 27 ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILM 86
+L QPFE VI+ GA +G FV N + VIK + ++ Y ++L Y +
Sbjct: 27 VLFQPFEFVIIIGAAVGAFVCGNSMSVIKAAISQATATLKGTKYNKEYYLELLLCFYAIT 86
Query: 87 YNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENL 146
+K E+ IDDP +S +FT P +L ++ L FICD +R+I+ G Y +E L
Sbjct: 87 TKTRKEGLLSLESIIDDPKSSPVFT--PRILGDHHLLEFICDNLRLIVTG-VEVYALEEL 143
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
MD+E++ E P AI ++ + LPA GIV A++G++ M ++ P LG I +L
Sbjct: 144 MDQELETHHEEAHAPVKAIQNLADGLPAFGIVAAVMGVVHTMESVGIPPSELGKLIAAAL 203
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLP 266
GT LGI+L+Y P+ + + +Y +K L+ G P + EY R ++
Sbjct: 204 VGTFLGILLAYGFIGPVGAVMSERFEASGNVYKCAQKGLLCCAKGVSPAMTAEYMRTMIA 263
Query: 267 LSERP 271
S RP
Sbjct: 264 SSMRP 268
>gi|224825767|ref|ZP_03698871.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224601991|gb|EEG08170.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 287
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 155/275 (56%), Gaps = 5/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G+ I + C+ GGF GG+ +++ QP E++I+ GA +G V+ NP V+ + G
Sbjct: 1 MQQLLGIGIVLGCVFGGFMLGGGSFHVIWQPVELLIICGAAIGAIVLGNPKHVLLEMGGQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K G + +L L+Y L+ +G + E H++ P S +F P VL+
Sbjct: 61 IKRVVLRKKHGAEFQRQLLLLMYELLITASQGLKALDE-HVEAPRQSPLFNRYPLVLQQP 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D R++ +G ++E+E ++D+EID I E +P ++ +GE++P GI+ A
Sbjct: 120 KLLAFIVDNFRLMAMGKISAHELEGVLDQEIDAIHEELNQPSKSLHKIGEAMPGFGILAA 179
Query: 181 ILGIIKAM---GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+LGI+ M GN + + +I +G ++ GT +GI Y + +PL++ + ++
Sbjct: 180 VLGIVMTMNSVGNGATTGEI-AEKVGAAMVGTFIGIFFCYGVLDPLSNVMHQQVKEELSN 238
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ VK + + +G P +AI+ GR+++ L+ +PS
Sbjct: 239 FESVKVVITTHASGKPPLLAIDAGRRLVQLNTKPS 273
>gi|56551499|ref|YP_162338.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761143|ref|ZP_04759232.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260752894|ref|YP_003225787.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543073|gb|AAV89227.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis ZM4]
gi|241374762|gb|EER64223.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552257|gb|ACV75203.1| chemotaxis MotA protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 287
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 143/275 (52%), Gaps = 4/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IG I ++ + GGF GG+ P + P E++++ GA +G V N + +K
Sbjct: 1 MFAAIGFTILLVMVFGGFAITGGHLGPVLEAIPHELIVIGGASVGSVVAGNSMLELKLLL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+F ++ Y + + L+ LM L+ E+H+++P +S F P +L
Sbjct: 61 GGFKSVFKGPKFNKEDYQNTIFLVGKLMRTLRTEGPVALESHVENPESSAFFAEYPKLLT 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ L + I D +R+++V G +E+++D I E P + ++ E+LPA G
Sbjct: 121 DKTLVSLITDTLRLVVVSSGTLDPNAVEDVIDNTIKTHHSETSLPADILQNLSEALPAFG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P ILG IG +L GT LG++L+Y + P+ ++ ++
Sbjct: 181 IVAAVLGVVKTMGSIDQPPPILGAMIGSALVGTFLGVLLAYGIVAPMANRCRAVIDSDAH 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+Y ++K+ +I+ M G + IE R +P +P
Sbjct: 241 IYQVIKQMIISSMQGHPLPLVIEAARSDIPEENKP 275
>gi|54307285|ref|YP_128305.1| flagellar motor protein MotA [Photobacterium profundum SS9]
gi|46911705|emb|CAG18503.1| Hypothetical MotA flagellar motor transmembrane protein
[Photobacterium profundum SS9]
Length = 282
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 143/261 (54%), Gaps = 1/261 (0%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
I+ G+ G L QP E +I+ GAG G V++NP V+K+ L +FG K +
Sbjct: 13 SIVYGYTHASGRLLALWQPAEYIIILGAGFGAMVISNPTYVLKNILTRLKMMFG-KGYTE 71
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ VL+L++ L+ ++K + ++HI++P NS+IF P +N L +FI D +RM
Sbjct: 72 AYFKSVLELMFELLEIIRKDGIKKLDDHIENPQNSSIFNKYPEATRSNVLVSFITDNLRM 131
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ + +++E +++ E+ + + ++P A+ +GE++P GIV A+LGI+ M ++
Sbjct: 132 MAMSKMNHHDLEAVLELELHALEDDLMRPSKALGKVGEAMPGFGIVAAVLGIVVTMQSIG 191
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
++G + +L GT GI++ Y++ P+ + I + K+ +V L++ G
Sbjct: 192 GDLALIGVKVAAALVGTFFGILMCYAVFEPIAASIANQVKKEMMAMHMVSAILVSQAQGK 251
Query: 253 IPQVAIEYGRKVLPLSERPSI 273
+A++ GRKVL +PS
Sbjct: 252 PTLLALDAGRKVLHSEFKPSF 272
>gi|213417972|ref|ZP_03351052.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 209
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 120/209 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGMGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
++G++ A+ + + LG I ++ GT
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGT 209
>gi|153947051|ref|YP_001399653.1| flagellar motor protein MotA [Yersinia pseudotuberculosis IP 31758]
gi|152958546|gb|ABS46007.1| chemotaxis protein MotA [Yersinia pseudotuberculosis IP 31758]
Length = 288
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 153/272 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I GL + ++C+IGG+ GG QP EI+I+ G+G+G ++ NP V+KD
Sbjct: 1 MQKIFGLLVIMVCVIGGYLMSGGVLSSFWQPGEIIIIFGSGIGAMILGNPRSVLKDMWHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + + +L LLY L+ + +G + HI+ P NS++F P +L++
Sbjct: 61 ILAVTRRSEYTGEFQQQLLLLLYELLEMVDEGGLKRLDEHIEIPANSSVFQRYPLILQDL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI A
Sbjct: 121 HLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ K+ L+
Sbjct: 181 VLGIIITMQSIDGSIAMIGVKVAAALIGTFLGVFICYCLMDPLANAMEQEIKKKLALFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+ ++ G +A++ GRK+LP+ +P+
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPMDNKPT 272
>gi|269960143|ref|ZP_06174519.1| chemotaxis LafT protein [Vibrio harveyi 1DA3]
gi|269835114|gb|EEZ89197.1| chemotaxis LafT protein [Vibrio harveyi 1DA3]
Length = 285
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 139/273 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GGN + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLMCVFGGYMWAGGNLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF + P V ++
Sbjct: 61 VRATISGPREEYEYYMELMALLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPQVSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V+ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|332162881|ref|YP_004299458.1| Lateral flagellar motor protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|158327336|emb|CAM82842.1| flagellar motor protein MotA [Yersinia enterocolitica W22703]
gi|325667111|gb|ADZ43755.1| Lateral flagellar motor protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863329|emb|CBX73452.1| chemotaxis protein lafT [Yersinia enterocolitica W22703]
Length = 288
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 151/272 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL + + C+IGG+ GG QP EI+I+ G+G+G ++ANP V+K+ +
Sbjct: 1 MQKLIGLLVIMACVIGGYIMSGGILSSFWQPGEIIIIFGSGIGAMILANPGYVLKEMWLQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ I + +L LLY L+ + +G + HI+ P NS +F P +L+++
Sbjct: 61 IVAIMRKSEYTAEFQQQLLMLLYELLEMVDEGGLKRLDEHIEVPANSPLFQRYPLILQDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E ++++E+ + E L P + E++P GI A
Sbjct: 121 HLVTFISDNFRLMAMGKINQHELEGILEQELSAVEEELLAPSRSFHRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ K+ +
Sbjct: 181 VLGIIITMQSIDGSIALIGVKVAAALIGTFLGVFICYCLMDPLANAMEQEMKKKLAFFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+ ++ G +A++ GRK+LPL +P+
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPLDSKPT 272
>gi|318604275|emb|CBY25773.1| flagellar motor rotation protein MotA [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 288
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 150/272 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL + + C+IGG+ GG QP EI+I+ G G+G ++ANP V+K+ +
Sbjct: 1 MQKLIGLLVIMACVIGGYIMSGGILSSFWQPGEIIIIFGCGIGAMILANPGYVLKEMWLQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ I + +L LLY L+ + +G + HI+ P NS +F P +L+++
Sbjct: 61 IVAIMRKSEYTAEFQQQLLMLLYELLEMVDEGGLKRLDEHIEVPANSPLFQRYPLILQDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E ++++E+ + E L P + E++P GI A
Sbjct: 121 HLVTFISDNFRLMAMGKINQHELEGILEQELSAVEEELLVPSRSFHRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ K+ +
Sbjct: 181 VLGIIITMQSIDGSIALIGVKVAAALIGTFLGVFICYCLMDPLANAMEQEMKKKLAFFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+ ++ G +A++ GRK+LPL +P+
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPLDSKPT 272
>gi|91223191|ref|ZP_01258457.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|269967119|ref|ZP_06181186.1| chemotaxis LafT protein [Vibrio alginolyticus 40B]
gi|91192004|gb|EAS78267.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|269828256|gb|EEZ82523.1| chemotaxis LafT protein [Vibrio alginolyticus 40B]
Length = 285
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 141/273 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G+ ++C+ GG+ GG+ + QP E +I+ GA G ++ NP V+K+
Sbjct: 1 MQKFFGVLTILVCVFGGYMWAGGSLGAIWQPAEFLIIIGAAAGSLIIGNPPHVLKEMRRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S++F + PT+ E++
Sbjct: 61 VPATIKGPTEEHEYYMELMALLNNLLETARNRGYKFLDSHIEAPEQSSMFLAYPTIAEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQNEMLLPSRSLQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIAMIGYHVAAALVGTFIGIFGCYCGLDPLSNAMAQRVKRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V+ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|156976179|ref|YP_001447085.1| flagellar motor protein MotA [Vibrio harveyi ATCC BAA-1116]
gi|156527773|gb|ABU72858.1| hypothetical protein VIBHAR_04950 [Vibrio harveyi ATCC BAA-1116]
Length = 285
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 138/273 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GG + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLMCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF + P V ++
Sbjct: 61 VRATISGPRQEYEYYMELMALLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPKVSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V+ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 VRATLVAYVTKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|331663389|ref|ZP_08364299.1| chemotaxis protein MotA [Escherichia coli TA143]
gi|331059188|gb|EGI31165.1| chemotaxis protein MotA [Escherichia coli TA143]
Length = 247
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 131/235 (55%), Gaps = 4/235 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAI----GVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
++G++ A+G+ + LG A G +G+ + + + TS+ + +
Sbjct: 181 VMGVVHALGSADRPAAELGAAYRTCDGGDFPRHFIGLRIYFPISECFTSEKRRNQ 235
>gi|153831609|ref|ZP_01984276.1| chemotaxis protein LafT [Vibrio harveyi HY01]
gi|148872119|gb|EDL70936.1| chemotaxis protein LafT [Vibrio harveyi HY01]
Length = 285
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 138/273 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GG + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLMCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF + P V ++
Sbjct: 61 VRATISGPRQEYEYYMELMALLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPQVSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V+ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|260779336|ref|ZP_05888228.1| Flagellar motor rotation protein MotA [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605500|gb|EEX31795.1| Flagellar motor rotation protein MotA [Vibrio coralliilyticus ATCC
BAA-450]
Length = 285
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 137/273 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G +LC+ GG+ GG + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLLCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF + P V +
Sbjct: 61 VRATISAPREEYEYYMELMALLNNLLETARSRGFKFLDSHIEAPDQSSIFLAYPKVGSDY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALVGYHVAAALVGTFVGIFGCYCCLDPLSNAMAQRVKRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V+ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|108809035|ref|YP_652951.1| flagellar motor protein MotA [Yersinia pestis Antiqua]
gi|150260229|ref|ZP_01916957.1| lateral flagellar proton motor protein A [Yersinia pestis
CA88-4125]
gi|162420069|ref|YP_001604824.1| flagellar motor protein MotA [Yersinia pestis Angola]
gi|165925094|ref|ZP_02220926.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166008864|ref|ZP_02229762.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212123|ref|ZP_02238158.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399319|ref|ZP_02304843.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167418793|ref|ZP_02310546.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167466316|ref|ZP_02331020.1| chemotaxis protein MotA [Yersinia pestis FV-1]
gi|218927932|ref|YP_002345807.1| flagellar motor protein MotA [Yersinia pestis CO92]
gi|229840643|ref|ZP_04460802.1| Flagellar motor rotation protein motA [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842805|ref|ZP_04462957.1| Flagellar motor rotation protein motA [Yersinia pestis biovar
Orientalis str. India 195]
gi|294502808|ref|YP_003566870.1| flagellar motor protein [Yersinia pestis Z176003]
gi|108780948|gb|ABG15006.1| putative flagellar motor transmembrane channel protein [Yersinia
pestis Antiqua]
gi|115346543|emb|CAL19420.1| putative flagellar motor transmembrane channel protein [Yersinia
pestis CO92]
gi|149289637|gb|EDM39714.1| lateral flagellar proton motor protein A [Yersinia pestis
CA88-4125]
gi|162352884|gb|ABX86832.1| chemotaxis protein MotA [Yersinia pestis Angola]
gi|165923294|gb|EDR40445.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992203|gb|EDR44504.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206869|gb|EDR51349.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962787|gb|EDR58808.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051823|gb|EDR63231.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|229690072|gb|EEO82129.1| Flagellar motor rotation protein motA [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697009|gb|EEO87056.1| Flagellar motor rotation protein motA [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|262360840|gb|ACY57561.1| flagellar motor protein [Yersinia pestis D106004]
gi|262364785|gb|ACY61342.1| flagellar motor protein [Yersinia pestis D182038]
gi|294353267|gb|ADE63608.1| flagellar motor protein [Yersinia pestis Z176003]
Length = 288
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 154/272 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + + C+IGG+ GG+ QP EI+I+ G+G+G ++ NP V+++
Sbjct: 1 MQKLFGLLVIMGCVIGGYLMSGGSLSSFWQPGEIIIIFGSGIGALILGNPGSVLQEMWHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + + +L LLY L+ + +G + HI+ P NS++F P +L++
Sbjct: 61 ILAVARRSEYTVEFQQQLLLLLYELLEMVDEGGLKRLDEHIEIPANSSVFQRYPLILQDL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI A
Sbjct: 121 HLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL++ ++ K+ L+
Sbjct: 181 VLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+ ++ G +A++ GRK+LP+ +P+
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPMDNKPT 272
>gi|51597619|ref|YP_071810.1| flagellar motor protein MotA [Yersinia pseudotuberculosis IP 32953]
gi|186896752|ref|YP_001873864.1| flagellar motor protein MotA [Yersinia pseudotuberculosis PB1/+]
gi|51590901|emb|CAH22557.1| putative flagellar motor transmembrane channel protein [Yersinia
pseudotuberculosis IP 32953]
gi|186699778|gb|ACC90407.1| MotA/TolQ/ExbB proton channel [Yersinia pseudotuberculosis PB1/+]
Length = 288
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 154/272 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + + C+IGG+ GG+ QP EI+I+ G+G+G ++ NP V+++
Sbjct: 1 MQKLFGLLVIMGCVIGGYLMSGGSLSSFWQPGEIIIIFGSGIGAMILGNPGSVLQEMWHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + + +L LLY L+ + +G + HI+ P NS++F P +L++
Sbjct: 61 ILAVARRSEYTVEFQQQLLLLLYELLEMVDEGGLKRLDEHIEIPANSSVFQRYPLILQDL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI A
Sbjct: 121 HLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL++ ++ K+ L+
Sbjct: 181 VLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+ ++ G +A++ GRK+LP+ +P+
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPMDNKPT 272
>gi|28901411|ref|NP_801066.1| flagellar motor protein MotA [Vibrio parahaemolyticus RIMD 2210633]
gi|153835868|ref|ZP_01988535.1| chemotaxis protein LafT [Vibrio parahaemolyticus AQ3810]
gi|260362965|ref|ZP_05775834.1| chemotaxis protein LafT [Vibrio parahaemolyticus K5030]
gi|260880252|ref|ZP_05892607.1| chemotaxis protein LafT [Vibrio parahaemolyticus AN-5034]
gi|260895369|ref|ZP_05903865.1| chemotaxis protein LafT [Vibrio parahaemolyticus Peru-466]
gi|260901194|ref|ZP_05909589.1| chemotaxis protein LafT [Vibrio parahaemolyticus AQ4037]
gi|417237|sp|Q03477|LAFT_VIBPA RecName: Full=Chemotaxis protein LafT
gi|677909|gb|AAA62354.1| LafT [Vibrio parahaemolyticus]
gi|1518953|gb|AAB07357.1| lateral flagellar MotA [Vibrio parahaemolyticus]
gi|28809958|dbj|BAC62899.1| chemotaxis LafT protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149750622|gb|EDM61367.1| chemotaxis protein LafT [Vibrio parahaemolyticus AQ3810]
gi|308085587|gb|EFO35282.1| chemotaxis protein LafT [Vibrio parahaemolyticus Peru-466]
gi|308092231|gb|EFO41926.1| chemotaxis protein LafT [Vibrio parahaemolyticus AN-5034]
gi|308109320|gb|EFO46860.1| chemotaxis protein LafT [Vibrio parahaemolyticus AQ4037]
gi|308112021|gb|EFO49561.1| chemotaxis protein LafT [Vibrio parahaemolyticus K5030]
gi|328469345|gb|EGF40291.1| flagellar motor protein MotA [Vibrio parahaemolyticus 10329]
Length = 285
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 139/273 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G+ ++C+ GG+ GG + QP E +I+ GA G ++ NP V+K+
Sbjct: 1 MQKFLGVLTILVCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPHVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF P V E++
Sbjct: 61 VPATIKGPTEEYEYYMELMALLNNLLETARSRGFKFLDSHIEAPEQSSIFLMYPLVSEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQNELLLPSRSLQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCGLDPLSNAMAQRVKRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V+ L+AY+ +AI+ GRK + L +P+
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTF 273
>gi|45442812|ref|NP_994351.1| flagellar motor protein MotA [Yersinia pestis biovar Microtus str.
91001]
gi|45437678|gb|AAS63228.1| chemotaxis MotA protein [Yersinia pestis biovar Microtus str.
91001]
Length = 289
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 152/275 (55%), Gaps = 5/275 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + + C+IGG+ GG+ QP EI+I+ G+G+G ++ NP V+++
Sbjct: 1 MQKLFGLLVIMGCVIGGYLMSGGSLSSFWQPGEIIIIFGSGIGALILGNPGSVLQEMWHQ 60
Query: 61 LLEIFG---YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+L + Y Q +L + M + +G + HI+ P NS++F P +L
Sbjct: 61 ILAVARRSEYTVEFQQQLLLLLLYELLEMVD--EGGLKRLDEHIEIPANSSVFQRYPLIL 118
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
++ L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI
Sbjct: 119 QDLHLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGI 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
A+LGII M ++ S ++G + +L GT LG+ + Y L +PL++ ++ K+ L
Sbjct: 179 CAAVLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLAL 238
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ V+ L+ ++ G +A++ GRK+LP+ +P+
Sbjct: 239 FECVRMVLVNHVAGKPSLLAVDAGRKMLPMDNKPT 273
>gi|165939049|ref|ZP_02227601.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
IP275]
gi|165913005|gb|EDR31630.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
IP275]
Length = 288
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 153/272 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + + C+IGG+ GG+ QP EI+I+ G+G+G ++ NP V+++
Sbjct: 1 MQKLFGLLVIMGCVIGGYLMSGGSLSSFWQPGEIIIIFGSGIGALILGNPGSVLQEMWHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + + +L LLY L+ + +G + HI+ P NS++F P +L++
Sbjct: 61 ILAVARRSEYTVEFQQQLLLLLYELLEMVDEGGLKRLDEHIEIPANSSVFQRYPLILQDL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI A
Sbjct: 121 HLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL++ ++ K+ L+
Sbjct: 181 VLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V+ L+ ++ G +A++ G K+LP+ +P+
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGHKMLPMDNKPT 272
>gi|301633049|ref|XP_002945590.1| PREDICTED: chemotaxis protein motA-like [Xenopus (Silurana)
tropicalis]
Length = 189
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 107/176 (60%)
Query: 98 ENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE 157
E+ +++P S +FT P V ++ + FI DY+RM++ GN ++EIE+LMD EI+ E
Sbjct: 4 ESDVENPKESALFTKYPGVGSDHHVVEFITDYLRMMVSGNLNAHEIESLMDSEIETHHQE 63
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSY 217
P A++ + +LPA GIV A+LG++ MG++ Q P +LG I +L GT LGI+L+Y
Sbjct: 64 AHAPVAALARLAGALPAFGIVAAVLGVVNTMGSVGQPPAVLGGMIASALVGTFLGILLAY 123
Query: 218 SLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
L P+ ++ + + +K L+A M G P AIE+GRKVL ++RP+
Sbjct: 124 GLVEPIAGLLEQKAEDAAKEFQCIKSTLLASMQGYNPATAIEFGRKVLFSTDRPTF 179
>gi|254228818|ref|ZP_04922241.1| Flagellar motor component [Vibrio sp. Ex25]
gi|262396463|ref|YP_003288316.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
gi|151938765|gb|EDN57600.1| Flagellar motor component [Vibrio sp. Ex25]
gi|262340057|gb|ACY53851.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
Length = 267
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 131/252 (51%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GGN + QP E +I+ GA G ++ NP V+K+ + + Y +++ L
Sbjct: 4 GGNLGAIWQPAEFLIIIGAAAGSLIIGNPPHVLKEMRRQVPATIKGPTEEHEYYMELMAL 63
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
L L+ + ++HI+ P S++F + PT+ E++ L +FI D +R++ +G +
Sbjct: 64 LNNLLETARNRGYKFLDSHIESPEQSSMFLAYPTIAEDHRLISFITDNLRLMAMGQMSPH 123
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E+E L+++EI+ I E L P ++ E+LP GI+ A+ GII M + S ++G
Sbjct: 124 ELEGLLEQEIEAIQNEMLLPSRSLQRTAEALPGFGILAAVGGIIITMQAIDGSIAMIGYH 183
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+ +L GT +GI Y +PL++ + + + V+ L+AY+ +AI+ G
Sbjct: 184 VAAALVGTFIGIFGCYCGLDPLSNAMAQRVKRNMTAFECVRATLVAYVAKKPTLLAIDAG 243
Query: 262 RKVLPLSERPSI 273
RK + L +P+
Sbjct: 244 RKHIQLDIKPTF 255
>gi|168703395|ref|ZP_02735672.1| chemotaxis protein [Gemmata obscuriglobus UQM 2246]
Length = 281
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 126/256 (49%)
Query: 17 GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC 76
GF GG LI E V + GA LG +M +P+KVIKD L+ G+
Sbjct: 17 GFSMAGGKIGALIHLSEFVTIGGATLGSLIMMSPVKVIKDLIRGALQTVKGSPYGKAACV 76
Query: 77 DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG 136
++LKL Y L +++ ++HI +P S + P + N+ F+CD + +I+ G
Sbjct: 77 ELLKLQYALARLVRQEGLLALDSHITNPDGSALLREYPKLNGNHHAREFLCDSLALILDG 136
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
S ++ ++EEI ++ E +S +SLP GIV A+LGI+ M + +
Sbjct: 137 TVESSQLTEWLEEEIQVVEREHNAAVDTLSKTADSLPGFGIVAAVLGIVVTMQAIGGPVE 196
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+G +G +L GT LGI+ +Y P+ +++ + ++ + ++A +GA P+
Sbjct: 197 EIGYKVGAALVGTFLGILAAYGFVAPMAARMHALGDQEILFLKAMAVGVVAMNDGASPKD 256
Query: 257 AIEYGRKVLPLSERPS 272
+ R+V+ RP+
Sbjct: 257 VVARARRVISTDCRPN 272
>gi|309786019|ref|ZP_07680648.1| motA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
1617]
gi|308926130|gb|EFP71608.1| motA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
1617]
Length = 256
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 102/189 (53%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
I + ++ G + HI+ P STIF P VL L TFI D R++ +G ++E+
Sbjct: 53 ITLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQKRLVTFIADNFRLMAMGKIDAHEL 112
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E ++D+E+D L P ++ E++P GI A+LGII M ++ S ++G +
Sbjct: 113 EGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAAVLGIIITMQSIDGSIALIGLKVA 172
Query: 204 VSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRK 263
+L GT LG+ + Y L +PL + ++ +H L V+ L+A G +A++ GRK
Sbjct: 173 AALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLECVRTVLVAQAGGKPTLLAVDAGRK 232
Query: 264 VLPLSERPS 272
+L L+ +P+
Sbjct: 233 LLHLASKPT 241
>gi|82775834|ref|YP_402181.1| putative flagellar motor transmembrane channel protein [Shigella
dysenteriae Sd197]
gi|81239982|gb|ABB60692.1| putative flagellar motor transmembrane channel protein [Shigella
dysenteriae Sd197]
Length = 247
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 102/189 (53%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
I + ++ G + HI+ P STIF P VL L TFI D R++ +G ++E+
Sbjct: 44 ITLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQKRLVTFIADNFRLMAMGKIDAHEL 103
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E ++D+E+D L P ++ E++P GI A+LGII M ++ S ++G +
Sbjct: 104 EGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAAVLGIIITMQSIDGSIALIGLKVA 163
Query: 204 VSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRK 263
+L GT LG+ + Y L +PL + ++ +H L V+ L+A G +A++ GRK
Sbjct: 164 AALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLECVRTVLVAQAGGKPTLLAVDAGRK 223
Query: 264 VLPLSERPS 272
+L L+ +P+
Sbjct: 224 LLHLASKPT 232
>gi|327398735|ref|YP_004339604.1| chemotaxis MotA protein [Hippea maritima DSM 10411]
gi|327181364|gb|AEA33545.1| chemotaxis MotA protein [Hippea maritima DSM 10411]
Length = 281
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 138/270 (51%), Gaps = 3/270 (1%)
Query: 6 GLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF 65
G+ +T+L ++G F GGNP +LIQ E +++ GA G + +K + +L I
Sbjct: 5 GIVLTLLAVVGAFVYEGGNPAVLIQIGEYIVLFGAFFGMLLSNASPSALKGAFGVILGIA 64
Query: 66 GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTF 125
+ Y ++LK++Y L ++K E +DDP +S I L+N E +
Sbjct: 65 KPDPYNKKNYLELLKIVYDLSTKVRKDGILSLEAVVDDPESSPILQDAAFFLKNKEARSL 124
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D +R I+ G ++E ++D I+ I E + P + + ES+P +GIV A++G+I
Sbjct: 125 LIDALRNIVTG-IEVEKLEEMLDTNIESIEKEAMAPAKMVGTLAESMPGMGIVAAVMGVI 183
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
MG L S ++G I +LTGT LG+++ Y + P+ ++ + + Y+ K
Sbjct: 184 LTMGALGGSILVIGEHIAAALTGTFLGLLMCYGIFGPM-AKYAEFKTEDMVAYLNALKTG 242
Query: 246 IAYM-NGAIPQVAIEYGRKVLPLSERPSIE 274
I Y+ G P +A+E R+ +P RP +
Sbjct: 243 IIYIAKGDAPIIAMEAVRESIPPLARPEFD 272
>gi|170022979|ref|YP_001719484.1| MotA/TolQ/ExbB proton channel [Yersinia pseudotuberculosis YPIII]
gi|169749513|gb|ACA67031.1| MotA/TolQ/ExbB proton channel [Yersinia pseudotuberculosis YPIII]
Length = 201
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 108/184 (58%)
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD 148
+ +G + HI+ P NS++F P +L++ L TFI D R++ +G +E+E++++
Sbjct: 2 VDEGGLKRLDEHIEIPANSSVFQRYPLILQDLHLITFISDNFRLMAMGKINQHELESILE 61
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTG 208
+E+ + E L P + +GE++P GI A+LGII M ++ S ++G + +L G
Sbjct: 62 QELSAVEEELLVPSRSFQRIGEAMPGFGICAAVLGIIITMQSIDGSIAMIGIKVAAALVG 121
Query: 209 TLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLS 268
T LG+ + Y L +PL++ ++ K+ L+ V+ L+ ++ G +A++ GRK+LP+
Sbjct: 122 TFLGVFICYCLMDPLSNAMEQEIKKKLALFECVRMVLVNHVAGKPSLLAVDAGRKMLPMD 181
Query: 269 ERPS 272
+P+
Sbjct: 182 NKPT 185
>gi|229837432|ref|ZP_04457595.1| Flagellar motor rotation protein motA [Yersinia pestis Pestoides A]
gi|229705555|gb|EEO91565.1| Flagellar motor rotation protein motA [Yersinia pestis Pestoides A]
Length = 210
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 108/184 (58%)
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD 148
+ +G + HI+ P NS++F P +L++ L TFI D R++ +G +E+E++++
Sbjct: 11 VDEGGLKRLDEHIEIPANSSVFQRYPLILQDLHLITFISDNFRLMAMGKINQHELESILE 70
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTG 208
+E+ + E L P + +GE++P GI A+LGII M ++ S ++G + +L G
Sbjct: 71 QELSAVEEELLVPSRSFQRIGEAMPGFGICAAVLGIIITMQSIDGSIAMIGIKVAAALVG 130
Query: 209 TLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLS 268
T LG+ + Y L +PL++ ++ K+ L+ V+ L+ ++ G +A++ GRK+LP+
Sbjct: 131 TFLGVFICYCLMDPLSNAMEQEIKKKLALFECVRMVLVNHVAGKPSLLAVDAGRKMLPMD 190
Query: 269 ERPS 272
+P+
Sbjct: 191 NKPT 194
>gi|78484730|ref|YP_390655.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78363016|gb|ABB40981.1| MotA/TolQ/ExbB family protein [Thiomicrospira crunogena XCL-2]
Length = 258
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 128/247 (51%), Gaps = 2/247 (0%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ L P E+V++ G GLG F+ + P+ + + L FG + + Y +VL L
Sbjct: 3 GGSLISLWHPAELVVIIGLGLGVFLGSTPVYIWLKTMTYLGRYFGGGRVNKKIYVEVLGL 62
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
L L + ENH+ P +S+IF P +L++ EL FI D +++ ++
Sbjct: 63 LDELSRLARSQGLLALENHVVAPESSSIFAKYPLILKHKELKKFIVDNFGYLLLNPPQAL 122
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI--LG 199
EN + ++I+ I ++ A + +P GI+ A++G+I M L + +G
Sbjct: 123 SFENYLHDQIEDITQSMMEVPKATGKIANLMPGFGIIAAVMGVILTMNLLGGDMDVAKIG 182
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
+IGV+L GTL GI +++S+ P T ++ + ++++V L A+ +G P +A+E
Sbjct: 183 NSIGVALVGTLTGIFVAFSIIAPFTHAVEVMIRQDKAIFVVVASFLTAFAHGVSPSMALE 242
Query: 260 YGRKVLP 266
GR+ +P
Sbjct: 243 VGRQRIP 249
>gi|322649510|gb|EFY45943.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
Length = 174
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 99/174 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+ FI DY+R+II GN +EIE LMDEEI+ E P ++++ +G+SLPA
Sbjct: 121 VMLDFIVDYLRLIISGNMNPFEIEALMDEEIETHESEAEVPANSLAMVGDSLPA 174
>gi|330899882|gb|EGH31301.1| flagellar motor protein MotA [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 181
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKVMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IF P V
Sbjct: 61 S----LKMFGTR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L++ +T +ICDY+R++ GN +E+E L D E+ + + P HAI+ + + +P G
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEDLEHPSHAITGIADGMPGFG 175
Query: 177 IVGAIL 182
IV A+L
Sbjct: 176 IVAAVL 181
>gi|149191180|ref|ZP_01869438.1| MotA/TolQ/ExbB proton channel [Vibrio shilonii AK1]
gi|148835018|gb|EDL51997.1| MotA/TolQ/ExbB proton channel [Vibrio shilonii AK1]
Length = 288
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG+ I + I GGF +GG + + EI+I+ GA +M+ +K
Sbjct: 1 MQKLIGIVIVLSVIFGGFIFLGGKFEFIFKLSEIIIIFGAAFASLLMSTTSATMKLMAQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +D Y +L L++ L+ + + + H+++P +S IF+ P + +
Sbjct: 61 VGIAFRSTPYNKDYYQQLLSLMFELINTARVQNIKALDIHVENPDSSKIFSKYPKITSDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T FI D R +I G + +E ++EEI+ + E KP + E++P +GI+ A
Sbjct: 121 LTTQFIIDSFRQVITGKQSQHVLEAFLEEEIEHLEDEYTKPSEKLHATAEAMPGLGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L +G I +L GT G+ Y + P++S IK Q +
Sbjct: 181 VMGIILTMQGLDGEISEIGQNIAGALVGTFTGVFGCYCVLGPMSSSIKDVSENQLAPLLC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L AY G + GRK + +PS
Sbjct: 241 VKSILSAYAQGQSAHMCANAGRKNIETRYKPSF 273
>gi|148974249|ref|ZP_01811782.1| MotA/TolQ/ExbB proton channel [Vibrionales bacterium SWAT-3]
gi|145965946|gb|EDK31194.1| MotA/TolQ/ExbB proton channel [Vibrionales bacterium SWAT-3]
Length = 290
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG+ + + I GGF +GG + + EI+I+ GA +M+ +K
Sbjct: 1 MQKLIGIVVVLSVIFGGFIFLGGKFEFIFKLSEIIIIFGAAFASLLMSTTSSTLKLMVQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +D Y +L L++ L+ + + + H+++P +S IF P + ++
Sbjct: 61 VGIAFRSTPYNKDYYQQLLSLMFELINTARVKNIKALDIHVENPESSKIFAKYPRITKDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T FI D R +I G + +E ++EEI+ + E KP + E++P +GI+ A
Sbjct: 121 LTTQFIIDSFRQVITGKQSQHLLEAFLEEEIEHLEDEYTKPSEKLHATAEAMPGLGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L +G I +L GT G+ Y + P++S IK Q +
Sbjct: 181 VMGIILTMQGLDGEISEIGKNIAGALVGTFTGVFGCYCVLGPMSSSIKDVSENQLAPLLC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L AY G + GRK + +PS
Sbjct: 241 VKSILSAYAQGQSAHMCANAGRKNIETRYKPSF 273
>gi|260768754|ref|ZP_05877688.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|260616784|gb|EEX41969.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
Length = 285
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 1/266 (0%)
Query: 8 FITILCIIG-GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFG 66
F+ IL II F GG LI EI I+ G + G ++A+ +K +
Sbjct: 7 FVVILIIIAVSFVLHGGRLGALISVAEIAIIFGCAICGMIIASKTATLKLMLQQVKISLS 66
Query: 67 YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFI 126
+ Y D+L L++ L+ K + + H+++P +S IF P++ + FI
Sbjct: 67 KSTYDRQYYQDLLSLMFELINVAKMQNLKALDAHVENPESSNIFAKYPSITRDENTLKFI 126
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
D R II ++++E ++EEI+ +L E KP + M E++P IGI+ A++GII
Sbjct: 127 VDSFRQIISSKMSAHDVEAALEEEIEKLLEEYKKPSEKMHAMAEAMPGIGILAAVMGIIL 186
Query: 187 AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
M L ++G +I +L GT GI Y L PL+ I+ +Q V+ +
Sbjct: 187 TMQYLDAEVSVIGQSIAGALVGTFTGIFGCYCLFGPLSQAIQEVAEEQIAPLQCVRCIIS 246
Query: 247 AYMNGAIPQVAIEYGRKVLPLSERPS 272
AY P + + GR+ + L +P+
Sbjct: 247 AYCQNLSPHMCVNAGRRQIELHHKPT 272
>gi|119385357|ref|YP_916413.1| flagellar motor protein [Paracoccus denitrificans PD1222]
gi|119375124|gb|ABL70717.1| flagellar motor protein [Paracoccus denitrificans PD1222]
Length = 166
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 126 ICDYMRMIIVGNAR----SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+C + + GN R SY++E ++ + I ++ E + HA+ +M ++LPA+GIV A+
Sbjct: 1 MCPFRCLDFQGNFRDCHSSYQVEEMLSQRIGLMNEETMHAPHALQNMADALPALGIVAAV 60
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+IK M ++ Q P++LG IG +L GT LG+ L+Y++ P ++ + + Y ++
Sbjct: 61 LGVIKTMSSIDQPPEVLGKMIGGALVGTFLGVFLAYAIVAPFAQRLGAVTKQDQAFYDVI 120
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
K L+A ++ + +E GR+ P RPS
Sbjct: 121 KSVLVAGLHQHATNLCVEVGRQSAPDHVRPSF 152
>gi|315180457|gb|ADT87371.1| MotA/TolQ/ExbB proton channel [Vibrio furnissii NCTC 11218]
Length = 285
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 1/266 (0%)
Query: 8 FITILCIIG-GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFG 66
F+ IL II F GG LI EI I+ G + G ++A+ +K +
Sbjct: 7 FVVILIIIAVSFVLHGGRLGALISVAEIAIIFGCAICGMIIASKTATLKLMLQQVKISLS 66
Query: 67 YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFI 126
+ Y D+L L++ L+ K + + H+++P +S IF P + + FI
Sbjct: 67 KSTYDRQYYQDLLSLMFELINVAKMQNLKALDAHVENPESSNIFAKYPAITRDENTLKFI 126
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
D R II ++++E ++EEI+ +L E KP + M E++P IGI+ A++GII
Sbjct: 127 VDSFRQIISSKMSAHDVEAALEEEIEKLLEEYKKPSEKMHAMAEAMPGIGILAAVMGIIL 186
Query: 187 AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
M L ++G +I +L GT GI Y L PL+ I+ +Q V+ +
Sbjct: 187 TMQYLDAEVSVIGQSIAGALVGTFTGIFGCYCLFGPLSQAIQEVAEEQIAPLQCVRCIIS 246
Query: 247 AYMNGAIPQVAIEYGRKVLPLSERPS 272
AY P + + GR+ + L +P+
Sbjct: 247 AYCQNLSPHMCVNAGRRQIELHHKPT 272
>gi|330872238|gb|EGH06387.1| flagellar motor protein MotA [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 161
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKD 56
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP + V K
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMTMHVFKK 60
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
S L++FG + Y +VL L+Y ++ ++ E I+D +S IF P V
Sbjct: 61 S----LKMFGSR-FTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEI 151
L++ +T +ICDY+R++ GN +E+E L D E+
Sbjct: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMEL 150
>gi|289808525|ref|ZP_06539154.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 128
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%)
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + Y D+L LLY LM ++ E I++P S IF S P +L + +
Sbjct: 11 LFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAVML 70
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A+
Sbjct: 71 DFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAV 128
>gi|2772919|gb|AAB96641.1| MotA [Salmonella enterica subsp. enterica serovar Typhimurium]
Length = 137
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGN 137
+ FI DY+R+II GN
Sbjct: 121 VMLDFIVDYLRLIISGN 137
>gi|329298549|ref|ZP_08255885.1| flagellar motor protein MotA [Plautia stali symbiont]
Length = 159
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 75/128 (58%)
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLC 220
P +++ +G+ LPA GIV A++G++ A+ + + LG I ++ GT LGI+L+Y
Sbjct: 25 PAQSLAAVGDGLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFI 84
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+PL S ++ + ++ VK L++ +NG PQ+A+E+GRK L +ERPS + + V
Sbjct: 85 SPLASVLRQKCAETTKMMQCVKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFTELEEHV 144
Query: 281 LQYNHNKK 288
+ K
Sbjct: 145 RNAKNPAK 152
>gi|261418452|ref|YP_003252134.1| flagellar motor protein MotA [Geobacillus sp. Y412MC61]
gi|319767587|ref|YP_004133088.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y412MC52]
gi|261374909|gb|ACX77652.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y412MC61]
gi|317112453|gb|ADU94945.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y412MC52]
Length = 263
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 132/277 (47%), Gaps = 37/277 (13%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + ++ + G Y G +P +LI P I+I+ V+A P + IK V
Sbjct: 4 TSVIGIILGVIAVGLGMYFKGVSPAVLINPAAILIILVGTAAAVVIAFPTQEIKK--VPK 61
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE-------TENHIDDPYNSTIFTSIP 114
L +K + ++ ++ L L + +R E + IDDP
Sbjct: 62 L----FKVIFTESTTPTVEQLIPLFVDWANIARREGLLALEAKLDDIDDP---------- 107
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLP 173
F+ + + M I G + + I ++M EEI + + E+ + AI S G P
Sbjct: 108 ----------FLRNGLSMAIDGQTQEF-IRDVMTEEI-VAMEERHEANAAIFSQAGTYAP 155
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+G++GA++G+I A+GN+ + LG AI + T+LGI Y L +P ++++ +
Sbjct: 156 TLGVLGAVIGLIAALGNMENIAE-LGKAISAAFVATMLGIFTGYVLWHPFANKLRRKSKE 214
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ R+ I+ + +++ + G P++ + LP SER
Sbjct: 215 EARVRYIMIEGVLSILEGQAPRMIEQKLASYLPESER 251
>gi|297529304|ref|YP_003670579.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. C56-T3]
gi|297252556|gb|ADI26002.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. C56-T3]
Length = 263
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 31/274 (11%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIG+ + ++ + G Y G +P +LI P I+I+ ++A P+K IK
Sbjct: 4 TSIIGIILGVIAVGLGMYFKGVSPAVLINPAAILIILVGTAAAVIIAFPMKEIKKVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKG----SRNETENHIDDPYNSTIFTSIPTVL 117
IF D L L++ N+ + + N IDDP
Sbjct: 64 KIIFTEPP---TPSIDELIPLFVDWANIARREGLLALEAKLNDIDDP------------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIG 176
F+ + + M I G + + I ++M EEI + + E+ + AI + G P +G
Sbjct: 108 -------FLRNGLSMAIDGQTQEF-IRDVMTEEI-VAMEERHEANAAIFTQAGTYAPTLG 158
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++GA++G+I A+GN+ + LG AI + T+LGI Y L +P ++++ ++ R
Sbjct: 159 VLGAVVGLIAALGNMDNISE-LGHAISAAFVATMLGIFTGYVLWHPFANKLRRKSKEEAR 217
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ I+ + +++ + G P++ + LP SER
Sbjct: 218 VRYIMVEGVLSILEGQAPRMIEQKLASYLPESER 251
>gi|312110142|ref|YP_003988458.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y4.1MC1]
gi|311215243|gb|ADP73847.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y4.1MC1]
Length = 263
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 37/280 (13%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIG+ + I+ + G Y G +P +LI P I+I+ + +A P + IK +
Sbjct: 4 TSIIGIILGIVAVGVGMYLKGVHPSVLINPAAILIILVGTMASVTVAFPTREIK----KV 59
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE-------TENHIDDPYNSTIFTSIP 114
++FG L ++ ++ L + + +R E + IDDP
Sbjct: 60 PKLFG--VLFKEQNIPTIEQLIPMFVDWANIARREGLLALEAKLDEIDDP---------- 107
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLP 173
F+ + + M I G + + I ++M EEI+ + E+ + AI S G P
Sbjct: 108 ----------FLRNGLSMAIDGQTQDF-IRDVMTEEIE-AMEERHEANAAIFSQAGTYAP 155
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+G++GA++G+I A+ N+ +I G AI + TLLGI Y L +P ++++ +
Sbjct: 156 TLGVLGAVIGLIAALSNMDNISEI-GKAISAAFVATLLGIFTGYVLWHPFANKLRRKSKE 214
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ ++ ++ + +++ + G P+ + LP +ER I
Sbjct: 215 EAKIRQVMIEGVLSILEGQAPRTIEQKLASYLPATERKKI 254
>gi|56421065|ref|YP_148383.1| flagellar motor protein MotA [Geobacillus kaustophilus HTA426]
gi|56380907|dbj|BAD76815.1| motility protein A (flagellar motor rotation) [Geobacillus
kaustophilus HTA426]
Length = 263
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 37/277 (13%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + ++ + G Y G +P +LI P I+I+ V+A P IK V
Sbjct: 4 TSVIGIILGVIAVGLGMYFKGVSPAVLINPAAILIILVGTAAAVVIAFPTHEIKK--VPK 61
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE-------TENHIDDPYNSTIFTSIP 114
L +K + ++ ++ L L + +R E + IDDP
Sbjct: 62 L----FKVIFTESTTPTVEQLIPLFVDWANIARREGLLALEAKLDDIDDP---------- 107
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLP 173
F+ + + M I G + + I ++M EEI + + E+ + AI S G P
Sbjct: 108 ----------FLRNGLSMAIDGQTQEF-IRDVMTEEI-VAMEERHEANAAIFSQAGTYAP 155
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+G++GA++G+I A+GN+ + LG AI + T+LGI Y L +P ++++ +
Sbjct: 156 TLGVLGAVIGLIAALGNMENIAE-LGKAISAAFVATMLGIFTGYVLWHPFANKLRRKSKE 214
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ R+ I+ + +++ + G P++ + LP +ER
Sbjct: 215 EARVRYIMIEGVLSILEGQAPRMIEQKLASYLPENER 251
>gi|295399257|ref|ZP_06809239.1| MotA/TolQ/ExbB proton channel [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978723|gb|EFG54319.1| MotA/TolQ/ExbB proton channel [Geobacillus thermoglucosidasius
C56-YS93]
Length = 263
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 37/280 (13%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIG+ + I+ + G Y G +P +LI P I+I+ + +A P + IK +
Sbjct: 4 TSIIGIILGIVAVGVGMYLKGVHPSVLINPAAILIILVGTMASVTVAFPTREIK----KV 59
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE-------TENHIDDPYNSTIFTSIP 114
++FG L ++ ++ L + + +R E + IDDP
Sbjct: 60 PKLFG--VLFKEQNIPTIEELIPMFVDWANIARREGLLALEAKLDEIDDP---------- 107
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLP 173
F+ + + M I G + + I ++M EEI+ + E+ + AI S G P
Sbjct: 108 ----------FLRNGLSMAIDGQTQDF-IRDVMTEEIE-AMEERHEANAAIFSQAGTYAP 155
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+G++GA++G+I A+ N+ +I G AI + TLLGI Y L +P ++++ +
Sbjct: 156 TLGVLGAVIGLIAALSNMDNISEI-GKAISAAFVATLLGIFTGYVLWHPFANKLRRKSKE 214
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ ++ ++ + +++ + G P+ + LP +ER I
Sbjct: 215 EAKIRQVMIEGVLSILEGQAPRTIEQKLASYLPATERKKI 254
>gi|239827802|ref|YP_002950426.1| flagellar motor protein MotA [Geobacillus sp. WCH70]
gi|239808095|gb|ACS25160.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. WCH70]
Length = 263
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 37/265 (13%)
Query: 17 GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC 76
G Y G NP +LI P I+I+ + +A P + IK + ++FG L ++
Sbjct: 19 GMYFKGVNPSVLINPAAILIIIVGTIASVTIAFPTREIK----KVPKLFG--VLFKEQNI 72
Query: 77 DVLKLLYILMYNLKKGSRNE-------TENHIDDPYNSTIFTSIPTVLENNELTTFICDY 129
++ L L + +R E + IDDP F+ +
Sbjct: 73 PTIEELIPLFVDWANVARREGLLALEAKLDEIDDP--------------------FLRNG 112
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIVGAILGIIKAM 188
+ M I G + + I ++M EEI+ + E+ + AI S G P +G++GA++G+I A+
Sbjct: 113 LSMAIDGQTQDF-IRDVMTEEIE-AMEERHEANAAIFSQAGTYAPTLGVLGAVIGLISAL 170
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
GN+ + LG AI + TLLGI Y L +P ++++ ++ ++ ++ + +++
Sbjct: 171 GNIDNISE-LGKAISAAFVATLLGIFTGYVLWHPFANKLRRKSKEEAKIRRVMIEGVLSI 229
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSI 273
+ G P+ + LP +ER I
Sbjct: 230 LEGQAPRTIEQKLASYLPETERKKI 254
>gi|294498804|ref|YP_003562504.1| chemotaxis protein MotA [Bacillus megaterium QM B1551]
gi|295704126|ref|YP_003597201.1| chemotaxis protein MotA [Bacillus megaterium DSM 319]
gi|294348741|gb|ADE69070.1| chemotaxis protein MotA [Bacillus megaterium QM B1551]
gi|294801785|gb|ADF38851.1| chemotaxis protein MotA [Bacillus megaterium DSM 319]
Length = 264
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 31/277 (11%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++ IGL + I +I G + G NP +L P I+I+ +G V+A P IK +
Sbjct: 4 TSFIGLILGIASLIVGMFFKGVNPSVLGNPAAILIIIVGTVGAVVIAFPSNEIK----RV 59
Query: 62 LEIFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI---DDPYNSTIFTSIPTV 116
++FG +K D++ + ++K E I DDP
Sbjct: 60 PKLFGVLFKEQKMLQPVDLVSMFSEWGQVVRKEGLLSLEAQIIDVDDP------------ 107
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
F+ + + + I G + Y I +++ EEID + + G P +G
Sbjct: 108 --------FLKNGLNLAIDGQSADY-IRDVLSEEIDAMEERHQTGASIFALAGTYAPTLG 158
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++GA++G+I A+GN+ + LG AI + TLLGI Y L +P +++K + +
Sbjct: 159 VLGAVIGLIAALGNMEDT-DTLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKHEVK 217
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ ++ + +++ + G P+V + LP +ER +
Sbjct: 218 VKYMMIEGVLSLLEGETPKVIEQKLASYLPTAERKKL 254
>gi|289806506|ref|ZP_06537135.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 100
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%)
Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
+PA GIV A++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++
Sbjct: 1 MPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKS 60
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ ++ VK L++ +NG P +A+E+GRK L SERP
Sbjct: 61 AETTKMMQCVKITLLSNLNGYAPPIAVEFGRKTLYSSERP 100
>gi|89100892|ref|ZP_01173741.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
gi|89084379|gb|EAR63531.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
Length = 264
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 127/274 (46%), Gaps = 31/274 (11%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S++IG+ + I+ + G G +P L+ P I+I+ + +A P+ +K +
Sbjct: 4 SSLIGVILAIIGVGVGMVLKGVHPSALVNPAAILIIIVGTIAAVTIAFPMNELK----KV 59
Query: 62 LEIFG--YKALGQDTYCDVLKLLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTV 116
++FG +K Q +++++ +K + N I+DP
Sbjct: 60 PKLFGILFKERKQMVPAELIRMFSEWAQLARKEGLLALEAKTNEIEDP------------ 107
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
F+ + + + + G + Y I +++ EEI+ + L + G P +G
Sbjct: 108 --------FLKNGLSLAVDGQSADY-IRDVLSEEIESMEERHLSGAAIFTQAGTYAPTLG 158
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++GA++G+I A+G+++ + LG AI + TLLGI Y L +P +++K ++ +
Sbjct: 159 VLGAVVGLIAALGDMTNT-DALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQESK 217
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L ++ + +++ + G P+V + LP ER
Sbjct: 218 LKYMMIEGVLSILEGEAPRVIEQKLASYLPSGER 251
>gi|321445152|gb|EFX60610.1| hypothetical protein DAPPUDRAFT_342410 [Daphnia pulex]
Length = 133
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG +++ CI G + A GGN ++++ PFE+ + GA +G F+ N +KV+K +
Sbjct: 1 MFVIIGWAVSMACIFGVYIAHGGNMGVILKALPFEVTTILGAAIGAFLANNQMKVVKAAV 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L F + Y ++L L+Y ++ +K E ++DP++S +F PTV
Sbjct: 61 AGLGRCFKGSKFSKARYMELLALMYDILQKARKEGLMSIEKDVEDPHSSALFQKYPTVGN 120
Query: 119 NNELT 123
++ +T
Sbjct: 121 DHHVT 125
>gi|229543004|ref|ZP_04432064.1| MotA/TolQ/ExbB proton channel [Bacillus coagulans 36D1]
gi|229327424|gb|EEN93099.1| MotA/TolQ/ExbB proton channel [Bacillus coagulans 36D1]
Length = 267
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 29/273 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S+IIG+ + ++ I G G +P +L+ P ++I+ ++ P+ +K
Sbjct: 4 SSIIGVILGVVAIGTGMVLKGVSPAVLVNPAALLIILAGTAASVIIGFPMSELKK----- 58
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN-- 119
V KLL I+ K S E D + T LE
Sbjct: 59 ----------------VPKLLKIIFTEQKLMSTEEMIRFFSD-WAQTARREGLLALEARL 101
Query: 120 NELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGI 177
+E+ F+ + + + I G + Y I +++ EEI+ + E+ + AI S G P +G+
Sbjct: 102 DEVDDAFLKNGLSLAIDGQSAEY-IRDVLSEEIEA-MEERHQMGAAIFSQAGTYAPTLGV 159
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA+LG+I A+GN+S + ++LG AI + TLLGI Y L +P +++K + +
Sbjct: 160 LGAVLGLIAALGNMSDT-EVLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKNEAKN 218
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + +++ + G P+V + LP ER
Sbjct: 219 KEIMLEGILSILAGESPRVIEQKLASYLPNEER 251
>gi|319653377|ref|ZP_08007477.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
gi|317394861|gb|EFV75599.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
Length = 264
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 127/271 (46%), Gaps = 25/271 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG+ + I+ + G G +P +LI P I+I+ +A P IK +
Sbjct: 4 TTIIGVILGIIAVGVGMVFKGVSPSVLINPAAILIIILGTAAAVAIAFPTNEIK----RV 59
Query: 62 LEIFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
++FG +K +++K+ + + +R E ++ N +EN
Sbjct: 60 PKLFGILFKEEKLMNPAEMIKMFS----DWAQLARKEGLLALEVKTNE---------IEN 106
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
TF+ + + + + G + Y I +++ EEI+ + S G P++G++G
Sbjct: 107 ----TFLKNGLSLAVDGQSADY-IRDVLSEEIEAMEERHQAGAQIFSQAGTYAPSLGVLG 161
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++G+I A+GN+ + LG AI + TLLGI Y +P +++K ++ ++
Sbjct: 162 AVIGLIAALGNMEDTTS-LGHAISAAFVATLLGIFTGYVFWHPFANKLKRKSKQEAKIKS 220
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ + +++ + G P+V + LP ER
Sbjct: 221 MMIEGILSILEGEAPRVIEQKLASYLPAGER 251
>gi|322649568|gb|EFY46000.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
Length = 121
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
GIV A++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ +
Sbjct: 1 FGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAET 60
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 61 TKMMQCVKITLLSNLNGYAPPIAVEFGRKTLYSSERPSF 99
>gi|327438678|dbj|BAK15043.1| flagellar motor component [Solibacillus silvestris StLB046]
Length = 266
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 128/284 (45%), Gaps = 43/284 (15%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S+++G+ I + ++ G + G P +LI P I+I+ + +A P+K +K
Sbjct: 3 ISSVVGVIIAFIALLVGMFLKGVTPEVLINPAAILIIIFGTIAAVTIAFPMKELKRVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN---HIDDPYNSTIFTSIPTVL 117
+F L D D++K+ ++ E+ ++DP
Sbjct: 63 FKILFSETKLASD--IDLIKMFSQWADLARREGLLALESKAAEVEDP------------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA-----ISHMGESL 172
F+ + + + I G Y I +++ EE+ E ++ HA S G
Sbjct: 108 -------FLKNGLTLAIDGQNADY-IRDVLTEEV-----EAMEDRHASGAGIFSQAGTYA 154
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---S 229
P +G++GA++G+I A+ ++S K LG AI + TLLGI Y L +P +++K +
Sbjct: 155 PTLGVLGAVVGLIAALKDMSDIDK-LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSA 213
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+KQ ++ I + +++ + G P+V + L + ER I
Sbjct: 214 VEVKQKQMMI---EGILSVLEGEAPRVIEQKLASYLTMEERKQI 254
>gi|330872239|gb|EGH06388.1| flagellar motor protein MotA [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 113
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
+P GIV A+LGI+ M +L K +G +G +L GT GI+ +Y PL + +
Sbjct: 1 MPGFGIVAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATCLAHD 60
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ +Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 61 AKEEMNVYESIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 110
>gi|119385372|ref|YP_916428.1| chemotaxis protein MotA [Paracoccus denitrificans PD1222]
gi|119375139|gb|ABL70732.1| chemotaxis protein MotA [Paracoccus denitrificans PD1222]
Length = 148
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDS- 57
M +IG+ +T + GG+ GG +++ PFE++++ GA +G F+++N VIK +
Sbjct: 1 MFGMIGIVVTFAMVFGGYILAGGKLGVILHSLPFEMMMIGGAAVGSFLLSNETAVIKQAL 60
Query: 58 ---GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIP 114
G SL +++ QD C + +LL I + S E E HI+ P +S+IF + P
Sbjct: 61 GGIGRSLKGPRWHESDVQDVLCLLFQLLRI-----ARASPVELEEHIEKPESSSIFQAYP 115
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENL 146
+L + + T I D +R + Y++ +
Sbjct: 116 RILADEHVVTLIADTLRSASLNYDDPYQVADF 147
>gi|226310456|ref|YP_002770350.1| flagellar motor protein MotA [Brevibacillus brevis NBRC 100599]
gi|226093404|dbj|BAH41846.1| chemotaxis MotA protein [Brevibacillus brevis NBRC 100599]
Length = 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 37/277 (13%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ + I+ ++ G +P L+ P I+I+ + A P+ +K
Sbjct: 4 STLIGIVLGIVAVVVGMILKHASPMSLLNPAAIMIIIVGTIAALFNAFPMSEMKRIPALF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE-------TENHIDDPYNSTIFTSIP 114
IF + L + + L N +R E T + I+DP
Sbjct: 64 KIIFKEQKLPEK------RELIGQFMNWASIARREGLLALENTSDEIEDP---------- 107
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
F+ + M+MII G + + ++++EEI I S G P
Sbjct: 108 ----------FLRNGMKMIIDGGEPDF-VRDVLNEEIHAIEERHQAGALVFSQAGSYAPT 156
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+G++GA++G+I A+GNLS LG +I + TLLGI Y L +P +++K +
Sbjct: 157 LGVLGAVVGLIAALGNLSDI-DALGISIAAAFVATLLGIFTGYVLWHPFATKLKRKSKAE 215
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKV-LPLSER 270
+ I+ + L++ G P AIE V +P ER
Sbjct: 216 IEIKKIMVEGLLSIQAGVSP-TAIEQKLLVYIPYQER 251
>gi|212638650|ref|YP_002315170.1| flagellar motor protein MotA [Anoxybacillus flavithermus WK1]
gi|212560130|gb|ACJ33185.1| Flagellar motor protein A [Anoxybacillus flavithermus WK1]
Length = 304
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 125/276 (45%), Gaps = 35/276 (12%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IGL + I+ + G G +P +LI P I+I+ +A P K I +
Sbjct: 42 TSLIGLILGIIAVGVGMVFKGVSPSVLINPAAILIILLGTAAAVTIAFPTKEIS----KV 97
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE-------TENHIDDPYNSTIFTSIP 114
++FG + ++ ++ L L +R E IDDP
Sbjct: 98 PKLFG--VIFKEPKTPKIEELIPLFVEWANIARREGLLALEAKVAEIDDP---------- 145
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
F+ + + + I G ++ + I ++M EEI+ + L + G P
Sbjct: 146 ----------FLRNGLSLAIDGQSQEF-IRDVMTEEIEAMEERHLANATIFTQAGTYAPT 194
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+G++GA++G+I A+ ++S + LG AI + TL+GI Y L +P +++K ++
Sbjct: 195 LGVLGAVVGLIAALQDMSDIER-LGHAISAAFVATLMGIFTGYVLWHPFANKLKRKSKEE 253
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + +++ + G P+ + LP+SER
Sbjct: 254 IKVRQVMIEGVLSIIEGQAPRAIEQKLASYLPMSER 289
>gi|157692041|ref|YP_001486503.1| flagellar motor protein MotA [Bacillus pumilus SAFR-032]
gi|157680799|gb|ABV61943.1| flagellar motor protein A [Bacillus pumilus SAFR-032]
Length = 264
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 127/274 (46%), Gaps = 21/274 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + LI P I+I+ + V+A P IK +
Sbjct: 4 TSLIGIILAFIALSVGMVLKGVSLTALINPAAILIIVVGTIAAVVIAFPSSEIKKTPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+IF +D ++ + L N + +R E ++ SI V ++
Sbjct: 64 GKIF------KDNKLPTIQEMIPLFSNWAQIARREGLLALE--------ASIEEVDDD-- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M + G + + I +++ EE+D + + G P +G++GA+
Sbjct: 108 ---FLKNGLSMAVDGQSAEF-IRDVLTEEVDAMAERHQSGALIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ N+ + LG AI + TLLGI Y L +P +++K ++ +L +I+
Sbjct: 164 VGLIAALANMGDI-EALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEVKLRLIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ +++ + G P+V + LP ER ++ I
Sbjct: 223 IEGILSVLEGQSPKVIEQKLLMYLPAKERANLVI 256
>gi|194014874|ref|ZP_03053491.1| chemotaxis protein MotA (Motility protein A) [Bacillus pumilus ATCC
7061]
gi|194013900|gb|EDW23465.1| chemotaxis protein MotA (Motility protein A) [Bacillus pumilus ATCC
7061]
Length = 264
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 127/274 (46%), Gaps = 21/274 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + LI P I+I+ + V+A P IK +
Sbjct: 4 TSLIGIILAFIALSVGMVLKGVSLTALINPAAILIIVVGTIAAVVIAFPSSEIKKTPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+IF +D ++ + L N + +R E ++ SI V ++
Sbjct: 64 GKIF------KDNKLPTIQEMIPLFSNWAQIARREGLLALE--------ASIEEVDDD-- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M + G + + I +++ EE+D + + G P +G++GA+
Sbjct: 108 ---FLKNGLSMAVDGQSAEF-IRDVLTEEVDAMSERHQSGALIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ N+ + LG AI + TLLGI Y L +P +++K ++ +L +I+
Sbjct: 164 VGLIAALANMGDI-EALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEVKLRLIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ +++ + G P+V + LP ER ++ I
Sbjct: 223 IEGILSVLEGQSPKVIEQKLLMYLPAKERANLVI 256
>gi|315644425|ref|ZP_07897558.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
gi|315280175|gb|EFU43468.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
Length = 266
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 27/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIGL I I+ ++ G G + L P +I+ G + PL +K
Sbjct: 3 ISTIIGLIIGIVAVVVGMLLKGASLLALYNPAAYLIILGGTAATLFIGFPLVELKKIPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + L T D++KL ++ E +D+ +
Sbjct: 63 VKMTFLKQNLMDKT--DMIKLFMEWASITRREGLLALETKVDEIDD-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI--SHMGESLPAIGIV 178
TF+ + MRMII GN + + + LM+ DI E+ A+ S G P++G++
Sbjct: 107 ---TFLRNGMRMIIDGNDQEFVRDVLME---DINATEERHRSGALIFSQAGMYAPSLGVL 160
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I A+ ++ + L AIG + TLLGI Y +C+P+ +++K ++ +
Sbjct: 161 GAVIGLIAALSHMEDMGE-LAHAIGAAFIATLLGIFTGYVICHPIANKLKRLSKREVEIR 219
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKV-LPLSERPSI 273
+++ + L++ +G + +AI V L SER +
Sbjct: 220 LMMVEGLLSIQSG-VSTIAINQKLSVFLTPSERAEL 254
>gi|261403962|ref|YP_003240203.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
gi|329930229|ref|ZP_08283842.1| chemotaxis protein MotA [Paenibacillus sp. HGF5]
gi|261280425|gb|ACX62396.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
gi|328935251|gb|EGG31732.1| chemotaxis protein MotA [Paenibacillus sp. HGF5]
Length = 266
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 23/274 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIGL I I+ ++ G G + L P +I+ G + PL +K
Sbjct: 3 ISTIIGLIIGIVAVLVGMILKGASLLALYNPAAYLIILGGTAATLFIGFPLSELKKIPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + L T D++KL ++ E +D+ +S
Sbjct: 63 VKMTFVKQNLMDKT--DMIKLFMEWASITRREGLLALETKVDEIDDS------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + MRMII GN + + + +++ E+I+ S G P++G++GA
Sbjct: 108 ----FLRNGMRMIIDGNDQEF-VRDVLMEDINATEERHRSGSLIFSQAGMYAPSLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+ ++ + L AIG + TLLGI Y +C+P+ +++K ++ + ++
Sbjct: 163 VIGLIAALSHMEDMGE-LAHAIGAAFIATLLGIFTGYVICHPIANKLKRLSKREVEIRLM 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV-LPLSERPSI 273
+ + L++ +G + +AI V L SER +
Sbjct: 222 MVEGLLSIQSG-VSTIAINQKLSVFLTPSERAEL 254
>gi|196248996|ref|ZP_03147696.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. G11MC16]
gi|196211872|gb|EDY06631.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. G11MC16]
Length = 263
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++++G+ + ++ + G Y G +LI P ++I+ + +A P + IK L
Sbjct: 4 TSVVGVILGVIAVGLGMYFKGVALSVLINPAALLIIFVGTVAAVTIAFPTREIKKVPKLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKG----SRNETENHIDDPYNSTIFTSIPTVL 117
IF A+ + L +++ N+ + + + IDDP
Sbjct: 64 KIIFTEPAI---PTVEQLIPMFVDWANIARREGLLALEAKLDDIDDP------------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIG 176
F+ + + M I G + + I ++M EEI + E+ + AI +H G P +G
Sbjct: 108 -------FLRNGLSMAIDGQTQEF-IRDVMTEEIAA-MEERHEANAAIFTHAGTYAPTLG 158
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++GA++G+I A+GN+ + LG AI + TLLGI Y L +P ++++ ++ +
Sbjct: 159 VLGAVIGLIAALGNMENIAE-LGQAISAAFVATLLGIFSGYVLWHPFANKLRRKSKEEAK 217
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ I+ + +++ + G P++ + L SER +
Sbjct: 218 VRYIMIEGVLSILEGQAPRMIEQKLASYLSESERRQV 254
>gi|330903398|gb|EGH33970.1| flagellar motor protein MotA [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 110
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 175 IGIVGAILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+GI A+LGI+ M +L K +G +G +L GT GI+ +Y PL + + +
Sbjct: 1 MGIGAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKE 60
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ +Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 61 EMNVYEAIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAV 107
>gi|138896103|ref|YP_001126556.1| flagellar motor protein MotA [Geobacillus thermodenitrificans
NG80-2]
gi|134267616|gb|ABO67811.1| Motility protein A [Geobacillus thermodenitrificans NG80-2]
Length = 263
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++++G+ + ++ + G Y G +LI P ++I+ + +A P + IK L
Sbjct: 4 TSVVGVILGVIAVGLGMYFKGVALSVLINPAALLIIFVGTVAAVTIAFPTREIKKVPKLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKG----SRNETENHIDDPYNSTIFTSIPTVL 117
IF A+ + L +++ N+ + + + IDDP
Sbjct: 64 KIIFTEPAI---PTVEQLIPMFVDWANIARREGLLALEAKLDDIDDP------------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIG 176
F+ + + M I G + + I ++M EEI + E+ + AI +H G P +G
Sbjct: 108 -------FLRNGLSMAIDGQTQEF-IRDVMTEEIAA-MEERHEANAAIFTHAGTYAPTLG 158
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++GA++G+I A+GN+ + LG AI + TLLGI Y L +P ++++ ++ +
Sbjct: 159 VLGAVIGLIAALGNMENIGE-LGQAISAAFVATLLGIFSGYVLWHPFANKLRRKSKEEAK 217
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ I+ + +++ + G P++ + L SER +
Sbjct: 218 VRYIMIEGVLSILEGQAPRMIEQKLASYLSESERRQV 254
>gi|300855152|ref|YP_003780136.1| putative flagellar motor protein MotA [Clostridium ljungdahlii DSM
13528]
gi|300435267|gb|ADK15034.1| predicted flagellar motor protein MotA [Clostridium ljungdahlii DSM
13528]
Length = 263
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
++ + ++ K+L +L N K N + D + T + ++ N L + ++M+
Sbjct: 53 KEEFLNIPKILKVLFKNRKTDDPVAIINQLVDMSHQTRKNGLLSI--ENTLQSLDNEFMK 110
Query: 132 ----MIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAIGIVGAILGII 185
M++ G Y IE L E++I E+ A ++ G S P +G++GA++G+I
Sbjct: 111 KGLEMVVDGVEPQYIIEVL---ELEIENREERHRAGASTMTTAGGSAPTLGVLGAVIGLI 167
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
A+GNL + K LG I + TL GI L Y +C+P S++K ++ R I+ +
Sbjct: 168 GALGNLDDTEK-LGHMIAAAFVATLYGIFLGYVICHPFASRLKRKSQEEIRTMHIIMSGV 226
Query: 246 IAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+A +G P+ + +LP R ++E
Sbjct: 227 LAIQSGNNPKSIEQKLVSMLPPKLRKNME 255
>gi|169831940|ref|YP_001717922.1| MotA/TolQ/ExbB proton channel [Candidatus Desulforudis audaxviator
MP104C]
gi|169638784|gb|ACA60290.1| MotA/TolQ/ExbB proton channel [Candidatus Desulforudis audaxviator
MP104C]
Length = 272
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 36/260 (13%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T++G+F + ++ GF G+ LI P + +V G L +
Sbjct: 9 TTLLGIFAALSFVVVGFILKDGHLSSLIVPAAMAVVFGCTLSASI--------------- 53
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN--HIDDPYNSTIFTSIPTVLEN 119
L + DV + L +L+++ K E + + + LE
Sbjct: 54 ------ATLRKVDISDVFRSLRMLVHHRAKSPTEMIEEIVSLAEKARREGLLYLENYLEG 107
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH-----MGESLPA 174
+ F+ ++++I G A ++ +++ E LY L+ H ++H G P
Sbjct: 108 VD-DLFLRKGLQLVIDG-AEPEVVKGVLETE----LY-ALEERHRVAHEFFETAGSFAPT 160
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+GI GAI+G+I A+GN+ Q P LG AI + TL G++ +Y +C P+ +++K+ K+
Sbjct: 161 MGIAGAIMGLIVALGNI-QEPDKLGPAIASAFVATLYGVVFAYCICFPIATKLKTLTAKE 219
Query: 235 HRLYIIVKKALIAYMNGAIP 254
L +V++ +IA +G P
Sbjct: 220 VMLRQLVREGVIALQSGNNP 239
>gi|134298232|ref|YP_001111728.1| flagellar motor protein MotA [Desulfotomaculum reducens MI-1]
gi|134050932|gb|ABO48903.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum reducens MI-1]
Length = 268
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
STIIGLF+ I I G G + L P I+I+ +A P+ +K
Sbjct: 4 STIIGLFLGITAISVGMVLKGAHLSSLWNPAAIMIIFVGTAASLFIAFPMSELKK----- 58
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN---HIDDPYNSTIFTSIPTVLE 118
+ +LL I + K ++ E N + S+ + LE
Sbjct: 59 ----------------IPRLLKITLQEPKLMAKREVVNTFVALASTARREGLLSLESQLE 102
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ + ++ M+MII G+ + ++ +M+EEI + G P +G++
Sbjct: 103 SID-DPYLRGGMQMIIDGSDAEF-VKFVMEEEIYATEERHRSGALIFTQAGTYAPTLGVL 160
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I A+GNLS K LG +I + TLLGI Y L +P+ +++K K+ +
Sbjct: 161 GAVVGLIAALGNLSDIEK-LGHSIAAAFVATLLGIFSGYVLWHPIANKLKRISKKEMEIK 219
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKV-LPLSERPS 272
++ + ++A G P +AIE V L SER S
Sbjct: 220 QMIVEGVLAIQTGRSP-IAIEQQLLVYLSPSERSS 253
>gi|23010576|ref|ZP_00051216.1| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 66
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 45/63 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL I I C++GGF AMGG+ ++ QP+E VI+ G G FV+ANPLKV+ DSG +
Sbjct: 1 MGILVGLVIAIGCMLGGFVAMGGHLIVIWQPWEFVIIGGMAAGTFVIANPLKVVMDSGKA 60
Query: 61 LLE 63
+E
Sbjct: 61 TME 63
>gi|39998118|ref|NP_954069.1| chemotaxis MotA protein [Geobacter sulfurreducens PCA]
gi|39985063|gb|AAR36419.1| chemotaxis MotA protein [Geobacter sulfurreducens PCA]
gi|298507056|gb|ADI85779.1| chemotaxis MotA protein [Geobacter sulfurreducens KN400]
Length = 254
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 38/263 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + + GG G + LIQP +IV G G ++ P+K I +
Sbjct: 3 IATIIGLVMGFGAVFGGALLEGLHLTALIQPTAAIIVLGGTFGAAFVSFPMKTIIGAAKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN------ETENHIDDPYNSTIFTSIP 114
+ ++ D K++ L+ K RN + ++ DP+ + +
Sbjct: 63 IKKVL------MPAQNDPEKVIKDLIGYAAKARRNGLISLEQEAQNVKDPFTKKGISLVV 116
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESL 172
++ +L E L EI++ YE+ A G
Sbjct: 117 DGIDPQKLR--------------------ETL---EIEVTYYEEHAKQSAEFFEAAGGYA 153
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P IGI+GA+LG+I MGNLS S K LG I V+ T+ G++ + +C P ++IK
Sbjct: 154 PTIGIIGAVLGLIHVMGNLSDSSK-LGAGIAVAFVATIYGLMTANIICLPFGTKIKHGIK 212
Query: 233 KQHRLYIIVKKALIAYMNGAIPQ 255
++ ++ + LIA NG P
Sbjct: 213 EELICKNMIIEGLIAIQNGENPH 235
>gi|330502788|ref|YP_004379657.1| flagellar motor protein [Pseudomonas mendocina NK-01]
gi|328917074|gb|AEB57905.1| flagellar motor protein [Pseudomonas mendocina NK-01]
Length = 246
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 30/257 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + + I+GG Y GGN L+ +IV G LG + P++V K + L
Sbjct: 5 SLIGVILAFVAILGGNYLEGGNAGALLNGPAALIVIGGTLGAAFLQAPVQVFKRAMGILR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENN 120
IF + D + +++ M K+G + DPY
Sbjct: 65 WIFFPPRI--DLIGGINRVVGWSMVARKEGLLGLESVADAEPDPYARKGLQ--------- 113
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIGIV 178
++V A I +++ E+D+ E ++ MG P IGI+
Sbjct: 114 ------------LLVDGAEPESIRSIL--EVDLYTQEARDIQAAKVFESMGGYAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I MGNL+ P +LG+ I V+ T+ G+ + L P +++KS L+Q R
Sbjct: 160 GAVMGLIHVMGNLAD-PSMLGSGIAVAFVATIYGVGFANLLLLPAGNKLKSIALRQSRYR 218
Query: 239 IIVKKALIAYMNGAIPQ 255
++ + +++ G P+
Sbjct: 219 EMLLEGILSIAEGENPR 235
>gi|153939764|ref|YP_001391526.1| flagellar motor protein MotA [Clostridium botulinum F str.
Langeland]
gi|170754260|ref|YP_001781839.1| flagellar motor protein MotA [Clostridium botulinum B1 str. Okra]
gi|152935660|gb|ABS41158.1| chemotaxis protein MotA [Clostridium botulinum F str. Langeland]
gi|169119472|gb|ACA43308.1| putative chemotaxis protein MotA [Clostridium botulinum B1 str.
Okra]
gi|295319552|gb|ADF99929.1| chemotaxis protein MotA [Clostridium botulinum F str. 230613]
Length = 261
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 27/274 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G+ I + +I G G N +L+ P +I+ + + + P KD + + +
Sbjct: 6 VLGVIIGLSSVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFP----KDEFLKIPK 61
Query: 64 IFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I G +K G+ ++ + L +K E +D N
Sbjct: 62 ILGVLFKEKGKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK-------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + M++ G SY I +++ EI + + G + P +G++GA+
Sbjct: 108 ---FMRKGLTMVVDGTESSY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ-HRLYII 240
+G+I A+GNL+ K LG I + TL GI Y +C+P S++K ++ + +YII
Sbjct: 164 VGLIGALGNLNDVEK-LGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYII 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + ++A G PQ E +L +ER IE
Sbjct: 223 V-EGVLAIQEGVNPQKIQEKLIGMLEPNERIKIE 255
>gi|226949497|ref|YP_002804588.1| chemotaxis protein MotA [Clostridium botulinum A2 str. Kyoto]
gi|226842638|gb|ACO85304.1| chemotaxis protein MotA [Clostridium botulinum A2 str. Kyoto]
Length = 261
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 27/274 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G+ I + +I G G N +L+ P +I+ + + + P KD + + +
Sbjct: 6 VLGVIIGLSAVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFP----KDEFLKIPK 61
Query: 64 IFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I G +K G+ ++ + L +K E +D N
Sbjct: 62 ILGVLFKEKGKGEQVSIVMEIVELSKTSRKDGLLALEKIVDSMSNK-------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + M++ G SY I +++ EI + + G + P +G++GA+
Sbjct: 108 ---FMKKGLTMVVDGTESSY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ-HRLYII 240
+G+I A+GNL+ K LG I + TL GI Y +C+P S++K ++ + +YII
Sbjct: 164 VGLIGALGNLNDVEK-LGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYII 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + ++A G PQ E +L +ER IE
Sbjct: 223 V-EGVLAIQEGVNPQKIQEKLIGMLEPNERIKIE 255
>gi|308173339|ref|YP_003920044.1| motility protein MotA [Bacillus amyloliquefaciens DSM 7]
gi|307606203|emb|CBI42574.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus amyloliquefaciens DSM 7]
gi|328553735|gb|AEB24227.1| flagellar motor protein MotA [Bacillus amyloliquefaciens TA208]
gi|328911415|gb|AEB63011.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus amyloliquefaciens LL3]
Length = 271
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ + + M + G + + I ++M EE++ + + G P +G++GA++G
Sbjct: 107 AFLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIG 165
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I A+ N++ + + LG AI + TLLGI Y L +P +++K ++ +L I+ +
Sbjct: 166 LIAALSNMNNT-EALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREIMIE 224
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+++ + G P+V + LP +ER +++ QE N KK
Sbjct: 225 GVLSVLEGQAPKVIEQKLLMYLPANERA--KVIEQEGEANNGEKK 267
>gi|149183514|ref|ZP_01861941.1| flagellar motor protein MotA [Bacillus sp. SG-1]
gi|148848786|gb|EDL63009.1| flagellar motor protein MotA [Bacillus sp. SG-1]
Length = 266
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + M + + G Y I ++++EEID + + G P +G++GA++G+
Sbjct: 108 FLKNGMGLAVDGQNADY-IRDVLNEEIDAMEERHQAGALIFTQAGTYAPTLGVLGAVVGL 166
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I A+G + K LG AI + TLLGI Y L +P +++K ++ ++ +++ +
Sbjct: 167 IAALGYMEDISK-LGEAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKIKVMMIEG 225
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+++ + G P+V + LP SER I+ +EV++ +
Sbjct: 226 VLSIIEGEAPRVIEQKLASYLPASERK--RIMEEEVVKDD 263
>gi|56963748|ref|YP_175479.1| flagellar motor protein MotA [Bacillus clausii KSM-K16]
gi|56909991|dbj|BAD64518.1| motility protein A [Bacillus clausii KSM-K16]
Length = 268
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F RM+I G + I + + E ID + S G P++G++GA+LG+
Sbjct: 108 FFQQATRMMIDGQDPDF-IRHTLHERIDAMQERHATGAAIFSQAGTYSPSLGVLGAVLGL 166
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR----LKQHRLYII 240
I A+GNL K LG +I + TLLGI Y L +P ++++ L QH +
Sbjct: 167 ISALGNLDDINK-LGESIAAAFVATLLGIFFGYVLWHPFANKLRRKSKIEVLNQH----M 221
Query: 241 VKKALIAYMNGAIPQVAIEY 260
+ + IA +NG+ P+ EY
Sbjct: 222 IIEGTIAIINGSSPRAVEEY 241
>gi|254491616|ref|ZP_05104795.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463094|gb|EEF79364.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 246
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+E F+ +++I G A I +M+ ++DI + ++ MG P IGI+G
Sbjct: 102 DETDLFVQKGLQLIADG-AEPELIREVMENDLDIQESDDIQAAKVFEAMGGYSPTIGIIG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++G+I MGNL+ P LG+ I V+ T+ G+ L+ L P+ +++KS ++ R+ +
Sbjct: 161 AVMGLIHVMGNLA-DPSSLGSGIAVAFVATIYGVALANLLFLPMGNKLKSVVAQRSRIQM 219
Query: 240 IVKKALIAYMNGAIPQ 255
++ + LI +G P+
Sbjct: 220 MMIEGLIGVADGDNPR 235
>gi|288573019|ref|ZP_06391376.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568760|gb|EFC90317.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 264
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 124/281 (44%), Gaps = 37/281 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG-V 59
++TIIGL ++++ ++GG A GG + ++I G +G +MANP+ IK G +
Sbjct: 3 LATIIGLSLSLILVVGGIVA-GGEAAAFVNLPSMLITIGGTMGAVIMANPMDRIKKLGKI 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN------ETENHIDDPYNSTIFTSI 113
+ + F D++ L+ ++ +K R + +DD
Sbjct: 62 TRIAFFSQ-------TPDLVSLVQTIVSFAEKARREGLLALEADASELDD---------- 104
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
F+ +++++ G ++ ++D EI ++ MGE P
Sbjct: 105 ----------EFLAKSIQLVVDGTDPEL-VKAILDTEISVLEERHASNKGMFDTMGELFP 153
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A G++G ++G+I + NL P LG + V+L T G ++ P ++++ + +
Sbjct: 154 AFGMLGTLIGLIAMLRNL-DDPGSLGPGMAVALITTFYGSFMANIFALPTSAKLAARSSE 212
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + ++ + ++A G P++ E + LP +R +E
Sbjct: 213 ETVVRELMVEGVLAIQAGENPRIVEEKLKVFLPPEQRKELE 253
>gi|313639079|gb|EFS04060.1| chemotaxis protein MotA [Listeria seeligeri FSL S4-171]
Length = 283
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 28/263 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVP-K 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTVL 117
L +I K G D DVL +++ + ++ + I+DP
Sbjct: 62 LFKILFTKERGPDK-VDVLIQYKEYADEIRRSGVLALEDSVDEIEDP------------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIG 176
F+ MR+++ G A + ++++EE+ + E+ Y I + G P +G
Sbjct: 108 -------FMKRGMRLVVDGQASPEFLRDVLEEEVSS-MEERHAAYAKIFASAGAYAPTLG 159
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 160 VLGAAMGLIHAMGEMS-NPDKLSEAIAAAFICTIFGIFTGYVLWTPFANKLKVKSQKEVH 218
Query: 237 LYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 219 LRYMMIEGVVALQERNAPRVVEE 241
>gi|292493579|ref|YP_003529018.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582174|gb|ADE16631.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 246
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 26/255 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I+G+ I II G Y GG ++ P ++IV G LG ++ PLK+ +
Sbjct: 5 SILGVIIGFGAIIVGQYLEGGELSAILNPVALLIVLGGTLGAVMLQTPLKLF----LRAF 60
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+I G+ + L ++ IL ++ K +R E + T+ E E+
Sbjct: 61 QISGWVFRPPSQRAEEL-IVNILEWS--KIARREG------------LLGLETIAET-EV 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F +++++ GN +I +++ +I++ L MG P IGI+GA++
Sbjct: 105 DRFSRRGLQLLVDGN-EPEDIRKILELDIELAERRDLLAAKVFESMGGYAPTIGILGAVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI--I 240
G+I+ MGNL+ P LG+ I V+ T+ GI L+ P +++K L + R YI +
Sbjct: 164 GLIQVMGNLA-DPSSLGSGIAVAFVATIYGIGLANLFFLPFANKLKV--LIRGRSYISEM 220
Query: 241 VKKALIAYMNGAIPQ 255
V + LI G P+
Sbjct: 221 VVEGLIGIAEGENPR 235
>gi|330721194|gb|EGG99304.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC2047]
Length = 248
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 22/253 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + ++GG + GG+ L +IV G LG ++ + + +G LL
Sbjct: 5 SVIGIILAFAAVLGGNFIEGGHFSALFNLPAAMIVIGGTLGAAILHSSWASVSRAGKILL 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F +L + Y K+L+ M K+G + ++E E
Sbjct: 65 WVFNPPSL--NVYQTSDKILHWSMTARKEG-----------------LLGLEAIVETEE- 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F +R+++ G I ++ ++ +I LK MG P IGI+GA++
Sbjct: 105 EYFAQKGLRLLVDGT-EPEAIRRALEVDLYLIESRDLKAARFFECMGGYAPTIGIIGAVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NL+ P LG+ I + T+ G+ L+ L P+ +++K +Q++ ++
Sbjct: 164 GLIHVMRNLA-DPSELGSGIATAFVATIYGVGLANLLFLPIANKLKGVVQQQYQYNEMIV 222
Query: 243 KALIAYMNGAIPQ 255
+ +IA G P+
Sbjct: 223 EGVIAIAEGENPR 235
>gi|154685778|ref|YP_001420939.1| flagellar motor protein MotA [Bacillus amyloliquefaciens FZB42]
gi|154351629|gb|ABS73708.1| MotA [Bacillus amyloliquefaciens FZB42]
Length = 271
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ + + M + G + + I ++M EE++ + + G P +G++GA++G
Sbjct: 107 AFLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIG 165
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I A+ N++ + + LG AI + TLLGI Y L +P +++K ++ +L I+ +
Sbjct: 166 LIAALSNMNNT-EALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREIMIE 224
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+++ + G P+V + LP +ER ++ QE N KK
Sbjct: 225 GVLSVLEGQAPKVIEQKLLMYLPANERA--KVAEQEGEANNGEKK 267
>gi|315301918|ref|ZP_07872929.1| chemotaxis protein MotA [Listeria ivanovii FSL F6-596]
gi|313629714|gb|EFR97836.1| chemotaxis protein MotA [Listeria ivanovii FSL F6-596]
Length = 283
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 22/260 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVP-K 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +I K G D DVL + Y + D+ S + +V E
Sbjct: 62 LFKILFTKERGPDK-VDVL-----IQYK----------EYADEIRRSGVLALEDSVDEME 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIVG 179
+ F+ MR+++ G + + ++++EE+ + E+ Y I + G P +G++G
Sbjct: 106 D--PFMKRGMRLVVDGQSSPEFLRDVLEEEVSS-MEERHAAYAKIFASAGAYAPTLGVLG 162
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A +G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L
Sbjct: 163 AAMGLIHAMGEMS-NPDKLSEAIAAAFICTIFGIFTGYVLWTPFANKLKVKSQKEVHLRY 221
Query: 240 IVKKALIAYMNGAIPQVAIE 259
++ + ++A P+V E
Sbjct: 222 MMIEGVVALQERNAPRVVEE 241
>gi|121533428|ref|ZP_01665256.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
gi|121307987|gb|EAX48901.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
Length = 261
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 29/282 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST++G+ + ++ I G G N IL+ I+I+ L + A PL IK V
Sbjct: 4 STVLGMLVGVVAISVGMVLKGANLSILLNYAAIMIIFVGTLASLLNAFPLAQIKKLPVLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETE---NHIDDPYNSTIFTSIPTVLE 118
+F + L T ++LKL + ++ E I DP+ L
Sbjct: 64 KLLFKEQQLMPRT--ELLKLFVEMAQTARREGLLALEGRLEEISDPF-----------LR 110
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N M++V + I ++++ EI+++ K + G P +G++
Sbjct: 111 NG----------LMMVVDGMDTELIRDVLEAEIELMQERHSKGALMFTQAGTYAPTLGVL 160
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I A+GNL K LG +I + TL GI Y + +P +++K + L
Sbjct: 161 GAVVGLIAALGNLDDIEK-LGHSIAAAFVATLFGIFSGYVMWHPFANKLKFLSKNEVELK 219
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKV-LPLSERPSIEIVAQE 279
++ + +++ G P A+E V +P SER S++ +E
Sbjct: 220 RMMIEGILSLQAGESPN-ALEAKLVVFIPQSERASLKEKREE 260
>gi|146307822|ref|YP_001188287.1| flagellar motor protein [Pseudomonas mendocina ymp]
gi|145576023|gb|ABP85555.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
Length = 246
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 30/257 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + + I+GG Y GG+ L+ +IV G LG + P+ V K + L
Sbjct: 5 SLIGVILAFVAILGGNYLEGGHAGALLNGPAALIVIGGTLGAAFLQAPVNVFKRAMSILR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENN 120
IF + D + +++ M K+G + DPY
Sbjct: 65 WIFFPPRI--DLIGGINRVVGWSMVARKEGLLGLEAVADAEPDPYARKGLQ--------- 113
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIGIV 178
++V A I +++ E+D+ E ++ + MG P IGI+
Sbjct: 114 ------------LLVDGAEPESIRSIL--EVDLYTQEARDIQAAKVLESMGGYAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I MGNL+ P +LG+ I V+ T+ G+ + L P +++KS L+Q R
Sbjct: 160 GAVMGLIHVMGNLAD-PSMLGSGIAVAFVATIYGVGFANLLLLPAGNKLKSIALRQSRYR 218
Query: 239 IIVKKALIAYMNGAIPQ 255
++ + +++ G P+
Sbjct: 219 EMLLEGILSIAEGENPR 235
>gi|218899668|ref|YP_002448079.1| chemotaxis protein MotA [Bacillus cereus G9842]
gi|218543144|gb|ACK95538.1| chemotaxis protein MotA [Bacillus cereus G9842]
Length = 264
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 28/283 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+TIIGL + L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 3 FATIIGLILGFLAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKL 62
Query: 61 LLEIFGYKALGQD-TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+FG +D +Y +L+L +K E +D +
Sbjct: 63 FKVLFGSNK--KDLSYEQLLELFVHWTSESRKYGILSLEQQLDKIQDE------------ 108
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ M+ +I G + ++E +++ E++ I K S G P +G++G
Sbjct: 109 -----FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLG 162
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHR 236
A++G++ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ R
Sbjct: 163 AVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKR 221
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L I L+ G P + L +ER +E A++
Sbjct: 222 LII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|326942296|gb|AEA18192.1| flagellar motor protein MotA [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 264
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 28/283 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+TIIGL + L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 3 FATIIGLVLGFLAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKL 62
Query: 61 LLEIFGYKALGQD-TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+FG +D +Y +L+L +K E +D +
Sbjct: 63 FKVLFGSNK--KDLSYEQLLELFVHWTSESRKYGILSLEQQLDKIQDE------------ 108
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ M+ +I G + ++E +++ E++ I K S G P +G++G
Sbjct: 109 -----FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLG 162
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHR 236
A++G++ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ R
Sbjct: 163 AVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKR 221
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L I L+ G P + L +ER +E A++
Sbjct: 222 LII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|75761763|ref|ZP_00741701.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228903030|ref|ZP_04067169.1| hypothetical protein bthur0014_41970 [Bacillus thuringiensis IBL
4222]
gi|228910336|ref|ZP_04074152.1| hypothetical protein bthur0013_44830 [Bacillus thuringiensis IBL
200]
gi|228967606|ref|ZP_04128629.1| hypothetical protein bthur0004_44000 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74490748|gb|EAO54026.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228792097|gb|EEM39676.1| hypothetical protein bthur0004_44000 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228849288|gb|EEM94126.1| hypothetical protein bthur0013_44830 [Bacillus thuringiensis IBL
200]
gi|228856623|gb|EEN01144.1| hypothetical protein bthur0014_41970 [Bacillus thuringiensis IBL
4222]
Length = 266
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 28/283 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+TIIGL + L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 5 FATIIGLILGFLAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKL 64
Query: 61 LLEIFGYKALGQD-TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+FG +D +Y +L+L +K E +D +
Sbjct: 65 FKVLFGSNK--KDLSYEQLLELFVHWTSESRKYGILSLEQQLDKIQDE------------ 110
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ M+ +I G + ++E +++ E++ I K S G P +G++G
Sbjct: 111 -----FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLG 164
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHR 236
A++G++ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ R
Sbjct: 165 AVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKR 223
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L I L+ G P + L +ER +E A++
Sbjct: 224 LII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|228941690|ref|ZP_04104237.1| hypothetical protein bthur0008_43260 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974616|ref|ZP_04135182.1| hypothetical protein bthur0003_43690 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981211|ref|ZP_04141511.1| hypothetical protein bthur0002_43720 [Bacillus thuringiensis Bt407]
gi|228778411|gb|EEM26678.1| hypothetical protein bthur0002_43720 [Bacillus thuringiensis Bt407]
gi|228785019|gb|EEM33032.1| hypothetical protein bthur0003_43690 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817902|gb|EEM63980.1| hypothetical protein bthur0008_43260 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 266
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 28/283 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+TIIGL + L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 5 FATIIGLVLGFLAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKL 64
Query: 61 LLEIFGYKALGQD-TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+FG +D +Y +L+L +K E +D +
Sbjct: 65 FKVLFGSNK--KDLSYEQLLELFVHWTSESRKYGILSLEQQLDKIQDE------------ 110
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ M+ +I G + ++E +++ E++ I K S G P +G++G
Sbjct: 111 -----FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLG 164
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHR 236
A++G++ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ R
Sbjct: 165 AVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKR 223
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L I L+ G P + L +ER +E A++
Sbjct: 224 LII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|289433963|ref|YP_003463835.1| chemotaxis protein MotA [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170207|emb|CBH26747.1| chemotaxis protein MotA [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313634397|gb|EFS00986.1| chemotaxis protein MotA [Listeria seeligeri FSL N1-067]
Length = 283
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 28/263 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVP-K 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTVL 117
L +I K G D DVL +++ + ++ + I+DP
Sbjct: 62 LFKILFTKERGPDK-VDVLIQYKEYADEIRRSGVLALEDSVDEIEDP------------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIG 176
F+ MR+++ G + + ++++EE+ + E+ Y I + G P +G
Sbjct: 108 -------FMKRGMRLVVDGQSSPEFLRDVLEEEVSS-MEERHAAYAKIFASAGAYAPTLG 159
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 160 VLGAAMGLIHAMGEMS-NPDKLSEAIAAAFICTIFGIFTGYVLWTPFANKLKVKSQKEVH 218
Query: 237 LYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 219 LRYMMIEGVVALQERNAPRVVEE 241
>gi|170760022|ref|YP_001787604.1| flagellar motor protein MotA [Clostridium botulinum A3 str. Loch
Maree]
gi|169407011|gb|ACA55422.1| putative chemotaxis protein MotA [Clostridium botulinum A3 str.
Loch Maree]
Length = 261
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 27/274 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G+ I + +I G G N +L+ P +I+ + + + P KD + + +
Sbjct: 6 VLGVIIGLSSVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFP----KDEFLKIPK 61
Query: 64 IFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I G +K G+ ++ + L +K E +D N
Sbjct: 62 ILGVLFKEKGKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK-------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + M++ G Y I +++ EI + + G + P +G++GA+
Sbjct: 108 ---FMKKGLTMVVDGTEPGY-IREVLEIEIQTVEERHCLGASIFTTAGGAAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ-HRLYII 240
+G+I A+GNL+ K LG I + TL GI Y +C+P S++K ++ + +YII
Sbjct: 164 VGLIGALGNLNDVEK-LGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYII 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + ++A G PQ E +L +ER IE
Sbjct: 223 V-EGVLAIQEGVNPQKIQEKLIGMLEPNERIKIE 255
>gi|148380180|ref|YP_001254721.1| chemotaxis protein MotA [Clostridium botulinum A str. ATCC 3502]
gi|153931827|ref|YP_001384479.1| flagellar motor protein MotA [Clostridium botulinum A str. ATCC
19397]
gi|153936340|ref|YP_001387995.1| flagellar motor protein MotA [Clostridium botulinum A str. Hall]
gi|148289664|emb|CAL83768.1| putative chemotaxis MotA protein [Clostridium botulinum A str. ATCC
3502]
gi|152927871|gb|ABS33371.1| putative chemotaxis protein MotA [Clostridium botulinum A str. ATCC
19397]
gi|152932254|gb|ABS37753.1| putative chemotaxis protein MotA [Clostridium botulinum A str.
Hall]
Length = 261
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 27/274 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G+ I + +I G G N +L+ P +I+ + + + P KD + + +
Sbjct: 6 VLGVIIGLSAVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFP----KDEFLKIPK 61
Query: 64 IFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I G +K G+ ++ + L +K E +D N
Sbjct: 62 ILGVLFKEKGKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK-------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + M++ G Y I +++ EI + + G + P +G++GA+
Sbjct: 108 ---FMKKGLTMVVDGTEPGY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ-HRLYII 240
+G+I A+GNL+ K LG I + TL GI Y +C+P S++K ++ + +YII
Sbjct: 164 VGLIGALGNLNDVEK-LGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYII 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + ++A G PQ E +L +ER IE
Sbjct: 223 V-EGVLAIQEGVNPQKIQEKLIGMLEPNERIKIE 255
>gi|237795651|ref|YP_002863203.1| chemotaxis protein MotA [Clostridium botulinum Ba4 str. 657]
gi|229261365|gb|ACQ52398.1| putative chemotaxis protein MotA [Clostridium botulinum Ba4 str.
657]
Length = 261
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 27/274 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G+ I + +I G G N +L+ P +I+ + + + P KD + + +
Sbjct: 6 VLGVIIGLSAVIVGMMVKGANVAVLLNPAAAIIILVGTIAAVMNSFP----KDEFLKIPK 61
Query: 64 IFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I G +K G+ ++ + L +K E +D N
Sbjct: 62 ILGVLFKEKGKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK-------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + M++ G Y I +++ EI + + G + P +G++GA+
Sbjct: 108 ---FMKKGLTMVVDGTEPGY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ-HRLYII 240
+G+I A+GNL+ K LG I + TL GI Y +C+P S++K ++ + +YII
Sbjct: 164 VGLIGALGNLNDVEK-LGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYII 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + ++A G PQ E +L +ER IE
Sbjct: 223 V-EGVLAIQEGVNPQKIQEKLIGMLEPNERIKIE 255
>gi|312879596|ref|ZP_07739396.1| MotA/TolQ/ExbB proton channel [Aminomonas paucivorans DSM 12260]
gi|310782887|gb|EFQ23285.1| MotA/TolQ/ExbB proton channel [Aminomonas paucivorans DSM 12260]
Length = 264
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IG + + +IGG A GG P + I+I G LG +MANPL+ K +
Sbjct: 3 LGTVIGFLLANILVIGGILA-GGEPMAFVDIPSILITGGGTLGAAIMANPLERTK----A 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN------ETENHIDDPYNSTIFTSIP 114
L +I KA D D+ L+ L+ +K R E +DD
Sbjct: 58 LPKIV-RKAFFADP-IDLTGLIQTLVSFAEKARREGLLALEEDAGQLDD----------- 104
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
F+ +++++ G +++++D EI ++ M E PA
Sbjct: 105 ---------EFMRKSIQLVVDGTDPEL-VKSILDTEIGLLEERHAAAKSMFDIMAELAPA 154
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G++G ++G+I +GNL P LG + +L T G ++ LC P++ ++ ++
Sbjct: 155 FGMLGTLIGLILMLGNLD-DPDALGPGMATALITTFYGSYIANVLCIPISKKLAYRSSQE 213
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ + +++ G P++ E + L + R +E QE
Sbjct: 214 ILSRELMVEGILSIQAGENPRIVEEKLKVFLSPTMRAKMEEKKQEA 259
>gi|187779119|ref|ZP_02995592.1| hypothetical protein CLOSPO_02714 [Clostridium sporogenes ATCC
15579]
gi|187772744|gb|EDU36546.1| hypothetical protein CLOSPO_02714 [Clostridium sporogenes ATCC
15579]
Length = 261
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 27/274 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G+ I + +I G G N +L+ P +I+ + + + P KD + + +
Sbjct: 6 VLGVIIGLSAVIVGMIVKGANIAVLLNPAAAIIILVGTMAAVMNSFP----KDEFLKIPK 61
Query: 64 IFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I G +K G+ ++ + L +K E +D N + + V++ E
Sbjct: 62 ILGVLFKEKGKGEQASIVNEIVELSKTSRKDGLLALEKIVDSMSNKFMKKGLTMVVDGTE 121
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
Y+R ++ +S E + + I + G + P +G++GA+
Sbjct: 122 -----PGYIREVLEIEIQSVEERHRLGASI-------------FTTAGGAAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ-HRLYII 240
+G+I A+GNL+ K LG I + TL GI Y +C+P S++K ++ + +YII
Sbjct: 164 VGLIGALGNLNDVEK-LGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYII 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + ++A G PQ E +L +ER IE
Sbjct: 223 V-EGVLAIQEGVNPQKIQEKLIGMLEPNERIKIE 255
>gi|90022861|ref|YP_528688.1| flagellar motor protein PomA [Saccharophagus degradans 2-40]
gi|89952461|gb|ABD82476.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 253
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
+ M + PA+G++G ++G++ + N+ PK +G A+ V+L TL G +++ +LC P+
Sbjct: 144 ASMADMAPAMGMIGTLIGLVAMLANMDD-PKAIGPAMAVALLTTLYGAVIANALCGPIAD 202
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++K + + + +V ALIA NG P+V R LP +R
Sbjct: 203 KLKQRAIDEAMIKSLVIDALIAIQNGQNPRVIDSLLRNYLPEGKR 247
>gi|167463461|ref|ZP_02328550.1| MotA [Paenibacillus larvae subsp. larvae BRL-230010]
Length = 265
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 32/261 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL I + +IGGF GG+ L+ P ++IV G +G V++ P V+K
Sbjct: 3 LATLLGLIIGLGALIGGFLWDGGHLSSLVIPSAMLIVFGGTIGAVVVSFPGSVLKKI--- 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE-- 118
KALG K + N E IDD + VL
Sbjct: 60 ------PKALG---------------IAFKPANTNPIET-IDDIVDMATIARREGVLALE 97
Query: 119 ---NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
F+ D + M++ G +++ E+D I + G P +
Sbjct: 98 QRAQEHPNEFLRDGLMMVVDGTDPEL-TRQILELEMDSIEQQNEGMTKMFESAGGYSPTM 156
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GI+G ++G+I +GNL + P LG AI V+ T TL G++ + + P+ ++I+ +Q
Sbjct: 157 GIIGTVMGLIHVLGNL-EDPSALGPAIAVAFTATLYGVMAANVIYLPIGNKIRIRSKEQI 215
Query: 236 RLYIIVKKALIAYMNGAIPQV 256
++ + ++A G PQ+
Sbjct: 216 SQMELMLEGILALQAGENPQL 236
>gi|328467254|gb|EGF38334.1| flagellar motor protein MotA [Listeria monocytogenes 1816]
Length = 283
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 30/264 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L+ ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLLSAEALIVIILGTITAVMMAHPWSDVKV---- 58
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTV 116
V KL IL K + E + + D+ S + +V
Sbjct: 59 -----------------VPKLFKILFTKEKMPDKVEVLVQYKEYADEIRRSGVLALEDSV 101
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAI 175
E + F+ MR+++ G + + ++++EE+ + E+ Y I + G P +
Sbjct: 102 DEIED--PFMKRGMRLVVDGQSSPEFLRDVLEEEV-ASMEERHAAYAKIFASAGAYAPTL 158
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 159 GVLGAAMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEV 217
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 218 HLRYMMIEGVVALQERNAPRVVEE 241
>gi|229072016|ref|ZP_04205226.1| hypothetical protein bcere0025_41830 [Bacillus cereus F65185]
gi|228711175|gb|EEL63140.1| hypothetical protein bcere0025_41830 [Bacillus cereus F65185]
Length = 266
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 28/283 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+TIIGL + + +I G G + L+ P +I+ +A P+ +K
Sbjct: 5 FATIIGLILGFVAVIVGMVVKGADITALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKL 64
Query: 61 LLEIFGYKALGQD-TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+FG +D +Y +L+L +K E +D +
Sbjct: 65 FKVLFGSNK--KDLSYEQLLELFVHWTSESRKYGILSLEQQLDKIQDE------------ 110
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ M+ +I G + ++E +++ E++ I K S G P +G++G
Sbjct: 111 -----FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLG 164
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHR 236
A++G++ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ R
Sbjct: 165 AVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKR 223
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L I L+ G P + L +ER +E A++
Sbjct: 224 LII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|168179912|ref|ZP_02614576.1| chemotaxis protein MotA [Clostridium botulinum NCTC 2916]
gi|182669295|gb|EDT81271.1| chemotaxis protein MotA [Clostridium botulinum NCTC 2916]
gi|322806478|emb|CBZ04047.1| flagellar motor rotation protein MotA [Clostridium botulinum H04402
065]
Length = 261
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 27/274 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G+ I + +I G G N +L+ P +I+ + + + P KD + + +
Sbjct: 6 VLGVIIGLSAVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFP----KDEFLKIPK 61
Query: 64 IFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I G +K G+ ++ + L +K E +D N
Sbjct: 62 ILGVLFKEKGKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK-------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + M++ G Y I +++ EI + + G + P +G++GA+
Sbjct: 108 ---FMKKGLTMVVDGTEPGY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ-HRLYII 240
+G+I A+GNL+ K LG I + TL GI Y +C+P S++K ++ +YII
Sbjct: 164 VGLIGALGNLNDVEK-LGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEISSMYII 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + ++A G PQ E +L +ER IE
Sbjct: 223 V-EGVLAIQEGVNPQKIQEKLIGMLEPNERIKIE 255
>gi|254824035|ref|ZP_05229036.1| flagellar motor protein MotA [Listeria monocytogenes FSL J1-194]
gi|254932035|ref|ZP_05265394.1| flagellar motor protein MotA [Listeria monocytogenes HPB2262]
gi|293583588|gb|EFF95620.1| flagellar motor protein MotA [Listeria monocytogenes HPB2262]
gi|293593264|gb|EFG01025.1| flagellar motor protein MotA [Listeria monocytogenes FSL J1-194]
gi|307570224|emb|CAR83403.1| chemotaxis protein [Listeria monocytogenes L99]
gi|328475648|gb|EGF46397.1| flagellar motor protein MotA [Listeria monocytogenes 220]
gi|332311110|gb|EGJ24205.1| Chemotaxis protein MotA [Listeria monocytogenes str. Scott A]
Length = 283
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 30/264 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKV---- 58
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTV 116
V KL IL K + E + + D+ S + +V
Sbjct: 59 -----------------VPKLFKILFTKEKMPDKVEVLVQYKEYADEIRRSGVLALEDSV 101
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAI 175
E + F+ MR+++ G + + ++++EE+ + E+ Y I + G P +
Sbjct: 102 DEIED--PFMKRGMRLVVDGQSSPEFLRDVLEEEV-ASMEERHAAYAKIFASAGAYAPTL 158
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 159 GVLGAAMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEV 217
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 218 HLRYMMIEGVVALQERNAPRVVEE 241
>gi|222053742|ref|YP_002536104.1| MotA/TolQ/ExbB proton channel [Geobacter sp. FRC-32]
gi|221563031|gb|ACM19003.1| MotA/TolQ/ExbB proton channel [Geobacter sp. FRC-32]
Length = 256
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGG----FVMANPLKVIKD 56
+++IIGL + +IGG GG+ +IQP +IV G +G F +AN L +KD
Sbjct: 3 IASIIGLILGFGAVIGGQILEGGHVSAIIQPTAALIVLGGTIGATFVSFPLANILNALKD 62
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN------ETENHIDDPYNSTIF 110
+ L +D V+K I+ Y K RN + + D +
Sbjct: 63 ARKVLFP-------PKDDPEAVIK--NIINY-AAKARRNGLISLEQEAQTVKDSFTKKGI 112
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGE 170
+ ++V ++ M+ E++ G
Sbjct: 113 S---------------------LVVDGIDPQKLRETMEIELNSFEEHAKASAEVFEAAGG 151
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
P IGI+GA+LG+I M NLS S K LG I V+ T+ G++ + +C P+++++K
Sbjct: 152 FAPTIGIIGAVLGLIHVMNNLSDSSK-LGAGIAVAFVATIYGLMTANIICIPISTKLK-L 209
Query: 231 RLKQHRLYI-IVKKALIAYMNGAIPQVAIEYGRKVLP 266
RLK+ L +V + LIA NG P + R LP
Sbjct: 210 RLKEAILQKEMVIEGLIAIQNGENPHFIEQKLRAYLP 246
>gi|146306331|ref|YP_001186796.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145574532|gb|ABP84064.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
Length = 255
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Query: 117 LENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE + ++ F+ ++++I G + I +++E + L + S MG+ PA+
Sbjct: 95 LEGRDFSSPFLSAGVQLMIDGQGQDT-IRAFLEKERVLTLERNREGAKVFSAMGDVGPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ + N+ + PK +G A+ V+L TL G +++ +C PL ++ ++
Sbjct: 154 GMIGTLVGLVQMLSNM-EDPKSIGPAMAVALLTTLYGAMMATMICLPLADKLSLRSSEEA 212
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
R+ + AL+A +G P++ + + LP S+R
Sbjct: 213 RMQALWIDALLAIQDGVNPRIIEQMLKSYLPPSKR 247
>gi|313610150|gb|EFR85460.1| chemotaxis protein MotA [Listeria monocytogenes FSL F2-208]
Length = 283
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 30/264 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKV---- 58
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTV 116
V KL IL K + E + + D+ S + +V
Sbjct: 59 -----------------VPKLFKILFTKEKMPDKVEXXXXYKEYADEIRRSGVLALEDSV 101
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAI 175
E + F+ MR+++ G + + ++++EE+ + E+ Y I + G P +
Sbjct: 102 DEIED--PFMKRGMRLVVDGQSSPEFLRDVLEEEV-ASMEERHAAYAKIFASAGAYAPTL 158
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 159 GVLGAAMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEV 217
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 218 HLRYMMIEGVVALQERNAPRVVEE 241
>gi|148359325|ref|YP_001250532.1| flagellar motor protein MotA [Legionella pneumophila str. Corby]
gi|296107372|ref|YP_003619072.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
gi|148281098|gb|ABQ55186.1| flagellar motor protein MotA [Legionella pneumophila str. Corby]
gi|295649273|gb|ADG25120.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
Length = 257
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 26/256 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+IGL L II G GG+ L+ ++IV G LG ++ PL K + L
Sbjct: 5 TLIGLLTGFLAIIVGQIFEGGDLNSLLNLPALLIVMGGTLGAVMVQTPLTTFKRAFRILP 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + + L L ++ E+ +D N I+ +
Sbjct: 65 WVVKPP---HHNFEECRTTLIELSRKARQLGLLSLEDRLDVETNPLIYKGLE-------- 113
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++V + +++ EID ++ L+ H MG P IGI+GA+L
Sbjct: 114 ----------LLVTGVDKLTLRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTIGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI--I 240
G+I+ M NL+ P LG I V+ T+ G+ + P+ +++KS HR++ +
Sbjct: 164 GLIQVMRNLA-DPSQLGLGIAVAFVATIYGVGFANLFFLPVANKLKSC--ISHRVHFDEM 220
Query: 241 VKKALIAYMNGAIPQV 256
V + L+A +G P +
Sbjct: 221 VVEGLVAMASGESPNM 236
>gi|311067882|ref|YP_003972805.1| flagellar motor protein MotA [Bacillus atrophaeus 1942]
gi|310868399|gb|ADP31874.1| flagellar motor protein MotA [Bacillus atrophaeus 1942]
Length = 271
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ + + M + G + + I ++M EE++ + + G P +G++GA++G
Sbjct: 107 AFLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEERHQTGASIFTQAGTYAPTLGVLGAVVG 165
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I A+ ++ + + LG AI + TLLGI Y L +P +++K ++ +L I+ +
Sbjct: 166 LIAALSHMDNTDE-LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREIMIE 224
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+++ + G P+V + LP +R + AQE N KK
Sbjct: 225 GVLSVLEGQAPKVIEQKLLMYLPAKDRA--KFAAQEGEAENGEKK 267
>gi|49089296|gb|AAT51667.1| PA1460 [synthetic construct]
Length = 247
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 30/257 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++G+ + + I+GG + GG+ L+ +IV G L ++ P+ V+K G+ +L
Sbjct: 5 SLVGIILAFVAIVGGNFLEGGHAGALLNGPAALIVIGGTLAAALLQTPVNVLK-RGLGML 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +D + +++ M K+G + DPY
Sbjct: 64 GWVFFPPR-EDLSGGIDRIVSWSMTARKEGLLGLESIADAEPDPYARKGLQ--------- 113
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIGIV 178
++V A I +++ E+D++ E L+ MG P IGI+
Sbjct: 114 ------------LLVDGAEPEVIRSIL--EVDLLTQESRDLQAAKVFESMGGYAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I MGNL+ +P LG+ I V+ T+ G+ + L P+ +++K+ L+Q R
Sbjct: 160 GAVMGLIHVMGNLA-NPAQLGSGIAVAFVATIYGVGFANLLLLPIGNKLKTLVLRQSRYR 218
Query: 239 IIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 219 EMLLEGLLSIAEGENPR 235
>gi|320354971|ref|YP_004196310.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
gi|320123473|gb|ADW19019.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
Length = 261
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 119/285 (41%), Gaps = 35/285 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + + ++GG G + L+QP +IV G G ++ PL + +
Sbjct: 3 IATLIGLVLGLGAVVGGAALEGLHLNALVQPTAALIVLGGTFGAAFVSFPLPTVLRAFKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ D D+ N + ++H D I S+ +
Sbjct: 63 VKKLLAGSPKNDDIIADICAFAAKARKNGIIALEQDAKSHKDRFMKKAISLSVDGI---- 118
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAIGIV 178
EI L+ EID+ E+ A G P IGI+
Sbjct: 119 ------------------DPKEIRELL--EIDMSATEEQAKMSAEFFEAAGGYAPTIGII 158
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH--R 236
GA+LG+I M NLS + K LG I V+ T+ G+I + LC P ++IK R+K R
Sbjct: 159 GAVLGLIHVMSNLSDTSK-LGAGIAVAFVATIYGLITANILCLPAATKIK-LRIKDEMVR 216
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVL--PLSERPSIEIVAQE 279
+I+ ++A NG P+ E R L ++PS VA+E
Sbjct: 217 KEMII-AGVVAIQNGENPRFIEERLRSYLGGEGDDKPS--AVAEE 258
>gi|323528402|ref|YP_004230554.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323385404|gb|ADX57494.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 254
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 25/240 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GGN L Q VIV G LG ++ N D GV LL
Sbjct: 5 TVFGVVFGVAAIVAGFSLEGGNFTSLFQLEAFVIVLGGTLGAVMIQNTWARFFD-GVKLL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
KA D + L +L L+ G + + + +F SI E N +
Sbjct: 64 RFAFVKARQVDR--ESLSVL------LEWGDQAKLNGLL-------VFESI----EANGI 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
+ F + ++ G + + +E+ + E+D L G P GI+GA+L
Sbjct: 105 SPFAKRGLELLANGVSTAV-LEDALQREVDAYERNYLAAARIWQQAGGYAPTFGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRLYI 239
G+I+ G++ + P LG I V+ TL G+ L+ + PL +I++ + L+ RLY+
Sbjct: 164 GLIQVTGHMLE-PSQLGQGIAVAFVATLYGLALANLVFLPLFGKIRAQVDSELRFRRLYL 222
>gi|148266089|ref|YP_001232795.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146399589|gb|ABQ28222.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
Length = 256
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 34/272 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + +IGG GG+ ++QP +IV G G ++ PLK I
Sbjct: 3 IATIIGLVLGFGAVIGGQVLEGGHVSAILQPTAALIVLGGTFGATFVSFPLKNI------ 56
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LK +++ K+ +N I+ Y + + LE
Sbjct: 57 ---------------LQALKDSRKVLFPPKEDPEGVIKNIIN--YAAKARRNGLISLEQE 99
Query: 121 ELT---TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAI 175
T +F + +++ G E + EI++ +E+ A G P I
Sbjct: 100 AQTVKDSFTKKGISLVVDGIDPQKLRETM---EIELASFEEHAKASAEVFEAAGGFAPTI 156
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GI+GA+LG+I M NLS S K LG I V+ T+ G++ + +C P+++++K RLK+
Sbjct: 157 GIIGAVLGLIHVMNNLSDSSK-LGAGIAVAFVATIYGLMTANIICIPISTKLK-LRLKEA 214
Query: 236 RLYI-IVKKALIAYMNGAIPQVAIEYGRKVLP 266
L +V + LIA NG P + R +P
Sbjct: 215 ILQKEMVIEGLIAIQNGENPHFIEQKLRAYMP 246
>gi|54294668|ref|YP_127083.1| flagellar motor protein [Legionella pneumophila str. Lens]
gi|53754500|emb|CAH15984.1| flagellar motor protein MotA [Legionella pneumophila str. Lens]
Length = 257
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 26/256 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+IGL L II G GG+ L+ ++IV G LG ++ PL K + L
Sbjct: 5 TLIGLLTGFLAIIVGQMFEGGDLNSLLNFPALLIVMGGTLGAVMVQTPLTTFKRAFRILP 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + + L L ++ E+ +D N I+ +
Sbjct: 65 WVVKPP---HHNFEECRTTLIELSRKARQLGLLSLEDRLDVETNPLIYKGLE-------- 113
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++V + +++ EID ++ L+ H MG P +GI+GA+L
Sbjct: 114 ----------LLVTGVDKLTLRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTVGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI--I 240
G+I+ M NL+ P LG I V+ T+ G+ + P+ +++KS HR++ +
Sbjct: 164 GLIQVMRNLA-DPSQLGLGIAVAFVATIYGVGFANLFFLPVANKLKSC--ISHRVHFDEM 220
Query: 241 VKKALIAYMNGAIPQV 256
V + L+A +G P +
Sbjct: 221 VVEGLVAMASGESPNM 236
>gi|16799768|ref|NP_470036.1| flagellar motor protein MotA [Listeria innocua Clip11262]
gi|16413145|emb|CAC95925.1| lin0693 [Listeria innocua Clip11262]
gi|313620084|gb|EFR91592.1| chemotaxis protein MotA [Listeria innocua FSL S4-378]
gi|313624927|gb|EFR94835.1| chemotaxis protein MotA [Listeria innocua FSL J1-023]
Length = 283
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 30/264 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKV---- 58
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTV 116
V KL IL K + E + + D+ S + +V
Sbjct: 59 -----------------VPKLFKILFTKEKMPDKVEILVQYKEYADEIRRSGVLALEDSV 101
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAI 175
E + F+ MR+++ G + + ++++EE+ + E+ Y I + G P +
Sbjct: 102 DEIED--PFMKRGMRLVVDGQSSPEFLRDVLEEEV-ASMEERHAAYAKIFASAGAYAPTL 158
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 159 GVLGAAMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEV 217
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 218 HLRYMMIEGVVALQERNAPRVVEE 241
>gi|192359153|ref|YP_001982601.1| flagellar motor protein [Cellvibrio japonicus Ueda107]
gi|190685318|gb|ACE82996.1| transporter, MotA/TolQ/ExbB proton channel family [Cellvibrio
japonicus Ueda107]
Length = 248
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 32/258 (12%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+IIG+ I IIGG GG L+ IV G LG ++ P K+S L
Sbjct: 5 SIIGVIIGFAAIIGGNLMEGGGLSTLVNGPAAFIVIGGTLGAAILQTP----KNSLRRAL 60
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+I G+ V K Y+ K+G N + + + + +V E E
Sbjct: 61 KILGW----------VFKPPYV---PFKQGVNNISRWAAAARKDGLL--GLESVSER-EK 104
Query: 123 TTFICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F +++++ GN R E + ++DE+ D+ + +K Y + MG P IGI
Sbjct: 105 DKFAKKGLQLLVDGNEPEVIRRVLETDMIVDEQRDL---DAIKFYES---MGGYAPTIGI 158
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA++G+I M NL+ P LG I V+ T+ G+ L+ L P+ ++++ + +
Sbjct: 159 IGAVMGLIHVMNNLAD-PSTLGPGIAVAFVATIYGVALANLLLIPIANKLRMCVNENSQY 217
Query: 238 YIIVKKALIAYMNGAIPQ 255
++ + +IA +G P+
Sbjct: 218 RELIIEGIIAIADGENPR 235
>gi|313497821|gb|ADR59187.1| MotC [Pseudomonas putida BIRD-1]
Length = 246
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K +
Sbjct: 5 SLIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGTLAAALLQSPLSSFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
L++L +++ R + ID N ++ +L +
Sbjct: 60 ----------------LQILRWILFP----PRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D++ E ++ MG P IG
Sbjct: 100 ADSEPDPYARKGLQLLVDGAEPEAIRSIL--EVDLLTQEGRDIQAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG I V+ T+ G+ + + P+ S++K+ ++Q R
Sbjct: 158 IIGAVMGLIHVMGNLA-DPSQLGNGIAVAFVATIYGVASANLVLLPVASKLKAIVMRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|15596657|ref|NP_250151.1| flagellar motor protein [Pseudomonas aeruginosa PAO1]
gi|116049405|ref|YP_791792.1| flagellar motor protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|254234558|ref|ZP_04927881.1| MotC [Pseudomonas aeruginosa C3719]
gi|296390173|ref|ZP_06879648.1| flagellar motor protein [Pseudomonas aeruginosa PAb1]
gi|313106459|ref|ZP_07792690.1| chemotaxis protein MotC [Pseudomonas aeruginosa 39016]
gi|9947412|gb|AAG04849.1|AE004575_8 MotC [Pseudomonas aeruginosa PAO1]
gi|3721572|dbj|BAA33551.1| ORF1 [Pseudomonas aeruginosa]
gi|115584626|gb|ABJ10641.1| chemotaxis protein MotC [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166489|gb|EAZ52000.1| MotC [Pseudomonas aeruginosa C3719]
gi|310879192|gb|EFQ37786.1| chemotaxis protein MotC [Pseudomonas aeruginosa 39016]
Length = 246
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++G+ + + I+GG + GG+ L+ +IV G L ++ P+ V+K G+ +L
Sbjct: 5 SLVGIILAFVAIVGGNFLEGGHAGALLNGPAALIVIGGTLAAALLQTPVNVLK-RGLGML 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +D + +++ M K+G + DPY
Sbjct: 64 GWVFFPPR-EDLSGGIDRIVSWSMTARKEGLLGLESIADAEPDPYARKGLQ--------- 113
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIGIV 178
++V A I +++ E+D+ E L+ MG P IGI+
Sbjct: 114 ------------LLVDGAEPEVIRSIL--EVDLFTQESRDLQAAKVFESMGGYAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I MGNL+ +P LG+ I V+ T+ G+ + L P+ +++K+ L+Q R
Sbjct: 160 GAVMGLIHVMGNLA-NPAQLGSGIAVAFVATIYGVGFANLLLLPIGNKLKTLVLRQSRYR 218
Query: 239 IIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 219 EMLLEGLLSIAEGENPR 235
>gi|126649534|ref|ZP_01721775.1| flagellar motor protein MotA [Bacillus sp. B14905]
gi|126593859|gb|EAZ87782.1| flagellar motor protein MotA [Bacillus sp. B14905]
Length = 267
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 123/290 (42%), Gaps = 53/290 (18%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S++IGL I + ++ G G + P I+I+ + +A P++ +K
Sbjct: 4 SSVIGLIIAFIALLTGMVMKGVSLTAFYNPAAILIIIFGTISAVTIAFPMQELKRVPKLF 63
Query: 62 LEIFGYKALGQD--------TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
+F L D + D+ + +L K + I+DP
Sbjct: 64 KILFKETKLANDIEIIKMFSQWADLARREGLLALESKA-------SEIEDP--------- 107
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA-----ISHM 168
F+ + + + I G Y I +++ EE+ E ++ HA +
Sbjct: 108 -----------FLKNGLTLAIDGQNADY-IRDVLTEEV-----EAMEERHASGSAIFTQA 150
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G P +G++GA++G+I A+ +++ K LG AI + TLLGI Y L +P +++K
Sbjct: 151 GTYAPTLGVLGAVVGLIAALADMNDIEK-LGHAISAAFMATLLGIFTGYVLWHPFANKLK 209
Query: 229 ---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ +KQ R+ I + +++ + G P+V + L + ER I +
Sbjct: 210 RKSALEVKQKRMMI---EGILSVLEGEAPRVIEQKLSSYLTMEERRQISV 256
>gi|167034900|ref|YP_001670131.1| flagellar motor protein [Pseudomonas putida GB-1]
gi|166861388|gb|ABY99795.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
Length = 246
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + I+GG + GG+ LI +IV G L ++ +PL K +
Sbjct: 5 SLIGLILAFVAIVGGNFLEGGHVGALINGPAALIVLGGTLAAALLQSPLSSFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
L++L +++ R + ID N ++ +L +
Sbjct: 60 ----------------LQILRWILFP----PRVDLAGGIDRVVNWSLTARKEGLLGLESV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D + E ++ MG P IG
Sbjct: 100 ADSEPDPYARKGLQLLVDGAEPEAIRSIL--EVDFLTQEARDIQAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG I V+ T+ G+ + + P+ +++K+ ++Q R
Sbjct: 158 IIGAVMGLIHVMGNLA-DPSQLGNGIAVAFVATIYGVASANLILLPIANKLKANVMRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|70729062|ref|YP_258798.1| flagellar motor protein [Pseudomonas fluorescens Pf-5]
gi|68343361|gb|AAY90967.1| flagellar motor protein MotA [Pseudomonas fluorescens Pf-5]
Length = 246
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + + IIGG Y GG+ L +IV G +G ++ +PL K +
Sbjct: 5 SLIGIIMAFVAIIGGNYLEGGHLSALANGPAALIVLGGTIGAALLQSPLSAFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+++L +++ R + ID N ++ +L +
Sbjct: 60 ----------------MQILAWILFP----PRVDLPGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D E ++ MG P IG
Sbjct: 100 ADAEPDSYARKGLQLLVDGAEPEAIRSIL--EVDFYTQESRDIEAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG+ I V+ T+ G+ + + P+ +++KS L+Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVASANLVLLPIAAKLKSVALRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + +++ G P+
Sbjct: 217 YREMLLEGILSIAEGENPR 235
>gi|167629588|ref|YP_001680087.1| flagellar motor component mota, putative [Heliobacterium
modesticaldum Ice1]
gi|167592328|gb|ABZ84076.1| flagellar motor component mota, putative [Heliobacterium
modesticaldum Ice1]
Length = 260
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 29/259 (11%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
A G N +L+ P I+I+ + + P+K IK L +FG + ++
Sbjct: 22 AKGANIAVLVNPAAIIIIFVGTFAALLNSFPMKEIK----KLPTLFGI--IFKEQKLTEP 75
Query: 80 KLLYILMYNLKKGSRNE----TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
K++ M ++ + +R E E ID LE F+ + +R+I+
Sbjct: 76 KVIIQQMTDMAQQARREGLLSLEASIDK-------------LEE----PFLRNGIRLIVD 118
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
G + + L++ EI + + G P +G++GA++G+I A+GNL+
Sbjct: 119 GQGEEF-VRELLEAEIAAMEERHRVGAQIFTSAGSYAPTLGVLGAVIGLIGALGNLNDVN 177
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
K LGT I + TL GI Y L +P +++K ++ +L ++ + +++ G+ P
Sbjct: 178 K-LGTMIAAAFVATLFGIFTGYVLWHPFATKLKRKSAEEVKLKTMMLEGILSIQVGSSPI 236
Query: 256 VAIEYGRKVLPLSERPSIE 274
E L +ER ++E
Sbjct: 237 QIREKMMIHLTQAERAALE 255
>gi|152987197|ref|YP_001349220.1| flagellar motor protein [Pseudomonas aeruginosa PA7]
gi|150962355|gb|ABR84380.1| probable chemotaxis transmembrane proton channel [Pseudomonas
aeruginosa PA7]
Length = 246
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++G+ + + I+GG + GG+ L+ +IV G L ++ P+ V+K G+ +L
Sbjct: 5 SLVGIILAFVAIVGGNFLEGGHAGALLNGPAALIVIGGTLAAALLQTPVNVLK-RGLGML 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +D + +++ M K+G + DPY
Sbjct: 64 GWVFFPPR-EDLAGGIDRIVAWSMTARKEGLLGLESIADAEADPYARKGLQ--------- 113
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIGIV 178
++V A I +++ E+D+ E L+ MG P IGI+
Sbjct: 114 ------------LLVDGAEPEVIRSIL--EVDLFTQEGRDLQAAKVFESMGGYAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I MGNL+ +P LG+ I V+ T+ G+ + L P+ +++K+ L+Q R
Sbjct: 160 GAVMGLIHVMGNLA-NPAQLGSGIAVAFVATIYGVGFANLLLLPIGNKLKTLVLRQSRYR 218
Query: 239 IIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 219 EMLLEGLLSIAEGENPR 235
>gi|2853602|gb|AAC08066.1| MotA [Pseudomonas putida]
Length = 246
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K +
Sbjct: 5 SLIGLILAFVAIVGGNFLEGGHAGALVNGPAALIVLGGTLAAALLQSPLSSFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
L++L +++ R + ID N ++ +L +
Sbjct: 60 ----------------LQILRWILFP----PRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D + E ++ MG P IG
Sbjct: 100 ADAEPDPYARKGLQLLVDGAEPEAIRSIL--EVDFLTQESRDIQAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG I V+ T+ G+ + + P+ +++K+ ++Q R
Sbjct: 158 IIGAVMGLIHVMGNLA-DPSQLGNGIAVAFVATIYGVASANLILLPVANKLKANVMRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|26991026|ref|NP_746451.1| flagellar motor protein [Pseudomonas putida KT2440]
gi|24986056|gb|AAN69915.1|AE016630_6 flagellar motor protein MotA [Pseudomonas putida KT2440]
Length = 246
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K +
Sbjct: 5 SLIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGTLAAALLQSPLTSFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
L++L +++ R + ID N ++ +L +
Sbjct: 60 ----------------LQILRWILFP----PRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D++ E ++ MG P IG
Sbjct: 100 ADSEPDPYARKGLQLLVDGAEPEAIRSIL--EVDLLTQEGRDIQAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG I V+ T+ G+ + + P+ S++K+ ++Q R
Sbjct: 158 IIGAVMGLIHVMGNLA-DPSQLGNGIAVAFVATIYGVASANLVLLPVASKLKAIVMRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|254517025|ref|ZP_05129083.1| chemotaxis MotA protein [gamma proteobacterium NOR5-3]
gi|219674530|gb|EED30898.1| chemotaxis MotA protein [gamma proteobacterium NOR5-3]
Length = 265
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 22/253 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++G+ + + I+GG + GG+ LIQ VIV G LG ++ PL+ +++ L
Sbjct: 24 TLLGVTMAVGAILGGNWLEGGHLSALIQLTAFVIVIGGTLGAVLVQTPLRDFREA----L 79
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
F + L +Y L + ++ + +R + ++ P L L
Sbjct: 80 RRFSWVLL-PPSYDRQAVLAKTIEWS--RVARRDGLLALEQRVGKE-----PDSLTQKGL 131
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++V I +MD EID + + + MG P IGI+GA+L
Sbjct: 132 Q---------LLVDGLEPEAIRTVMDVEIDNAMAKDARAAKVYDAMGGYSPTIGIIGAVL 182
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG I V+ T+ G+ + P+ +++++ Q + + +V
Sbjct: 183 GLIDVMNNLS-DPAQLGAGIAVAFVATIYGVGFANLFYLPIANKLRAISGDQMQYHEMVV 241
Query: 243 KALIAYMNGAIPQ 255
+ +G PQ
Sbjct: 242 DGIAMIADGDNPQ 254
>gi|104782796|ref|YP_609294.1| flagellar motor protein [Pseudomonas entomophila L48]
gi|95111783|emb|CAK16507.1| flagellar motor protein MotA [Pseudomonas entomophila L48]
Length = 246
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + I+GG + GG+ LI +IV G L ++ +PL K +
Sbjct: 5 SLIGLILAFVAIVGGNFLEGGHAGALINGPAALIVLGGTLAAALLQSPLSSFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
L+++ + + R + ID N ++ +L +
Sbjct: 60 ----------------LQIVRWIFFP----PRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D + E ++ MG P IG
Sbjct: 100 ADAEPDPYARKGLQLLVDGAEPEAIRSIL--EVDFLTQEARDIQAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG I V+ T+ G+ + + P+ +++K+ L+Q R
Sbjct: 158 IIGAVMGLIHVMGNLA-DPSQLGNGIAVAFVATIYGVASANLILLPIANKLKAVTLRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|229917740|ref|YP_002886386.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sp. AT1b]
gi|229469169|gb|ACQ70941.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sp. AT1b]
Length = 260
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 125/291 (42%), Gaps = 39/291 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++GL + L ++GG G LI P +VI+ FV + VS+
Sbjct: 5 TLVGLILGFLTLVGGMLLKGAGVAPLINPAAMVII-------FVGTA-------AAVSI- 49
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTI---FTSIPTVLEN 119
A+ ++ +V KL IL + S++ D S+ T LE
Sbjct: 50 ------AVSKEQLQNVPKLFKILFKKQELPSKSGLLTQFVDLSTQARKEGLLSLETALEQ 103
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
E F+ M M+I G Y I +M +I+ + + G P +G++G
Sbjct: 104 VE-EPFLRQGMMMVIDGQPSEY-IAEVMSRDIENMEQRHKANADIFTQAGTYAPTLGVLG 161
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH-RLY 238
A++G+I A+ +LS K LG AI + TL GI Y L P + +LKQ+ +
Sbjct: 162 AVIGLIAALKDLSDIEK-LGHAISAAFVATLFGIFTGYVLWFPF-----ANKLKQYSKSE 215
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+I+K+ +I + ++I+ G L ++ S+ + +E Y K+A
Sbjct: 216 VIIKEMMIEGI------LSIQSGESPKTLEDKLSVYLSPKERADYEAQKEA 260
>gi|46579054|ref|YP_009862.1| chemotaxis protein PomA [Desulfovibrio vulgaris str. Hildenborough]
gi|120603362|ref|YP_967762.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|46448467|gb|AAS95121.1| chemotaxis protein PomA [Desulfovibrio vulgaris str. Hildenborough]
gi|120563591|gb|ABM29335.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|311232900|gb|ADP85754.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 250
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 10 TILCIIGGFYA------MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDS-GVSLL 62
T++ I+GGF +GG+ + +VIV G + ++ PL+V+ S G+++
Sbjct: 5 TLIGIVGGFALIIIAILLGGSLMPFVDIPSVVIVIGGTITAILVMFPLEVVLGSMGIAMR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
K T D+ KL +R E+ ++ V +E
Sbjct: 65 TFKFNKENPVQTVEDICKL--------ADTARRES------------LVALEKVPLQDE- 103
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ +RM+ G+++ ++ L+D EI+ + + +G + PA G++G ++
Sbjct: 104 --FLKKGIRMVADGSSQD-QVTALLDAEINFMKQRHRRGQAVFKGLGSAAPAFGMIGTLV 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G++ + NLS P +G A+ V+L T G +LS + P+ +++ + + +
Sbjct: 161 GLVNMLQNLS-DPASIGPAMAVALLTTFYGAVLSNLMFLPMAKKLEERSFDEQFMMQLKM 219
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ +++ +NG PQ+ E LP + RP
Sbjct: 220 EGVLSILNGEHPQLVKEKLMAFLPPNLRP 248
>gi|16802727|ref|NP_464212.1| flagellar motor protein MotA [Listeria monocytogenes EGD-e]
gi|46906936|ref|YP_013325.1| flagellar motor protein MotA [Listeria monocytogenes serotype 4b
str. F2365]
gi|47095251|ref|ZP_00232862.1| chemotaxis protein MotA [Listeria monocytogenes str. 1/2a F6854]
gi|224498767|ref|ZP_03667116.1| flagellar motor protein MotA [Listeria monocytogenes Finland 1988]
gi|224502010|ref|ZP_03670317.1| flagellar motor protein MotA [Listeria monocytogenes FSL R2-561]
gi|226223316|ref|YP_002757423.1| motility protein (flagellar motor rotation) MotA [Listeria
monocytogenes Clip81459]
gi|254829342|ref|ZP_05234029.1| motility protein [Listeria monocytogenes FSL N3-165]
gi|254830324|ref|ZP_05234979.1| flagellar motor protein MotA [Listeria monocytogenes 10403S]
gi|254853111|ref|ZP_05242459.1| motility protein [Listeria monocytogenes FSL R2-503]
gi|254900079|ref|ZP_05260003.1| flagellar motor protein MotA [Listeria monocytogenes J0161]
gi|254911368|ref|ZP_05261380.1| flagellar motor protein MotA [Listeria monocytogenes J2818]
gi|254935695|ref|ZP_05267392.1| motility protein [Listeria monocytogenes F6900]
gi|254993371|ref|ZP_05275561.1| flagellar motor protein MotA [Listeria monocytogenes FSL J2-064]
gi|255026596|ref|ZP_05298582.1| flagellar motor protein MotA [Listeria monocytogenes FSL J2-003]
gi|255028360|ref|ZP_05300311.1| flagellar motor protein MotA [Listeria monocytogenes LO28]
gi|284801015|ref|YP_003412880.1| flagellar motor protein MotA [Listeria monocytogenes 08-5578]
gi|284994157|ref|YP_003415925.1| flagellar motor protein MotA [Listeria monocytogenes 08-5923]
gi|300764497|ref|ZP_07074490.1| chemotaxis protein MotA [Listeria monocytogenes FSL N1-017]
gi|5305455|gb|AAD41659.1| motility protein [Listeria monocytogenes]
gi|16410074|emb|CAC98763.1| lmo0685 [Listeria monocytogenes EGD-e]
gi|46880202|gb|AAT03502.1| chemotaxis protein MotA [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016322|gb|EAL07244.1| chemotaxis protein MotA [Listeria monocytogenes str. 1/2a F6854]
gi|225875778|emb|CAS04481.1| Putative motility protein (flagellar motor rotation) MotA [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601754|gb|EEW15079.1| motility protein [Listeria monocytogenes FSL N3-165]
gi|258606461|gb|EEW19069.1| motility protein [Listeria monocytogenes FSL R2-503]
gi|258608277|gb|EEW20885.1| motility protein [Listeria monocytogenes F6900]
gi|284056577|gb|ADB67518.1| flagellar motor protein MotA [Listeria monocytogenes 08-5578]
gi|284059624|gb|ADB70563.1| flagellar motor protein MotA [Listeria monocytogenes 08-5923]
gi|293589304|gb|EFF97638.1| flagellar motor protein MotA [Listeria monocytogenes J2818]
gi|300514851|gb|EFK41905.1| chemotaxis protein MotA [Listeria monocytogenes FSL N1-017]
Length = 283
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 30/264 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVK----- 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTV 116
V KL IL K + + + + D+ S + +V
Sbjct: 58 ----------------VVPKLFKILFTKEKMPDKVDVLVQYKEYADEIRRSGVLALEDSV 101
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAI 175
E + F+ MR+++ G + + ++++EE+ + E+ Y I + G P +
Sbjct: 102 DEIED--PFMKRGMRLVVDGQSSPEFLRDVLEEEV-ASMEERHAAYAKIFASAGAYAPTL 158
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 159 GVLGAAMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEV 217
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 218 HLRYMMIEGVVALQERNAPRVVEE 241
>gi|148546770|ref|YP_001266872.1| flagellar motor protein [Pseudomonas putida F1]
gi|148510828|gb|ABQ77688.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida F1]
Length = 246
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K +
Sbjct: 5 SLIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGTLAAALLQSPLSSFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
L++L +++ R + ID N ++ +L +
Sbjct: 60 ----------------LQILRWILFP----PRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D + E ++ MG P IG
Sbjct: 100 ADSEPDPYARKGLQLLVDGAEPEAIRSIL--EVDFLTQEGRDIQAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG I V+ T+ G+ + + P+ S++K+ ++Q R
Sbjct: 158 IIGAVMGLIHVMGNLA-DPSQLGNGIAVAFVATIYGVASANLVLLPVASKLKAIVMRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|107100894|ref|ZP_01364812.1| hypothetical protein PaerPA_01001924 [Pseudomonas aeruginosa PACS2]
gi|218892667|ref|YP_002441536.1| flagellar motor protein [Pseudomonas aeruginosa LESB58]
gi|254239809|ref|ZP_04933131.1| MotC [Pseudomonas aeruginosa 2192]
gi|126193187|gb|EAZ57250.1| MotC [Pseudomonas aeruginosa 2192]
gi|218772895|emb|CAW28707.1| MotC [Pseudomonas aeruginosa LESB58]
Length = 246
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++G+ + + I+GG + GG+ L+ +IV G L ++ P+ V+K G+ +L
Sbjct: 5 SLVGITLAFVAIVGGNFLEGGHAGALLNGPAALIVIGGTLAAALLQTPVNVLK-RGLGML 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +D + +++ M K+G + DPY
Sbjct: 64 GWVFFPPR-EDLSGGIDRIVSWSMTARKEGLLGLESIADAEPDPYARKGLQ--------- 113
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIGIV 178
++V A I +++ E+D+ E L+ MG P IGI+
Sbjct: 114 ------------LLVDGAEPEVIRSIL--EVDLFTQESRDLQAAKVFESMGGYAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I MGNL+ +P LG+ I V+ T+ G+ + L P+ +++K+ L+Q R
Sbjct: 160 GAVMGLIHVMGNLA-NPAQLGSGIAVAFVATIYGVGFANLLLLPIGNKLKTLVLRQSRYR 218
Query: 239 IIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 219 EMLLEGLLSIAEGENPR 235
>gi|254974361|ref|ZP_05270833.1| putative chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091755|ref|ZP_05321233.1| putative chemotaxis protein [Clostridium difficile CIP 107932]
gi|255313485|ref|ZP_05355068.1| putative chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255516173|ref|ZP_05383849.1| putative chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255649269|ref|ZP_05396171.1| putative chemotaxis protein [Clostridium difficile QCD-37x79]
gi|260682441|ref|YP_003213726.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260686040|ref|YP_003217173.1| putative chemotaxis protein [Clostridium difficile R20291]
gi|306519370|ref|ZP_07405717.1| putative chemotaxis protein [Clostridium difficile QCD-32g58]
gi|260208604|emb|CBA61320.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260212056|emb|CBE02636.1| putative chemotaxis protein [Clostridium difficile R20291]
Length = 262
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 31/257 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T+I + I ++ F GG+ +L ++V G +G + P V K S
Sbjct: 1 MTTLIFFIVGIASLVVAFVIDGGHIGVLFVFSSALVVFGGTIGAVGASTPFPVFKKS--- 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI------DDPYNSTIFTSIP 114
+ I++ K N EN I + +
Sbjct: 58 ---------------------IKIMLLAFKNKKPNNIENIIYFKEIATKARKEGLLSVDK 96
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+ EN+EL FI + +++ G + I N+++ +I I + G P
Sbjct: 97 EISENDELDPFIRKGLELMVDG-VDAVTIRNILESQIQITSKRHKEGIAIFDSAGGYAPT 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+GI+G ++G++ +GNLS +P LG I V+ TL G+ + + P+ S++K+ ++
Sbjct: 156 LGIIGTVMGLVHILGNLSSNPDALGPQISVAFLATLYGVGSANLIWLPIASKLKAINQQE 215
Query: 235 HRLYIIVKKALIAYMNG 251
++V +A+++ + G
Sbjct: 216 ISERLLVIEAILSILEG 232
>gi|296329694|ref|ZP_06872179.1| flagellar motor protein MotA [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674091|ref|YP_003865763.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153192|gb|EFG94056.1| flagellar motor protein MotA [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412335|gb|ADM37454.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 270
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 118/259 (45%), Gaps = 29/259 (11%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + L P I+I+ + V+A P K IK V
Sbjct: 4 TSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKK--VPA 61
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE----TENHIDDPYNSTIFTSIPTVL 117
L ++ L ++ ++ L + + +R E E I+D +
Sbjct: 62 L----FRVLFKENKQLTIEELIPMFSEWAQLARREGLLALEASIEDVDD----------- 106
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
TF+ + + M + G + + I ++M EE++ + + G P +G+
Sbjct: 107 ------TFLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGV 159
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA++G+I A+ ++ + + LG AI + TLLGI Y L +P +++K ++ +L
Sbjct: 160 LGAVIGLIAALSHMDNTDE-LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKL 218
Query: 238 YIIVKKALIAYMNGAIPQV 256
++ + +++ + G P+V
Sbjct: 219 REVMIEGVLSVLEGQAPKV 237
>gi|220932515|ref|YP_002509423.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
gi|219993825|gb|ACL70428.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
Length = 267
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 126/263 (47%), Gaps = 31/263 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMA---NPLKVIKDS 57
+ST+IG+ +T + ++GG MGGN I + ++IV G L G +++ N LK I
Sbjct: 3 LSTLIGI-LTGIVLLGGAIIMGGNAVIFLSVQSLMIVLGGTLAGTMVSYSFNELKKIP-- 59
Query: 58 GVSLLEI-FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
SL+ + F L D D+L + +R E ++ V
Sbjct: 60 --SLIRVAFQEHTLDSDEIIDIL-------VGFAEKARREGLLALEQ-----------DV 99
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+E N+ F+ +++++ G + N+++ ++ + K S MG+ P+ G
Sbjct: 100 MEIND--PFLQKGIQLVVDGTDPEL-VRNILETKLTFLEERHQKGRGLFSTMGQLAPSFG 156
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++G ++G+I+ + L P LG+ + V+L TL G +L+ L NPL +++ L++
Sbjct: 157 LIGTLIGLIQMLSQLD-DPTNLGSGMAVALITTLYGALLANLLFNPLAGKLRIRSLEEVL 215
Query: 237 LYIIVKKALIAYMNGAIPQVAIE 259
L ++ + +++ G P++ E
Sbjct: 216 LKEVMIEGVLSIQAGENPRIVRE 238
>gi|52842008|ref|YP_095807.1| flagellar motor protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54297694|ref|YP_124063.1| flagellar motor protein [Legionella pneumophila str. Paris]
gi|52629119|gb|AAU27860.1| flagellar motor protein MotA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53751479|emb|CAH12897.1| flagellar motor protein MotA [Legionella pneumophila str. Paris]
gi|307610481|emb|CBX00053.1| flagellar motor protein MotA [Legionella pneumophila 130b]
Length = 257
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 22/254 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+IGL L II G GG+ L+ ++IV G LG ++ PL K + L
Sbjct: 5 TLIGLLTGFLAIIVGQIFEGGDLNSLLNFPALLIVMGGTLGAVMVQTPLTTFKRAFRILP 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + + L L ++ E+ +D N I+ +
Sbjct: 65 WVVKPP---HHNFEECRTTLIELSRKARQLGLLSLEDRLDVETNPLIYKGLE-------- 113
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++V + +++ EID ++ L+ H MG P IGI+GA+L
Sbjct: 114 ----------LLVTGVDKLTLRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTIGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ M NL+ P LG I V+ T+ G+ + P+ +++KS + +V
Sbjct: 164 GLIQVMRNLA-DPSQLGLGIAVAFVATIYGVGFANLFFLPVANKLKSCISHKVHFDEMVV 222
Query: 243 KALIAYMNGAIPQV 256
+ L+A +G P +
Sbjct: 223 EGLVAMASGESPNM 236
>gi|269792935|ref|YP_003317839.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100570|gb|ACZ19557.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 262
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 118/265 (44%), Gaps = 35/265 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++IG + ++ +IGG A GG+P + ++I G LG +MANP++ K +
Sbjct: 3 LASVIGFLLALILVIGGILA-GGDPGAFVDAPSLLITGGGTLGAAIMANPIERTK----A 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG------SRNETENHIDDPYNSTIFTSIP 114
L +I KA D D+ L+ L+ +K + E +DDP
Sbjct: 58 LPKII-RKAFFNDP-IDLPGLIQTLVSFAEKARWEGLLALEEDAAQLDDP---------- 105
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
F+ +++++ G +++++D EI ++ M E PA
Sbjct: 106 ----------FLKKSIQLVVDGTDPEL-VKSILDTEIGLLEERHGAGKAYFDTMAELAPA 154
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G++G ++G+I +GNL P LG + +L T G ++ LC P + ++ ++
Sbjct: 155 FGMLGTLIGLILMLGNL-DDPDALGPGMATALITTFYGSFIANVLCIPTSKKLAYRSSQE 213
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIE 259
++ + ++A G P++ E
Sbjct: 214 VLARELMVEGILAIQAGENPRIVEE 238
>gi|145298725|ref|YP_001141566.1| flagellar motor component MotA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851497|gb|ABO89818.1| Flagellar motor component MotA [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 252
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 28/230 (12%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL I+CI+GG + GG+P L+ +IV G +G + P V+ +
Sbjct: 2 SLIGLLFAIICILGGNFIEGGHPSALLDLPAFLIVIGGTIGAALTQFPFSVVGKT----- 56
Query: 63 EIFGYKALGQDTYCDVL---KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+K L D+L +LL + N ++ E ID+ + + + +++
Sbjct: 57 -FKRFKWLLSPPKLDMLEQAQLLETMAANARRSGMLALEGMIDEIKDPFLKKGVQMMVDG 115
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
E T ++ N +E E+L E + YE MG P +GIVG
Sbjct: 116 YEKTKI------HEVLENEIEFEHEDL---EQTVKFYEA---------MGGYCPTMGIVG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
A+ G+I AMG L +P LG AI V+ T+ G+ + + P ++ K
Sbjct: 158 AVFGLIHAMG-LLDAPDKLGGAIAVAFIATIYGVGAANLIFLPFGNRYKG 206
>gi|116872074|ref|YP_848855.1| flagellar motor protein MotA [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740952|emb|CAK20072.1| chemotaxis (flagellar motor rotation) protein MotA [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 279
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 30/264 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVK----- 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTV 116
V KL IL K + + + + D+ S + +V
Sbjct: 58 ----------------VVPKLFKILFTKEKMPDKVDVLVQYKEYADEIRRSGVLALEDSV 101
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAI 175
E + F+ MR+++ G + + ++++EE+ + E+ Y I + G P +
Sbjct: 102 DEIED--PFMKRGMRLVVDGQSSPEFLRDVLEEEV-ASMEERHAAYAKIFASAGAYAPTL 158
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 159 GVLGAAMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEV 217
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 218 HLRYMMIEGVVALQERNAPRVVEE 241
>gi|299535179|ref|ZP_07048503.1| chemotaxis protein motA [Lysinibacillus fusiformis ZC1]
gi|298729300|gb|EFI69851.1| chemotaxis protein motA [Lysinibacillus fusiformis ZC1]
Length = 267
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 120/283 (42%), Gaps = 43/283 (15%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S+IIGL + ++ ++ G G + P I+I+ + +A P++ +K
Sbjct: 4 SSIIGLILALVALLTGMVMKGVSLSAFYNPAAILIIIFGTISAVTIAFPMQELKRVPKLF 63
Query: 62 LEIFGYKALGQD--------TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
+F L D + D+ + +L K + I+DP
Sbjct: 64 KILFKETKLANDIEIIKMFSQWADLARREGLLALESKA-------SEIEDP--------- 107
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
F+ + + + I G Y I +++ EE++ + + G P
Sbjct: 108 -----------FLKNGLTLAIDGQNADY-IRDVLTEEVEAMEERHTSGAAIFTQAGTYAP 155
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---ST 230
+G++GA++G+I A+ +++ K LG AI + TLLGI Y L +P +++K +
Sbjct: 156 TLGVLGAVVGLIAALADMNDIEK-LGHAISAAFMATLLGIFTGYVLWHPFANKLKRKSAL 214
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+KQ R+ I + +++ + G P+V + L + ER I
Sbjct: 215 EVKQKRMMI---EGILSVLEGEAPRVIEQKLSSYLTMEERRQI 254
>gi|290893980|ref|ZP_06556955.1| motility protein [Listeria monocytogenes FSL J2-071]
gi|315281339|ref|ZP_07869985.1| chemotaxis protein MotA [Listeria marthii FSL S4-120]
gi|290556426|gb|EFD89965.1| motility protein [Listeria monocytogenes FSL J2-071]
gi|313615015|gb|EFR88513.1| chemotaxis protein MotA [Listeria marthii FSL S4-120]
Length = 283
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 30/264 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVK----- 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTV 116
V KL IL K + + + + D+ S + +V
Sbjct: 58 ----------------VVPKLFKILFTKEKMPDKVDVLVQYKEYADEIRRSGVLALEDSV 101
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAI 175
E + F+ MR+++ G + + ++++EE+ + E+ Y I + G P +
Sbjct: 102 DEIED--PFMKRGMRLVVDGQSSPEFLRDVLEEEV-ASMEERHAAYAKIFASAGAYAPTL 158
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 159 GVLGAAMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEV 217
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 218 HLRYMMIEGVVALQERNAPRVVEE 241
>gi|255017133|ref|ZP_05289259.1| flagellar motor protein MotA [Listeria monocytogenes FSL F2-515]
Length = 246
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 30/264 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVK----- 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTV 116
V KL IL K + + + + D+ S + +V
Sbjct: 58 ----------------VVPKLFKILFTKEKMPDKVDVLVQYKEYADEIRRSGVLALEDSV 101
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAI 175
E + F+ MR+++ G + + ++++EE+ + E+ Y I + G P +
Sbjct: 102 DEIED--PFMKRGMRLVVDGQSSPEFLRDVLEEEV-ASMEERHAAYAKIFASAGAYAPTL 158
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++GA +G+I AMG +S +P L AI + T+ GI Y L P +++K K+
Sbjct: 159 GVLGAAMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEV 217
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++A P+V E
Sbjct: 218 HLRYMMIEGVVALQERNAPRVVEE 241
>gi|310639573|ref|YP_003944331.1| mota/tolq/exbb proton channel [Paenibacillus polymyxa SC2]
gi|309244523|gb|ADO54090.1| MotA/TolQ/ExbB proton channel [Paenibacillus polymyxa SC2]
Length = 264
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI--SHMGESLPAIGIVGAIL 182
F+ MRMII GN + + + LM+ DI E A+ S G P +G++GA++
Sbjct: 109 FMRGGMRMIIDGNDQEFVRDVLME---DINATEDRHRAGALIFSQAGMYAPTLGVLGAVV 165
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I A+ +LS K L AI + TLLGI Y L +P+++++K K+ L +++
Sbjct: 166 GLIAALADLSDMEK-LSHAIAAAFIATLLGIFTGYVLWHPMSNKLKRLSKKEVELKLMMV 224
Query: 243 KALIAYMNGAIPQVAIEYGRKV-LPLSERPSI 273
+ L++ +G I +AI + L +ER S+
Sbjct: 225 EGLLSIQSG-ISTIAISQKLAIFLTPTERASM 255
>gi|325271955|ref|ZP_08138406.1| flagellar motor protein [Pseudomonas sp. TJI-51]
gi|324102903|gb|EGC00299.1| flagellar motor protein [Pseudomonas sp. TJI-51]
Length = 246
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K +
Sbjct: 5 SLIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGTLAAALLQSPLASFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
L++L +++ R + ID N ++ +L +
Sbjct: 60 ----------------LQILRWILFP----PRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D + E ++ MG P IG
Sbjct: 100 ADSEPDPYARKGLQLLVDGAEPEAIRSIL--EVDFLTQESRDIQAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG I V+ T+ G+ + + P+ +++K+ ++Q R
Sbjct: 158 IIGAVMGLIHVMGNLA-DPSQLGNGIAVAFVATIYGVASANLVLLPIANKLKAVVMRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|87307402|ref|ZP_01089547.1| chemotaxis pomA protein [Blastopirellula marina DSM 3645]
gi|87290142|gb|EAQ82031.1| chemotaxis pomA protein [Blastopirellula marina DSM 3645]
Length = 244
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 28/258 (10%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
A G + I +++V G + +MA PLK I S ++L F L + T DV+
Sbjct: 9 APGSSLAAFIDAPSLLVVCGGAVAACMMAFPLKSIVGSPMALKVCF----LNKPT--DVV 62
Query: 80 KLLYILMYNLKKGSRN---ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG 136
L+ ++ + R+ E I + N I I + V
Sbjct: 63 ALIKEIVSLAETARRDGLLALEGRIAEISNPFIIVGI------------------QMAVD 104
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
AR IE+L+ EID + MG PA G++G +LG+I +GN+S P
Sbjct: 105 GARPDVIEDLLRTEIDAVATRHRDTKAIYDQMGRFAPAYGMIGTLLGLIIMLGNMSD-PS 163
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+G+ + V+L TL G I+S + P ++ ++ I+ + ++A +G P+V
Sbjct: 164 SIGSGMAVALLTTLYGAIVSNCVFLPFAEKLSFLNKQELLTMEIIVRGIMAIQSGENPRV 223
Query: 257 AIEYGRKVLPLSERPSIE 274
+ R LP + R E
Sbjct: 224 IEQKLRTFLPPAARKKSE 241
>gi|16078433|ref|NP_389252.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309233|ref|ZP_03591080.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313561|ref|ZP_03595366.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318483|ref|ZP_03599777.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322756|ref|ZP_03604050.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. SMY]
gi|127247|sp|P28611|MOTA_BACSU RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|143207|gb|AAA22602.1| motility protein A [Bacillus subtilis]
gi|2633740|emb|CAB13242.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus subtilis subsp. subtilis str. 168]
Length = 270
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 123/273 (45%), Gaps = 29/273 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + L P I+I+ + V+A P K IK V
Sbjct: 4 TSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKK--VPT 61
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE----TENHIDDPYNSTIFTSIPTVL 117
L ++ L ++ ++ L + + +R E E I+D ++
Sbjct: 62 L----FRVLFKENKQLTIEELIPMFSEWAQLARREGLLALEASIEDVDDA---------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F+ + + M + G + + I ++M EE++ + + G P +G+
Sbjct: 108 -------FLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGV 159
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA++G+I A+ ++ + + LG AI + TLLGI Y L +P +++K ++ +L
Sbjct: 160 LGAVIGLIAALSHMDNTDE-LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKL 218
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ + +++ + G P+V + LP +R
Sbjct: 219 REVMIEGVLSVLEGQAPKVIEQKLLMYLPAKDR 251
>gi|170722825|ref|YP_001750513.1| flagellar motor protein [Pseudomonas putida W619]
gi|169760828|gb|ACA74144.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
Length = 246
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K +
Sbjct: 5 SLIGLILAFVAIVGGNFLEGGHVGALLNGPAALIVLGGTLAAALLQSPLSSFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
L++L +++ R + ID N ++ +L +
Sbjct: 60 ----------------LQILRWIIFP----PRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D + E ++ MG P IG
Sbjct: 100 ADGEPDPYARKGLQLLVDGAEPEAIRSIL--EVDFLTQEGRDIQAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG I V+ T+ G+ + + P+ S++K+ ++Q R
Sbjct: 158 IIGAVMGLIHVMGNLA-DPSQLGNGIAVAFVATIYGVASANLILLPVASKLKAIVMRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|255099859|ref|ZP_05328836.1| putative chemotaxis protein [Clostridium difficile QCD-63q42]
gi|255305747|ref|ZP_05349919.1| putative chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 262
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 19/251 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T+I + I ++ F GG+ L ++V G +G + P V K S
Sbjct: 1 MTTLIFFIVGIASLVVAFVIDGGHVGALFVFSSALVVFGGTIGAVGASTPFPVFKKSIKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L F K ++ ++Y + +R E ID + EN+
Sbjct: 61 MLLAFKNK-----KPNNIENIIY--FKEIATKARKEGLLSIDKEIS-----------END 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL FI + +++ G + I N+++ +I I + G P +GI+G
Sbjct: 103 ELDPFIRKGLELMVDG-VDAVTIRNILESQIQITSKRHKEGIAIFDSAGGYAPTLGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS +P LG I V+ TL G+ + + P+ S++K+ ++ ++
Sbjct: 162 VMGLVHILGNLSSNPDALGPQISVAFLATLYGVGSANLIWLPIASKLKAINQQEVSERLL 221
Query: 241 VKKALIAYMNG 251
V +A+++ + G
Sbjct: 222 VIEAILSILEG 232
>gi|321315124|ref|YP_004207411.1| flagellar motor protein MotA [Bacillus subtilis BSn5]
gi|320021398|gb|ADV96384.1| flagellar motor protein MotA [Bacillus subtilis BSn5]
Length = 270
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 123/273 (45%), Gaps = 29/273 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + L P I+I+ + V+A P K IK V
Sbjct: 4 TSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKK--VPA 61
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE----TENHIDDPYNSTIFTSIPTVL 117
L ++ L ++ ++ L + + +R E E I+D ++
Sbjct: 62 L----FRVLFKENKQLTIEELIPMFSEWAQLARREGLLALEASIEDVDDA---------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F+ + + M + G + + I ++M EE++ + + G P +G+
Sbjct: 108 -------FLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGV 159
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA++G+I A+ ++ + + LG AI + TLLGI Y L +P +++K ++ +L
Sbjct: 160 LGAVIGLIAALSHMDNTDE-LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKL 218
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ + +++ + G P+V + LP +R
Sbjct: 219 REVMIEGVLSVLEGQAPKVIEQKLLMYLPAKDR 251
>gi|291483904|dbj|BAI84979.1| flagellar motor protein MotA [Bacillus subtilis subsp. natto
BEST195]
Length = 269
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 123/273 (45%), Gaps = 29/273 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + L P I+I+ + V+A P K IK V
Sbjct: 4 TSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKK--VPA 61
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE----TENHIDDPYNSTIFTSIPTVL 117
L ++ L ++ ++ L + + +R E E I+D ++
Sbjct: 62 L----FRVLFKENKQLTIEELIPMFSEWAQLARREGLLALEASIEDVDDA---------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F+ + + M + G + + I ++M EE++ + + G P +G+
Sbjct: 108 -------FLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGV 159
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA++G+I A+ ++ + + LG AI + TLLGI Y L +P +++K ++ +L
Sbjct: 160 LGAVIGLIAALSHMDNTDE-LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKL 218
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ + +++ + G P+V + LP +R
Sbjct: 219 REVMIEGVLSVLEGQAPKVIEQKLLMYLPAKDR 251
>gi|189423112|ref|YP_001950289.1| MotA/TolQ/ExbB proton channel [Geobacter lovleyi SZ]
gi|189419371|gb|ACD93769.1| MotA/TolQ/ExbB proton channel [Geobacter lovleyi SZ]
Length = 249
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKV----IKD 56
++TIIGL + + GG G + LI P +IV G G ++ PL KD
Sbjct: 3 LATIIGLALGFGAVFGGAVLEGVHVSALISPTSALIVLGGTFGAVFISFPLAACINGFKD 62
Query: 57 SGVSLLE-IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT 115
+ L +A+ +D K + +L++ ++N DP
Sbjct: 63 IKTAFLPPKVDPEAVVKDIIGYATKARRNGLISLEQEAQNAK-----DP----------- 106
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLP 173
FI + +++ G E L E +I+ YE K + G P
Sbjct: 107 ---------FIKKGISLVVDGIDPQKLRETL---EAEIMAYEDHKKHSVEFFEAAGGYSP 154
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
IGI+GA+LG+I MGNLS + K LG I + T+ G++ + +C P+ S+IK R+K
Sbjct: 155 TIGIIGAVLGLIHVMGNLSDTSK-LGAGIAAAFVATIYGLMTANIICLPIGSKIK-IRMK 212
Query: 234 QHRL-YIIVKKALIAYMNGAIPQ 255
+ L +++ + LIA NG P
Sbjct: 213 EEVLRRVMIVEGLIAIQNGENPH 235
>gi|302185387|ref|ZP_07262060.1| flagellar motor protein [Pseudomonas syringae pv. syringae 642]
Length = 246
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 117/259 (45%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+
Sbjct: 5 SLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVVGGTLGASLLQSPM----------- 53
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + +K+++ +++ R + +D ++ +L +
Sbjct: 54 ----------NAFMRAMKIIHWIIFP----PRIDLPGGVDRVIGWSMTARKEGLLGLETV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D I E ++ MG P +G
Sbjct: 100 ADSEPDGYARKGLQLLVDGAEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTVG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+ +Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAIAHRQAR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|304407654|ref|ZP_07389305.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
gi|304343137|gb|EFM08980.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
Length = 265
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 22/256 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ ++ +IGGF GG L+Q +IV G ++ P ++ +
Sbjct: 3 LTTIIGIAAGLVALIGGFLLEGGQFSGLLQLTAAIIVFGGTFAAVAVSFPYSKLRQLPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D +L+ + M ++G + S+P L+N
Sbjct: 63 LRFAFTKQTQKPEEVID--QLVDMAMVARREGVL-------------ALERSLPE-LDN- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ D ++M+I G + ++ EID + + + G P +GI+G
Sbjct: 106 ---VYMRDGLQMVIDGTDPEL-TKGILTLEIDSAERKWEQQAKMLESAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NLS P LG +I V+ T TL G+ + + PL ++IK+ +Q L +
Sbjct: 162 VMGLIRVLSNLS-DPSSLGHSIAVAFTATLYGVASANIVYLPLGTKIKAQAAEQTLLMEL 220
Query: 241 VKKALIAYMNGAIPQV 256
+ + +++ G PQ+
Sbjct: 221 ILEGILSVQAGENPQL 236
>gi|119476295|ref|ZP_01616646.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
gi|119450159|gb|EAW31394.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
Length = 247
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 33/262 (12%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I G+ + IIGG Y GG+ L VIV G LG ++ P +K + L+
Sbjct: 5 SIFGVILGFAAIIGGNYLEGGSLSALANLPAAVIVLGGTLGAAMLQTPWSGMKLASRRLI 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F + D K++ + K+G + + E E
Sbjct: 65 WVFASPTYAFNKGVD--KIVRWAIAARKEG-----------------LLGLEAIAEV-EP 104
Query: 123 TTFICDYMRMIIVG----NARS-YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F +++++ G N R+ E+E++M E+ D+ + K Y + MG P IGI
Sbjct: 105 DFFARKGLQLLVDGCEPQNIRAVMEVESVMLEQRDV---DAAKFYES---MGGYAPTIGI 158
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA++G+I+ M NLS P LG I ++ T+ G+ L+ L P+ S+++S +
Sbjct: 159 IGAVMGLIQVMSNLSD-PSKLGAGIAIAFVATIYGVGLANLLLLPIASKLRSIARVEAEF 217
Query: 238 YIIVKKALIAYMNGAIPQVAIE 259
++ + +I+ G P+ AIE
Sbjct: 218 RDLIIEGIISIAEGENPK-AIE 238
>gi|78221682|ref|YP_383429.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
gi|78192937|gb|ABB30704.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
Length = 254
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 26/257 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + +IGG G + LIQP +IV G G ++ P+K I +
Sbjct: 3 IATIIGLVMGFGAVIGGALIEGLHLGALIQPTAALIVLGGTFGAAFVSYPMKTIIGA--- 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
D+ K+L+ ++ +K + N I S+ +N
Sbjct: 60 --------------VKDIRKVLFPAQHDPEKVIKEIIGYAAKARRNGLI--SLEQEAQNV 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAIGIV 178
+ F + +++ G E L EI+I YE+ A G P IGI+
Sbjct: 104 K-DAFTKKGISLVVDGIDPQKLRETL---EIEIAYYEEHSKQSAEFFEAAGGYAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA+LG+I M NLS S K LG I V+ T+ G++ + +C P ++IK ++
Sbjct: 160 GAVLGLIHVMANLSDSSK-LGAGIAVAFVATIYGLMTANIVCLPFGTKIKHGIKEELICK 218
Query: 239 IIVKKALIAYMNGAIPQ 255
++ + LIA NG P
Sbjct: 219 NMIIEGLIAIQNGENPH 235
>gi|83647834|ref|YP_436269.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83635877|gb|ABC31844.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 245
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I+G+ I ++ IIGG GG+ L+ +IV G LG V+ + KV+K S +
Sbjct: 5 SIVGVLIALVAIIGGNLIEGGDVSSLLNLPAALIVIGGTLGAIVLQHSGKVLKRSFTQFI 64
Query: 63 EIFGYKALGQDTYCD-VLKLLYILMYNLKKG-----SRNETENHIDDPYNSTIFTSIPTV 116
+F L ++ D + K++ M K+G S E E DP++
Sbjct: 65 WVFLPPYL---SFEDGIQKVISWSMVARKEGLLGLESVAEKER---DPFSRKGLQ----- 113
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
++V A I ++M+ E++ +L MG P +G
Sbjct: 114 ----------------LLVDGAEPESIRSIMELELNSREQRELDASKVYEAMGGYAPTLG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA+LG+I+ M +L + P +LG I + T+ G+ L+ P+ +++K +Q
Sbjct: 158 ILGAVLGLIQVMSHL-EDPSMLGPGIATAFVATIYGVALANLFYFPIANKLKGIVQEQSL 216
Query: 237 LYIIVKKALIAYMNGAIPQVAIE 259
L ++ + ++ G P+ AIE
Sbjct: 217 LREMMIEGIVGIAEGENPK-AIE 238
>gi|126698324|ref|YP_001087221.1| putative chemotaxis protein [Clostridium difficile 630]
gi|115249761|emb|CAJ67578.1| putative MotA/TolQ/ExbB proton channel [Clostridium difficile]
Length = 262
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 19/251 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T+I + I ++ F GG+ L ++V G +G + P V K S
Sbjct: 1 MTTLIFFIVGIASLVVAFVIDGGHVGALFVFSSALVVFGGTIGAVGASTPFPVFKKSIKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L F K ++ ++Y + +R E ID + EN+
Sbjct: 61 MLLAFKNK-----KPNNIENIIY--FKEIATKARKEGLLSIDKEIS-----------END 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL FI + +++ G + I N+++ +I I + G P +GI+G
Sbjct: 103 ELDPFIRKGLELMVDG-VDAVTIRNILESQIQITSKRHKEGIAIFDSSGGYAPTLGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS +P LG I V+ TL G+ + + P+ S++K+ ++ ++
Sbjct: 162 VMGLVHILGNLSSNPDALGPQISVAFLATLYGVGSANLIWLPIASKLKAINQQEISERLL 221
Query: 241 VKKALIAYMNG 251
V +A+++ + G
Sbjct: 222 VIEAILSILEG 232
>gi|225849648|ref|YP_002729882.1| chemotaxis protein PomA [Persephonella marina EX-H1]
gi|225646132|gb|ACO04318.1| chemotaxis protein PomA [Persephonella marina EX-H1]
Length = 253
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 35/235 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ L I+ A+GG+P + I+I G GL + + P+K
Sbjct: 3 ISTIIGIVAAFLLIVISI-AIGGSPLAFVNIPSILITVGGGLSATLTSFPMK-------- 53
Query: 61 LLEIF-GYKALGQDT---YCDVLKLLYILMYNLKKGSRN---ETENHIDDPYNSTIFTSI 113
++F G KA+ + D ++L L+ + ++ E++ID+ Y
Sbjct: 54 --DLFSGLKAITKAMNPGLPDPMELTDFLVDVANRARKDGILALESNIDEFYGRD----- 106
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
F + MRM+I G EI + D + I E +GE P
Sbjct: 107 ----------PFFGEIMRMLIDGQDIE-EIRSNADSSLMKIEQELSTEVAVWETLGELFP 155
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
A G++G ++G+I+ + NL+ P LG + V++ TL G IL+ + C P++ ++K
Sbjct: 156 AFGMIGTLIGLIQMLQNLND-PSALGPGMAVAMITTLYGAILANAFCVPVSKKLK 209
>gi|224172424|ref|XP_002339651.1| predicted protein [Populus trichocarpa]
gi|222831928|gb|EEE70405.1| predicted protein [Populus trichocarpa]
Length = 86
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I+ +IGG+ G L QP+E+VI+ GA LG F++ P K +K + +
Sbjct: 1 MLIIVGFLVVIISVIGGYLGAHGRLGALWQPYELVIIGGAALGAFLVGTPAKTVKQTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILM 86
++ +F Q Y DVL LLY L+
Sbjct: 61 MVGVFKGPRYKQQDYIDVLSLLYELL 86
>gi|308066933|ref|YP_003868538.1| chemotaxis motA protein (Motility protein A) [Paenibacillus
polymyxa E681]
gi|305856212|gb|ADM68000.1| Chemotaxis motA protein (Motility protein A) [Paenibacillus
polymyxa E681]
Length = 264
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ MRMII GN + + + +++ E+I+ S G P +G++GA++G+
Sbjct: 109 FMRGGMRMIIDGNDQEF-VRDVLMEDINATEDRHRSGALIFSQAGMYAPTLGVLGAVVGL 167
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I A+ +LS K L AI + TLLGI Y L +P+++++K K+ L +++ +
Sbjct: 168 IAALADLSDMEK-LSHAIAAAFIATLLGIFTGYVLWHPMSNKLKRLSKKEVELKLMMVEG 226
Query: 245 LIAYMNGAIPQVAI 258
L++ +G I +AI
Sbjct: 227 LLSIQSG-ISTIAI 239
>gi|307727323|ref|YP_003910536.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307587848|gb|ADN61245.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 254
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 29/242 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GGN LIQ VIV G L ++ N D GV LL
Sbjct: 5 TVFGVVFGVAAIVAGFSLEGGNFTSLIQLEAFVIVLGGTLAAVMIQNTWARFYD-GVKLL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
KA D K L IL L+ G + + + +F SI E +
Sbjct: 64 RFAFVKARQVDR-----KSLSIL---LEWGDQAKLNGML-------VFESI----EAKGI 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + +E+ + E+D YE+ + G P GI+GA
Sbjct: 105 SPFAKRGLELLANGVTTAV-LEDALQREVDA--YERNCMAAARIWQQAGGYAPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRL 237
+LG+I+ G++ + P LG I V+ TL G+ L+ + PL +I++ + L+ RL
Sbjct: 162 VLGLIQVTGHMLE-PSQLGQGIAVAFVATLYGLALANLVFLPLFGKIRAQVDSELRFRRL 220
Query: 238 YI 239
Y+
Sbjct: 221 YL 222
>gi|88704269|ref|ZP_01101983.1| chemotaxis motA protein [Congregibacter litoralis KT71]
gi|88701320|gb|EAQ98425.1| chemotaxis motA protein [Congregibacter litoralis KT71]
Length = 267
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 22/253 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++G+ + + I+GG + GG+ L+Q VIV G G ++ PL+ + + L
Sbjct: 26 TLLGVTLAVGAILGGNWLEGGHISALLQLTAFVIVIGGTFGAVLIQTPLRDFRGALGRLR 85
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ A ++ K + + G E +P N T
Sbjct: 86 WVLLPPAFDREAVLG--KTIEWSRIARRDGLLALEERVGKEPDNLT-------------- 129
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++V I +MD EID L + + MG P IGI+GA+L
Sbjct: 130 -----QKGLQLLVDGLEPEAIRTVMDVEIDNALAKDARAAKVYEAMGGYSPTIGIIGAVL 184
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG I V+ T+ G+ + L P+ +++++ Q + + +V
Sbjct: 185 GLIDVMNNLS-DPTQLGAGIAVAFVATIYGVGFANLLYLPIANKLRAVSGDQMQYHEMVV 243
Query: 243 KALIAYMNGAIPQ 255
+ +G PQ
Sbjct: 244 DGIAMIADGDNPQ 256
>gi|330808240|ref|YP_004352702.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376348|gb|AEA67698.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 246
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + + IIGG Y GG+ L +IV G +G ++ +P+ K
Sbjct: 5 SLIGIIMAFVAIIGGNYLEGGHLGALANGPAALIVLGGTIGAALLQSPMSAFK------- 57
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + +L++ L R + ID N ++ +L +
Sbjct: 58 -----------------RAMQVLIWILFP-PRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D E ++ MG P IG
Sbjct: 100 ADAEPDSYSRKGLQLLVDGAEPEAIRSIL--EVDFYTQESRDIEAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG+ I V+ T+ G+ + + P+ +++KS L+Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVASANLVLLPIAAKLKSIALRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + +++ G P+
Sbjct: 217 YREMLLEGILSIAEGENPR 235
>gi|52079918|ref|YP_078709.1| flagellar motor protein MotA [Bacillus licheniformis ATCC 14580]
gi|52785289|ref|YP_091118.1| flagellar motor protein MotA [Bacillus licheniformis ATCC 14580]
gi|319646265|ref|ZP_08000495.1| MotA protein [Bacillus sp. BT1B_CT2]
gi|52003129|gb|AAU23071.1| motility protein A [Bacillus licheniformis ATCC 14580]
gi|52347791|gb|AAU40425.1| MotA [Bacillus licheniformis ATCC 14580]
gi|317392015|gb|EFV72812.1| MotA protein [Bacillus sp. BT1B_CT2]
Length = 267
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-----SHMGESLPAIGIVG 179
F+ + M M + G + + I +++ EE+ E ++ H + + G P +G++G
Sbjct: 108 FLKNGMSMAVDGQSADF-IRDVLTEEV-----EAMEERHQVGAGIFTQAGTYAPTLGVLG 161
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++G+I A+ ++S + + LG AI + TLLGI Y L +P +++K ++ ++
Sbjct: 162 AVVGLIAALADMSDT-EALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKVRE 220
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++ + +++ + G P+V + + SER SI I
Sbjct: 221 VMIEGILSILEGQAPKVIEQKLLMYVSPSERSSIVI 256
>gi|289678954|ref|ZP_06499844.1| flagellar motor protein [Pseudomonas syringae pv. syringae FF5]
gi|330899453|gb|EGH30872.1| flagellar motor protein [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330976020|gb|EGH76086.1| flagellar motor protein [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 117/259 (45%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+
Sbjct: 5 SLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPM----------- 53
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + +K+++ +++ R + +D ++ +L +
Sbjct: 54 ----------NAFMRAMKIIHWIIFP----PRIDLPGGVDRVIGWSMTARKEGLLGLETV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D I E ++ MG P +G
Sbjct: 100 ADSEPDGYSRKGLQLLVDGAEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTVG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+ +Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAIAHRQAR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|90021804|ref|YP_527631.1| flagellar motor protein [Saccharophagus degradans 2-40]
gi|89951404|gb|ABD81419.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 28/257 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++G+ I ++GG + GGN L+ ++V G LG ++ P IK S
Sbjct: 5 SVVGVIIGFAALLGGNFLEGGNWTSLVNGPAALVVVGGTLGAAILQTPYSGIKRSLTLFK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
IF L + +K + +K EN + +S + +++ +E
Sbjct: 65 WIFKPPRL---HFKSGIKQVVSWAMAARKEGLLGLENIAEKEKDSFAKKGLQLLVDGSE- 120
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS---HMGESLPAIGIVG 179
D +R ++ E D+I+ E+ + + A+ MG P IGI+G
Sbjct: 121 ----TDVIRHVM---------------ETDLIVAEQ-RDHDAVQFYESMGGYAPTIGIIG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++G+I M NL+ P LG I ++ T+ G+ + P+ +++K+ +Q +
Sbjct: 161 AVMGLIHVMQNLA-DPAELGPGIAIAFVATIYGVAFANLFLLPVANKLKACIKQQSQFRE 219
Query: 240 IVKKALIAYMNGAIPQV 256
++ + +IA +G P+V
Sbjct: 220 LLVEGIIAIADGENPKV 236
>gi|260892161|ref|YP_003238258.1| MotA/TolQ/ExbB proton channel [Ammonifex degensii KC4]
gi|260864302|gb|ACX51408.1| MotA/TolQ/ExbB proton channel [Ammonifex degensii KC4]
Length = 265
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 115/258 (44%), Gaps = 30/258 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + I C++ GF GG L+ P +I+ G LG + I +
Sbjct: 3 IATLIGITVGIACLLLGFVLEGGTVAQLLAPSSFIIIFGGTLGATMAGFSFHEIAVVPKA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE----TENHIDDPYNSTIFTSIPTV 116
L IF ++ + + + L +L + +R E EN++ + + + I V
Sbjct: 63 LRVIFFHRPIDERALIEQL-------VSLAEKARREGLLYLENYLKEIESPFLRKGIQLV 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
++ E ++++M+ E+ + + G P +G
Sbjct: 116 VDGTEPEL------------------VKSIMETELYAMQERHRIAQEIFNQAGGYAPTMG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+G ++G+I + +LS SP+ LG AI ++ T TL G+ + + P+ +++K+ K+
Sbjct: 158 IIGTVMGLIHVLSHLS-SPEALGPAIAMAFTATLYGVSSANLIFYPIAARLKNLSAKEEL 216
Query: 237 LYIIVKKALIAYMNGAIP 254
+ I+ + L+A G P
Sbjct: 217 AHRIMLEGLLALQAGNNP 234
>gi|66046661|ref|YP_236502.1| flagellar motor protein [Pseudomonas syringae pv. syringae B728a]
gi|63257368|gb|AAY38464.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|330972461|gb|EGH72527.1| flagellar motor protein [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 246
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+
Sbjct: 5 SLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMS---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ +K+++ +++ R + +D ++ +L +
Sbjct: 55 -----------AFMRAMKIIHWIIFP----PRIDLPGGVDRVIGWSMTARKEGLLGLETV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D I E ++ MG P +G
Sbjct: 100 ADSEPDGYARKGLQLLVDGAEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTVG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+ +Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAIAHRQAR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|88812419|ref|ZP_01127669.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
gi|88790426|gb|EAR21543.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
Length = 254
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 130/282 (46%), Gaps = 35/282 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ-PFEIVIVAG---AGLGGFVMANPLKVIKD 56
++T+IG FI L +I +GG+P I + P ++++AG A L F + L K
Sbjct: 3 LATLIG-FIGALGVIAAAIFIGGSPAIFLNLPSMLIVLAGTLLAVLIKFPLGQFLGAFKA 61
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+G + F Y++ D L + +R E
Sbjct: 62 AGRA----FRYRSESPQGLIDQ-------TVELAQVARKEGL----------------LA 94
Query: 117 LENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ F +++I G+ S ++ ++ +EID+ + + +G+ PA+
Sbjct: 95 LEGYEVANPFFRQGIQLIADGH-ESELVKKVLGQEIDLTMARDEQGEQVFRAIGDVAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ + N++ PK +G A+ V+L TL G +L+ S+ P+ ++ + ++
Sbjct: 154 GMIGTLIGLVQMLSNMA-DPKQIGPAMAVALLTTLYGAVLANSVAIPIADKLANRNGEER 212
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
++ + L++ G P+V E + LP+ +R E A
Sbjct: 213 LNRTLILEGLLSIQEGLNPRVIGELLKTYLPVKQRAPAEEAA 254
>gi|220913722|ref|YP_002489031.1| MotA/TolQ/ExbB proton channel [Arthrobacter chlorophenolicus A6]
gi|219860600|gb|ACL40942.1| MotA/TolQ/ExbB proton channel [Arthrobacter chlorophenolicus A6]
Length = 276
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 32/273 (11%)
Query: 2 STIIGLFITILCIIGGFYAM----GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+TIIGLF+ G Y M G + L+ P +V+V GA L + N L+ + +
Sbjct: 4 ATIIGLFLAF----GSVYVMVTLEGAHVEALLLPAPMVLVFGATLAVGLAGNTLRDVIQA 59
Query: 58 GVSLLEIFGYK-ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
L F K A QD+ L+ + +R+E ++D + +
Sbjct: 60 FKDLPRAFVAKPAKPQDSIE--------LLVGYAEKARSEGLLALEDEAGTAKDPFVSRA 111
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L+N I + E+ LM++EID + + +G P IG
Sbjct: 112 LQN--------------IADGTDADELRTLMEDEIDTKMRRDRISSKFFASLGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+G ++ + + NLS +P LG I + TL G++ + L P +S++K +
Sbjct: 158 IIGTVVSLTHVLENLS-TPDHLGPMIATAFVATLWGLVSANFLWLPFSSRLKRLSDLEIE 216
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
++ + ++A NG P + E R ++P ++
Sbjct: 217 QMTLLMEGMLAVQNGTQPLLLAERLRAMVPANQ 249
>gi|330961245|gb|EGH61505.1| flagellar motor protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 246
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 30/257 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + IIGG + GG+ LI +IV G LG ++ +P+ + L
Sbjct: 5 SLIGLILAFVAIIGGNFLEGGHLGALINGPAALIVIGGTLGASLLQSPMSAFMRA----L 60
Query: 63 EIFGYKALGQ--DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+I G+ D V +++ M K+G + TV +
Sbjct: 61 KIVGWIIFPPRIDLPGGVDRVIGWSMTARKEG-----------------LLGLETV-ADA 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIGIV 178
E + +++++ G A I +++ E+D I E ++ MG P +GI+
Sbjct: 103 EPDGYARKGLQLLVDG-AEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTVGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+ +Q R
Sbjct: 160 GAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAIANLILLPVANKLKAIAHRQSRYR 218
Query: 239 IIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 219 EMLLEGLLSIAEGENPR 235
>gi|242280811|ref|YP_002992940.1| cyclic nucleotide-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242123705|gb|ACS81401.1| cyclic nucleotide-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 251
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 119/259 (45%), Gaps = 36/259 (13%)
Query: 10 TILCIIGGF------YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
T++ I+GGF MGGN I P IV+V G + P+ V+ + L+
Sbjct: 5 TLIGIVGGFGLIAATIVMGGNAAGFIDPPSIVVVFGGTFASCFIMFPMGVVLKAFKIALK 64
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
G+ A +D K++ + L + +R E+ ++ V ++E
Sbjct: 65 --GFFAKSEDP-----KIMIDQIVALAETARKES------------LVALEKVAIDDE-- 103
Query: 124 TFICDYMR--MIIVGNARSYE-IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
Y++ +I+V + + + ++M+ EID + + + MG PA G++G
Sbjct: 104 -----YLKKGVILVADGTDGDLVRSIMEFEIDAMKKRHFQGQAVMKGMGAMAPAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + NLS P +G A+ V+L TL G IL+ + PL +++ +++ I
Sbjct: 159 LIGLVQMLSNLSD-PDAIGPAMAVALLTTLYGSILANVIFLPLAKKLEERSIEEASYMEI 217
Query: 241 VKKALIAYMNGAIPQVAIE 259
+ + ++A G P + E
Sbjct: 218 MVEGVVAIQKGEHPSIVKE 236
>gi|118581871|ref|YP_903121.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118504581|gb|ABL01064.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
Length = 249
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 50/269 (18%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPL----KVIKD 56
++TIIGL + + GG G + LIQP +IV G G + PL K KD
Sbjct: 3 LATIIGLVMGFGAVFGGAVLEGLHLSALIQPTAALIVLGGTFGATFVCFPLSAIIKAFKD 62
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN-----ETENHI-DDPYNSTIF 110
++ L D ++ ++ K RN E E DP
Sbjct: 63 VKIAFLP----------ANVDHESVVKDIINYATKARRNGLISLEQEAQTAKDP------ 106
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH--- 167
F+ + +++ G E L E DI +E H++
Sbjct: 107 --------------FVKKGISLVVDGIDPQKLRETL---EADITAFED-HSKHSVEFYEA 148
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
G P IGI+GA+LG+I M NLS + K LG I V+ T+ G++++ +C P+ +++
Sbjct: 149 AGGFSPTIGIIGAVLGLIHVMSNLSDTSK-LGAGIAVAFVATIYGLMVANIICLPIGTKL 207
Query: 228 KSTRLKQHRL-YIIVKKALIAYMNGAIPQ 255
K R+K+ L +++ + LIA NG P
Sbjct: 208 K-IRMKEEVLRRVMILEGLIAIQNGENPH 235
>gi|218231425|ref|YP_002369308.1| flagellar motor protein MotA [Bacillus cereus B4264]
gi|218159382|gb|ACK59374.1| chemotaxis protein MotA [Bacillus cereus B4264]
Length = 264
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA++G+
Sbjct: 109 FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGL 167
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
+ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ RL I
Sbjct: 168 VAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLII-- 224
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 225 -DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|228960777|ref|ZP_04122415.1| hypothetical protein bthur0005_42340 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048217|ref|ZP_04193786.1| hypothetical protein bcere0027_41860 [Bacillus cereus AH676]
gi|229111974|ref|ZP_04241518.1| hypothetical protein bcere0018_42180 [Bacillus cereus Rock1-15]
gi|229147070|ref|ZP_04275430.1| hypothetical protein bcere0012_42080 [Bacillus cereus BDRD-ST24]
gi|228636458|gb|EEK92928.1| hypothetical protein bcere0012_42080 [Bacillus cereus BDRD-ST24]
gi|228671538|gb|EEL26838.1| hypothetical protein bcere0018_42180 [Bacillus cereus Rock1-15]
gi|228723204|gb|EEL74580.1| hypothetical protein bcere0027_41860 [Bacillus cereus AH676]
gi|228798912|gb|EEM45888.1| hypothetical protein bthur0005_42340 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 266
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA++G+
Sbjct: 111 FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGL 169
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
+ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ RL I
Sbjct: 170 VAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLII-- 226
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 227 -DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|74317268|ref|YP_315008.1| flagellar motor protein [Thiobacillus denitrificans ATCC 25259]
gi|74056763|gb|AAZ97203.1| chemotaxis transmembrane protein MotA [Thiobacillus denitrificans
ATCC 25259]
Length = 245
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S++IGL + I+GG GG+ + +QP ++IV G L ++ +PL V GV +
Sbjct: 4 SSLIGLALGGAAILGGQAIEGGHLGLFVQPAALLIVVGGTLAAVLLHHPLPVFL-RGVRM 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHID---DPYNSTIFTSIP 114
K C+ L+ ++ +R E+ E H++ DP+ T
Sbjct: 63 -----AKWAFHPPPCEASTLIRRIV-QWSHTARQESILALEKHLNLTHDPFQRTGL---- 112
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+++ A ++ +D +I + + G P
Sbjct: 113 -----------------QLLIDGADPVKLRETLDVQIVGFETAERQAARVWEVAGGYAPT 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+GI+GA++G+I M NLS P LG+ I V+ T+ G+ L+ L P+ ++IK T ++
Sbjct: 156 LGILGAVMGLIHVMENLS-DPGKLGSGIAVAFVATIYGVGLANLLFLPVANKIKFTIARR 214
Query: 235 HRLYIIVKKALIAYMNGAIPQV 256
IV LIA G P++
Sbjct: 215 VTEREIVCDGLIAIAQGDNPRI 236
>gi|206969904|ref|ZP_03230858.1| chemotaxis protein MotA [Bacillus cereus AH1134]
gi|206735592|gb|EDZ52760.1| chemotaxis protein MotA [Bacillus cereus AH1134]
Length = 264
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA++G+
Sbjct: 109 FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGL 167
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
+ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ RL I
Sbjct: 168 VAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLII-- 224
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 225 -DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|228923255|ref|ZP_04086545.1| hypothetical protein bthur0011_42350 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228954781|ref|ZP_04116802.1| hypothetical protein bthur0006_41490 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229081764|ref|ZP_04214257.1| hypothetical protein bcere0023_43930 [Bacillus cereus Rock4-2]
gi|229152705|ref|ZP_04280892.1| hypothetical protein bcere0011_42390 [Bacillus cereus m1550]
gi|229180777|ref|ZP_04308115.1| hypothetical protein bcere0005_41210 [Bacillus cereus 172560W]
gi|229192710|ref|ZP_04319669.1| hypothetical protein bcere0002_43610 [Bacillus cereus ATCC 10876]
gi|228590800|gb|EEK48660.1| hypothetical protein bcere0002_43610 [Bacillus cereus ATCC 10876]
gi|228602755|gb|EEK60238.1| hypothetical protein bcere0005_41210 [Bacillus cereus 172560W]
gi|228630768|gb|EEK87410.1| hypothetical protein bcere0011_42390 [Bacillus cereus m1550]
gi|228701609|gb|EEL54102.1| hypothetical protein bcere0023_43930 [Bacillus cereus Rock4-2]
gi|228804901|gb|EEM51499.1| hypothetical protein bthur0006_41490 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228836461|gb|EEM81812.1| hypothetical protein bthur0011_42350 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 266
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA++G+
Sbjct: 111 FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGL 169
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
+ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ RL I
Sbjct: 170 VAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLII-- 226
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 227 -DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|30022591|ref|NP_834222.1| flagellar motor protein MotA [Bacillus cereus ATCC 14579]
gi|229129796|ref|ZP_04258763.1| hypothetical protein bcere0015_42370 [Bacillus cereus BDRD-Cer4]
gi|29898149|gb|AAP11423.1| Chemotaxis motA protein [Bacillus cereus ATCC 14579]
gi|228653712|gb|EEL09583.1| hypothetical protein bcere0015_42370 [Bacillus cereus BDRD-Cer4]
Length = 266
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA++G+
Sbjct: 111 FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGL 169
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
+ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ RL I
Sbjct: 170 VAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLII-- 226
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 227 -DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|296504988|ref|YP_003666688.1| flagellar motor protein MotA [Bacillus thuringiensis BMB171]
gi|296326040|gb|ADH08968.1| flagellar motor protein MotA [Bacillus thuringiensis BMB171]
Length = 264
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA++G+
Sbjct: 109 FLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGL 167
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
+ A+GNL+ K LG AI + T+ GI Y L +P +++K S +++ RL I
Sbjct: 168 VAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLII-- 224
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 225 -DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|82702443|ref|YP_412009.1| flagellar motor protein [Nitrosospira multiformis ATCC 25196]
gi|82410508|gb|ABB74617.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
Length = 246
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 28/261 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIG+ I ++ + GG GG+ LIQ +V+V G LG ++ +P++ +
Sbjct: 4 NSIIGIGIALVAVFGGQVLEGGHHASLIQVTSLVVVLGGTLGAVLLQSPVRQFVLAMKMS 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH---IDDPYNSTIFTSIPTVLE 118
IF L + V++ + +K +NH IDDP+ + + V++
Sbjct: 64 RWIFVPPVLNPEA---VVQHIATWSAAARKEGLLALDNHVEGIDDPF---VRKGLQMVVD 117
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
E R++ V EIE D + ++ K + A G P IGI+
Sbjct: 118 GTEPKVL----QRVLEV------EIETFED-----LHHQGAKVWEA---AGGYAPTIGIL 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I+ M NLS +P LG I V+ T+ G+ L+ P+ +++K+ +Q L
Sbjct: 160 GAVMGLIQVMENLS-NPADLGAGIAVAFVATIYGVGLANLAFLPIANKLKTLIARQVLLR 218
Query: 239 IIVKKALIAYMNGAIPQVAIE 259
++ L+ G P++ E
Sbjct: 219 DMLVDGLVGIAKGENPRLIAE 239
>gi|77457795|ref|YP_347300.1| flagellar motor protein [Pseudomonas fluorescens Pf0-1]
gi|77381798|gb|ABA73311.1| putative chemotaxis protein [Pseudomonas fluorescens Pf0-1]
Length = 246
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + + IIGG Y GG+ L +IV G +G ++ +P+ K +
Sbjct: 5 SLIGIIMAFVAIIGGNYLEGGHLGALANGPAALIVLGGTIGAALLQSPMSAFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+++L + + R + ID N ++ +L +
Sbjct: 60 ----------------MQILAWIFFP----PRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D E ++ MG P IG
Sbjct: 100 ADAEPDAYSRKGLQLLVDGAEPEAIRSIL--EVDFYTQEARDVEAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG I V+ T+ G+ + + P+ +++KS L+Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLILLPVAAKLKSIALRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + +++ G P+
Sbjct: 217 YREMLLEGILSIAEGENPR 235
>gi|269796388|ref|YP_003315843.1| flagellar motor component [Sanguibacter keddieii DSM 10542]
gi|269098573|gb|ACZ23009.1| flagellar motor component [Sanguibacter keddieii DSM 10542]
Length = 253
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 34/277 (12%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDS--GV-S 60
++G+ I + I+ G +P ++ P +++V G G F ++ +KD+ G+ S
Sbjct: 1 MLGIGIALGSILAMIILEGASPMAVLLPAPMILVFG---GSFAVSLAGGTLKDALGGLKS 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTVL 117
L + F KA T D ++ + L ++ S + IDD + + S
Sbjct: 58 LPKAFVGKA---KTSADSIETIVSLADRARREGLLSLEDAARDIDDEFLRSGLRSAIDGT 114
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+ +L T + D + V + SY K +H MG P IGI
Sbjct: 115 DPEDLRTLLEDRIHSKRVSDKTSY------------------KFFH---DMGGYAPTIGI 153
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
VG ++ ++ + NLS +P LG I + TL GI+ + L P+ +++K +
Sbjct: 154 VGTVISLVHVLENLS-NPDELGHMIAAAFVATLWGILSANVLWLPIGNRLKRLSELECSQ 212
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
IV + L++ GA P++ E R +LPLSE+ E
Sbjct: 213 MEIVLEGLLSVQAGANPRLVGERLRSLLPLSEQQQSE 249
>gi|304405742|ref|ZP_07387400.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
gi|304344985|gb|EFM10821.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
Length = 267
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI--SHMGESLPAIGIVGAI 181
F+ + MRMII GN + + + L++ DI E A+ S G P +G++GA+
Sbjct: 108 AFLRNGMRMIIDGNDQDFVRDVLLE---DISATEDRHKSGALIFSQAGMYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ ++S K L AI + TLLGI Y L +P+++++K ++ + +++
Sbjct: 165 IGLIAALADMSDMEK-LSHAIAAAFIATLLGIFTGYVLWHPISNKLKRLSKRETEIRLMM 223
Query: 242 KKALIAYMNG 251
+ L++ G
Sbjct: 224 VEGLLSIQTG 233
>gi|71733294|ref|YP_275516.1| flagellar motor protein [Pseudomonas syringae pv. phaseolicola
1448A]
gi|257484888|ref|ZP_05638929.1| flagellar motor protein [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289627958|ref|ZP_06460912.1| flagellar motor protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647093|ref|ZP_06478436.1| flagellar motor protein [Pseudomonas syringae pv. aesculi str.
2250]
gi|298487808|ref|ZP_07005849.1| Flagellar motor rotation protein motA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71553847|gb|AAZ33058.1| chemotaxis protein MotA [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298157900|gb|EFH98979.1| Flagellar motor rotation protein motA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320325139|gb|EFW81208.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
B076]
gi|320329398|gb|EFW85391.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330866471|gb|EGH01180.1| flagellar motor protein [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330889034|gb|EGH21695.1| flagellar motor protein [Pseudomonas syringae pv. mori str. 301020]
gi|330986515|gb|EGH84618.1| flagellar motor protein [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331011089|gb|EGH91145.1| flagellar motor protein [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 246
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 118/260 (45%), Gaps = 36/260 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+
Sbjct: 5 SLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMS---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL----- 117
+ +K++ +++ R + +D ++ +L
Sbjct: 55 -----------AFMRAMKIIRWIIFP----PRIDLPGGVDRVIGWSMTARKEGLLGLETV 99
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAI 175
++E ++ +++++ G A I +++ E+D I E ++ MG P +
Sbjct: 100 ADSEPDSYARKGLQLLVDG-AEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTV 156
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GI+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K +Q
Sbjct: 157 GIIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKGIAHRQS 215
Query: 236 RLYIIVKKALIAYMNGAIPQ 255
R ++ + L++ G P+
Sbjct: 216 RYREMLLEGLLSIAEGENPR 235
>gi|255654792|ref|ZP_05400201.1| putative chemotaxis protein [Clostridium difficile QCD-23m63]
gi|296449537|ref|ZP_06891314.1| chemotaxis MotA protein [Clostridium difficile NAP08]
gi|296878140|ref|ZP_06902155.1| chemotaxis MotA protein [Clostridium difficile NAP07]
gi|296261601|gb|EFH08419.1| chemotaxis MotA protein [Clostridium difficile NAP08]
gi|296430893|gb|EFH16725.1| chemotaxis MotA protein [Clostridium difficile NAP07]
Length = 262
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 19/251 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T+I + I ++ F GG+ L ++V G +G + P V K S
Sbjct: 1 MTTLIFFIVGIASLVVAFVIDGGHVGALFVFSSALVVFGGTIGAVGASTPFPVFKKSIKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L F K ++ ++Y + +R E ID + +NN
Sbjct: 61 MLLAFKNK-----KPNNIENIIY--FKEIATKARKEGLLSIDKEIS-----------DNN 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL FI + +++ G + I ++++ +I I + G P +GI+G
Sbjct: 103 ELDPFIKKGLELMVDG-VDAVTIRSILESQIQITSKRHKEGIAIFDSAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS +P LG I V+ TL G+ + + P+ S++K+ ++ ++
Sbjct: 162 VMGLVHILGNLSSNPDALGPQISVAFLATLYGVGSANLIWLPIASKLKAINQQEISERLL 221
Query: 241 VKKALIAYMNG 251
V +A+++ + G
Sbjct: 222 VIEAILSILEG 232
>gi|126664985|ref|ZP_01735968.1| flagellar motor protein MotC [Marinobacter sp. ELB17]
gi|126630355|gb|EBA00970.1| flagellar motor protein MotC [Marinobacter sp. ELB17]
Length = 247
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 32/258 (12%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++G+ + + I+GG GG L +IV G L ++ V+K
Sbjct: 5 SLLGVILAFVAILGGNLLEGGALASLFNAPAALIVIGGTLAATILQTSWPVLK------- 57
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL----- 117
A Q + V + + E+ +D N ++ +L
Sbjct: 58 -----HAFSQSRWVFVPPFVSL-------------EDGLDKVVNWSVIARKKGLLGLEGL 99
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+E F+ + +++V A S I ++M+ E++ L MG P IGI
Sbjct: 100 AESEPERFVQKGL-LLLVDGAESNTIRSIMEVELETREQRDLDSARVFEAMGGYSPTIGI 158
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA++G+I+ M NL + P+ LG+ I + T+ G+ L+ L P+ ++++ ++ R
Sbjct: 159 IGAVMGLIQVMTNL-EDPESLGSGIATAFVATIYGVALANLLFFPVANKLRGLVRERTRY 217
Query: 238 YIIVKKALIAYMNGAIPQ 255
++ + LIA G P+
Sbjct: 218 EDMMIEGLIAIAEGENPK 235
>gi|283133059|dbj|BAI63826.1| flagellar motor protein MotC [Pseudomonas syringae pv. tabaci]
Length = 246
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 118/260 (45%), Gaps = 36/260 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+
Sbjct: 5 SLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMS---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL----- 117
+ +K++ +++ R + +D ++ +L
Sbjct: 55 -----------AFMRAMKIIRWIIFP----PRIDLPGGVDRVIGWSMTARKEGLLGLETV 99
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAI 175
++E ++ +++++ G A I +++ E+D I E ++ MG P +
Sbjct: 100 ADSEPVSYARKGLQLLVDG-AEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTV 156
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GI+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K +Q
Sbjct: 157 GIIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKGIAHRQS 215
Query: 236 RLYIIVKKALIAYMNGAIPQ 255
R ++ + L++ G P+
Sbjct: 216 RYREMLLEGLLSIAEGENPR 235
>gi|315649792|ref|ZP_07902875.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
gi|315274766|gb|EFU38147.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
Length = 264
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 36/261 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ I G+ + +IGGF GG+ L+Q +IV G + +++ P ++ +
Sbjct: 3 ITIIFGILAGLAALIGGFLWEGGHLSGLLQGAAALIVFGGTIAAVIVSFPATRLRTIPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L FG S +E IDD + ++ VL
Sbjct: 63 LKLAFGR-------------------------SERSSEKLIDDIVDMSVTARRDGVLALE 97
Query: 121 ELTT-----FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLP 173
++ F+ + M+M++ GN + L E+DI E+ +A G P
Sbjct: 98 RISADHEDPFLREGMQMVVDGNDPEMVRQIL---ELDINAAEQKHEGYAKIFESAGGYAP 154
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+GI+G ++G+I +G+L Q P LG +I V+ T TL G+ + + P+ S+IK+ +
Sbjct: 155 TMGIIGTVMGLIHVLGSL-QDPTNLGPSIAVAFTATLYGVASANIIFLPIASKIKARSEE 213
Query: 234 QHRLYIIVKKALIAYMNGAIP 254
+ ++ + ++A NG P
Sbjct: 214 EIANMELLLEGIMAVQNGEHP 234
>gi|303239755|ref|ZP_07326279.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
gi|302592692|gb|EFL62416.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
Length = 260
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 21/252 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+G+ + II G G N +L+ P +I+ + + P K I + G
Sbjct: 6 IVGIIVGFAAIIVGMIVKGANIEVLLNPAAAIIIIIGTIAATANSFPKKEILNVGKIAGV 65
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F K + +++K + L + +R E S+ +E E
Sbjct: 66 LFSDKH--KVDPGEIIKQI----LELSQMARREG------------LLSLEQTIEKTE-N 106
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ + M+I G Y I +++ EID + S G + P +G++GA++G
Sbjct: 107 QFMKRSLGMVIDGVEEEY-IREVLNVEIDSMEERHRAAASIFSTAGSAAPTLGVLGAVIG 165
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I A+GNL+ + K L I + TL GI + Y LC+P S++K ++ + I+ +
Sbjct: 166 LIGALGNLNDTEK-LAHMIAAAFVATLYGIFIGYVLCHPFASRLKRKSHEEIAILRIIAE 224
Query: 244 ALIAYMNGAIPQ 255
+++ G P+
Sbjct: 225 GVLSIQAGESPK 236
>gi|229591827|ref|YP_002873946.1| flagellar motor protein [Pseudomonas fluorescens SBW25]
gi|229363693|emb|CAY51067.1| putative chemotaxis protein [Pseudomonas fluorescens SBW25]
Length = 246
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + + IIGG Y GG+ L +IV G +G ++ +P+ K +
Sbjct: 5 SLIGIIMAFVAIIGGNYLEGGHLGALANGPAALIVIGGTVGAALLQSPMSSFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+++L +++ R + ID N ++ +L +
Sbjct: 60 ----------------MQILIWIIFP----PRVDLPGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D E + MG P IG
Sbjct: 100 ADAEPDSYARKGLQLLVDGAEPEAIRSIL--EVDFYTQESRDINAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG+ I V+ T+ G+ + + P+ S++KS ++Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVASANLVLLPVASKLKSIAMRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + +++ G P+
Sbjct: 217 YREMLLEGILSIAEGENPR 235
>gi|94500547|ref|ZP_01307078.1| flagellar motor protein [Oceanobacter sp. RED65]
gi|94427337|gb|EAT12316.1| flagellar motor protein [Oceanobacter sp. RED65]
Length = 252
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL I II +GG+P + ++IV G L +M L +G
Sbjct: 3 LATLVGL-IGCWVIIAVAMVLGGDPAMFFNVPSLLIVVGGALFAVLMKFELGQFLAAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D D + L +R N + LE
Sbjct: 62 AGKAFSFKLPKPDAMIDEI-------VELAGEARK----------NGLL------ALEGK 98
Query: 121 ELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
E++ F+ +++++ G+ ++ L+ +++ + + +G+ PA+G++G
Sbjct: 99 EVSYDFLAKGIQLLVDGHDPEV-VKTLLSKDMRLAADRHNTGSAIFTQIGDVGPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + N+ PK +G A+ V+L TL G +L+ L P+ + K ++ RL
Sbjct: 158 TLIGLVAMLANM-DDPKAIGPAMAVALLTTLYGAMLANMLALPIADKCKLRAAEEGRLQA 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+V AL+A G P+V R LP S+R
Sbjct: 217 MVLDALLAIQAGQNPRVIDSILRTYLPESKR 247
>gi|213024631|ref|ZP_03339078.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 104
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
LG I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +NG P +A
Sbjct: 7 LGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCVKITLLSNLNGYAPPIA 66
Query: 258 IEYGRKVLPLSERPSI 273
+E+GRK L SERPS
Sbjct: 67 VEFGRKTLYSSERPSF 82
>gi|15895121|ref|NP_348470.1| flagellar motor protein MotA [Clostridium acetobutylicum ATCC 824]
gi|15024822|gb|AAK79810.1|AE007693_8 Flagellar motor component MotA [Clostridium acetobutylicum ATCC
824]
gi|325509260|gb|ADZ20896.1| flagellar motor protein MotA [Clostridium acetobutylicum EA 2018]
Length = 259
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 33/258 (12%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG+ +L ++ G G N +L+ P +I+ G VM
Sbjct: 6 VIGIITGLLAVVVGMIVKGANVAVLLNPAAAIIII-VGTSAAVM---------------- 48
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE----- 118
+ ++ + ++ K+ LM K E N I D T + + LE
Sbjct: 49 ----NSFPKNEFTNIPKVFKSLMRGKSKEDPVEIINQIVDMAQETRKNGLLS-LEGKIHS 103
Query: 119 -NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+NE F+ + M++ G I +++ EI+ + G + P +G+
Sbjct: 104 IDNE---FLKTGLEMVVDG-VDPQHIAEVLEMEIESTEERHRGGALIFTTAGGAAPTLGV 159
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA++G+I A+GNL+ + K LG I + TL GI Y +C+P S++K L++ +
Sbjct: 160 LGAVVGLIGALGNLNDTEK-LGHMIAGAFVATLYGIFFGYVICHPFASRLKRKSLEEINV 218
Query: 238 YIIVKKALIAYMNGAIPQ 255
I+ + ++ +G P+
Sbjct: 219 MRIITEGILDIQSGNNPK 236
>gi|47091648|ref|ZP_00229444.1| chemotaxis protein MotA [Listeria monocytogenes str. 4b H7858]
gi|217965217|ref|YP_002350895.1| chemotaxis protein MotA (Motility protein A) [Listeria
monocytogenes HCC23]
gi|47019967|gb|EAL10704.1| chemotaxis protein MotA [Listeria monocytogenes str. 4b H7858]
gi|217334487|gb|ACK40281.1| chemotaxis protein MotA (Motility protein A) [Listeria
monocytogenes HCC23]
Length = 263
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIVGAILG 183
F+ MR+++ G + + ++++EE+ + E+ Y I + G P +G++GA +G
Sbjct: 88 FMKRGMRLVVDGQSSPEFLRDVLEEEV-ASMEERHAAYAKIFASAGAYAPTLGVLGAAMG 146
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I AMG +S +P L AI + T+ GI Y L P +++K K+ L ++ +
Sbjct: 147 LIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIE 205
Query: 244 ALIAYMNGAIPQVAIE 259
++A P+V E
Sbjct: 206 GVVALQERNAPRVVEE 221
>gi|257095367|ref|YP_003169008.1| flagellar motor protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257047891|gb|ACV37079.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 241
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 30/257 (11%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++GL I L I+GG GG+ L QP ++IV G LG ++ +P
Sbjct: 1 MLGLLIGFLAIVGGQLLEGGHVGSLSQPTALLIVVGGTLGAVMLQSPYATF--------- 51
Query: 64 IFGYKALGQDTYCDVLKLLYIL--MYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ G + + Y V+ L ++ + + + SR E +D + N
Sbjct: 52 VRGMRMVKWVWYPPVVNHLQLIQQVSSWSQVSRREGLLALD-------------AIVNEL 98
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI +++++ G A + +++ EI E G P IGI+GA+
Sbjct: 99 KDEFIRKGLQLLVDG-AEPERLREVLEVEISTFEEEMKLSARIWEAAGGYSPTIGILGAV 157
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS--TRLKQHRLYI 239
+G+I M NLS P LG I V+ T+ G+ L+ + P+ +++K+ RL R I
Sbjct: 158 MGLIHVMENLS-DPSKLGAGIAVAFVATIYGVGLANLVYLPMANKLKTHINRLVVQREMI 216
Query: 240 IVKKALIAYMNGAIPQV 256
+ L+ NG P++
Sbjct: 217 V--DGLVGIANGDNPRI 231
>gi|28869188|ref|NP_791807.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213967535|ref|ZP_03395683.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|301382872|ref|ZP_07231290.1| flagellar motor protein [Pseudomonas syringae pv. tomato Max13]
gi|302062802|ref|ZP_07254343.1| flagellar motor protein [Pseudomonas syringae pv. tomato K40]
gi|302131301|ref|ZP_07257291.1| flagellar motor protein [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28852428|gb|AAO55502.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213927836|gb|EEB61383.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|330876043|gb|EGH10192.1| flagellar motor protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|330964669|gb|EGH64929.1| flagellar motor protein [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|331016980|gb|EGH97036.1| flagellar motor protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 246
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+
Sbjct: 5 SLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMS---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ +K++ +++ R + +D ++ +L +
Sbjct: 55 -----------AFMRAMKIIRWIIFP----PRIDLPGGVDRVIGWSMTARKEGLLGLETV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D I E ++ MG P +G
Sbjct: 100 ADSEPDNYARKGLQLLVDGAEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTVG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K +Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKGIAHRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|251794147|ref|YP_003008878.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. JDR-2]
gi|247541773|gb|ACS98791.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. JDR-2]
Length = 265
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI--SHMGESLPAIGIVGAI 181
TF+ + MRMII GN + + + L++ DI E A+ + G P +G++GA+
Sbjct: 107 TFLRNGMRMIIDGNDQDFVRDVLLE---DISATEDRHKAGALIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+G++ + L +I + TLLGI Y L +PL +++K K+ +L +++
Sbjct: 164 VGLIGALGHMDDM-ETLAHSIAGAFIATLLGIFTGYVLWHPLANKLKRLSKKEVQLRLMM 222
Query: 242 KKALIAYMNG 251
+ L++ +G
Sbjct: 223 VEGLLSIQSG 232
>gi|169825895|ref|YP_001696053.1| chemotaxis protein motA [Lysinibacillus sphaericus C3-41]
gi|168990383|gb|ACA37923.1| Chemotaxis protein motA (Motility protein A) [Lysinibacillus
sphaericus C3-41]
Length = 248
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + + + I G Y I +++ EE++ + + G P +G++GA++G+
Sbjct: 89 FLKNGLTLAIDGQNADY-IRDVLTEEVEAMEERHASGSAIFTQAGTYAPTLGVLGAVVGL 147
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
I A+ +++ K LG AI + TLLGI Y L +P +++K + +KQ R+ I
Sbjct: 148 IAALADMNDIEK-LGHAISAAFMATLLGIFTGYVLWHPFANKLKRKSALEVKQKRMMI-- 204
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ +++ + G P+V + L + ER I
Sbjct: 205 -EGILSVLEGEAPRVIEQKLSSYLTMEERRQI 235
>gi|237799261|ref|ZP_04587722.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|237806230|ref|ZP_04592934.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022117|gb|EGI02174.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027344|gb|EGI07399.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 246
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+
Sbjct: 5 SLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMS---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ +K++ +++ R + +D ++ +L +
Sbjct: 55 -----------AFMRAMKIVRWIVFP----PRIDLPGGVDRVIGWSMTARKEGLLGLETV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D I E ++ MG P +G
Sbjct: 100 ADAEPDSYARKGLQLLVDGAEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTVG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K +Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAIANLILLPVANKLKGIAHRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + L++ G P+
Sbjct: 217 YREMLLEGLLSIAEGENPR 235
>gi|311696901|gb|ADP99774.1| flagellar motor protein PomA [marine bacterium HP15]
Length = 256
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 117 LENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE+ E+++ F+ ++M++ G I+ L+++E + L + M + PA+
Sbjct: 95 LEDREISSPFLGQGIQMLVDGQ-DGKTIKELLNKERLMTLDHNRSGAKVFTAMADVAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ + N+ + PK +G A+ V+L TL G +++ + P+ ++ ++
Sbjct: 154 GMIGTLIGLVQMLSNM-EDPKSIGPAMAVALLTTLYGAMIATMIATPIADKLSLRMTEEA 212
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
R+ + AL+A G P++ + LP ER +
Sbjct: 213 RMQSLYIDALVAIQEGTNPRIIEQMLSSYLPPKEREKV 250
>gi|322379331|ref|ZP_08053707.1| flagellar motor protein MotA [Helicobacter suis HS1]
gi|322380702|ref|ZP_08054841.1| flagellar motor protein MotA [Helicobacter suis HS5]
gi|321146870|gb|EFX41631.1| flagellar motor protein MotA [Helicobacter suis HS5]
gi|321148244|gb|EFX42768.1| flagellar motor protein MotA [Helicobacter suis HS1]
Length = 256
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 120/262 (45%), Gaps = 36/262 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S+++G+ + I I G GGNP ++ I+I+ L +++ + +K +
Sbjct: 3 LSSLLGVILAITAISVGDLLEGGNPIHVVHLSSIIIIVPTTLCAAMVSTHARYVKAAFKE 62
Query: 61 LLEIF-GYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVL 117
+ +F K Q+T ++++ + K G S + I+D + F+
Sbjct: 63 IKIVFLNPKVDLQETIRNIVEFSTMAR---KDGVLSLESKVSQIEDDFTRNGFS------ 113
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH----MGESLP 173
MI+ G +I+++ E +D+ + E + YH +H GES P
Sbjct: 114 --------------MIVDGK----DIKSVQ-ESLDVAIEELEEYYHGAAHYWITAGESAP 154
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
G+VGA+LG++ A+ L +P+ + I + T T+ GI SY+L P +++KS
Sbjct: 155 TFGLVGAVLGLMLALQKL-DNPQAMALGIAGAFTATVTGITCSYALFGPFGNKLKSKAKD 213
Query: 234 QHRLYIIVKKALIAYMNGAIPQ 255
+ +++ + ++ NG P+
Sbjct: 214 ILKEKVVILEGIVGIANGDNPR 235
>gi|329928777|ref|ZP_08282626.1| putative chemotaxis protein MotA [Paenibacillus sp. HGF5]
gi|328937558|gb|EGG33976.1| putative chemotaxis protein MotA [Paenibacillus sp. HGF5]
Length = 264
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 26/256 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ I+G+ + +IGGF GG+ L+Q +IV G + +++ P ++ +
Sbjct: 3 ITIILGILAGLAALIGGFLWEGGHLSGLLQGAAALIVFGGTIAAVIVSFPATRLRTIPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L FG D D + + + + +DP
Sbjct: 63 LKLAFGRSNRSSDELIDAIVDMSVTARRDGVLALERISAEHEDP---------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAIGIV 178
F+ + M+M++ GN + L E+DI E+ +A G P +GI+
Sbjct: 107 ----FLREGMQMVVDGNDPEMVRQIL---ELDINAAEQKHEGYAKIFESAGGYAPTMGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+I +G+L Q P LG +I V+ T TL G+ + + P+ S+IK+ ++
Sbjct: 160 GTVMGLIHVLGSL-QDPTGLGPSIAVAFTATLYGVASANIIFLPIASKIKARSEEEIVKM 218
Query: 239 IIVKKALIAYMNGAIP 254
++ + ++A NG P
Sbjct: 219 ELLLEGIMAVQNGEHP 234
>gi|253577344|ref|ZP_04854661.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843244|gb|EES71275.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
Length = 267
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI--SHMGESLPAIGIVGAIL 182
F+ MRMII GN + + +++++ E DI E+ A+ S G P +G++GA++
Sbjct: 109 FLRGGMRMIIDGNDQEF-VQDVLTE--DIAATEERHKAGALMFSQAGMYAPTLGVLGAVV 165
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I A+ ++S +IL AI + T+ GI Y L +P+ +++K K+ + +++
Sbjct: 166 GLIAALSDMSDM-EILAHAISGAFIATVFGIFTGYVLWHPIANKLKRLSKKEMEIRLMMV 224
Query: 243 KALIAYMNGAIPQVAIEYGRKV-LPLSERPSI 273
+ L++ +G + +AI+ V L +ER I
Sbjct: 225 EGLLSIQSG-VSTIAIQQKLAVFLTPAERAEI 255
>gi|331006558|ref|ZP_08329850.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
gi|330419627|gb|EGG94001.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
Length = 251
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
++M PA+G++G ++G++ + N+S PK +G A+ V+L TL G +L+ C+P+ +
Sbjct: 144 TNMASMAPAMGMIGTLIGLVAMLANMSD-PKSIGPAMAVALLTTLYGAVLANGFCDPIAA 202
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ L +V AL+A NG P+V R LP +R E
Sbjct: 203 KLTLKAKNDVLLKNLVIDALLAIQNGQNPRVIDSMLRNYLPEGKREIAE 251
>gi|301167894|emb|CBW27479.1| putative chemotaxis MotA protein [Bacteriovorax marinus SJ]
Length = 259
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMAN-PLKVIKD-SG 58
+++IIGL + I+G +GG+ I I +V G GL G P++VIK+
Sbjct: 5 IASIIGLVVATAAILGSIL-VGGDLGIFID-VPSTLVVGLGLIGVTFFKWPMEVIKNIVA 62
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET-----ENHIDDPYNSTIFTSI 113
++ F + +DT ++ NL + +R E+ + IDDP+
Sbjct: 63 FAMKGFFFSPSDPKDTIEEI--------GNLAETARRESVFALEKVPIDDPFLKK----- 109
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYE-IENLMDEEIDIILYEKLKPYHAISHMGESL 172
M + + R E I +++ EID ++ M +
Sbjct: 110 -----------------AMTLAADNRPPEVIASILQLEIDAMVERHKVGADVFQGMADDG 152
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK-STR 231
PA+G++G ++G+++ + NLS P +G A+ V+L T G I++ CNP+ ++I +
Sbjct: 153 PAMGMIGTLIGLVQMLQNLSD-PSAIGPAMAVALLTTFYGAIIANVFCNPMKNKIAFRSS 211
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L+ ++ II+ L + G P++ E LP ++R
Sbjct: 212 LEATKMNIIIAGTL-GIVAGENPRLIKEKLNAFLPPAQR 249
>gi|217077697|ref|YP_002335415.1| motility protein A [Thermosipho africanus TCF52B]
gi|217037552|gb|ACJ76074.1| motility protein A [Thermosipho africanus TCF52B]
Length = 262
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 32/279 (11%)
Query: 6 GLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF 65
G+ I ++ G + GG+ I IVIV G +G + ANP KD G +++I
Sbjct: 8 GIGIAFAMVVFGIVSGGGDFAAFINIPSIVIVIGGSIGAAIAANP----KDIGFKIVQI- 62
Query: 66 GYKALGQ--DTYCDVLKLLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTVLENN 120
+AL + Y ++LK L L ++ S E +DDP
Sbjct: 63 ALEALREPKTDYVNLLKTLVSLSEKARREGLLSLEENIEQLDDP---------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G ++++++ E+++ E +G PA G++G
Sbjct: 107 ----FMKKGLQLLVDGTEPEV-LKSMLEIEVEVASNEMNLKKGLFEAIGAYAPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + +L+ P LG ++ V+L TL G I++ ++ P+ +I + +
Sbjct: 162 LIGLIQMLKSLND-PNSLGPSMAVALITTLYGSIMANAMALPIAEKIAKRVISFEMEKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ + +++ G P++ E + LP + + E QE
Sbjct: 221 ILEGILSIQAGENPRILEEKLKSFLPDAVKAQYEAATQE 259
>gi|172058883|ref|YP_001815343.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sibiricum 255-15]
gi|171991404|gb|ACB62326.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sibiricum 255-15]
Length = 261
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 27/246 (10%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP---LKVIKDSGVSLLEIFGYKA 69
++GG G +P L+ P +VI+ +++ P LK+I +L ++ ++
Sbjct: 15 TLVGGMILKGASPIALLNPAALVIIFVGTAAAIMISFPKERLKIIP----ALFKVIFFEQ 70
Query: 70 LGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDY 129
+ + L + K+G S+ T LE + F+
Sbjct: 71 QLMTKQTLLQQFLTLSTQARKEG-----------------LLSLETALEEVD-NAFMRRG 112
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
+ M+I G Y +E++M +++ + + + G P +G++GA++G++ A+
Sbjct: 113 VMMVIDGQPSEY-VEDVMTRDLENMTERHHANANIFTQAGTYAPTLGVLGAVVGLVAALS 171
Query: 190 NLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
+LS K LG AI + TL GI Y L P +++K + +LY ++ + +++
Sbjct: 172 DLSDIEK-LGHAISGAFIATLFGIFTGYVLWFPFATKLKQKSATEIQLYEMMIEGILSIQ 230
Query: 250 NGAIPQ 255
NG P+
Sbjct: 231 NGESPK 236
>gi|261409602|ref|YP_003245843.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
gi|261286065|gb|ACX68036.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
Length = 264
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 26/256 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ I+G+ + +IGGF GG+ L+Q +IV G +++ P ++ +
Sbjct: 3 ITIILGILAGLAALIGGFLWEGGHLSGLLQGAAALIVFGGTFAAVIVSFPATRLRTIPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L FG D D + + + + +DP
Sbjct: 63 LKLAFGRSNRSTDELIDAIVDMSVTARRDGVLALERISAEHEDP---------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAIGIV 178
F+ + M+M++ GN + L E+DI E+ +A G P +GI+
Sbjct: 107 ----FLREGMQMVVDGNDPEMVRQIL---ELDINAAEQKHEGYAKIFESAGGYAPTMGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+I +G+L Q P LG +I V+ T TL G+ + + P+ S+IK+ ++
Sbjct: 160 GTVMGLIHVLGSL-QDPTGLGPSIAVAFTATLYGVASANIIFLPIASKIKARSEEEIVKM 218
Query: 239 IIVKKALIAYMNGAIP 254
++ + ++A NG P
Sbjct: 219 ELLLEGIMAVQNGEHP 234
>gi|254497490|ref|ZP_05110283.1| flagellar motor protein [Legionella drancourtii LLAP12]
gi|254353305|gb|EET12047.1| flagellar motor protein [Legionella drancourtii LLAP12]
Length = 258
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 30/236 (12%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T +GL + L I G GGN + L+ ++IV G LG ++ + L
Sbjct: 5 TFLGLVTSFLAIFVGQMIEGGNIHSLMNFSALLIVLGGTLGAVLVQTSRHTFVRAFKILP 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN----ETENHIDDPYNSTIFTSIPTVLE 118
IF L + C M+ L + +R ENH++
Sbjct: 65 WIFKPPQLDFEA-CRTR------MFELARKARQLGMLSLENHLE---------------- 101
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
E T + + ++++G + I +++ EID + L MG P IGI+
Sbjct: 102 -TEKTPLVNKGLELLVIGVDKQT-IRQVLEAEIDRVESHDLHAAQVFESMGGYSPTIGIL 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
GA+LG+I+ M +L++ P LG I V+ T+ G+ ++ + P+ +++K+ +Q
Sbjct: 160 GAVLGLIQVMRHLAE-PSELGVGIAVAFVATVYGVGMANLVFLPIANKLKACIARQ 214
>gi|94264077|ref|ZP_01287876.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93455493|gb|EAT05683.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 253
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
VLE +T M V + IE ++ +E+D+ L MG S PA
Sbjct: 94 VLEQQPITDPFLKKSIMYCVDGHEAEFIEEVLQKEVDLTLDRHRVGRKVFEGMGISAPAF 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ + +L P +G + V++ TL G +L+ L PL ++ ++
Sbjct: 154 GMIGTLVGLVQMLAHLD-DPAAIGPGMAVAMLTTLYGAVLANFLFIPLADKLSLRSEEEE 212
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
R ++ + ++ + G P+V E+ LP +R S
Sbjct: 213 RNRQLIIEGVLGILKGLNPRVMEEFLETFLPPKDRKS 249
>gi|312962249|ref|ZP_07776741.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
gi|311283586|gb|EFQ62175.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
Length = 246
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 34/259 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + + IIGG Y GG+ L +IV G +G ++ +P+ K +
Sbjct: 5 SLIGITMAFVAIIGGNYLEGGHLGALANGPAALIVIGGTVGAALLQSPMSSFKRA----- 59
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
++++ +++ R + ID N ++ +L +
Sbjct: 60 ----------------MQIMIWIIFP----PRVDLPGGIDRVVNWSLTARKEGLLGLEGV 99
Query: 123 TTFICD-YMR---MIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIG 176
D Y R ++V A I +++ E+D E + MG P IG
Sbjct: 100 ADAEPDSYSRKGLQLLVDGAEPEAIRSIL--EVDFYTQESRDINAAKVFESMGGYAPTIG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA++G+I MGNL+ P LG+ I V+ T+ G+ + + P+ S++KS ++Q R
Sbjct: 158 IIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVASANLVLLPVASKLKSIAMRQSR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ + +++ G P+
Sbjct: 217 YREMLLEGILSIAEGENPR 235
>gi|149375536|ref|ZP_01893306.1| flagellar motor protein PomA [Marinobacter algicola DG893]
gi|149360241|gb|EDM48695.1| flagellar motor protein PomA [Marinobacter algicola DG893]
Length = 258
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 27/256 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IGL IL I +G +P + I P I+IV G + V+ +
Sbjct: 4 ATLIGLVGAILLIASAVI-LGVSPDVFINPPSILIVVGGTM--LVVLAKFSFSQFFSAFK 60
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ +K DT + +L+ + K+G E + P
Sbjct: 61 VAARAFKFRLPDTRESIDELIEVANVARKQGVLGLEEREVGSP----------------- 103
Query: 122 LTTFICDYMRMIIVG-NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G NA + I++L+ +E + L + M + PA+G++G
Sbjct: 104 ---FLGQGIQMLVDGQNAET--IKHLLSKERLLTLDHNRSGAKVFTAMADVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+ + PK +G A+ V+L TL G +++ + P+ ++ ++ RL +
Sbjct: 159 LIGLVQMLSNM-EDPKSIGPAMAVALLTTLYGAMIATMIATPIADKLSLRMTEEARLQSL 217
Query: 241 VKKALIAYMNGAIPQV 256
AL+A G P++
Sbjct: 218 YIDALVAIKEGTNPRI 233
>gi|302875900|ref|YP_003844533.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|307689334|ref|ZP_07631780.1| flagellar motor protein MotA [Clostridium cellulovorans 743B]
gi|302578757|gb|ADL52769.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
Length = 265
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 112 SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA-----IS 166
++ +V+++ E F+ + M++ G IE E+ I E+++ H +
Sbjct: 96 ALESVVQSTE-NRFMRKGLEMVVDG------IEQDYIREVQTIEIEQMEERHRSGASIFT 148
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ 226
G + P +G++GA++G+I A+GNL+ + K LG I + TL GI Y +C+P S+
Sbjct: 149 TAGGAAPTLGVLGAVIGLIGALGNLNDTEK-LGHMIAAAFVATLYGIFFGYVICHPFASR 207
Query: 227 IKSTRLKQ-HRLYIIVK 242
+K ++ +YII++
Sbjct: 208 LKRKSHEEISSMYIILE 224
>gi|323703349|ref|ZP_08114999.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum nigrificans DSM
574]
gi|323531712|gb|EGB21601.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum nigrificans DSM
574]
Length = 259
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 52/267 (19%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPL-------KVIK 55
T G+ ++C++GGF GG P L+QP +IV G +G V+A K+IK
Sbjct: 5 TPAGILFAVICLVGGFILEGGEPQALLQPTAFMIVFGGTIGATVVAFSTSEVLSLPKLIK 64
Query: 56 DSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE-------TENHIDDPYNST 108
+ L F Q+T L+ +L + +R E + IDDP
Sbjct: 65 TAITKKLPDF------QETIN--------LIVDLAEKARREGLLYLDSQLDTIDDP---- 106
Query: 109 IFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK-PYHAISH 167
F+ M++++ G + ++++ EI YE+ + +
Sbjct: 107 ----------------FLRKAMQLVVDGTDPEM-VRSILETEI-YSAYERHQVGVNIFEA 148
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
G P +GI+G ++G++ + NLS P LG AI ++ TL G+ + P+ ++
Sbjct: 149 AGGYAPTMGIIGTVMGLVHVLANLS-DPDSLGPAIAMAFIATLYGVSSANIFWLPIGGKL 207
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIP 254
K+ K+ L ++ + ++A G P
Sbjct: 208 KNLSKKELLLREMMIEGILALQAGYNP 234
>gi|269836611|ref|YP_003318839.1| MotA/TolQ/ExbB proton channel [Sphaerobacter thermophilus DSM
20745]
gi|269785874|gb|ACZ38017.1| MotA/TolQ/ExbB proton channel [Sphaerobacter thermophilus DSM
20745]
Length = 268
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 24/266 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + + ++ F GG+ L+ +IV G G + ++ L K +
Sbjct: 3 LATIIGLILGVAALVVAFILEGGHLTSLLGITAFMIVFGGTFGATIASHSLDDAKR--IP 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + +KA + +L+ + + G + IDDP+ T
Sbjct: 61 SLILRAFKAPPDRRRMLIDELVTLAEVARRDGLLALEDRVIDDPFLQRAVT--------- 111
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++V +++ +I+ + + Y S MG P +GI+G
Sbjct: 112 ------------LVVDGTDPEVTRAVLESDIEAMEARHARGYGMFSTMGGFAPTMGIIGT 159
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NLS SP LG AI V+ TL G+ + + P+ +++K ++ I
Sbjct: 160 VMGLIHVLSNLS-SPDELGPAIAVAFLATLYGVASANLIWIPIGNKLKYRSQQEADERWI 218
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLP 266
V + ++ G P+V E LP
Sbjct: 219 VVEGVMGLQAGDNPRVLREKLTATLP 244
>gi|170693361|ref|ZP_02884521.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170141891|gb|EDT10059.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 254
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 29/242 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GG+ L+Q VIV G LG ++ N D GV LL
Sbjct: 5 TVFGVVFGVAAIVAGFSLEGGDFTSLLQLEAFVIVLGGTLGAVMIQNTWARFYD-GVKLL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
KA D + L +L L+ G + + + F SI + +
Sbjct: 64 RFAFVKARQVDR--ESLSVL------LEWGDQAKLNGML-------AFESI----DAKGI 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + +E+ + E+D YE+ + G P GI+GA
Sbjct: 105 SPFAKRGLELLANGVSTAV-LEDALQREVDA--YERNCMAAARIWQQAGGYAPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRL 237
+LG+I+ G++ + P LG I V+ TL G+ L+ + PL+ +I++ + L+ RL
Sbjct: 162 VLGLIQVTGHMLE-PSQLGKGIAVAFVATLYGLGLANLVFLPLSGKIRAQVDSELRFRRL 220
Query: 238 YI 239
Y+
Sbjct: 221 YL 222
>gi|152995177|ref|YP_001340012.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150836101|gb|ABR70077.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 251
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 120/257 (46%), Gaps = 27/257 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + + II + +GG+ + I +IV +M PL +G
Sbjct: 3 IATLIGLVGSFIVIIAAIF-VGGSAGMFIDTASTLIVLVGSTFVVLMQYPLSQFLSAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K++ DT D + Y L +KG LE
Sbjct: 62 AAKAFMFKSVPLDTLIDEI---YGLADEARKGGL--------------------LSLEGK 98
Query: 121 ELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
E++ F+ ++M++ G+ + ++N + ++++ Y G+ PA+G++G
Sbjct: 99 EVSHPFLSKGIQMLVDGHDGNV-VKNQLSKDMNQSYYRHSAGAKVFKAFGDVGPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + N+S PK +G A+ V+L TL G +L+ +C P+ +++ ++
Sbjct: 158 TLVGLVQMLANMSD-PKAIGPAMAVALLTTLYGAMLANMVCLPIQAKLNIRADEELTCQK 216
Query: 240 IVKKALIAYMNGAIPQV 256
++ AL+A +G P++
Sbjct: 217 LILDALLAIQSGQNPRI 233
>gi|150021175|ref|YP_001306529.1| MotA/TolQ/ExbB proton channel [Thermosipho melanesiensis BI429]
gi|149793696|gb|ABR31144.1| MotA/TolQ/ExbB proton channel [Thermosipho melanesiensis BI429]
Length = 262
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 34/281 (12%)
Query: 6 GLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF 65
G+ + + +I G + GG+ I IVIV G +G V ANP KD +++
Sbjct: 8 GVGLAFVMVIYGIISGGGDFAAFINIPSIVIVIGGSIGAAVAANP----KDIAFKFVQVT 63
Query: 66 GYKALGQDTYCDVLKLLYILMYNLKKGSRN------ETENHIDDPYNSTIFTSIPTVLEN 119
+AL ++ D + LL L+ +K R E +DDP
Sbjct: 64 -LEAL-KEPKTDYVNLLRTLVSLSEKARREGLLSLEENIEQLDDP--------------- 106
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +++++ G ++++M+ EI++ E +G PA G++G
Sbjct: 107 -----FMKKGLQLLVDGTEPEV-LKSMMEIEIEVASNEMNLKKGLFEAIGAYAPAFGMIG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+I+ + +L+ P LG ++ V+L TL G I++ + P+ ++ L
Sbjct: 161 TLIGLIQMLKSLN-DPNSLGPSMAVALITTLYGSIMANAFALPIAEKMGKRVLNTELEKN 219
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ + +++ G P++ E + LP + + E QE
Sbjct: 220 MILEGILSIQAGENPRILEEKLKAFLPQAAKAQYEASTQEA 260
>gi|326794295|ref|YP_004312115.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326545059|gb|ADZ90279.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 251
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 123/272 (45%), Gaps = 30/272 (11%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG F+ IL I +GG+ + + P I+IV +M PL +G +
Sbjct: 9 LIGSFVIILLAI----LLGGSAGMFVDPASILIVLIGSTFVTLMQYPLGQFLGAGKVAAK 64
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F +K++ D D E D+ + + LE E++
Sbjct: 65 AFMFKSVPLDALID------------------EVYGLADEARKGGLLS-----LEGKEVS 101
Query: 124 -TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ ++M++ G+ S ++ + +++++ +G+ PA+G++G ++
Sbjct: 102 HPFMSKGIQMLVDGHDGSV-VKGQLSKDMNMAFTRHDNGAKIFKALGDVGPAMGMIGTLV 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+++ + N+ PK +G A+ V+L TL G +L+ +C P+ +++++ ++ ++
Sbjct: 161 GLVQMLANMD-DPKAIGPAMAVALLTTLYGAMLANMVCLPIQAKLENRAKEELMCQQLIL 219
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
AL+A G P+V + +P S+R E
Sbjct: 220 DALLAIQAGQNPRVLDGSLKTFIPESKRTERE 251
>gi|304311122|ref|YP_003810720.1| Flagellar motor protein MotA [gamma proteobacterium HdN1]
gi|301796855|emb|CBL45067.1| Flagellar motor protein MotA [gamma proteobacterium HdN1]
Length = 246
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I ++M+ E+ L+ MG P IGI+GA++G+I MGNL+ P LG I
Sbjct: 124 IRSVMEVELFTRQERDLQSARVFEAMGGYSPTIGILGAVMGLIHVMGNLA-DPSKLGAGI 182
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T+ G+ L+ L PL +++K+ Q RL ++ + L+A +G P+
Sbjct: 183 ATAFVATIYGVGLANLLFLPLAAKLKAVIKTQTRLREMMIEGLLAIADGENPR 235
>gi|89093475|ref|ZP_01166423.1| flagellar motor protein [Oceanospirillum sp. MED92]
gi|89082165|gb|EAR61389.1| flagellar motor protein [Oceanospirillum sp. MED92]
Length = 252
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 124/277 (44%), Gaps = 31/277 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + ++ MGG+ + I P ++IV G L +M+ L +G
Sbjct: 3 IATLVGLLGSFGIVVAAMV-MGGDVGVFINPPSLLIVIGGSLFVVLMSYTLGQFLAAGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K+L + D++ L +KG E+
Sbjct: 62 AAKAFMFKSLNPE---DIIAETVDLADAARKGGLLSLEDK-------------------- 98
Query: 121 ELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
T D+M+ ++V ++ L+ +E + + +G+ PA+G+
Sbjct: 99 ---TVSSDFMQRGIQLLVDGHDPDVVKMLLKKESKLTHDRHEFGASIFASLGDVGPAMGM 155
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+++ + N+S PK +G A+ V+L TL G +L+ +C P++ ++K + ++
Sbjct: 156 IGTLVGLVQMLSNMSD-PKSIGPAMAVALLTTLYGAMLANMICIPISDKLKVRKDEEALN 214
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ L+A G P+V + R LP +R + E
Sbjct: 215 NDLIIDGLLAIQAGQNPRVIEQMLRNYLPEKKRAAAE 251
>gi|134300282|ref|YP_001113778.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum reducens MI-1]
gi|134052982|gb|ABO50953.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum reducens MI-1]
Length = 260
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 24/258 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T G+ +C+I GF GG+ L+ P +IV G LG V+A K + + L
Sbjct: 5 TPAGILFAAVCLISGFLLEGGHVSALLAPTAFIIVVGGTLGATVVAFSTKEVLSVPILLK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
K + + + L+ L + +R E ++D ++ +E+
Sbjct: 65 TAMTKKV---PDFSETINLI----VELAEKARREGLLYLDSQLDT---------IED--- 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK-PYHAISHMGESLPAIGIVGAI 181
F+ M++++ G + ++++ E+ YE+ + H G P +GI+G +
Sbjct: 106 -PFLRKAMQLVVDGTDPEM-VRSILETEV-YSAYERHQVGVHIFEGAGGYAPTMGIIGTV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ +GNLS P LG AI ++ TL G+ + P+ +++K+ K+ L ++
Sbjct: 163 MGLVHVLGNLSD-PDSLGPAIAMAFIATLYGVGSANVFWLPIGAKLKNLSKKELVLREMM 221
Query: 242 KKALIAYMNGAIPQVAIE 259
+ ++A G P + E
Sbjct: 222 IEGILALQAGYNPTIIRE 239
>gi|119474632|ref|ZP_01614985.1| Flagellar motor component [marine gamma proteobacterium HTCC2143]
gi|119450835|gb|EAW32068.1| Flagellar motor component [marine gamma proteobacterium HTCC2143]
Length = 252
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ F+ +++++ G+ ++ L+ ++ D + + + +G+ PA+
Sbjct: 95 LEGKEVGNDFLQGGIQLLVDGHDPDV-VKALLSKDKDKTVERHEQGASIFAALGDVAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+ PK +G A+ V+L TL G +L+ + P++ ++ R ++
Sbjct: 154 GMIGTLVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAMLANMVAIPISDKLILRRGEEE 212
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+V AL+A +G P+V R LP S+RP +
Sbjct: 213 MNKSLVIDALLAIQSGQNPRVIDSMLRNYLPASQRPQAD 251
>gi|71906383|ref|YP_283970.1| flagellar motor protein [Dechloromonas aromatica RCB]
gi|71846004|gb|AAZ45500.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
Length = 246
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++ G+ I + IIGG GG+ L+QP ++IV G LG ++ +P+ + + G+ +
Sbjct: 5 SLAGIAIGLFAIIGGQILEGGHVGSLVQPTALLIVLGGTLGAVLLQSPIHIFR-RGMKMA 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + + K L + N + SR E +++ IP + +
Sbjct: 64 KWVWVPPVIEQ------KRLIEQILNWSQLSRREGLLALEN--------YIPAIKDE--- 106
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F +++++ G A I L++ EI+ E + G P IGI+GA++
Sbjct: 107 --FARRGLQLLVDG-ADPERIRELLEVEINTFEDEWRQSAKIWEAAGGYSPTIGILGAVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+I M NLS P LG I V+ T+ G+ L+ + P+ +++K
Sbjct: 164 GLIHVMENLS-DPTKLGAGIAVAFVATIYGVGLANLVYLPIAAKLK 208
>gi|56475793|ref|YP_157382.1| flagellar motor protein [Aromatoleum aromaticum EbN1]
gi|56311836|emb|CAI06481.1| chemotaxis motA protein [Aromatoleum aromaticum EbN1]
Length = 246
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 38/234 (16%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + I I+ G GG+ L+QP +IV G LG ++ +PL V +D
Sbjct: 4 TSLIGITLGIAAILSGQVLEGGHISSLVQPTAFLIVVGGTLGAVMLQSPLPVFRDG---- 59
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT-----V 116
+ K +++ + NH D +T ++ I
Sbjct: 60 --------------MRMAKWVFV----------PPSSNHTDLIAQTTDWSHIARKEGLLA 95
Query: 117 LENNELT---TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
LE T F+ ++++I G + ++++ EID + G P
Sbjct: 96 LEERIETLPDPFVRKGLQLLIDG-VEPQHLRDVLEVEIDAWSAQMRLGAKIWEAAGGYAP 154
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
IGI+GA++G+I M NLS P LG+ I V+ T+ G+ + + P++ ++
Sbjct: 155 TIGILGAVMGLIHVMENLSD-PSRLGSGIAVAFAATIYGVAFANLIFLPISKKL 207
>gi|291613030|ref|YP_003523187.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583142|gb|ADE10800.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 249
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 42/263 (15%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++ GL + + IIGG GG+ +L+Q +IV G +G ++ +P+KV V+ +
Sbjct: 5 SLFGLVVAVTGIIGGQLLEGGSVNVLMQLAAFMIVFGGTIGAVMLQHPIKVF----VTGI 60
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN-----ETE-NHIDDPYNSTIFTSIPTV 116
++ G+ + + D KL Y + ++ E + +IDDP
Sbjct: 61 KLAGWVFV--TPHIDEQKLAYQITAWGSVARKDGILALEAQLKNIDDP------------ 106
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES----L 172
F+ +++++ GN+ + +I ++D ID+ YE L+ + A + + ES
Sbjct: 107 --------FVAKGLQLLVDGNS-AEKIREILD--IDLQSYETLR-WQA-ARVWESAAGYA 153
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P IGI+GA+LG++ M +L + P LG I V+ T+ G+ + + P+ ++K
Sbjct: 154 PTIGILGAVLGLVHVMQSLGE-PAKLGAGIAVAFIATIYGVGSANLVFLPIAGKLKIIIA 212
Query: 233 KQHRLYIIVKKALIAYMNGAIPQ 255
+Q L ++ L N P+
Sbjct: 213 RQVNLREMLIDGLCMVANAENPR 235
>gi|266623346|ref|ZP_06116281.1| chemotaxis protein PomA [Clostridium hathewayi DSM 13479]
gi|288864884|gb|EFC97182.1| chemotaxis protein PomA [Clostridium hathewayi DSM 13479]
Length = 283
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH-----MGESLPAIGIVGAILGIIK 186
+++V + S ++ +M+ E+D +L HA+ PA G++G ++G+I
Sbjct: 120 LLVVDSVDSEKVRQVMETELD-----QLDERHALDRGFYEKAASFAPAFGMIGTLVGLIL 174
Query: 187 AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
+GN+ Q L + +L TL G +L+ +C P+ S++K+ ++ +V + ++
Sbjct: 175 MLGNM-QDVNALAKGMATALITTLYGSLLANIVCLPVASKLKARHDEEFLCKQLVLEGVL 233
Query: 247 AYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
A +G P+ E K+LP S + + E +E
Sbjct: 234 AIQDGENPKFIEEKLYKLLPASRKKAEEDTEKE 266
>gi|91781367|ref|YP_556574.1| putative flagellar motor protein (MotA) [Burkholderia xenovorans
LB400]
gi|91694027|gb|ABE37224.1| putative flagellar motor protein (MotA) [Burkholderia xenovorans
LB400]
Length = 254
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 25/240 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
TI+G + I+ GF GG+ L Q VIV G LG ++ N D GV LL
Sbjct: 5 TILGAVFGLSAIVAGFSLEGGHFTSLFQLEAFVIVLGGTLGAVMIQNTWARFYD-GVKLL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
KA D + L +L L+ G + + + F SI + +
Sbjct: 64 RFAFVKARQVDR--ESLSVL------LEWGDQAKLNGML-------AFESI----DARGI 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F + ++ G + + +E+ + E+D ++ G P GI+GA+L
Sbjct: 105 NPFAKRGLELLANGVSTAV-LEDALQRELDAYERNRMAAARIWQQAGGYSPTFGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRLYI 239
G+I+ G++ + P LG I V+ TL G+ L+ + PL +I++ + L+ RLY+
Sbjct: 164 GLIQVTGHMLE-PSQLGQGISVAFVATLYGLALANLVFLPLHGKIRAQVDSELRFRRLYL 222
>gi|325981886|ref|YP_004294288.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325531405|gb|ADZ26126.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 252
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 26/258 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++ G+ + + IIGG + GG+ L+Q +IV G +G ++ +P+KV + GV
Sbjct: 9 VNSVAGIVLAFVAIIGGQFLEGGHVGSLLQVAAFLIVMGGTIGAVLLQSPVKVFVN-GVK 67
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ Y ++L + N SR E ++ + IP +
Sbjct: 68 MVSWVFYPPENSP------QILIKQVVNWSNISRKEGMLALE--------SYIPAAKD-- 111
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAIGIV 178
F ++++ G+ E L EIDI E + A G P IGI+
Sbjct: 112 ---AFSKKGLQLLADGSTPEKLREVL---EIDITALETHQRQSARIWEAAGGYAPTIGIL 165
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA+LG+I M NLS P +LG+ I V+ T+ G+ L+ + P+++++K+ + +
Sbjct: 166 GAVLGLIHVMENLS-DPSLLGSGIAVAFVATIYGVGLANLVFLPISNKLKNIIGEHVVMQ 224
Query: 239 IIVKKALIAYMNGAIPQV 256
++ +A NG P++
Sbjct: 225 EMLMDGFVAIANGENPRL 242
>gi|327481243|gb|AEA84553.1| flagellar motor protein [Pseudomonas stutzeri DSM 4166]
Length = 246
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 38/261 (14%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKV-IKDSGVSL 61
++IGL + + I+GG + GG+ L+ +IV G LG ++ P+ V ++ G++
Sbjct: 5 SLIGLLLAFVAIVGGNFLEGGHISALLNGPAALIVLGGTLGAVLLQTPIAVFMRAMGIAR 64
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKG-----SRNETENHIDDPYNSTIFTSIPTV 116
F + D +L + K+G ETE DPY
Sbjct: 65 WIFFPPRI---DLARGILMVTTWSNTARKEGLLGLEPVAETE---PDPYARKGLQ----- 113
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPA 174
++V A I +++ E+D+ E L+ MG P
Sbjct: 114 ----------------LLVDGAEPEVIRSIL--EVDLYTQESRDLRAAKVYESMGGYSPT 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
IGI+GA++G+I MGNL+ P LG+ I V+ T+ G+ + L P+ +++KS +Q
Sbjct: 156 IGIIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAFANLLVLPIGNKLKSVVQRQ 214
Query: 235 HRLYIIVKKALIAYMNGAIPQ 255
++ + +++ G P+
Sbjct: 215 TAYREMLLEGVLSIAEGENPR 235
>gi|330940675|gb|EGH43693.1| flagellar motor protein [Pseudomonas syringae pv. pisi str. 1704B]
Length = 194
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
++V A I +++ E+D I E ++ MG P +GI+GA++G+I MGN
Sbjct: 62 LLVDGAEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTVGIIGAVMGLIHVMGN 119
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
L+ P LG+ I V+ T+ G+ ++ + P+ +++K+ +Q R ++ + L++
Sbjct: 120 LA-DPSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAIAHRQARYREMLLEGLLSIAE 178
Query: 251 GAIPQ 255
G P+
Sbjct: 179 GENPR 183
>gi|294339808|emb|CAZ88171.1| Motility protein A [Thiomonas sp. 3As]
Length = 247
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 28/257 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
TI+G+ + + I+ G GG+ +IQ +IV G G ++ PLKV
Sbjct: 5 TIVGVVVALGSILLGQMLEGGHISSIIQGTAFLIVMGGTTGAVMLQFPLKV--------- 55
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI---DDPYNSTIFTSIPTVLEN 119
+ LK+L ++ KG ET I D ++ ++E+
Sbjct: 56 ------------FIRSLKMLPWMVLP-PKGDPQETIKQILEWSDTARKNGLLALEAMIES 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ ++M++ G +I + +++EI + + + G P +GI+G
Sbjct: 103 VP-DPFVKKGLQMLVDGT-DPEKIRSTLEQEIGAVEHHDTQAAKVYESSGGYSPTVGILG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A+LG+I M NL+ P LG I V+ T+ G+ + P+ +++KS + +L
Sbjct: 161 AVLGLIHVMENLA-DPSKLGGGIAVAFVATVYGVGAANLFFLPVANKLKSIVHNRAKLQE 219
Query: 240 IVKKALIAYMNGAIPQV 256
+ L+A G P++
Sbjct: 220 MQVDGLVAIAEGENPRI 236
>gi|292669790|ref|ZP_06603216.1| chemotaxis protein MotA [Selenomonas noxia ATCC 43541]
gi|292648587|gb|EFF66559.1| chemotaxis protein MotA [Selenomonas noxia ATCC 43541]
Length = 268
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F + M+I G + + +++D E+ I+ + + G P +G++GA++G+
Sbjct: 118 FFRTGLGMVIDGMDPDF-VGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGL 176
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
I A+GNL+ K LG +I + T+LGI Y L +P +++K + Q R+ I
Sbjct: 177 IAALGNLNDIDK-LGHSIAAAFVATILGIFTGYVLWHPFANKLKIMSEQEVSQKRMII-- 233
Query: 242 KKALIAYMNGAIPQVAIEYGRKV-LPLSERPSIE 274
+ +++ G P AIE V +P +ER +++
Sbjct: 234 -EGILSLQAGDSP-TAIEAKLMVFIPQTEREALK 265
>gi|315453528|ref|YP_004073798.1| putative flagellar motor proton channel MotA (pseudogene)
[Helicobacter felis ATCC 49179]
gi|315132580|emb|CBY83208.1| putative flagellar motor proton channel MotA (pseudogene)
[Helicobacter felis ATCC 49179]
Length = 256
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH----MGESLPAIGIVGA 180
F + MI+ G +I+++ D +++ + E + YH +H GES P G+VGA
Sbjct: 107 FTRNGFSMIVDGK----DIKSVQDS-LEVAIEELEEHYHGAAHYWITAGESAPTFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ A+ L +P+ + I + T T+ GI+ SY+L P +++K+ + I+
Sbjct: 162 VLGLMLALQKL-DNPQEMALGIAGAFTATVTGIMCSYALFGPFGNKLKNKSKDILKEKIL 220
Query: 241 VKKALIAYMNGAIPQ 255
+ + +I NG P+
Sbjct: 221 ILEGVIGIANGDNPR 235
>gi|71279290|ref|YP_268266.1| chemotaxis MotA protein [Colwellia psychrerythraea 34H]
gi|71145030|gb|AAZ25503.1| chemotaxis MotA protein [Colwellia psychrerythraea 34H]
Length = 248
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I GL I IL + GF GG+ L + +IV G LG VM V +SLL
Sbjct: 5 SIAGLTIAILAVYIGFSLDGGHLSALFELPAFIIVFGGTLGA-VMLQSSMVQFTHAISLL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENN 120
+ Y D + +++ +KG + +T I+D Y + +++
Sbjct: 64 KWVFYPP-KYDIEQGISEIVIWATKAREKGYLALEDTALEIEDSYTQ---KGLNLLVDGI 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL F ++ ++DI L+ + MG P IGI+GA
Sbjct: 120 ELENFRVA------------------LELDLDIYREHNLRSANVYEAMGGYSPTIGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I AM NL++ P +LG I + T+ G+ + P+ ++I++ +Q +
Sbjct: 162 VLGLIHAMSNLTE-PALLGQGIATAFIATIYGVGFANLFYLPIANKIRAIVHEQTMYREM 220
Query: 241 VKKALIAYMNGAIPQVAIE 259
+ + L++ +G P AIE
Sbjct: 221 ICEGLVSIAHGENPH-AIE 238
>gi|297569176|ref|YP_003690520.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
gi|296925091|gb|ADH85901.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
Length = 254
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
VLE +T M V + IE ++ +E+++ L + MG S PA
Sbjct: 94 VLEQQPITDPFLKKAIMYCVDGHEAEFIEEVLQKEVELTQARHLVGNQVFNGMGTSAPAF 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ--IKSTRLK 233
G++G ++G+++ M ++ P +G + V+L TL G +L+ L P+ + ++S +
Sbjct: 154 GMIGTLVGLVQ-MLSVMDDPAAIGPGMAVALLTTLYGAVLANFLFIPIADKLALRSQEEE 212
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
Q+R II + ++ + G P+V E+ LP +R
Sbjct: 213 QNRQLII--EGVLGILKGLNPRVMEEFLETFLPPKDR 247
>gi|254517029|ref|ZP_05129087.1| flagellar motor component [gamma proteobacterium NOR5-3]
gi|219674534|gb|EED30902.1| flagellar motor component [gamma proteobacterium NOR5-3]
Length = 251
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 117 LENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LEN E+ F+ + ++M+I GN+R + ++ +++ + S + PA+
Sbjct: 95 LENQEIDNDFLDEGVKMLIDGNSREV-VNTVLSKDMQQTIERHTWGAKVFSATADVAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ + N+S PK +G A+ V+L TL G +L+ + P+ ++ + +
Sbjct: 154 GMIGTLIGLVQMLSNMSD-PKSIGPAMAVALLTTLYGAMLANMIAMPIADKLTLRKADEL 212
Query: 236 RLYIIVKKALIAYMNGAIPQV 256
R+ + ++A G P++
Sbjct: 213 RVRSMCIDGVLAIQEGQNPRI 233
>gi|284041523|ref|YP_003391863.1| MotA/TolQ/ExbB proton channel [Conexibacter woesei DSM 14684]
gi|283945744|gb|ADB48488.1| MotA/TolQ/ExbB proton channel [Conexibacter woesei DSM 14684]
Length = 265
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
+ +++ EID ++ + G P +GI+GA++G+I +GNLS P LG AI
Sbjct: 124 VREILEAEIDGMVARHAIGANTFEKAGGYAPTLGILGAVMGLISVLGNLSD-PDSLGPAI 182
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+ TL G+ + + P+ S++K+ ++ L + ++A G P+V +
Sbjct: 183 SVAFIATLYGVGGANIVFLPICSRLKALSEEEVELRTLTLDGILAVQAGDNPRVVADKLS 242
Query: 263 KVLPLSERPSIE 274
+P SER + +
Sbjct: 243 SYVPPSERATAD 254
>gi|149376620|ref|ZP_01894380.1| flagellar motor protein MotC [Marinobacter algicola DG893]
gi|149359138|gb|EDM47602.1| flagellar motor protein MotC [Marinobacter algicola DG893]
Length = 245
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++V A + I ++M+ +++ L+ MG P IGI+GA++G+I+ M NL
Sbjct: 114 LLVDGAETETIRSIMEVDLESREQRDLESARVFEAMGGYSPTIGIIGAVMGLIQVMTNL- 172
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ P+ LG+ I + T+ G+ L+ L P+ ++++ ++ R ++ +IA +G
Sbjct: 173 EDPQSLGSGIATAFVATIYGVALANLLFFPVANKLRGILRERTRYEDMMIDGIIAIADGE 232
Query: 253 IPQ 255
P+
Sbjct: 233 NPK 235
>gi|299822261|ref|ZP_07054147.1| chemotaxis protein MotA [Listeria grayi DSM 20601]
gi|299815790|gb|EFI83028.1| chemotaxis protein MotA [Listeria grayi DSM 20601]
Length = 278
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 23/244 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K V
Sbjct: 3 ITTIIGLILAVIVIAGSFLIQHISLAMLFSAEALIVIILGTITSVLMAHPWNDVKR--VP 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + +VL+ +++ E +D+ IP
Sbjct: 61 QLFKVLFTTESGPSKIEVLRTFKEYADTIRRSGVLALEEEVDE---------IP------ 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIVG 179
F+ +R+++ G + S E EE + E+ + Y I + G P +G++G
Sbjct: 106 --DKFLRRGLRLVVDGQS-SPEFLRETMEEEVSSMEERHENYAKIFASAGSYAPTLGVLG 162
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK-STRLKQHRLY 238
A +G+I AMG +S +P L AI + T+ GI Y L NP ++++ +R + H+ Y
Sbjct: 163 AAMGLIHAMGQMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWNPFANKLRIKSRQEAHKRY 221
Query: 239 IIVK 242
+I++
Sbjct: 222 MIIE 225
>gi|238927471|ref|ZP_04659231.1| flagellar motor protein A [Selenomonas flueggei ATCC 43531]
gi|238884753|gb|EEQ48391.1| flagellar motor protein A [Selenomonas flueggei ATCC 43531]
Length = 263
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F + M+I G + + +++D E+ I+ + + G P +G++GA++G+
Sbjct: 113 FFRTGLGMVIDGMDPDF-VGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGL 171
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
I A+GNL+ K LG +I + T+LGI Y L +P +++K + Q R+ I
Sbjct: 172 IAALGNLNDIDK-LGHSIAAAFVATILGIFTGYVLWHPFANKLKIISEHEVSQKRMII-- 228
Query: 242 KKALIAYMNGAIPQVAIEYGRKV-LPLSERPSIE 274
+ +++ G P AIE V +P +ER +++
Sbjct: 229 -EGILSLQAGDSP-TAIEAKLMVFIPQTEREALK 260
>gi|328958205|ref|YP_004375591.1| flagellar motor protein MotA [Carnobacterium sp. 17-4]
gi|328674529|gb|AEB30575.1| flagellar motor protein MotA [Carnobacterium sp. 17-4]
Length = 268
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 24/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I L I +I GF GG+ LI VIV G LG ++A PL+ +K+ G
Sbjct: 1 MGVFIALVIGFGSMIIGFMGEGGHVSALISWTPAVIVFGGTLGSVLLAFPLEYVKNIG-K 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++++ + A +D L I++Y ++ + E + + +++
Sbjct: 60 IIKV-SFTAKSKD-------LTTIIVYFSTLATKVKREG---------VLSIESEAADSS 102
Query: 121 ELTTFICDYMRMIIVGNARSYE-IENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIV 178
++ FI +++++ G SYE I + ++ E+D I E+ K AI + G + P +GIV
Sbjct: 103 DVDPFIKKGIQLVVDG--ESYEMIRDTLELEMDAI-SERHKTGAAIFNSAGGTAPTMGIV 159
Query: 179 GAILGIIKAMGNLSQSP-KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
G +LG++ +G L+ + LG +I + TL G+ + + P+ +++K K+
Sbjct: 160 GTVLGLVHVLGGLADADMSQLGASISSAFLATLYGLASANLVFLPIGTRLKKIAQKEEME 219
Query: 238 YIIVKKALIAYMNGAIPQV 256
++ +A++ G P +
Sbjct: 220 KELILEAILMIQQGVRPNL 238
>gi|88704265|ref|ZP_01101979.1| Chemotaxis pomA protein [Congregibacter litoralis KT71]
gi|88701316|gb|EAQ98421.1| Chemotaxis pomA protein [Congregibacter litoralis KT71]
Length = 252
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 117 LENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LEN E+ F+ + ++M+I GN+R + ++ +++ + S + PA+
Sbjct: 95 LENQEIDNDFLDEGVKMLIDGNSREV-VSTVLSKDMQQTIERHSWGAKVFSATADVAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ + N+S PK +G A+ V+L TL G +L+ + P+ ++ + +
Sbjct: 154 GMIGTLIGLVQMLSNMSD-PKSIGPAMAVALLTTLYGAMLANMVAMPIADKLTLRKADEL 212
Query: 236 RLYIIVKKALIAYMNGAIPQV 256
R+ + ++A G P++
Sbjct: 213 RVRSMCIDGVLAIQEGQNPRI 233
>gi|121612656|ref|YP_001000047.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926432|ref|ZP_01810115.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8486]
gi|167005003|ref|ZP_02270761.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
81-176]
gi|87250461|gb|EAQ73419.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|145844595|gb|EDK21701.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8486]
Length = 258
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 44/266 (16%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG-----SR-NETENHIDDPYNSTIFTSIP 114
L +F K G + + +L+ + + G SR NE EN
Sbjct: 63 LKVVF--KGSGVNLPERIAQLIEFAIIARRDGLLALESRTNEIENE-------------- 106
Query: 115 TVLENNELTTFICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
F+ + M M++ G + S EI+ EE Y++ Y + G
Sbjct: 107 ----------FLKNAMMMLVDGKSFEEIHESMEIQTEQLEE----HYKECAEYWIV--FG 150
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
E+ P +G+VGA+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+
Sbjct: 151 ETCPTMGLVGAVFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKA 209
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ + I++ +A+ GA P+
Sbjct: 210 NGMDLVKEQIVITEAIKGIAEGANPR 235
>gi|120553255|ref|YP_957606.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120323104|gb|ABM17419.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 258
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 111/255 (43%), Gaps = 25/255 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IGL IL I +G +P + I P ++IV G L + L D+
Sbjct: 4 ATLIGLVGAILLISSAII-LGASPGMFINPPSLLIVIGGTLLVVLAKFSLAQFFDAFKVA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F +K +T + +L+ I K+G + P
Sbjct: 63 ARAFKFKL--PETQASIEELVEIANIARKEGVLGIEGREVSSP----------------- 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G I+ L+++E + L + M + PA+G++G +
Sbjct: 104 ---FLGQGIQMLVDGQ-DGNTIKQLLNKERLMTLEHNRSGAKVFTAMADVAPAMGMIGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ + N+ + PK +G A+ V+L TL G +++ + P+ ++ ++ R+ +
Sbjct: 160 IGLVQMLSNM-EDPKSIGPAMAVALLTTLYGAMIATMIATPIADKLSLRMTEEARMQSLY 218
Query: 242 KKALIAYMNGAIPQV 256
AL+A G P++
Sbjct: 219 IDALVAIQEGTNPRI 233
>gi|289523563|ref|ZP_06440417.1| chemotaxis protein PomA [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503255|gb|EFD24419.1| chemotaxis protein PomA [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 245
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 115/270 (42%), Gaps = 41/270 (15%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+ GG A GG+ I ++IV G LGG +++NP K + G L + F
Sbjct: 2 VAGGIVA-GGDTGAFINLPSLLIVVGGALGGTILSNPWKRVLSLGQILKKAF-------- 52
Query: 74 TYCDVLKLLYIL--MYNLKKGSRNE-------TENHIDDPYNSTIFTSIPTVLENNELTT 124
+ + +L+ I+ M + + +R E +DDP
Sbjct: 53 -FSESPELISIVQTMVSFAEKARREGLLSLEDDAEQLDDP-------------------- 91
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ +++++ G +++++D EI ++ E PA G++G ++G+
Sbjct: 92 FMRKSIQLVVDGTDPEL-VKSILDTEIGLLEERHAGNKFMFDTFAELAPAFGMLGTLIGL 150
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I+ +GNL+ P LG + V+L T G +++ P+ ++ ++ +V +
Sbjct: 151 IQMLGNLN-DPDALGPGMAVALITTFYGSMMANIFGIPIARKLTVRTQEEVMTREMVVEG 209
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++A G P++ E + LP R + E
Sbjct: 210 ILAIQAGENPRLVEERLKVFLPPKFREAFE 239
>gi|153952523|ref|YP_001398612.1| flagellar motor protein MotA [Campylobacter jejuni subsp. doylei
269.97]
gi|152939969|gb|ABS44710.1| putative chemotaxis protein MotA [Campylobacter jejuni subsp.
doylei 269.97]
Length = 258
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 44/266 (16%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG-----SR-NETENHIDDPYNSTIFTSIP 114
L +F K G + + +L+ + + G SR NE EN
Sbjct: 63 LKVVF--KGSGVNLPERIAQLIEFAIIARRDGLLALESRTNEIENE-------------- 106
Query: 115 TVLENNELTTFICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
F+ + M M++ G + S EI+ EE Y++ Y + G
Sbjct: 107 ----------FLKNAMMMLVDGKSFEEIHESMEIQTEQLEE----HYKECAEYWIV--FG 150
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
E+ P +G+VGA+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+
Sbjct: 151 ETCPTMGLVGAVFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKA 209
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ + I++ +A+ GA P+
Sbjct: 210 NGMDLVKEQIVITEAIKGIAEGANPR 235
>gi|218887299|ref|YP_002436620.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758253|gb|ACL09152.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 252
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 122/272 (44%), Gaps = 27/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ I+ +IG +MGGNP + ++IV G LG ++ PL V
Sbjct: 3 LATVLGILIS-FGLIGTALSMGGNPLFFVDSAALLIVLGGTLGAALVHYPLPVALRVLSI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
+ F + D D + + ++G S ++DDP+ + + ++
Sbjct: 62 TRKAFATRLHRIDLVID--QFMEFAHRARREGLLSLEPAVRNLDDPF---LRKGLQLTID 116
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
E D +R I+ + E + M +I + L Y PA+G+V
Sbjct: 117 GLE-----PDAIREIMESEIAALETRHSMGVDI----FNALASYA---------PALGLV 158
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+++ + +++ P +G A+ V+L T G++L+ + PL +++ ++ +L
Sbjct: 159 GTLIGLVQMLRSMND-PSAIGPAMAVALITTFYGVVLANLVFLPLAGKLRHRSKEEVQLM 217
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A G P++ +E P ER
Sbjct: 218 EMQLEGILAIARGENPRIILEKLSCYQPPRER 249
>gi|311695187|gb|ADP98060.1| chemotaxis protein MotA [marine bacterium HP15]
Length = 248
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++V A + I +M+ +++ L+ MG P IGI+GA++G+I+ M NL
Sbjct: 116 LLVDGAETETIRGIMEVDLESREQRDLESAKVFEAMGGYSPTIGIIGAVMGLIQVMTNL- 174
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ P+ LG+ I + T+ G+ L+ L P+ ++++ ++ R ++ LIA G
Sbjct: 175 EDPQSLGSGIATAFVATIYGVALANLLFFPVANKMRGIVRERTRYEDMMIDGLIAIAEGE 234
Query: 253 IPQ 255
P+
Sbjct: 235 NPK 237
>gi|57168475|ref|ZP_00367609.1| probable flagellar motor proton channel Cj0337c [Campylobacter coli
RM2228]
gi|305432894|ref|ZP_07402052.1| flagellar motor protein A [Campylobacter coli JV20]
gi|57020283|gb|EAL56957.1| probable flagellar motor proton channel Cj0337c [Campylobacter coli
RM2228]
gi|304444048|gb|EFM36703.1| flagellar motor protein A [Campylobacter coli JV20]
Length = 258
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 44/266 (16%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG-----SR-NETENHIDDPYNSTIFTSIP 114
L +F K G + + +L+ + + G SR NE EN
Sbjct: 63 LKIVF--KGSGVNLPERIAQLIEFAIIARRDGLLALESRTNEIENE-------------- 106
Query: 115 TVLENNELTTFICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
F+ + M M++ G + S EI+ EE Y++ Y I G
Sbjct: 107 ----------FLRNAMMMLVDGKSFEEIHESMEIQTEQLEE----HYKECAEYWII--FG 150
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
E+ P +G+VGA+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+
Sbjct: 151 ETCPTMGLVGAVFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKA 209
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ + I++ +A+ GA P+
Sbjct: 210 NGMDLVKEQIVITEAIKGIAEGANPR 235
>gi|253702422|ref|YP_003023611.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M21]
gi|251777272|gb|ACT19853.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M21]
Length = 254
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 28/258 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ + I + GG G + LIQP +IV G ++ PL + +
Sbjct: 3 LSTIIGILLGIGAVFGGAALEGLHMSALIQPTAAIIVLGGTAAATFVSYPLPTLLTAVKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F +D + ++ + G S + + D + +
Sbjct: 63 LRKVF--IPPNEDPEGVIKNIINYAAKARRNGLISLEQEAQTVKDSFTKKGIS------- 113
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++V ++ M+ E+ G P IGI+
Sbjct: 114 --------------LVVDGIDPQKLRETMEIELGSFEAHAKGSAEVFESAGGFAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA+LG+I M NLS P LG I V+ T+ G++++ C P +++K RLK+ L
Sbjct: 160 GAVLGLIHVMSNLS-DPSKLGGGIAVAFVATIYGLMVANIFCIPFGTKLKH-RLKEELLQ 217
Query: 239 I-IVKKALIAYMNGAIPQ 255
+V + LIA NG P
Sbjct: 218 KEMVIEGLIAIQNGENPH 235
>gi|256833231|ref|YP_003161958.1| MotA/TolQ/ExbB proton channel [Jonesia denitrificans DSM 20603]
gi|256686762|gb|ACV09655.1| MotA/TolQ/ExbB proton channel [Jonesia denitrificans DSM 20603]
Length = 261
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 32/284 (11%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVA----GAGLGGFVMANPLKVIKDS 57
+++IGL I II G +P + P +V+V G + G + + + +K
Sbjct: 4 ASLIGLAIGFGAIIMAILLEGASPMSVFLPAPMVLVFLATFGVAMAGGTLRDTIYALKQL 63
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+ A DT + +L + +R E ++D +
Sbjct: 64 PAAFTRKPSNAAASVDT-----------IVSLAEQARREGLLALEDAAKD---------I 103
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
EN+ F+ D +R I G ++ ++++++I E Y MG P IGI
Sbjct: 104 END----FLRDGLRSAIDGT-DPEDLRDILEDKIAAKRAEDKVGYKFYDDMGGYAPTIGI 158
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS-TRLKQHR 236
VG ++ ++ + NL+ P LG I + T GI + + P+ S++K + L+
Sbjct: 159 VGTVVSLVHVLENLAD-PSELGHMIAAAFLATFWGIFTANVMWLPIGSRLKRISNLECDE 217
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ II+ + L+A G+ P++ E R ++P + P VA+E
Sbjct: 218 MEIIL-EGLLAVQAGSNPRLVGERLRSLIPSTSAPPAPKVAKEA 260
>gi|83589633|ref|YP_429642.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
gi|83572547|gb|ABC19099.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
Length = 272
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 116/277 (41%), Gaps = 43/277 (15%)
Query: 8 FITILCIIGGF------YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
F+T+L I+ G MGGNP + +++ G ++ + IK+ ++
Sbjct: 6 FMTVLGIVAGIGLMVGALIMGGNPKLFWSVPSLMVTVGGSFAAVLINFSFQDIKNVFGTV 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE-------TENHIDDPYNSTIFTSIP 114
+ F + + +V L + +R E N ++DP+ + +
Sbjct: 66 KQAFTTDLMDPEELIEVFG-------ELARKARREGLLALEDDANRLEDPFFAKGIQMMV 118
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+E + + M + AR +EI Y G P+
Sbjct: 119 DAMEPQMIREILETDMAYM----ARRHEI-----------------GYGIFKTWGNLAPS 157
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G++G ++G+++ + L + P+ LG ++ ++L T G I++Y + PL ++ ++
Sbjct: 158 FGLIGTLIGLVQMLAKLDK-PETLGPSMALALITTFYGAIMAYMIFIPLAGKLSLRSEQE 216
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVL-PLSER 270
L+ ++ + +IA +G P++ E+ R L P+S R
Sbjct: 217 MMLHQMMLEGIIAIQSGVNPRILEEHLRSFLAPVSNR 253
>gi|326792988|ref|YP_004310809.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
gi|326543752|gb|ADZ85611.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
Length = 264
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 20/273 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S I+ L + + GF GG+ L +IV G +G ++ P++ IK
Sbjct: 3 LSIIVFLVFSFGALFLGFILEGGHLLALFIGTAAIIVFGGTIGAVGLSFPMEEIKRLPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F YK + D Y + Y L +R E ++D N
Sbjct: 63 IGVLFNYKPI--DNYKITKQF-----YELTTIARAEGILALEDAAG-----------RNG 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
I +R+I+ G ++ ++L+ + +I + + G P +GI+G
Sbjct: 105 IKHPLITKGLRLIVDGVDTNHIYKSLVTDAENIDARHE-AGFAIFESAGGYSPTMGIIGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS P LG I V+ TL G+ + L P+ +++K+ K+ +
Sbjct: 164 VMGLVHVLGNLSD-PSTLGPKIAVAFIATLYGVGTANLLWLPIATRLKNISEKESLSNQM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V AL+A G P++ I+ L ER +
Sbjct: 223 VINALVALQQGKHPKLVIDDMSAFLTQEEREKV 255
>gi|311992348|gb|ADQ26747.1| MotA-1 [Aeromonas hydrophila]
Length = 251
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + ++ I+GG GG+P L+ +IV G +G + P V+ S L
Sbjct: 1 SLIGLVLALIAILGGNMIEGGHPSALLDLPAFLIVIGGTIGAALTQFPFSVVG----STL 56
Query: 63 EIFGY--KALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + L D +LL L N ++ E ID+ +
Sbjct: 57 KRFKWLLAPLKLDMQQQA-ELLENLAGNARRSGMLALEGMIDEIKDP------------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDI---ILYEKLKPYHAISHMGESLPAIGI 177
F+ ++M++ G ++ +I +++ EI+ L + +K Y A MG P +GI
Sbjct: 103 ----FLQKGVQMMVDGYEKT-KIHEVLENEIEFEQEDLEQTVKFYEA---MGGYCPTMGI 154
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
VGA+ G+I AMG L +P LG AI V+ T+ G+ + + P ++ K
Sbjct: 155 VGAVFGLIHAMG-LLDAPDKLGGAIAVAFIATIYGVSAANLIFLPFGNRYKG 205
>gi|237653595|ref|YP_002889909.1| flagellar motor protein [Thauera sp. MZ1T]
gi|237624842|gb|ACR01532.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
Length = 246
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 46/266 (17%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++GL + I I+ G GG+ L QP +IV G LG ++ +PL+V
Sbjct: 5 SLVGLTLGIAAILVGQVIEGGHLSSLFQPTAFMIVIGGTLGAVMLQSPLRVFMQGMRMAR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHID---DPYNSTIFTSIPT 115
+F A DT + + N + +R E EN I+ DP+ +
Sbjct: 65 WVFVPPAPAFDTIIEQVA-------NWGQTARKEGLLSLENQIEALSDPFMRKGLQLLVD 117
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLP 173
+E N L + E++I ++E A G P
Sbjct: 118 GIEPNRLREVL-----------------------EVEIGVWENQMKMSARIWEAAGGYAP 154
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---T 230
IGI+GA++G+I M NLS P LG I V+ T+ G+ + + P+ ++ + T
Sbjct: 155 TIGILGAVMGLIHVMENLS-DPSRLGAGIAVAFVATIYGVGFANLVFLPIAKKLGAHIVT 213
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQV 256
Q +++ L+ NG P++
Sbjct: 214 LTTQREMFV---DGLVGIANGDNPRI 236
>gi|86151159|ref|ZP_01069374.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153687|ref|ZP_01071890.1| chemotaxis protein motA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157414634|ref|YP_001481890.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
81116]
gi|283955762|ref|ZP_06373253.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni 1336]
gi|315123902|ref|YP_004065906.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841506|gb|EAQ58753.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85842648|gb|EAQ59860.1| chemotaxis protein motA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157385598|gb|ABV51913.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni 81116]
gi|283792717|gb|EFC31495.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni 1336]
gi|307747274|gb|ADN90544.1| Chemotaxis protein motA [Campylobacter jejuni subsp. jejuni M1]
gi|315017624|gb|ADT65717.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315931585|gb|EFV10551.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 258
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 44/266 (16%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP ++ +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG-----SR-NETENHIDDPYNSTIFTSIP 114
L +F K G + + +L+ + + G SR NE EN
Sbjct: 63 LKVVF--KGSGVNLPERIAQLIEFAIIARRDGLLALESRTNEIENE-------------- 106
Query: 115 TVLENNELTTFICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
F+ + M M++ G + S EI+ EE Y++ Y + G
Sbjct: 107 ----------FLKNAMMMLVDGKSFEEIHESMEIQTEQLEE----HYKECAEYWIV--FG 150
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
E+ P +G+VGA+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+
Sbjct: 151 ETCPTMGLVGAVFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKA 209
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ + I++ +A+ GA P+
Sbjct: 210 NGMDLVKEQIVITEAIKGIAEGANPR 235
>gi|160939656|ref|ZP_02087004.1| hypothetical protein CLOBOL_04548 [Clostridium bolteae ATCC
BAA-613]
gi|158437447|gb|EDP15211.1| hypothetical protein CLOBOL_04548 [Clostridium bolteae ATCC
BAA-613]
Length = 294
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM-----GESLPAIGIVGAILGIIK 186
M++V + S ++ M+ E+ E+L HA+ PA G++G ++G+I
Sbjct: 120 MLVVDSVDSEKVRKAMETEL-----EQLDERHALDRRFYEKAASFAPAFGMIGTLVGLIL 174
Query: 187 AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
+GN+S L + V+L TL G +L+ +C P+ S++K+ ++ +V + ++
Sbjct: 175 MLGNMSDV-DALAKGMAVALITTLYGSLLANVVCLPMASKLKARHDEEFLCKQLVMEGVL 233
Query: 247 AYMNGAIPQVAIEYGRKVLPLS-ERPS 272
A G P+ E K+LP S ++P+
Sbjct: 234 AIQEGENPKFIEEKLYKLLPASYKKPA 260
>gi|117618549|ref|YP_856320.1| chemotaxis MotA protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559956|gb|ABK36904.1| chemotaxis MotA protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 252
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + ++ I+GG GG+P L+ +IV G +G + P V+ S L
Sbjct: 2 SLIGLVLALIAILGGNMIEGGHPSALLDLPAFLIVIGGTIGAALTQFPFSVVG----STL 57
Query: 63 EIFGY--KALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + L D +LL L N ++ E ID+ +
Sbjct: 58 KRFKWLLAPLKLDMQQQA-ELLENLAGNARRSGMLALEGMIDEIKDP------------- 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDI---ILYEKLKPYHAISHMGESLPAIGI 177
F+ ++M++ G ++ +I +++ EI+ L + +K Y A MG P +GI
Sbjct: 104 ----FLQKGVQMMVDGYEKT-KIHEVLENEIEFEQEDLEQTVKFYEA---MGGYCPTMGI 155
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
VGA+ G+I AMG L +P LG AI V+ T+ G+ + + P ++ K
Sbjct: 156 VGAVFGLIHAMG-LLDAPDKLGGAIAVAFIATIYGVSAANLIFLPFGNRYKG 206
>gi|304438418|ref|ZP_07398358.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368501|gb|EFM22186.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 263
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F + M+I G + + +++D E+ I+ + + G P +G++GA++G+
Sbjct: 113 FFRTGLGMVIDGMDPDF-VGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGL 171
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
I A+GNL+ K LG +I + T+LGI Y L P +++K + Q R+ I
Sbjct: 172 IAALGNLNDIDK-LGHSIAAAFVATILGIFTGYVLWMPFANKLKIMSEQEVSQKRMII-- 228
Query: 242 KKALIAYMNGAIPQVAIEYGRKV-LPLSERPSIE 274
+ +++ G P AIE V +P +ER +++
Sbjct: 229 -EGILSLQAGDSP-TAIEAKLMVFIPQTEREALK 260
>gi|268679795|ref|YP_003304226.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
gi|268617826|gb|ACZ12191.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
Length = 258
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 38/253 (15%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ I+G+ I+I I G GGNP ++ +IV + + + ++ +
Sbjct: 3 LTVILGMVISIASIAIGDIMEGGNPLHVLHITSFIIVVPTAMASAMTGTHPEYVRAAFKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
+ +F K D + + +++ + + + G + N +DD
Sbjct: 63 IKLVF--KKSPVDLHARIKQIIDLAVIARRDGILALETHANAMDD--------------- 105
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH----MGESLPA 174
F + M + G ++EIE E ++I+L E + YH +H GES P
Sbjct: 106 -----EFFKKGLSMAVDGT-EAHEIE----ETLEIMLEETEEYYHGAAHYWLLAGESCPV 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
IG++GA+LG+I A+ L +P + I + T T+ GI +Y P +++K+ K
Sbjct: 156 IGLIGAVLGLILALQKL-DNPAEMAAGIAGAFTATVTGIAGAYIFMGPWGNKLKA---KS 211
Query: 235 HRLYIIVKKALIA 247
H +I KK ++A
Sbjct: 212 HD-FIKEKKVILA 223
>gi|320529441|ref|ZP_08030529.1| flagellar motor protein MotA [Selenomonas artemidis F0399]
gi|320138407|gb|EFW30301.1| flagellar motor protein MotA [Selenomonas artemidis F0399]
Length = 287
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M+I G + + +++D E+ I+ + + G P +G++GA++G+I A+GNL
Sbjct: 144 MVIDGMDPDF-VGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGLIAALGNL 202
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIVKKALIAY 248
+ K LG +I + T+LGI Y L P +++K + Q R+ I + +++
Sbjct: 203 NDIDK-LGHSIAAAFVATILGIFTGYVLWMPFANKLKIMSEQEVSQKRMII---EGILSL 258
Query: 249 MNGAIPQVAIEYGRKV-LPLSERPSIE 274
G P AIE V +P +ER +++
Sbjct: 259 QAGDSP-TAIEAKLMVFIPQTEREALK 284
>gi|89893040|ref|YP_516527.1| flagellar motor protein MotA [Desulfitobacterium hafniense Y51]
gi|89332488|dbj|BAE82083.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 263
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 29/232 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST+IGL + + + G G + LI P I+I+ + + P++ +K
Sbjct: 3 LSTLIGLLLGFIAVGVGMILKGASLTALINPAAILIIIVGTIATIFIGFPMEDLKR---- 58
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
V KL IL + S+ E + + I ++ N
Sbjct: 59 -----------------VPKLFKILFTKQQLISKKELVKQFAEWTTVSRREGILSL--EN 99
Query: 121 ELTTFICDYMR----MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L D+++ M I GN + I +++ E+I + + MG P +G
Sbjct: 100 RLEEINDDFLKKGMGMAIDGNDAEF-IRDVLFEDISAMEERHRDGALVFTQMGTYAPTLG 158
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
++GA++G+I A+ NL++ + LG I + TLLGI Y L +P+ +++K
Sbjct: 159 VLGAVVGLISALSNLNE-VEALGHLISAAFVATLLGIFTGYVLWHPMANKLK 209
>gi|313896031|ref|ZP_07829585.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975456|gb|EFR40917.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 137 str. F0430]
Length = 285
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M+I G + + +++D E+ I+ + + G P +G++GA++G+I A+GNL
Sbjct: 142 MVIDGMDPDF-VGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGLIAALGNL 200
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIVKKALIAY 248
+ K LG +I + T+LGI Y L P +++K + Q R+ I + +++
Sbjct: 201 NDIDK-LGHSIAAAFVATILGIFTGYVLWMPFANKLKIMSEQEVSQKRMII---EGILSL 256
Query: 249 MNGAIPQVAIEYGRKV-LPLSERPSIE 274
G P AIE V +P +ER +++
Sbjct: 257 QAGDSP-TAIEAKLMVFIPQTEREALK 282
>gi|320106353|ref|YP_004181943.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
gi|319924874|gb|ADV81949.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
Length = 256
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 29/275 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++I GL + + I G GGN ++QP +IV G G ++ PL + S
Sbjct: 3 IASIGGLALAFIGIFVGMMMEGGNIGQIMQPTAALIVIGGTAGAVLLQFPLSIFLASIRG 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
+ +F ++ G D + +L+ K G S + + DP+
Sbjct: 63 FMGVFFHR--GTDGEATLNQLVGFANKARKSGIVSLDADLAKVSDPFLRRAL-------- 112
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEID-IILYEKLKPYHAISHMGESLPAIGI 177
M+ V E+ +M E+D YE+ P + G P +GI
Sbjct: 113 -------------MLAVDGTEPSEVRKIMRMELDNKAEYEEKIP-QVLESAGGFSPTVGI 158
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA+LG+I+ M +L ++ G I + T+ G+ L+ +C P ++K + + +
Sbjct: 159 IGAVLGLIQVMQHLDNIDEV-GKGIATAFVATIYGVALANLICIPAAGKLKIRQSDERMV 217
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ + + + + G P++ +E + ++P
Sbjct: 218 KEMMLEGVTSILEGMNPRM-VETKLRTFLFEQKPQ 251
>gi|325294744|ref|YP_004281258.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065192|gb|ADY73199.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 253
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMD--EEIDIILYEKLKPYHAISH-MGESLPAIGIVGA 180
+F D MRM+I G EIE + E + +KL A+ +G+ PA G++G
Sbjct: 107 SFFGDVMRMLIDG----LEIEEIKSTAESSMAQIEQKLSTEVAVWETLGDLFPAFGMIGT 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI---KSTRLKQHRL 237
++G+I+ + NLS P LG + V++ TL G IL+ LC P+ ++ K RL
Sbjct: 163 LIGLIQMLQNLSD-PSALGPGMAVAMITTLYGAILANVLCIPVAKKLKYYKDLRLLYLEA 221
Query: 238 YIIVKKALIAYMN 250
Y++ +A+ +N
Sbjct: 222 YLLTAEAIEKGLN 234
>gi|206890192|ref|YP_002248657.1| chemotaxis MotA protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742130|gb|ACI21187.1| chemotaxis MotA protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 253
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 26/227 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++GL I I +I G A GG LIQ +IV G G +++ P K I + +SL
Sbjct: 5 ALLGLIIGIGAVIAGNIAEGGTTAHLIQAAAAIIVFGGTFGAVILSFPFKDIVTAFMSLK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENN 120
IF + + D D +L +L+ K+G + E + IDD + L
Sbjct: 65 FIFLSRKVNFDETIDT--ILDLLVIARKRGLLALQEELDRIDDSF-----------LRRG 111
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T++ D + I+ + + EI EE I+ K Y + G P IGI+GA
Sbjct: 112 --ITYVIDGVSPNIIKESLNQEIYAY--EE---IIKRAAKVYDS---AGGYAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
ILG+I + N++ KI G I + T+ G+ + + P+ +I
Sbjct: 162 ILGLIHVLKNVADPSKI-GIGIATAFVATIYGVGSANLIFIPIAKRI 207
>gi|300853353|ref|YP_003778337.1| chemotaxis protein [Clostridium ljungdahlii DSM 13528]
gi|300433468|gb|ADK13235.1| chemotaxis protein [Clostridium ljungdahlii DSM 13528]
Length = 264
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S +I I + GF GGNP L VIV G G ++ PL V+K
Sbjct: 3 ISVVIFTIFGIAAVTAGFVMDGGNPTALFGGAAAVIVFGGTFGAVALSFPLDVLKRVPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
IF + + + D++ + Y +K E I + N
Sbjct: 63 FKVIFNPR---KASLVDLILYFKDVSYKTRKNGLLSLEGEISNDPN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI +++++ G + ++++ E++ + G P +GI+G
Sbjct: 106 -LDPFIKKGLQLVVDG-VDPQAVRDILELELESTSERHKQGASVFESAGGYGPTMGIIGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +G+L+ + LG IG + TL GI + L PL +++K K+ + +
Sbjct: 164 VMGMVHILGSLTDTAS-LGGKIGSAFLATLYGIGSANLLWLPLGNRLKQQDEKEVKEKTL 222
Query: 241 VKKALIAYMNGAIPQVAIE 259
+ +A++ G P E
Sbjct: 223 IIEAILYIQEGINPNTIAE 241
>gi|197120113|ref|YP_002140540.1| chemotaxis protein MotA [Geobacter bemidjiensis Bem]
gi|197089473|gb|ACH40744.1| chemotaxis MotA protein [Geobacter bemidjiensis Bem]
Length = 254
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 28/258 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ + I + GG G + L+QP +IV G +++ PL + +
Sbjct: 3 LSTIIGILLGIGAVFGGAALEGLHMSALMQPTAAIIVLGGTAAATIVSYPLPTLLTALKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F +D + ++ + G S + + D + +
Sbjct: 63 LKKVF--MPPNEDPEGVIKNIINYAAKARRNGLISLEQEAQTVKDSFTKKGIS------- 113
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++V ++ M+ E+ G P IGI+
Sbjct: 114 --------------LVVDGIDPQKLRETMEIELGSFEAHAKGSAEVFESAGGFAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA+LG+I M NLS P LG I V+ T+ G++ + C P +++K RLK+ L
Sbjct: 160 GAVLGLIHVMSNLS-DPSKLGGGIAVAFVATIYGLMTANIFCIPFGTKLKH-RLKEELLQ 217
Query: 239 I-IVKKALIAYMNGAIPQ 255
+V + LIA NG P
Sbjct: 218 KEMVIEGLIAIQNGENPH 235
>gi|57505392|ref|ZP_00371320.1| probable flagellar motor proton channel Cj0337c [Campylobacter
upsaliensis RM3195]
gi|57016217|gb|EAL53003.1| probable flagellar motor proton channel Cj0337c [Campylobacter
upsaliensis RM3195]
Length = 258
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 44/266 (16%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + + K++K +
Sbjct: 3 LSTILGIVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG------SRNETENHIDDPYNSTIFTSIP 114
L +F K G + + +L+ + + G NE EN
Sbjct: 63 LKVVF--KGSGVNLPERIAQLIEFAIVARRDGLLALESKTNEIENE-------------- 106
Query: 115 TVLENNELTTFICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
F+ + M M++ G + S EI+ EE Y++ Y I G
Sbjct: 107 ----------FLKNAMMMLVDGKSFEEIHESMEIQTEQLEE----HYKECAEYWII--FG 150
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
E+ P +G+VGA+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+
Sbjct: 151 ETCPTMGLVGAVFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKA 209
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ + +++ +A+ GA P+
Sbjct: 210 NGMDFVKEQVVITEAIKGIAEGANPR 235
>gi|256370965|ref|YP_003108789.1| MotA/TolQ/ExbB proton channel [Acidimicrobium ferrooxidans DSM
10331]
gi|256007549|gb|ACU53116.1| MotA/TolQ/ExbB proton channel [Acidimicrobium ferrooxidans DSM
10331]
Length = 267
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 114/258 (44%), Gaps = 26/258 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T +G+ + ++ I+ GGNP LI P +++V +G + LK I +
Sbjct: 3 VATPVGIVVALVAILVSMIMDGGNPAALIAPSAMILVLVGTVGVSLAGRRLKEIGQIVGA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
L KA + V +L++ ++G + + DP
Sbjct: 63 LRSAILAKAPSAEE--SVGQLVHFAEMARREGVLALEAAAKDLTDP-------------- 106
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ M++II G +I +++ +++ + M P +GI+
Sbjct: 107 ------FMRSGMQLIIDG-VEGDKIREILEADLEGMGTRHRAGAKFFKDMAGFAPTLGIL 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+I + NLS SP+ LG AI + T TL G++ + P+++++ +++ L
Sbjct: 160 GTVMGLIHVLANLS-SPQTLGPAISGAFTATLWGVMTANVFWLPISNKLAHLSEQENALR 218
Query: 239 IIVKKALIAYMNGAIPQV 256
++V ++A GA P++
Sbjct: 219 LLVIDGILAIQAGASPRL 236
>gi|322421652|ref|YP_004200875.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
gi|320128039|gb|ADW15599.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
Length = 254
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ + + + GG G + LIQP +IV G +++ P+ + +
Sbjct: 3 LSTIIGIALGLFAVFGGAALEGLHMSALIQPTAAMIVLGGTAAATIVSFPVPTLLAAVKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN------ETENHIDDPYNSTIFTSIP 114
+ ++F +D V+K I+ Y K RN + + D + +
Sbjct: 63 VKKVFMPP---KDDPEGVIK--NIINYA-AKARRNGLISLEQEAQTVKDSFTKKGIS--- 113
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESL 172
++V ++ M EI++ +E + A G
Sbjct: 114 ------------------LVVDGIDPQKLRETM--EIELSSFESHAKHSAEVFEAAGGFA 153
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P IGI+GA+LG+I M NLS P LG I V+ T+ G++ + C P +++K RL
Sbjct: 154 PTIGIIGAVLGLIHVMSNLSD-PSKLGGGIAVAFVATIYGLMTANIFCIPFGTKLK-CRL 211
Query: 233 KQHRLYI-IVKKALIAYMNGAIPQ 255
K+ L +V + LIA NG P
Sbjct: 212 KEELLQKEMVIEGLIAIQNGENPH 235
>gi|330830038|ref|YP_004392990.1| flagellar motor component MotA [Aeromonas veronii B565]
gi|328805174|gb|AEB50373.1| Flagellar motor component MotA [Aeromonas veronii B565]
Length = 252
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 28/230 (12%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + ++ I+GG GG+P L+ +IV G +G + P V+ G ++
Sbjct: 2 SLIGLVLALIAILGGNMIEGGHPSALLDLPAFLIVIGGTIGAALTQFPFSVV---GSTMR 58
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + + +LL L N ++ E I++ +
Sbjct: 59 RFKWLLSPLKLDLLEQAQLLETLAGNARRSGMLALEGMIEEIKDP--------------- 103
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDI---ILYEKLKPYHAISHMGESLPAIGIVG 179
F+ ++M++ G ++ +I +++ EI+ L + +K Y A MG P +GIVG
Sbjct: 104 --FLKKGVQMMVDGYEKA-KIHEVLENEIEFEQEDLEQTVKFYEA---MGGYCPTMGIVG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
A+ G+I AMG L +P LG AI V+ T+ G+ + + P ++ K
Sbjct: 158 AVFGLIHAMG-LLDAPDKLGGAIAVAFIATIYGVSAANLIFLPFGNRYKG 206
>gi|323490129|ref|ZP_08095349.1| flagellar motor protein MotA [Planococcus donghaensis MPA1U2]
gi|323396177|gb|EGA89003.1| flagellar motor protein MotA [Planococcus donghaensis MPA1U2]
Length = 256
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 33/265 (12%)
Query: 12 LCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
+ +IGG G NP L P +VI+ + ++A P+ IK SL ++
Sbjct: 4 VVLIGGMILKGSNPIALYNPAALVIIFAGTIACLLVAFPMDEIKKIP-SLFKVI----FS 58
Query: 72 QDTYCDVLKLLYIL----MYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENNELTTF 125
+ V +++ + M K+G + E ++DP F
Sbjct: 59 EQKKIPVKEMIPMFTGWAMLARKEGLLALEEKSEEVEDP--------------------F 98
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ ++M++ G ++ + I +LM+EEI + + G P +G++GA++G++
Sbjct: 99 LQRGLKMVVDGQSQEH-IRDLMEEEIAAMEERHELGAKIFAQAGTYAPTLGVLGAVIGLV 157
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
A+G+L +LG +I + TL GI Y L +P +++K + + +I+ + L
Sbjct: 158 AALGHLDDV-ALLGKSISAAFIATLFGIFSGYVLWHPFANKLKRKSEAEVKTKMIMLEGL 216
Query: 246 IAYMNGAIPQVAIEYGRKVLPLSER 270
+A G + E LP +R
Sbjct: 217 LAVQEGLPVRTVEEKLLTYLPAKDR 241
>gi|302878265|ref|YP_003846829.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302581054|gb|ADL55065.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 246
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 126/261 (48%), Gaps = 38/261 (14%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++GL + I+ I+ G G N +L Q +IV LG ++ + KV ++ +
Sbjct: 5 TLLGLLVAIVGILSGQILEGSNLSVLFQGSAFLIVFCGTLGAVMVQSSAKVF----LTAI 60
Query: 63 EIFGY-----KALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
++ + K+ G D L + + + +R E ++ IP +
Sbjct: 61 KMGAWAFSTPKSAGPD--------LILQLTSWGTLARKEGMLALE--------ARIPGIA 104
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI---SHMGESLPA 174
+ F+ +++++ G++ + +I +++ E DI +E+L+ A + G S P
Sbjct: 105 D-----PFMKKGVQLLVDGHS-AEKIRDVL--ETDIQSWEQLRWQSARVWEAAAGYS-PT 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+GI+GA+LG++ M NLS+ P LG+ I V+ T+ G+ + L P+ +++K+ ++Q
Sbjct: 156 VGIIGAVLGLMHVMQNLSE-PSKLGSGIAVAFVATIYGVAFANLLFLPVANKLKAIIMQQ 214
Query: 235 HRLYIIVKKALIAYMNGAIPQ 255
+ +V L A NG P+
Sbjct: 215 THMRDMVIDGLGAIANGENPR 235
>gi|297183086|gb|ADI19230.1| flagellar motor component [uncultured delta proteobacterium
HF0200_14D13]
Length = 321
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 75 YCDVLKLLYILMYNLKKGSRNE--------TENHIDDPYNSTIFTSIP-TVLENNELTTF 125
+ D + + + ++G R + N + N+ + T +++++L +
Sbjct: 100 FSDATRAFWYAIQAFRQGRREDEFLAVYQTVVNMCEKRSNNELITDEEIEAVKSSDLRNW 159
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D++ + IV IE ++ EI++ Y + + MG++ PA G++G ++G+I
Sbjct: 160 LQDFIAVDIVSEEM---IEEIVRSEIEMYNYRSFEEIDLLEFMGKATPAFGMIGTVVGLI 216
Query: 186 KAMGNLSQSPKILGTAIG---VSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
+G+ S + +G V+L TL G++LS + P+ S+ + Q L +++
Sbjct: 217 LMLGSSSAEGADIAGVMGGMSVALITTLYGVLLSQLIFTPIASKRFQLKESQVLLLEMIR 276
Query: 243 KALIAYMNGAIPQVA 257
+ L+ +P+ A
Sbjct: 277 EGLLYLKRRELPETA 291
>gi|254519412|ref|ZP_05131468.1| chemotaxis MotA protein [Clostridium sp. 7_2_43FAA]
gi|226913161|gb|EEH98362.1| chemotaxis MotA protein [Clostridium sp. 7_2_43FAA]
Length = 268
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 122/269 (45%), Gaps = 25/269 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T +GL ++I+ +I G +G + I ++I G L ++ L+ +K+ G +
Sbjct: 8 TSVGLILSIVLMIYGML-IGSSLKIFWDVASVIITVGGSLSALLITYSLEEVKNMGKLFI 66
Query: 63 EIFGY-KALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ F K+ G+D + I +L K +R E ++D + +E+
Sbjct: 67 QAFKENKSSGKD--------IIIRFGSLSKKARREGLLSLEDDISE---------MED-- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G I +++ EI + + + G PA G++G +
Sbjct: 108 --PFMKKGLQMVVDG-IEPETIREILELEIGEMENRHERGAGIYAAWGAYAPAFGMLGTL 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I+ + NL+ I + +G +L T G +L+ LCNP+ S ++ K+ ++
Sbjct: 165 IGLIQMLANLTDVANI-ASGMGKALITTFYGSLLANILCNPIASNLRQKSAKEAGEREMI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P++ E LP E+
Sbjct: 224 LEGILAIQSGVNPRIVEEKLITYLPPKEK 252
>gi|152976911|ref|YP_001376428.1| flagellar motor protein MotA [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152025663|gb|ABS23433.1| MotA/TolQ/ExbB proton channel [Bacillus cytotoxicus NVH 391-98]
Length = 264
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ M+ +I G + ++E +++ E++ + K S G P +G++GA++G+
Sbjct: 109 FLLRGMKFVIDG-VSAEDLERILEAELEAMEERHAKGAAIFSQAGTYAPTLGVLGAVIGL 167
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQHRLYIIV 241
+ A+GNL+ K LG AI + T+ GI Y L +P +++K + L++ RL I
Sbjct: 168 VAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAELEKKRLII-- 224
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L SER +E A++
Sbjct: 225 -DCLLMLQEGTYPFIMKNRILGALSASERKKLEKGAEQ 261
>gi|229827390|ref|ZP_04453459.1| hypothetical protein GCWU000182_02778 [Abiotrophia defectiva ATCC
49176]
gi|229788328|gb|EEP24442.1| hypothetical protein GCWU000182_02778 [Abiotrophia defectiva ATCC
49176]
Length = 265
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
++IV + +++ EI I K + ++ MG PA G++G ++G++ +
Sbjct: 118 LLIVDGTDPELVRGILETEISCIEDRHKAKFGFWETLAAMG---PAWGMIGTLIGLVNML 174
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
NLS P +G A+ ++L T G L+ +C P+T+++K ++ L I+ + +++
Sbjct: 175 ANLSD-PSAIGPAMAIALITTFYGSFLANWMCAPVTNKLKGNSAEEIMLKGIMVEGILSI 233
Query: 249 MNGAIPQVAIEYGRKVLPLSERPS 272
G P+V E + L +ER +
Sbjct: 234 QAGENPRVIEEKLKSFLTPAEREA 257
>gi|114777570|ref|ZP_01452551.1| hypothetical protein SPV1_07681 [Mariprofundus ferrooxydans PV-1]
gi|114552041|gb|EAU54558.1| hypothetical protein SPV1_07681 [Mariprofundus ferrooxydans PV-1]
Length = 252
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 125/272 (45%), Gaps = 25/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ + ++ A+GG I P ++IV G +G ++ PLK
Sbjct: 3 IATIIGILVAFGLVVS---AIGGGISSFIDPPSMLIVIGGTVGVLLVGYPLKTALSVIGI 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F YK D+ +V+ L L ++K E + + N
Sbjct: 60 VMKTFLYKV---DSGSEVIAKLVELAQTVRKDGILALEGEVGNIDNK------------- 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M I G S IE+++ +E+D + + +G P++G++G
Sbjct: 104 ----FMAKGLQMAIDGQEPSV-IEDILYKEMDKVAERHALGADMFTSLGTYAPSMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S P +G ++ ++L T G +++ L P++ ++K+ ++ ++ I
Sbjct: 159 LVGLVLMLQNMSD-PSSIGPSMSIALLTTFYGALMANILFLPMSGKLKNRSKQEMLVHEI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + + + G P++ + LP ER S
Sbjct: 218 ILVGVQSLVIGENPRIMEQKLLGYLPPKERKS 249
>gi|157736661|ref|YP_001489344.1| flagellar motor protein MotA [Arcobacter butzleri RM4018]
gi|315635827|ref|ZP_07891089.1| flagellar motor protein MotA [Arcobacter butzleri JV22]
gi|157698515|gb|ABV66675.1| flagellar motor component MotA [Arcobacter butzleri RM4018]
gi|315479806|gb|EFU70477.1| flagellar motor protein MotA [Arcobacter butzleri JV22]
Length = 252
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH----MGESLPAIGIVGA 180
F+ + + M+I G+ E ++E ++ ++ E YH+ SH GE+ P +G+VGA
Sbjct: 107 FLKEALSMVIDGSK-----EEQIEESLEPVIEETEHYYHSASHYWLLAGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR---LKQHRL 237
+LG+I A+ L +P + I + T T+ GI SY P ++KS +K+ +L
Sbjct: 162 VLGLILALQKL-DNPAEMAAGIAGAFTATVTGIAGSYMFLGPWGLKMKSKGHVIVKEQQL 220
Query: 238 YIIVKKAL 245
+ K +
Sbjct: 221 ILAAAKGM 228
>gi|332704091|ref|ZP_08424179.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332554240|gb|EGJ51284.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 250
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ +R++ G+A + + +M+ EID + + MG PA G++G ++G+
Sbjct: 104 FLRRGVRLVADGSAPNL-VRAVMETEIDFMKQRHRRGQSVFKGMGAMAPAFGMIGTLVGL 162
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI-IVKK 243
++ + N++ P +G+A+ V+L T G + S + P+ +++ R + Y+ I+
Sbjct: 163 VQMLQNMA-DPSSIGSAMAVALLTTFYGAVASNVIFLPMAKKLEE-RSNEEAFYMAIIVD 220
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSER 270
++A NG P+V E + L S R
Sbjct: 221 GVMAIQNGENPRVVQERLQAFLAPSMR 247
>gi|297618037|ref|YP_003703196.1| MotA/TolQ/ExbB proton channel [Syntrophothermus lipocalidus DSM
12680]
gi|297145874|gb|ADI02631.1| MotA/TolQ/ExbB proton channel [Syntrophothermus lipocalidus DSM
12680]
Length = 263
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 22/273 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++IGL I + +I GF G +L++ +IV G +G ++ + +K
Sbjct: 3 LTSLIGLIIGLAGLILGFVLEEGKVGMLLKETAALIVFGGTIGAVTVSFSSEELKTIPYF 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K + D L + D S+ T LE
Sbjct: 63 LKVVFTNKKIEFGETIDQL-------------------VQVADKARREGLLSLETQLEEL 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ ++++I G N+++ EI+ + + G P +GI+G
Sbjct: 104 E-NEFMRRALQLVIDGTDPEL-TRNMLEMEIEAFEKRQKLGVDIFNAAGGFAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+S+ P LG AI V+ TL GI + L P +IK K+ +L +
Sbjct: 162 VMGLVQVLSNVSE-PDKLGGAIAVAFIATLYGIFSANILWIPFAGKIKVKTEKEVKLMEL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V + +++ G P+V E L +E+ ++
Sbjct: 221 VLEGVLSVQAGENPRVIREKLMTFLAPAEKQAM 253
>gi|83648503|ref|YP_436938.1| flagellar motor protein PomA [Hahella chejuensis KCTC 2396]
gi|83636546|gb|ABC32513.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 252
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 83/159 (52%), Gaps = 3/159 (1%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ F+ ++++I G+ ++ L+ ++ ++ + + MG+ PA+
Sbjct: 95 LEGKEIPNAFLSKGIQLLIDGHDGDV-VKALLTKDRNLTVDRHKQGSSVFGAMGDVAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+ PK +G A+ V+L TL G +L+ + P+ ++K ++
Sbjct: 154 GMIGTLIGLVAMLSNMD-DPKSIGPAMAVALLTTLYGAMLANMIAIPVADKLKLRMGEEE 212
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ ++ AL+A G P+V R LP +R + E
Sbjct: 213 QIKSMIIDALLAIQAGQNPRVIETMLRTYLPEGKRQTEE 251
>gi|229117998|ref|ZP_04247358.1| hypothetical protein bcere0017_42680 [Bacillus cereus Rock1-3]
gi|228665447|gb|EEL20929.1| hypothetical protein bcere0017_42680 [Bacillus cereus Rock1-3]
Length = 264
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 148 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIDK-LGHAISGAFIATIFGIFSGYVLWHPFA 206
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + +++ RL I L+ G P + L +ER +EI A++
Sbjct: 207 NKLKQKSAAEIEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEIGAEK 261
>gi|331006365|ref|ZP_08329675.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
gi|330419825|gb|EGG94181.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
Length = 248
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 113/254 (44%), Gaps = 24/254 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDS-GVSL 61
++IG+ I ++GG + GG L+ +IV G +G ++ P+ + + +S
Sbjct: 7 SVIGIMIAFAALLGGNFLEGGAWQQLLNGPAALIVFGGTIGAAILQTPMSSLSRALKLSR 66
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + T + I N G ++ E DPY I ++ +++
Sbjct: 67 WVLFPPTIDYKKTISKIANWSTIARKNGLLGLESQVEIE-KDPY---IQKALKLLIDEGS 122
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
T R E + ++DE+ D + ++ Y + MG P +GI+GA+
Sbjct: 123 PQTL------------RRVLESDLILDEQRD---QDAVRFY---ASMGGYAPTVGIIGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I M NL P +LG+ I V+ T+ G+ L+ L P+ +++ + +Q L +V
Sbjct: 165 MGLIYVMRNLD-DPSLLGSGIAVAFIATIYGVALANLLLLPIANKLTTYINQQSHLKELV 223
Query: 242 KKALIAYMNGAIPQ 255
+ + +G P+
Sbjct: 224 IEGTVYVADGENPR 237
>gi|206603128|gb|EDZ39608.1| Putative flagellar motor component (MotA) [Leptospirillum sp. Group
II '5-way CG']
Length = 260
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 29/260 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPY-ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
++T++GL I I+GG A+ G P + Q +IV G +G ++ P+ I +
Sbjct: 3 ITTLLGLVIGFGGILGG-AAIEGLPLGTIFQMTAAIIVFGGTIGATLVTTPMAQILAAVR 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPT 115
S+ +F + D +K++ ++ L K SR E E+ +DDP+
Sbjct: 62 SVPRLF------LNPKSDPVKIIRKIV-ELSKVSRKEGLLKLESFLDDPFIRG------- 107
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
F+ +RM++ G + ++ + ++ E I E+ G P I
Sbjct: 108 -------DAFLTRGVRMVMDGTDIA-KVRDALETESRYIEDEEAASAKVFESAGGYAPTI 159
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GI+GA+LG+I M NLS P L I + T+ G+ + PL+ ++K +
Sbjct: 160 GILGAVLGLIHVMSNLSD-PNKLAEGIATAFVATVYGVGSANLAYLPLSGKLKIKNHYEG 218
Query: 236 RLYIIVKKALIAYMNGAIPQ 255
R I+ + L+A G P
Sbjct: 219 RNREIIIEGLVAIGQGENPN 238
>gi|125974910|ref|YP_001038820.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum ATCC 27405]
gi|256003833|ref|ZP_05428820.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum DSM 2360]
gi|281418624|ref|ZP_06249643.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum JW20]
gi|125715135|gb|ABN53627.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum ATCC 27405]
gi|255992171|gb|EEU02266.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum DSM 2360]
gi|281407708|gb|EFB37967.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum JW20]
gi|316939121|gb|ADU73155.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum DSM 1313]
Length = 279
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 31/277 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGL-GGFVMANPLKVIKDSGV 59
++TIIGL + ++C+I + G+ ++I G GL V + K V
Sbjct: 3 LATIIGLILGVICVIWSIM-LDGSLLSFWDFASVIITLGGGLCATLVSCKITEFAKIMKV 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
++ + G + QDT +++L L ++ E+ ++ N + S+ V++
Sbjct: 62 TVKVLRGKEPRPQDT----IRMLVELSLKARREGLLSLESEQENIDNDFLKQSLQLVVDG 117
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
E I D M + E+EN M D K M PA G++G
Sbjct: 118 VE-PEVIVDTMDL---------ELEN-MKARHD-------KGVSLFKTMAAQFPAWGMIG 159
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI--KSTRLKQHRL 237
++G+IK + +L KI G+A+ V+L T G IL+ +CNP+ +++ KS Q +
Sbjct: 160 TLIGLIKLLESLDDPSKI-GSAMAVALVTTFYGSILANLICNPIATKLAEKSKEEIQEKK 218
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
II + +++ G P++ +E+ K LS + +E
Sbjct: 219 MII--EGVLSIQAGENPRI-LEHKLKTF-LSPKQKLE 251
>gi|229098969|ref|ZP_04229904.1| hypothetical protein bcere0020_41930 [Bacillus cereus Rock3-29]
gi|229105136|ref|ZP_04235787.1| hypothetical protein bcere0019_42700 [Bacillus cereus Rock3-28]
gi|228678317|gb|EEL32543.1| hypothetical protein bcere0019_42700 [Bacillus cereus Rock3-28]
gi|228684467|gb|EEL38410.1| hypothetical protein bcere0020_41930 [Bacillus cereus Rock3-29]
Length = 266
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIDK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + +++ RL I L+ G P + L +ER +EI A++
Sbjct: 209 NKLKQKSAAEIEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEIGAEK 263
>gi|57237388|ref|YP_178401.1| flagellar motor protein MotA [Campylobacter jejuni RM1221]
gi|86149176|ref|ZP_01067408.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88597298|ref|ZP_01100533.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|205356013|ref|ZP_03222781.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8421]
gi|218561996|ref|YP_002343775.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|57166192|gb|AAW34971.1| chemotaxis protein MotA, putative [Campylobacter jejuni RM1221]
gi|85840534|gb|EAQ57791.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88190359|gb|EAQ94333.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359702|emb|CAL34488.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|205346137|gb|EDZ32772.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8421]
gi|284925609|gb|ADC27961.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315057757|gb|ADT72086.1| Flagellar motor rotation protein MotA [Campylobacter jejuni subsp.
jejuni S3]
gi|315927860|gb|EFV07185.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
Length = 258
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 32/260 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP ++ +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G + + +L+ + + G S + +EN
Sbjct: 63 LKVVF--KGSGVNLPERIAQLIEFAIIARRDGL--------------LALESRTSEIENE 106
Query: 121 ELTTFICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
F+ + M M++ G + S EI+ EE Y++ Y + GE+ P +
Sbjct: 107 ----FLKNAMMMLVDGKSFEEIHESMEIQTEQLEE----HYKECAEYWIV--FGETCPTM 156
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G+VGA+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ +
Sbjct: 157 GLVGAVFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLV 215
Query: 236 RLYIIVKKALIAYMNGAIPQ 255
+ I++ +A+ GA P+
Sbjct: 216 KEQIVITEAIKGIAEGANPR 235
>gi|94500303|ref|ZP_01306836.1| flagellar motor protein [Oceanobacter sp. RED65]
gi|94427602|gb|EAT12579.1| flagellar motor protein [Oceanobacter sp. RED65]
Length = 247
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 150 EIDIILYEK--LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLT 207
E+D+ E L+ H +G P IGI+GA+LG+I+ MGNL Q P +G I +
Sbjct: 129 ELDMYKQEDAGLEAAHVYESLGGYAPTIGILGAVLGLIQVMGNL-QDPAAIGPGIATAFV 187
Query: 208 GTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
T+ G+ + + P+ S+IK K+++ ++ + L+A G P
Sbjct: 188 ATIYGVGSANLIFLPIASRIKHIVKKEYQYNELIVEGLVAISEGEHPN 235
>gi|309388828|gb|ADO76708.1| MotA/TolQ/ExbB proton channel [Halanaerobium praevalens DSM 2228]
Length = 270
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 125/274 (45%), Gaps = 23/274 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL I I G +GGN + I ++V G L G +++ + +K+ V
Sbjct: 3 LATIVGL-IAGAVIFGSVALLGGNVGVFISVQSALVVFGGTLAGVMISYTFEDLKN--VP 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ QD + ++ L+ N + +R E ++D + +E+
Sbjct: 60 NL----FRVSFQDDNLESEHVIENLV-NFAEKARREGLLALEDDASK---------MEDE 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G + N+++ ++ + K + MGE PA G+VG
Sbjct: 106 ----FLQKGIQLVVDGTDPEL-VRNILETKLTFLQERHAKGRGIFATMGELAPAFGMVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + L P LG + V+L TL G +L+ + PL+ +K+ + + +
Sbjct: 161 LIGLIQMLSQLD-DPDQLGGGMAVALITTLYGALLANWIFIPLSKNLKTQSDHEIHVKEV 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + +++ G P++ E L E+ +E
Sbjct: 220 IIEGILSIQAGENPRIVKEKLHAFLSEGEKQEVE 253
>gi|154250210|ref|YP_001411035.1| MotA/TolQ/ExbB proton channel [Fervidobacterium nodosum Rt17-B1]
gi|154154146|gb|ABS61378.1| MotA/TolQ/ExbB proton channel [Fervidobacterium nodosum Rt17-B1]
Length = 262
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++V + N+M+ EID+ E + +G PA G++G ++G+I+ + +L+
Sbjct: 114 LVVDGTEPEVLRNMMEIEIDMATAEMMDQKAFFDSLGTFGPAFGMIGTLVGLIQMLKSLN 173
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+P+ LG ++ V+L TL G IL+ + P+ +I ++ + +I+ G
Sbjct: 174 -NPETLGPSMAVALITTLYGSILANIVGIPVAEKIAKRAADLEVFKRMILEGIISIQAGE 232
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQ 278
P+V E + LP ER E Q
Sbjct: 233 NPRVLEEKLKSYLPSQERTKYEAQVQ 258
>gi|222824333|ref|YP_002575907.1| flagellar motor component MotA [Campylobacter lari RM2100]
gi|222539554|gb|ACM64655.1| flagellar motor component MotA [Campylobacter lari RM2100]
Length = 257
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + ++ I G GGNP ++ +IV + A K +K +
Sbjct: 3 LSTILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
L +K G + + +L+ + + G + N ID+
Sbjct: 63 LK--LAFKGAGVNLSQRIAELVEYSVIARRDGLLALESKTNEIDNE-------------- 106
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ + M M++ G + E++ + ++ Y K + I GE+ P +G+V
Sbjct: 107 ------FLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKECAEYWI-RFGETCPTMGLV 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G++ A+ L P+ + I + T T+ GI +Y+L P +IK+ + +
Sbjct: 160 GAVMGLMLAL-QLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKER 218
Query: 239 IIVKKALIAYMNGAIPQ 255
I++ A+++ GA P+
Sbjct: 219 IVISHAIVSIAEGANPR 235
>gi|118588412|ref|ZP_01545821.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118439118|gb|EAV45750.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 255
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
Query: 138 ARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
A YE+E + M+ E D+ L + +G+S PA G++G ++G+++ + N+
Sbjct: 114 ADGYELEFIRESMERERDLQLSRLSEGKRVFKALGDSAPAFGMIGTLVGLVQMLANM-DD 172
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST----------------RLKQHRLY 238
P +G ++ V+L TL G ++S LC PL ++ + ++++ +
Sbjct: 173 PAAIGPSMAVALLTTLYGALISNILCLPLVDKLDAKFDVDDLNQTLIIDGVCQIRESKSP 232
Query: 239 IIVKKALIAYM 249
++K+ LIAY+
Sbjct: 233 ALIKEMLIAYL 243
>gi|332703400|ref|ZP_08423488.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332553549|gb|EGJ50593.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 251
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 106/235 (45%), Gaps = 27/235 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ GL I L ++GG MGG+ ++ I I+IV G L +A P + ++ + +
Sbjct: 3 IATLGGLIIG-LTMVGGAIYMGGDSFLFINLPSILIVIGGTLAAICVAFPFEEVRQAIAA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDD-PYNSTIFTSIPTVLEN 119
+ F + + D+ M + SR E +++ + + ++ +
Sbjct: 62 GFKAFASRKVRPQEVVDI-------MIRVADISRREGLVALENIQTENKVLKKACQLIAD 114
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
N I D +R+ I R + I +E+ + KL + PA G++G
Sbjct: 115 NADPDIIRDTLRIEISSMKRRHRI----GQEV----FRKLAGFA---------PAFGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
++G+++ + L PK +G A+ V++ T G +L+ + P+ ++ + L++
Sbjct: 158 TLIGLVQMLARLD-DPKAIGPAMAVAIITTFYGSVLANLIFLPIAGKLNARTLQE 211
>gi|288942519|ref|YP_003444759.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288897891|gb|ADC63727.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 252
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
++ ++ ++I++ + + Y E PA+G++G ++G+++ + N+S PK +G A+
Sbjct: 121 VQKVLSKDINLAIQRQEAGYSVFKATAEVAPAMGMIGTLIGLVQMLANMS-DPKAIGPAM 179
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+L TL G +L+ ++ P+ ++K ++ ++ +++ G P+V +
Sbjct: 180 AVALLTTLYGAVLANAVATPIAEKLKLRSGEEKLAKTLILESISGIQEGLNPRVLEQLLM 239
Query: 263 KVLPLSERPS 272
LP +R S
Sbjct: 240 TYLPEHQRQS 249
>gi|124516289|gb|EAY57797.1| putative flagellar motor component (MotA) [Leptospirillum rubarum]
Length = 260
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 29/260 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPY-ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
++T++GL I I+GG A+ G P + Q +IV G +G ++ P+ I +
Sbjct: 3 ITTLLGLVIGFGGILGG-AAIEGLPLGTIFQMTAAIIVFGGTIGATLVTTPMAQILAAVR 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPT 115
S+ +F + D +K++ ++ L K SR E E+ +DDP+
Sbjct: 62 SVPRLF------LNPKSDPVKIIRKIV-ELSKVSRKEGLLKLESFLDDPFIRG------- 107
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
F+ +RM++ G + ++ + ++ E I E+ G P I
Sbjct: 108 -------DAFLTRGVRMVMDGTDIA-KVRDALETESRYIEDEEAASAKVFEAAGGYAPTI 159
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GI+GA+LG+I M NLS P L I + T+ G+ + PL+ ++K +
Sbjct: 160 GILGAVLGLIHVMSNLSD-PNKLAEGIATAFVATVYGVGSANLAYLPLSGKLKIKNHYEG 218
Query: 236 RLYIIVKKALIAYMNGAIPQ 255
R I+ + L+A G P
Sbjct: 219 RNREIIIEGLVAIGQGENPN 238
>gi|322435022|ref|YP_004217234.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321162749|gb|ADW68454.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 261
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 116/276 (42%), Gaps = 27/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++I G+ + + I+ G GG+ + QP +IV G +G ++ P+ + +
Sbjct: 3 LASIGGIVLALAGILAGMMIEGGSIAQITQPTAAMIVLGGTIGAVMLQFPMNIFLAAMKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
++++F +K G D + +++ K G S + + DP+
Sbjct: 63 IVKVFLHK--GHDGEAVLAQIVDFANKARKSGIVSLDAELAAVHDPFLKQAL-------- 112
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
M+ V E+ +M E+D + K MG P +GI+
Sbjct: 113 -------------MLAVDGTEPSELRKIMQLELDNKSTIEEKIPAVFEAMGGYSPTVGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA+LG+I+ M +L ++ G I + T+ G+ ++ +C P ++K ++ L
Sbjct: 160 GAVLGLIQVMKSLDNIDEV-GRGIATAFVATIYGVAVANLICLPAAGKLKFRHAEEVMLK 218
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ + + + + G P++ IE + +P E
Sbjct: 219 EMMLEGVCSILEGMNPRM-IETKLRTFLFESKPGAE 253
>gi|296135639|ref|YP_003642881.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|295795761|gb|ADG30551.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 247
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 30/258 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + + I+ G GG+ +IQ +IV G G ++ PLKV
Sbjct: 5 SVIGVVVALGSILLGQLLEGGHISSIIQGTAFLIVIGGTTGATMLQFPLKV--------- 55
Query: 63 EIFGYKALGQDTYCDVLKLL-YILMYNLKKGSRNETENHI---DDPYNSTIFTSIPTVLE 118
+ LK+L +I++ KG ET I D ++ ++E
Sbjct: 56 ------------FIRSLKMLPWIVLP--PKGDPQETIKQILEWSDTARKNGLLALEAMIE 101
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ F+ ++M++ G +I + +++EI + + + G P +GI+
Sbjct: 102 SVP-DPFVKKGLQMLVDGT-DPEKIRSTLEQEIGAVEHHDNQAAKVYESSGGYAPTVGIL 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA+LG+I M NL+ P LG I V+ T+ G+ + P+ +++KS + +L
Sbjct: 160 GAVLGLIHVMENLA-DPSKLGGGIAVAFVATVYGVGSANLFFLPVANKLKSIVHNRAKLQ 218
Query: 239 IIVKKALIAYMNGAIPQV 256
+ L+A G P++
Sbjct: 219 EMQVDGLVAIAEGENPRI 236
>gi|23100000|ref|NP_693466.1| flagellar motor protein MotA [Oceanobacillus iheyensis HTE831]
gi|22778231|dbj|BAC14501.1| motility protein A (flagellar motor rotation) [Oceanobacillus
iheyensis HTE831]
Length = 261
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+F+ +++ I G + + I+++M E+I+ + + + G P +G++GA++G
Sbjct: 107 SFLSSGLQLAIDGQSPDF-IKDIMLEKIEAMEQRHEEGAAIFTQAGTYAPTLGVLGAVIG 165
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I A+G++S LG AI + TLLGI Y L +P ++++ ++ I+ +
Sbjct: 166 LIAALGDMSDIDA-LGAAISAAFIATLLGIFTGYVLWHPFANKLREKSKREVLQKEIIVE 224
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+++ G + E +LP + SI+
Sbjct: 225 GILSITTGDSRLIVQEKLGSLLPSKDIASIK 255
>gi|260776527|ref|ZP_05885422.1| Flagellar motor rotation protein MotA [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607750|gb|EEX34015.1| Flagellar motor rotation protein MotA [Vibrio coralliilyticus ATCC
BAA-450]
Length = 228
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 152 DIILYEKLKPYHA--ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
DI+L ++ + A G+ PA+G++G ++G++ + N+ PK +G A+ V+L T
Sbjct: 102 DIVLTDERHDFGASVFRAFGDVAPAMGMIGTLVGLVAMLSNMD-DPKAIGPAMAVALLTT 160
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLS 268
L G ILS + P+ ++ S R Q +L ++ ++A +G P+V Y + L
Sbjct: 161 LYGAILSNMVFFPIADKL-SLRRDQEKLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEG 219
Query: 269 ER 270
+R
Sbjct: 220 KR 221
>gi|187932852|ref|YP_001887660.1| chemotaxis protein MotA [Clostridium botulinum B str. Eklund 17B]
gi|187721005|gb|ACD22226.1| putative chemotaxis protein MotA [Clostridium botulinum B str.
Eklund 17B]
Length = 258
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 32/264 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++ L T + +I F GG L Q +IV G G ++ P V+K
Sbjct: 3 MMIVLSLIFTFIALILVFLLEGGAITALFQLTAAIIVFGGTFGALGISFPGNVLK----- 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN--HIDDPYNST----IFTSIP 114
K ++ KK N EN D T + +
Sbjct: 58 -------------------KFPKVMSIAFKKRKNNMEENLLFFKDISTRTRKDGLLSLER 98
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
V +N++L +FI +++ I G +S I+N+++ +++ + S G P
Sbjct: 99 EVSKNSDLDSFIKKGLQLAIDGVEQS-SIKNILETKLEQMSERHQAGIEMFSAAGGYAPT 157
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+GI+G ++G+I+ + NL+ P +LG I + TL GI+ + P+ +++K +++
Sbjct: 158 MGIIGTVMGLIQVVSNLN-DPTVLGPKIAAAFIATLYGILSANIFWLPIANKLKVLDMEE 216
Query: 235 HRLYIIVKKALIAYMNGAIPQVAI 258
+ ++ +A++ G P +
Sbjct: 217 YNEKEMIIQAIVLIQQGTNPNTLV 240
>gi|317121530|ref|YP_004101533.1| MotA/TolQ/ExbB proton channel [Thermaerobacter marianensis DSM
12885]
gi|315591510|gb|ADU50806.1| MotA/TolQ/ExbB proton channel [Thermaerobacter marianensis DSM
12885]
Length = 285
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 26/261 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G + I ++ GG L+ P ++V G LG + + L ++ +
Sbjct: 3 LGTVAGFVLAIAAVLIANVMEGGELRQLLNPSASLLVFGGTLGATLASAGLANVRLVPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
+L + + + + K++ + ++G S E ++DDP
Sbjct: 63 IL--YALRPPRLEPRQLIEKMVQLAQQARREGLLSLEEERKNLDDP-------------- 106
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F ++ +I G A +E +M I+ L + G P +GI+
Sbjct: 107 ------FFAKGLQFVIDG-ADPEMVEEVMANAIEAEQRHHLVAAGVLETAGGYAPTMGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G +LG+I +GNL + K LG AI V+ T GI + L PL ++IK+ + +
Sbjct: 160 GTVLGLIHVLGNLEDTSK-LGPAIAVAFMATFYGIATANLLWLPLANKIKANVQAETEVR 218
Query: 239 IIVKKALIAYMNGAIPQVAIE 259
+V + +++ G P + E
Sbjct: 219 RMVVEGVLSIQRGDNPMIVRE 239
>gi|307944456|ref|ZP_07659796.1| chemotaxis protein PomA [Roseibium sp. TrichSKD4]
gi|307772205|gb|EFO31426.1| chemotaxis protein PomA [Roseibium sp. TrichSKD4]
Length = 255
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 138 ARSYEIE---NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
A YE E + M+ E D+ L + + +G+S PA G++G ++G+++ + N+
Sbjct: 114 ADGYETEFIKDSMERERDLNLTRLSEGKRVMKALGDSAPAFGMIGTLVGLVQMLANM-DD 172
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST----------------RLKQHRLY 238
P +G ++ V+L TL G +LS LC PL ++ + ++++++
Sbjct: 173 PAAIGPSMAVALLTTLYGALLSNVLCLPLVEKLDAKFDVDELNQTLIIEGVLQIRENKSP 232
Query: 239 IIVKKALIAYM 249
++++ L+AY+
Sbjct: 233 ALIQEMLLAYL 243
>gi|317151981|ref|YP_004120029.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316942232|gb|ADU61283.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 253
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 128 DYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
DYMR + V I+ +++ E+ + ++ +G PA+G++G ++G+
Sbjct: 105 DYMRKGLQLTVDGLEPQTIQEILETEVSYLSERHATGADVVAVLGTLAPAMGMIGTVVGL 164
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++ + +S P +G A+ V+L TL G +L+ + NP+ ++K+ ++ L ++ +
Sbjct: 165 VQMLQTMSD-PSTIGPAMAVALLTTLYGAMLANLVFNPMAGKLKARSKEEILLREMIMEG 223
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSER 270
+++ G P++ E LP +R
Sbjct: 224 ILSISKGENPRIIEEKLNSYLPPKDR 249
>gi|258513970|ref|YP_003190192.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum acetoxidans DSM
771]
gi|257777675|gb|ACV61569.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum acetoxidans DSM
771]
Length = 260
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 26/273 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ +IG+ +L ++ GF GG+ LIQ +IV G G V ++ +K
Sbjct: 3 LAVLIGVVGGLLSLVLGFMWEGGHVGSLIQKTAALIVFGGTFGATVACFSVQDLKVIPQI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L K + D + +L +R E +++D +S +N
Sbjct: 63 LKNALTVKLPEESEIIDQI-------VDLADQARREGLLYLEDQISSM----------DN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAIGIV 178
E F+ ++++I G + N+M E +II E+ A G P +GI+
Sbjct: 106 E---FLKKGIQLVIDGTEAEL-VRNIM--ETEIISLEERNEVGASFFEAAGGFAPTMGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ +GN+ P LG I V+ TL G+ + L PL ++IK+ K+ +
Sbjct: 160 GTVMGLVHVLGNMD-DPTTLGPKIAVAFIATLYGVASANVLYLPLGAKIKNVSKKEVIIK 218
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+V + +IA G P + E L ++RP
Sbjct: 219 ELVMEGVIALQGGNNPLLIRERLNAYLNPNKRP 251
>gi|315638942|ref|ZP_07894113.1| flagellar motor protein A [Campylobacter upsaliensis JV21]
gi|315480971|gb|EFU71604.1| flagellar motor protein A [Campylobacter upsaliensis JV21]
Length = 258
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 44/266 (16%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ + + I G GGNP ++ +IV + + K++K +
Sbjct: 3 LTTILGMVLAVTSISVGDILEGGNPLHVLHFSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG-----SR-NETENHIDDPYNSTIFTSIP 114
L +F K G + + +L+ + + G SR NE EN
Sbjct: 63 LKVVF--KGSGVNLPERIAQLIEFAIVARRDGLLALESRTNEIENE-------------- 106
Query: 115 TVLENNELTTFICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
F+ + M M++ G + S EI+ EE Y++ Y + G
Sbjct: 107 ----------FLKNAMMMLVDGKSFEEIHESMEIQTEQLEE----HYKECAEYWIV--FG 150
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
E+ P +G+VGA+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+
Sbjct: 151 ETCPTMGLVGAVFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKA 209
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ + +++ +A+ GA P+
Sbjct: 210 NGMDFVKEQVVITEAIKGIAEGANPR 235
>gi|226950065|ref|YP_002805156.1| chemotaxis MotA protein [Clostridium botulinum A2 str. Kyoto]
gi|226842087|gb|ACO84753.1| chemotaxis MotA protein [Clostridium botulinum A2 str. Kyoto]
Length = 270
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 113/268 (42%), Gaps = 22/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + +I G G N + + I G L ++ P+ K V ++
Sbjct: 8 TPIGLVLCFGLVIWGMATGGSNLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVVIV 67
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F Y + + DV++ +L + +R E ++D N N
Sbjct: 68 QTFKYNGM---SNIDVIQNFV----DLSRKARREGLLSLEDAIN-------------NLT 107
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +RM++ G I ++M+ EID + + G PA G++G ++
Sbjct: 108 DDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLI 166
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ S I + +G +L T G +++ + NP+ + + + +V
Sbjct: 167 GLIQMLANLTDSSTI-ASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREMVL 225
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P++ E L +ER
Sbjct: 226 EGVLAIQSGVNPRIMEEKLVSYLSPTER 253
>gi|323341392|ref|ZP_08081636.1| flagellar motor protein A [Lactobacillus ruminis ATCC 25644]
gi|323091269|gb|EFZ33897.1| flagellar motor protein A [Lactobacillus ruminis ATCC 25644]
Length = 268
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++V A + +I +LM+ E+D + + G + P +G++GA +G+I A+GNLS
Sbjct: 127 LVVDGAEAEQIRDLMESEVDAMETRHHRMSGLFKTAGATSPTLGVMGAAIGLIGALGNLS 186
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
K LG I + T+ GI + Y + P +++++
Sbjct: 187 DINK-LGPMIASAFVATIFGIFMGYLVMMPFATRLEA 222
>gi|332981442|ref|YP_004462883.1| MotA/TolQ/ExbB proton channel [Mahella australiensis 50-1 BON]
gi|332699120|gb|AEE96061.1| MotA/TolQ/ExbB proton channel [Mahella australiensis 50-1 BON]
Length = 267
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 129 YMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+MR ++IV ++N+M+ E++ I + + + MG PA G++G ++G+I
Sbjct: 106 FMRKGILLIVDGTDPELVKNIMETELNYIEERHKQGWGLLETMGNYAPAFGMIGTLIGLI 165
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ NL+ P +G + V++T T G +L+ + P+ ++K ++ L +V + +
Sbjct: 166 NMLRNLN-DPDTIGPNMAVAITTTFYGSVLANLIFLPMAQKLKVRSAEEMLLKELVLEGV 224
Query: 246 IAYMNGAIPQVAIEYGRKVLP 266
++ G P++ E + LP
Sbjct: 225 LSIQAGENPRIIEEKLKAFLP 245
>gi|15643440|ref|NP_228484.1| motility protein A [Thermotoga maritima MSB8]
gi|4981199|gb|AAD35759.1|AE001740_5 motility protein A [Thermotoga maritima MSB8]
Length = 262
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
+ G PA G++G ++G+I+ + +L+ P+ LG ++ V+L TL G IL+ + P+
Sbjct: 146 LESAGAYAPAFGMIGTLIGLIQMLKSLN-DPETLGPSMAVALITTLYGAILANGVFLPMA 204
Query: 225 SQIKSTR---LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+IK R + + R+ + +A+++ G P++ E + LP ER + E +QE
Sbjct: 205 EKIKKRRDILVLEKRMIL---EAVLSIQAGENPRILEEKLKSFLPEKERQAYEAASQE 259
>gi|89094433|ref|ZP_01167373.1| flagellar motor protein [Oceanospirillum sp. MED92]
gi|89081325|gb|EAR60557.1| flagellar motor protein [Oceanospirillum sp. MED92]
Length = 246
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 30/259 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ-PFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
++ G+ + ++GG Y GG+ L+ P +++ G L ++ +P + ++ +
Sbjct: 3 LTAFFGVLLAFAAVLGGNYLEGGHVEELLNLPAAAIVILGT-LAAAIIQSPAQDVRRAVR 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGS---RNETENHIDDPYNSTIFTSIPTV 116
L FG QD + +++ + +KG E E DP+ + + +
Sbjct: 62 LLGWAFGRN--NQDFKGSIDRIVQWCVVARRKGLLALEKEAEKE-SDPF---VKAGLLLL 115
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
++ D +R + E+E + E+ D L+ I MG P +G
Sbjct: 116 VDGKG-----ADVIR-------GTLEVELITAEQRD------LQGAKVIESMGGYAPTLG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA+LG+I M NLS P LG I + T+ GI L+ P+ ++IK+ L +++
Sbjct: 158 IIGAVLGLIHVMSNLS-DPDSLGAGIATAFVATIYGIGLANLFLIPVANKIKNLVLVRYQ 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
+V + L+ G P+
Sbjct: 217 YQEMVLEGLMFIAEGQNPK 235
>gi|187919310|ref|YP_001888341.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187717748|gb|ACD18971.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 254
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G + I+ GF GG+ L Q VIV G G ++ N D G+ L
Sbjct: 5 TLFGAVFGVTAIVAGFSLEGGHFTSLFQLEAFVIVLGGTFGAVMIQNTWARFFD-GIKQL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ KA D + L +L L+ G + + + +F SI E +
Sbjct: 64 RLAFVKARQVDR--ESLSVL------LEWGDQAKLNGML-------VFESI----EAGGI 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F + ++ G + + +E+ + E+D + G P GI+GA+L
Sbjct: 105 NPFAKRGLELLANGVSTAV-LEDALQRELDAYERNHMLAARIWQQAGGYAPTFGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRLYI 239
G+I+ G++ + P LG I V+ TL G+ L+ + PL +I++ + L+ RLY+
Sbjct: 164 GLIQVTGHMLE-PAQLGQGIAVAFVATLYGLALANLVFLPLYGKIRAQVDSELRFRRLYL 222
>gi|330828821|ref|YP_004391773.1| MotA/TolQ/ExbB proton channel [Aeromonas veronii B565]
gi|328803957|gb|AEB49156.1| MotA/TolQ/ExbB proton channel [Aeromonas veronii B565]
Length = 245
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 34/214 (15%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ L+ +IV G +G + P K I + LL IF QD +L
Sbjct: 21 GGSLLTLVDGPAFLIVLGGTVGAVTLQTPAKYILLALRQLLWIF--TPPHQDLATQAERL 78
Query: 82 LYILMYNLKKGS---RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
++ ++G N+ E+ D+ F + MI+ G
Sbjct: 79 QSWAVFARQQGLLALENQAEHEEDN---------------------FTRQGLGMIVDG-V 116
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHA---ISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
+ +I L++ +IDI E+ + HA MG P IGI+GA+LG+I+AM +L + P
Sbjct: 117 STEDIRMLLEADIDI---EQERNEHAARVFEAMGGYSPTIGIIGAVLGLIQAMFHL-EDP 172
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
LG I V+ T+ G+ + + P+ +++++
Sbjct: 173 SALGAGIAVAFVATIYGVGFANLIYLPIANRLRA 206
>gi|289667243|ref|ZP_06488318.1| flagellar motor protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 246
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + N+++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPEAMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ M NL+ P +LG I + T T+ GI + L P+ +Q+KS +V +
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAQLKSVIHCSTNEREMVIE 223
Query: 244 ALIAYMNGAIPQ 255
LIA G P+
Sbjct: 224 GLIAIAQGENPR 235
>gi|283955186|ref|ZP_06372688.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 414]
gi|283793399|gb|EFC32166.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 414]
Length = 258
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 32/260 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + A K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTATHKKIVKAAYKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G + + +L+ + + G S +EN
Sbjct: 63 LKIVF--KGSGVNLPERIAQLIEFAIIARRDGL--------------LALESKTGEIENE 106
Query: 121 ELTTFICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
F+ M M++ G + S EI+ EE Y++ Y + GE+ P +
Sbjct: 107 ----FLKSAMMMLVDGKSFEEIHESMEIQTEQLEE----HYKECAEYWIV--FGETCPTM 156
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G+VGA+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ +
Sbjct: 157 GLVGAVFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLV 215
Query: 236 RLYIIVKKALIAYMNGAIPQ 255
+ I++ +A+ GA P+
Sbjct: 216 KEQIVITEAIKGIAEGANPR 235
>gi|254500652|ref|ZP_05112803.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
gi|222436723|gb|EEE43402.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
Length = 255
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
Query: 138 ARSYEIE---NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
A YE+E M+ E D+ L + + +G+S PA G++G ++G+++ + N+
Sbjct: 114 ADGYELEFIKEAMERERDLQLSRLSEGKRVMKALGDSAPAFGMIGTLVGLVQMLANM-DD 172
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST----------------RLKQHRLY 238
P +G ++ V+L TL G ++S LC P+ ++ + ++++ +
Sbjct: 173 PAAIGPSMAVALLTTLYGALISNILCLPMVDKLDAKFDVDELNQTLIIDGVCQIRESKSP 232
Query: 239 IIVKKALIAYM 249
++K+ L+AY+
Sbjct: 233 ALIKEMLVAYL 243
>gi|302670730|ref|YP_003830690.1| flagellar motor protein MotA [Butyrivibrio proteoclasticus B316]
gi|302395203|gb|ADL34108.1| flagellar motor protein MotA [Butyrivibrio proteoclasticus B316]
Length = 267
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+IV ++++++ EID + Y + P+ G++G +LG++ + N+S
Sbjct: 116 LIVDGTEPELVKSILEAEIDAMSERHKSNYSFFGDLAGMGPSWGMIGTLLGLVLMLQNMS 175
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
P +G ++ V+L T G +L+ C P +++K+ ++ IV + L++ G
Sbjct: 176 D-PSSIGPSMAVALITTFYGSVLANWFCYPAENKLKARDNAEYMAKSIVIEGLLSIQAGE 234
Query: 253 IPQVAIEYGRKVLPLSERPSIE 274
P+V E + L ++R + E
Sbjct: 235 NPRVTEEKLKSFLSPADRAAYE 256
>gi|148269400|ref|YP_001243860.1| MotA/TolQ/ExbB proton channel [Thermotoga petrophila RKU-1]
gi|170288057|ref|YP_001738295.1| MotA/TolQ/ExbB proton channel [Thermotoga sp. RQ2]
gi|281411903|ref|YP_003345982.1| MotA/TolQ/ExbB proton channel [Thermotoga naphthophila RKU-10]
gi|147734944|gb|ABQ46284.1| MotA/TolQ/ExbB proton channel [Thermotoga petrophila RKU-1]
gi|170175560|gb|ACB08612.1| MotA/TolQ/ExbB proton channel [Thermotoga sp. RQ2]
gi|281373006|gb|ADA66568.1| MotA/TolQ/ExbB proton channel [Thermotoga naphthophila RKU-10]
Length = 262
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
+ G PA G++G ++G+I+ + +L+ +P+ LG ++ V+L TL G +L+ + P+
Sbjct: 146 LESAGAYAPAFGMIGTLIGLIQMLKSLN-NPETLGPSMAVALITTLYGAVLANGVFLPMA 204
Query: 225 SQIKSTR---LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+IK R + + R+ + +A+++ G P++ E + LP ER + E +QE
Sbjct: 205 EKIKKRRDILVLEKRMIL---EAVLSIQAGENPRILEEKLKSFLPEKERQAYEAASQE 259
>gi|220934516|ref|YP_002513415.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219995826|gb|ACL72428.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 246
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + ++ IIGG A G L VIV + +M LKV + L
Sbjct: 5 SLIGVLLALVAIIGGSIAKGSGLEALWNAAAFVIVVVGTIAAALMQTRLKVFMHA----L 60
Query: 63 EIFGYKALGQ--DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+IF + + DT + KL+ N + +R E ++ L
Sbjct: 61 KIFPWVFMAPRIDTEAAIEKLV-----NWSQIARKEGLLGLE-------------TLAEQ 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F +++++ G I N+++ +++ L+ MG P +GI+GA
Sbjct: 103 EPDAFSAKGLQLLVDGT-EPEAIRNILEVDLNTREQFDLQGAKVYESMGVYAPTLGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M NL+ P LG I + T+ GI + P+ +++K+T Q +
Sbjct: 162 VMGLMAVMQNLA-DPSRLGAGIAAAFVATIYGIASANLFFLPVGNKLKNTVQSQSAYREM 220
Query: 241 VKKALIAYMNGAIPQ 255
+ +I+ G P+
Sbjct: 221 IIDGIISIAEGENPR 235
>gi|253998498|ref|YP_003050561.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313200584|ref|YP_004039242.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253985177|gb|ACT50034.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312439900|gb|ADQ84006.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 246
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL----PAI 175
NE FI +R++I G A +I + IDI YE Y + + + +S P I
Sbjct: 102 NETDPFIKKGLRLLIDGIAAD-KIREIC--AIDIYYYES--QYRSAAKIWDSAGGYAPTI 156
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GI+GA+LG+I M NLS P LG+ I V+ T+ G+ L+ + P+ S++K+ L++
Sbjct: 157 GILGAVLGLIHVMENLS-DPSRLGSGIAVAFVATIYGVGLANIVFLPIGSKLKAYVLQEA 215
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
++ A ++ G +V E
Sbjct: 216 SRREMLMNAWVSIAQGDHTRVVEE 239
>gi|229062195|ref|ZP_04199518.1| hypothetical protein bcere0026_42660 [Bacillus cereus AH603]
gi|228717089|gb|EEL68767.1| hypothetical protein bcere0026_42660 [Bacillus cereus AH603]
Length = 266
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIDK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|78356760|ref|YP_388209.1| chemotaxis protein PomA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219165|gb|ABB38514.1| chemotaxis protein PomA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 251
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 35/273 (12%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
TIIG+ I IIG G + P V+V G FVM P+K + S +
Sbjct: 5 TIIGIVGAIGLIIGAIVMGSGLGGFIDIPSVAVVVGGTIAVAFVMF-PIKTVLSSIKVAM 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET-----ENHIDDPYNSTIFTSIPTVL 117
+ F KA D + +++ +L + +R E+ + +DDPY
Sbjct: 64 KCFFAKA--PDPVESIQQII-----SLAEKARKESLVALEKVSVDDPY------------ 104
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+ ++++ G S + ++M+ +I I+ + +G PA G+
Sbjct: 105 --------LKRGVQLVADGTEESL-VRSVMEIDISIMKQRHRRGQEVFKGLGTYAPAFGM 155
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+++ + NLS P +G A+ V+L T G +L+ P+ +++ ++
Sbjct: 156 IGTLVGLVQMLQNLSD-PASIGPAMAVALLTTFYGAVLANVFFLPMAKRLEERSNEEAHN 214
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +NG P + E LP S+R
Sbjct: 215 MELTMEGVLSILNGDHPSIVREKLESFLPPSQR 247
>gi|120554887|ref|YP_959238.1| flagellar motor protein [Marinobacter aquaeolei VT8]
gi|120324736|gb|ABM19051.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 246
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++V A I ++M+ +++ L+ MG P IGI+GA++G+I+ M NL
Sbjct: 114 LLVDGAEPESIRSIMEVDLETREQRDLESARVYEAMGGYSPTIGIIGAVMGLIQVMTNL- 172
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ P+ LG I + T+ G+ L+ L P+ ++++ ++ R ++ +IA G
Sbjct: 173 EDPQSLGGGIATAFVATIYGVALANLLFFPVANKLRGIIKERTRYEDMMIDGIIAIAEGE 232
Query: 253 IPQ 255
P+
Sbjct: 233 NPK 235
>gi|225375332|ref|ZP_03752553.1| hypothetical protein ROSEINA2194_00957 [Roseburia inulinivorans DSM
16841]
gi|225212821|gb|EEG95175.1| hypothetical protein ROSEINA2194_00957 [Roseburia inulinivorans DSM
16841]
Length = 266
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 115/265 (43%), Gaps = 38/265 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYI--LIQPFEIVIVAGAGLGGFVMANPLKVIKD-- 56
++++ G+ + + + G ++ GG + ++ I+I G + G + A+ L +
Sbjct: 3 IASLAGIILGAVMFVFGVFSNGGFEALKNMVDSASIIITVGGSISGVLAAHKLPDFINGL 62
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIP 114
G++L +K +D + K++ + K+G + E N I+D
Sbjct: 63 KGITLT----FKEKAEDPAETIKKIIDLSNVARKEGLLALEEAANDIED----------- 107
Query: 115 TVLENNELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES 171
D+M+ M++V + +M+ + + K E
Sbjct: 108 -------------DFMKKGVMLVVDGTDPELVRGIMETSLSCMEERHKKVIAFWEKWAEL 154
Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
PA G++G ++G+I + NL + I G A+ V+L TL G +++ LCNP S++K
Sbjct: 155 GPAWGMIGTLIGLINMLKNLEDASSI-GPAMSVALVTTLYGSLIANWLCNPTASKLKVNN 213
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQV 256
++ + ++ + L++ G P+V
Sbjct: 214 EREVAIKEMIVEGLLSIQAGENPRV 238
>gi|157364673|ref|YP_001471440.1| MotA/TolQ/ExbB proton channel [Thermotoga lettingae TMO]
gi|157315277|gb|ABV34376.1| MotA/TolQ/ExbB proton channel [Thermotoga lettingae TMO]
Length = 262
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 123/286 (43%), Gaps = 34/286 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+F+ I+ G A + + + I G + + ++P K+
Sbjct: 3 ISTILGIFMAFGMIVFGIIANKSSLGVYYNLPSLFITIGGAIASTIASHP----KEKSFK 58
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN------ETENHIDDPYNSTIFTSIP 114
++++ + ++ D + L+ L+ +K R E N I+DP
Sbjct: 59 IIQVM--MSTFKEPKIDNVGLVRTLVSFSEKARREGLLSLEENLNEIEDP---------- 106
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
F+ ++++I G ++N+M+ E+D+I + + G PA
Sbjct: 107 ----------FMKKALQLVIDGTDPDL-LKNMMETEMDLIEEDLAGEKALMDSAGAYAPA 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G++G ++G+I + L+ +P+ LG + V+L T G ILS ++ P+ +I K
Sbjct: 156 YGMIGTLIGLIAMLKTLN-NPETLGPGMSVALITTFYGSILSNAVFLPMGEKIGKRAAKI 214
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
R ++ + +++ G P+V E + L E+ E QE
Sbjct: 215 LRQKQMILEGVLSIQAGENPRVLEEKLKSFLTNQEKVVYEAAIQEA 260
>gi|229019730|ref|ZP_04176536.1| hypothetical protein bcere0030_42310 [Bacillus cereus AH1273]
gi|229025956|ref|ZP_04182346.1| hypothetical protein bcere0029_42440 [Bacillus cereus AH1272]
gi|228735357|gb|EEL85962.1| hypothetical protein bcere0029_42440 [Bacillus cereus AH1272]
gi|228741575|gb|EEL91769.1| hypothetical protein bcere0030_42310 [Bacillus cereus AH1273]
Length = 266
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|229135344|ref|ZP_04264135.1| hypothetical protein bcere0014_42410 [Bacillus cereus BDRD-ST196]
gi|229169238|ref|ZP_04296951.1| hypothetical protein bcere0007_41890 [Bacillus cereus AH621]
gi|228614221|gb|EEK71333.1| hypothetical protein bcere0007_41890 [Bacillus cereus AH621]
gi|228648119|gb|EEL04163.1| hypothetical protein bcere0014_42410 [Bacillus cereus BDRD-ST196]
Length = 266
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|229175220|ref|ZP_04302736.1| hypothetical protein bcere0006_43010 [Bacillus cereus MM3]
gi|228608356|gb|EEK65662.1| hypothetical protein bcere0006_43010 [Bacillus cereus MM3]
Length = 266
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|229013712|ref|ZP_04170841.1| hypothetical protein bmyco0001_41210 [Bacillus mycoides DSM 2048]
gi|228747634|gb|EEL97508.1| hypothetical protein bmyco0001_41210 [Bacillus mycoides DSM 2048]
Length = 266
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|163942244|ref|YP_001647128.1| flagellar motor protein MotA [Bacillus weihenstephanensis KBAB4]
gi|163864441|gb|ABY45500.1| MotA/TolQ/ExbB proton channel [Bacillus weihenstephanensis KBAB4]
Length = 264
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 148 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 206
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 207 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|310659035|ref|YP_003936756.1| ytxd [Clostridium sticklandii DSM 519]
gi|308825813|emb|CBH21851.1| YtxD [Clostridium sticklandii]
Length = 260
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ ++ II + G+ + P I+IV G L ++A P+ +KD
Sbjct: 3 LSTIIGIVSGLILIIVSIM-LNGSIGAFLDPASIMIVVGGTLAATLVAFPIPQVKD---- 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L Q T+ + + + ++ N I N + ++ E
Sbjct: 58 ------IIKLTQKTFAN------------RDSNPSKIINDIITLANKARKEGLLSLEEAT 99
Query: 121 E-LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
E L M++V + NL++ E+D I M + P G++G
Sbjct: 100 EALDDEFLKKGLMLVVDGTDPELVRNLLETELDFIEQRHKAGQGLFESMATAAPGFGMIG 159
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+I +G+L P +G ++ V+L TL G +++ P+ +++K ++
Sbjct: 160 TLIGLINMLGSL-DDPSTIGPSMSVALITTLYGSLIANLFFTPMANKLKVKSGEEILERE 218
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + L++ G P++ E + LP S R
Sbjct: 219 IMVEGLLSIQAGENPRIIEEKLKAFLPPSMR 249
>gi|325567536|ref|ZP_08144203.1| chemotaxis protein MotA [Enterococcus casseliflavus ATCC 12755]
gi|325158969|gb|EGC71115.1| chemotaxis protein MotA [Enterococcus casseliflavus ATCC 12755]
Length = 254
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIVGAILG 183
F+ + M++ G A + +I+ +M+ EI I E+ + AI G S P +G++GA++G
Sbjct: 107 FLKKGLEMVVDGIA-AEQIQEIMENEIYGI-EERHRIGSAIFKTAGTSSPTLGVLGAVIG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I A+GNL + + LG I + TL GI Y L P +S++ ++ ++ I+ +
Sbjct: 165 LIGALGNL-EDVEALGHMISAAFVATLYGIFFGYVLFIPFSSRLTLKSEQEVQMMSIIVE 223
Query: 244 ALIAYMNGAIPQ 255
++A G P+
Sbjct: 224 GVLAIQAGQSPK 235
>gi|229032157|ref|ZP_04188133.1| hypothetical protein bcere0028_41990 [Bacillus cereus AH1271]
gi|228729163|gb|EEL80163.1| hypothetical protein bcere0028_41990 [Bacillus cereus AH1271]
Length = 266
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|150016470|ref|YP_001308724.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
gi|149902935|gb|ABR33768.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
Length = 257
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 21/226 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
TI+ + +CII GF GG P L+QP +IV G LG ++ P +K L
Sbjct: 5 TILSVLFAFICIIVGFIIEGGKPIALLQPTAAMIVIGGTLGAVGISFPSSTLKKFPKVLS 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
F K + Y D K + + K R+ S+ + L ++ L
Sbjct: 65 IAFKKKEIDLKGYIDYFKGVSL------KTRRDG-------------LLSLESELTDDAL 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ ++M++ G S ++++++ +++ + + G P +GIVG I
Sbjct: 106 DPFVKKGLQMVVDGIDPS-SVKSILNTKLEQLSTRHENCIEMFTSAGGYAPTMGIVGTIT 164
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
++ + LS +G I V+ TL G+ + P+ S+++
Sbjct: 165 SLVIILSALSDVAA-MGEKIAVAFVATLYGLATANLFWLPIASKLR 209
>gi|152990730|ref|YP_001356452.1| flagellar motor protein MotA [Nitratiruptor sp. SB155-2]
gi|151422591|dbj|BAF70095.1| flagellar motor protein MotA [Nitratiruptor sp. SB155-2]
Length = 252
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 47/237 (19%)
Query: 1 MSTIIGLFITILCIIGGFYAM-------GGNPYILIQPFEIVIVAGAGLGGFVMANPLKV 53
+ T+IGL GG +A+ GG+P I I+IV G G + A PLK
Sbjct: 3 LGTLIGL--------GGAWALVIISIVLGGSPGAFINGPSILIVIGGGFAAALAAFPLKD 54
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN---ETENHIDDPYNSTIF 110
+ ++ ++F + T + L L+ L+ KK + E ID Y
Sbjct: 55 FLNGVKAIKKVF------KPTVPEPLDLIDFLVDATKKARKEGILALEGDIDQFY----- 103
Query: 111 TSIPTVLENNELTTFICDYMRMIIVG-NARSYE--IENLMDEEIDIILYEKLKPYHAISH 167
E + + MRM+I G N E EN + +E D L ++K + +
Sbjct: 104 ----------ERDKILGNLMRMLIDGQNIEDIEANFENAIAQE-DSQLDTEIKVWDS--- 149
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
+GE PA+G++G ++G+I+ + NLS P LG + V++ TL G IL+ LC P+
Sbjct: 150 LGELFPALGMIGTLIGLIQMLQNLS-DPAALGPGMAVAMITTLYGAILANILCIPIA 205
>gi|150019640|ref|YP_001311894.1| flagellar motor protein MotA [Clostridium beijerinckii NCIMB 8052]
gi|149906105|gb|ABR36938.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
Length = 261
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 117/259 (45%), Gaps = 35/259 (13%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IGL ++ ++ G + +L+ I+++ +GG V+A K L +
Sbjct: 6 VIGLIGGLVIVVAAMLEKGASLQVLMSAEAILVI----IGGTVIALLNSFPKGEFTKLPK 61
Query: 64 IFG--YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IFG + A GQ+ +++ L + ++ E+ I LEN
Sbjct: 62 IFGVLFSAKGQEDPAEIIAQLVEMSQTTRRDGLLSLESTIQG-------------LENK- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH-----AISHMGESLPAIG 176
F+ + M++ G +E + +E+ I E ++ H A + G + P +G
Sbjct: 108 ---FMKKGLEMVVDG------LEPDLIKEVLEIEIESMEERHRLGATAFTTAGGTAPTLG 158
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++GA++G+I A+GNL+ K LG +I + T+ GI Y + +P +++K ++ +
Sbjct: 159 VLGAVIGLIGALGNLNDIEK-LGESIKSAFVATVYGIFTGYLIWHPFANRLKRKSQEEIK 217
Query: 237 LYIIVKKALIAYMNGAIPQ 255
I+ + ++A G P+
Sbjct: 218 NMNIMLEGILAIQAGNNPK 236
>gi|323700141|ref|ZP_08112053.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323460073|gb|EGB15938.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 253
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 128 DYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
DYMR + V I+ +++ EI + +S +G PA+G++G ++G+
Sbjct: 105 DYMRKGLQLTVDGLEPQTIQEILETEISYLAERHATGADVVSALGTLAPAMGMIGTVIGL 164
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++ + +S P +G A+ V+L TL G I++ + P+ ++K+ ++ L ++ +
Sbjct: 165 VQMLQTMSD-PSSIGPAMAVALLTTLYGAIIANLVLMPMAGKLKARSKEEVLLREMIMEG 223
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSER 270
+++ G P++ E LP +R
Sbjct: 224 ILSISKGENPRIIEEKLNSYLPPKDR 249
>gi|308273522|emb|CBX30124.1| Uncharacterized 29.3 kDa protein in ccpA 3'region [uncultured
Desulfobacterium sp.]
Length = 249
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 3/130 (2%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EI+N+++ EID I MG PA+G++G ++G+I+ + ++ KI G +
Sbjct: 122 EIKNILETEIDFIRSRHSLGAEIFVTMGTYAPALGMIGTLIGLIQMLQSMDDPGKI-GPS 180
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI-IVKKALIAYMNGAIPQVAIEY 260
+ V+L T G I++ +C P+ +++ TR K+ L ++ + +I+ NG P++ E
Sbjct: 181 MSVALVTTFYGSIMANIICLPIAGKLR-TRSKEEILSKEMMIQGVISLSNGDNPRILEER 239
Query: 261 GRKVLPLSER 270
+ +P R
Sbjct: 240 LKVFVPGGRR 249
>gi|170741246|ref|YP_001769901.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
gi|168195520|gb|ACA17467.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
Length = 257
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 112 SIPTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEID---IILYEKLKPYHAISH 167
S P LEN E++ F+ +R I G R + I + M+ + D + L E K Y A
Sbjct: 92 SGPMALENMEISDPFLAQGVRYIADGYDRDF-IRDTMERDRDNFLMHLEEGSKVYRAF-- 148
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
G+ PA G++G ILG++ N+S P LG A+ +L TL G +++ + P+ ++
Sbjct: 149 -GDCAPAWGMIGTILGMVSMFANMSD-PSKLGPAMATALLATLYGALIANMITLPIADKL 206
>gi|257866374|ref|ZP_05646027.1| flagellar motor protein MotA [Enterococcus casseliflavus EC30]
gi|257873110|ref|ZP_05652763.1| flagellar motor protein MotA [Enterococcus casseliflavus EC10]
gi|257875986|ref|ZP_05655639.1| flagellar motor protein MotA [Enterococcus casseliflavus EC20]
gi|257800332|gb|EEV29360.1| flagellar motor protein MotA [Enterococcus casseliflavus EC30]
gi|257807274|gb|EEV36096.1| flagellar motor protein MotA [Enterococcus casseliflavus EC10]
gi|257810152|gb|EEV38972.1| flagellar motor protein MotA [Enterococcus casseliflavus EC20]
Length = 264
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIVGAILG 183
F+ + M++ G A + +I+ +M+ EI I E+ + AI G S P +G++GA++G
Sbjct: 117 FLKKGLEMVVDGIA-AEQIQEIMENEIYGI-EERHRIGSAIFKTAGTSSPTLGVLGAVIG 174
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I A+GNL + + LG I + TL GI Y L P +S++ ++ ++ I+ +
Sbjct: 175 LIGALGNL-EDVEALGHMISAAFVATLYGIFFGYVLFIPFSSRLTLKSEQEVQMMSIIVE 233
Query: 244 ALIAYMNGAIPQ 255
++A G P+
Sbjct: 234 GVLAIQAGQSPK 245
>gi|88858086|ref|ZP_01132728.1| putative Chemotaxis motA protein [Pseudoalteromonas tunicata D2]
gi|88819703|gb|EAR29516.1| putative Chemotaxis motA protein [Pseudoalteromonas tunicata D2]
Length = 255
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 58/271 (21%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP-------LKVIK 55
+ G+ I +L I G+ GG LI ++IV G LG ++ +P LK+ K
Sbjct: 5 SFFGILIALLAIGIGYKIEGGLVASLINFPALLIVLGGTLGAVMLQSPSAQFFCGLKMFK 64
Query: 56 ----------DSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPY 105
D G+S ++ + KA QD Y +L+K + E+ I+
Sbjct: 65 WVFVPPKHRVDEGISKIKNWSQKAR-QDGYL-----------SLEKEALASKEHFINKGL 112
Query: 106 NSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI 165
N +++ E F + EIE L E L + K Y A
Sbjct: 113 N--------MLIDGVEAEQF------------RSAMEIELLFQRES---LLKSAKIYEA- 148
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
MG P IGI+GA+LG+I+AM + Q P++LG I + T+ G+ + L P+ +
Sbjct: 149 --MGGYSPTIGILGAVLGLIQAMSFIKQ-PEMLGAGIATAFIATIYGVGFANLLFLPIAN 205
Query: 226 QIKSTRLKQHRLY-IIVKKALIAYMNGAIPQ 255
+++ ++Q LY ++ + ++A + G P
Sbjct: 206 KLRFL-IEQKMLYNELLAEGMLAILQGDTPH 235
>gi|257871285|ref|ZP_05650938.1| flagellar motor protein MotA [Enterococcus gallinarum EG2]
gi|257805449|gb|EEV34271.1| flagellar motor protein MotA [Enterococcus gallinarum EG2]
Length = 254
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + M++ G A + +I+ +M+ EI I G S P +G++GA++G+
Sbjct: 107 FLRKGLEMVVDGIA-AEQIQEIMENEIYGIEERHRIGSSIFKTAGTSSPTLGVLGAVIGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I A+GNL + + LG I + TL GI Y L P +S++ ++ ++ I+ +
Sbjct: 166 IGALGNL-EDVEALGHMISAAFVATLYGIFFGYVLFIPFSSRLSLKSEQEVQMMSIIVEG 224
Query: 245 LIAYMNGAIPQ 255
++A G P+
Sbjct: 225 VLAIQAGQSPK 235
>gi|313902671|ref|ZP_07836070.1| MotA/TolQ/ExbB proton channel [Thermaerobacter subterraneus DSM
13965]
gi|313467109|gb|EFR62624.1| MotA/TolQ/ExbB proton channel [Thermaerobacter subterraneus DSM
13965]
Length = 284
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 24/182 (13%)
Query: 80 KLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
KL+ + ++G S E ++DDP F ++ +I G
Sbjct: 80 KLVSLAQQARREGLLSLEEERKNLDDP--------------------FFAKGLQFVIDG- 118
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
A +E +M+ + L + G P +GI+G +LG+I +GNL +
Sbjct: 119 ADPEMVEEVMENALQAEQRHYLVAAGVLETAGGYAPTMGIIGTVLGLIHVLGNLEDTSS- 177
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
LG AI V+ T GI + L PL S+IK+ + L +V + +++ NG P +
Sbjct: 178 LGPAIAVAFMATFYGIASANLLWLPLASKIKANVQAEAELRRMVVEGILSIQNGDNPMIV 237
Query: 258 IE 259
E
Sbjct: 238 RE 239
>gi|229525507|ref|ZP_04414912.1| Flagellar motor rotation protein MotA [Vibrio cholerae bv. albensis
VL426]
gi|262191490|ref|ZP_06049675.1| Flagellar motor rotation protein MotA [Vibrio cholerae CT 5369-93]
gi|229339088|gb|EEO04105.1| Flagellar motor rotation protein MotA [Vibrio cholerae bv. albensis
VL426]
gi|262032638|gb|EEY51191.1| Flagellar motor rotation protein MotA [Vibrio cholerae CT 5369-93]
Length = 254
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 152 DIILYEKL--KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
DI+L ++ K G+ PA+G++G ++G++ + N+ PK +G A+ V+L T
Sbjct: 128 DIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMD-DPKSIGPAMAVALLTT 186
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
L G ILS + P+ ++ R ++ ++ ++A +G P+V Y + L S+
Sbjct: 187 LYGAILSNMVFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNASK 246
Query: 270 R 270
R
Sbjct: 247 R 247
>gi|253996641|ref|YP_003048705.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253983320|gb|ACT48178.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 249
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 40/266 (15%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + II G GGN L+Q +IV G ++ P K
Sbjct: 5 SLIGLILAVAGIILGQKLEGGNVGSLLQYAAFLIVMFGTFGAVLVQTPAK---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI----DDPYNSTIFTSIPTVLE 118
T+ LK+L L++ + E I + IF P +
Sbjct: 55 -----------TFIQGLKMLK-LVFKKPIDDKKELSKRILIWSNFARKEGIFMLEPFL-- 100
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE-KLKPYHAI-SHMGESLPAIG 176
E FI MR++I G +I + IDI +E +++ I G P +G
Sbjct: 101 KKETDPFIIKGMRLMIDGTPPE-KIREIC--AIDIYFHEVQMRSAAKIWDAAGGYAPTVG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLK 233
I+GA+LG+I M NLS P LG+ I V+ T+ G+ + + P+ +++K+ LK
Sbjct: 158 ILGAVLGLIHVMENLS-DPSKLGSGIAVAFVATIYGVGFANLIFLPIANKLKTYIQAELK 216
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIE 259
+ + + A ++ NG P++ E
Sbjct: 217 RREMLL---NAWVSIANGDHPRIVEE 239
>gi|90406797|ref|ZP_01214989.1| flagellar motor protein [Psychromonas sp. CNPT3]
gi|90312034|gb|EAS40127.1| flagellar motor protein [Psychromonas sp. CNPT3]
Length = 250
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N L F + M++ G ++ ++ ++ID+ + MG P IGI+
Sbjct: 101 NESLDEFTSKALSMLVDG-CEPLVLQEILQQDIDLESEHYERSAQIYESMGGYSPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
GA++G+I+AMG LS+ P LG I V+ T+ G+ + + P+ ++I+
Sbjct: 160 GAVMGLIQAMGYLSE-PDKLGAGIAVAFVATIYGVGFANFIFLPIANKIR 208
>gi|310644266|ref|YP_003949025.1| mota/tolq/exbb proton channel [Paenibacillus polymyxa SC2]
gi|309249217|gb|ADO58784.1| MotA/TolQ/ExbB proton channel [Paenibacillus polymyxa SC2]
Length = 275
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 95 NETENHIDDPYNSTIFTSIPTVLENNELTT-----FICDYMRMIIVGNARSYEIENLMDE 149
N TE +I+D + + VL +++ F+ + ++++I G + +I+ +++
Sbjct: 72 NPTEQYIEDLVSMAATSRRSGVLALERISSEHPNAFLREGLQLVIDGTEQE-QIKQILEL 130
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
E+D I ++ G P +GI+G ++G+I +G+L++ P LG +I V+ T
Sbjct: 131 ELDAIEHKHEGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSLTE-PTALGPSIAVAFIAT 189
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
L G+ + + P+ S+I++ + ++ + ++A NG P++
Sbjct: 190 LYGVASANLIFLPIASKIRAASESEIITMDLLLQGILAIQNGENPKL 236
>gi|229141243|ref|ZP_04269782.1| hypothetical protein bcere0013_43360 [Bacillus cereus BDRD-ST26]
gi|229198661|ref|ZP_04325362.1| hypothetical protein bcere0001_41870 [Bacillus cereus m1293]
gi|228584820|gb|EEK42937.1| hypothetical protein bcere0001_41870 [Bacillus cereus m1293]
gi|228642284|gb|EEK98576.1| hypothetical protein bcere0013_43360 [Bacillus cereus BDRD-ST26]
Length = 266
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYILWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|220927722|ref|YP_002504631.1| MotA/TolQ/ExbB proton channel [Clostridium cellulolyticum H10]
gi|219998050|gb|ACL74651.1| MotA/TolQ/ExbB proton channel [Clostridium cellulolyticum H10]
Length = 266
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD--SGVSLLEIFGYKALGQDTY-- 75
GGN L++ +IV G G G ++A PL IK S +++L I Q Y
Sbjct: 22 EEGGNLGALLKIGPFLIVFGGGFGATLVAFPLSEIKKMLSTINMLFI-------QKKYNE 74
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
D++ L L +K E N I + V++ E T I D +
Sbjct: 75 IDIINELADLSEKARKDGLLSLEQDAQTNKNELIRKGLALVVDGIE-TEVIKDIL----- 128
Query: 136 GNARSYEIENLMDEEIDIILYEK-LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
AR E++ EEI YE +K + A MG + PA+G+ G ++G+I + +LS S
Sbjct: 129 --ARETELQ----EEI----YESGVKIFEA---MGGTWPAMGVCGTVMGMISILKDLSDS 175
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
LG I + T+LG+ + + P ++IKS ++ + I+ + L++ G P
Sbjct: 176 DA-LGPKISGAFIATMLGVGTANLIWLPFGTKIKSKAARETMINEIIIEGLLSIQAGENP 234
Query: 255 QVAIE 259
++ E
Sbjct: 235 RIIKE 239
>gi|261252276|ref|ZP_05944849.1| Flagellar motor rotation protein MotA [Vibrio orientalis CIP
102891]
gi|260935667|gb|EEX91656.1| Flagellar motor rotation protein MotA [Vibrio orientalis CIP
102891]
Length = 254
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 152 DIILYEKLKPY--HAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
DI+L ++ + G+ PA+G++G ++G++ + N+ PK +G A+ V+L T
Sbjct: 128 DIVLTDERHDFGGSVFRAFGDVAPAMGMIGTLVGLVAMLSNMD-DPKAIGPAMAVALLTT 186
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLS 268
L G ILS + P+ ++ S R +Q +L +V ++A +G P+V Y + L
Sbjct: 187 LYGAILSNMVFFPIADKL-SLRREQEKLNRRLVMDGVLAIQDGQNPRVIDSYLKNYLNEG 245
Query: 269 ER 270
+R
Sbjct: 246 KR 247
>gi|32266000|ref|NP_860032.1| flagellar motor protein MotA [Helicobacter hepaticus ATCC 51449]
gi|32262049|gb|AAP77098.1| flagellar motor component MotA [Helicobacter hepaticus ATCC 51449]
Length = 256
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH-AISHM----GESLPAIGIVG 179
F+ + MII G ++ + M+ +I E L+ Y+ SH E+ P +G+VG
Sbjct: 107 FLRQSLSMIIDGR-DAHAVREDMEVQI-----ESLEEYYKGCSHFWILYAETCPTMGLVG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++G++ A+ L PK + I + T T+ GI SY+L P ++ S R +
Sbjct: 161 AVMGLMLAL-QLLDDPKAMAAGIAGAFTATVTGIFCSYALFGPWGHKMHSKSADIIRGRM 219
Query: 240 IVKKALIAYMNGAIPQ 255
+V + ++ NG P+
Sbjct: 220 VVLEGVVGIANGDNPR 235
>gi|42783686|ref|NP_980933.1| flagellar motor protein MotA [Bacillus cereus ATCC 10987]
gi|42739615|gb|AAS43541.1| chemotaxis protein MotA [Bacillus cereus ATCC 10987]
Length = 264
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 148 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYILWHPFA 206
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 207 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|206977759|ref|ZP_03238650.1| chemotaxis protein MotA [Bacillus cereus H3081.97]
gi|217961996|ref|YP_002340566.1| flagellar motor protein MotA [Bacillus cereus AH187]
gi|222097979|ref|YP_002532036.1| flagellar motor protein mota [Bacillus cereus Q1]
gi|206744060|gb|EDZ55476.1| chemotaxis protein MotA [Bacillus cereus H3081.97]
gi|217066364|gb|ACJ80614.1| chemotaxis protein MotA [Bacillus cereus AH187]
gi|221242037|gb|ACM14747.1| chemotaxis protein (motility protein A) [Bacillus cereus Q1]
gi|324328405|gb|ADY23665.1| flagellar motor protein MotA [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 264
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 148 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYILWHPFA 206
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + L++ RL I L+ G P + L +ER +E A++
Sbjct: 207 NKLKQKSAAELEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|296134256|ref|YP_003641503.1| MotA/TolQ/ExbB proton channel [Thermincola sp. JR]
gi|296032834|gb|ADG83602.1| MotA/TolQ/ExbB proton channel [Thermincola potens JR]
Length = 257
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++I+G+ +L ++GGF A G+ L+ +IV G +G V + ++ IK
Sbjct: 3 LTSILGIIFGLLSLVGGFVAEKGHVSSLLAGSAALIVFGGTIGATVASFKMEDIKSIPAL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSR-------NETENHIDDPYNSTIFTSI 113
L +F ++ +V +L+ L+ +K R ET N DD
Sbjct: 63 LRIVF------KEHKYEVNELIVTLVGFAEKARREGLLSLERETANIEDD---------- 106
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
F+ +++++ G + + ++++ +I+ + G P
Sbjct: 107 -----------FLRQGIQLVVDGTDPAL-VRDILETQIEFMDQRHKIGADIFESAGGYAP 154
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+GI+G ++G++ +GNLS P+ LG AI + TL G+ + L P+ ++K +
Sbjct: 155 TMGIIGTVMGLVHVLGNLSD-PESLGPAIASAFIATLYGVSSANILWLPMGHKLKLKSKQ 213
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + + + +++ G P + E R L R +
Sbjct: 214 ERFIKEVALEGILSIQAGDNPSIVGEKLRAFLSAKVRKETQ 254
>gi|146282903|ref|YP_001173056.1| flagellar motor protein MotA [Pseudomonas stutzeri A1501]
gi|145571108|gb|ABP80214.1| flagellar motor protein MotA [Pseudomonas stutzeri A1501]
Length = 208
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 150 EIDIILYE--KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLT 207
E+D+ E L+ MG P IGI+GA++G+I MGNL+ P LG+ I V+
Sbjct: 91 EVDLYTQEGRDLRAAKVYESMGGYSPTIGIIGAVMGLIHVMGNLA-DPSQLGSGIAVAFV 149
Query: 208 GTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
T+ G+ + L P+ +++KS +Q ++ + +++ G P+
Sbjct: 150 ATIYGVAFANLLVLPVGNKLKSIVQRQTAYREMLLEGVLSIAEGENPR 197
>gi|153830565|ref|ZP_01983232.1| chemotaxis protein PomA [Vibrio cholerae 623-39]
gi|254225117|ref|ZP_04918731.1| chemotaxis protein PomA [Vibrio cholerae V51]
gi|125622504|gb|EAZ50824.1| chemotaxis protein PomA [Vibrio cholerae V51]
gi|148873963|gb|EDL72098.1| chemotaxis protein PomA [Vibrio cholerae 623-39]
Length = 254
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 152 DIILYEKL--KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
DI+L ++ K G+ PA+G++G ++G++ + N+ PK +G A+ V+L T
Sbjct: 128 DIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMD-DPKSIGPAMAVALLTT 186
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
L G +LS + P+ ++ R ++ ++ ++A +G P+V Y + L S+
Sbjct: 187 LYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNASK 246
Query: 270 R 270
R
Sbjct: 247 R 247
>gi|15640908|ref|NP_230539.1| flagellar motor protein PomA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121588121|ref|ZP_01677868.1| chemotaxis protein PomA [Vibrio cholerae 2740-80]
gi|121728327|ref|ZP_01681357.1| chemotaxis protein PomA [Vibrio cholerae V52]
gi|147674601|ref|YP_001216370.1| flagellar motor protein PomA [Vibrio cholerae O395]
gi|153215992|ref|ZP_01950214.1| chemotaxis protein PomA [Vibrio cholerae 1587]
gi|153802296|ref|ZP_01956882.1| chemotaxis protein PomA [Vibrio cholerae MZO-3]
gi|153817210|ref|ZP_01969877.1| chemotaxis protein PomA [Vibrio cholerae NCTC 8457]
gi|153823685|ref|ZP_01976352.1| chemotaxis protein PomA [Vibrio cholerae B33]
gi|153827038|ref|ZP_01979705.1| chemotaxis protein PomA [Vibrio cholerae MZO-2]
gi|227081068|ref|YP_002809619.1| chemotaxis protein PomA [Vibrio cholerae M66-2]
gi|229505503|ref|ZP_04395013.1| Flagellar motor rotation protein MotA [Vibrio cholerae BX 330286]
gi|229510827|ref|ZP_04400306.1| Flagellar motor rotation protein MotA [Vibrio cholerae B33]
gi|229513009|ref|ZP_04402475.1| Flagellar motor rotation protein MotA [Vibrio cholerae TMA 21]
gi|229517948|ref|ZP_04407392.1| Flagellar motor rotation protein MotA [Vibrio cholerae RC9]
gi|229523311|ref|ZP_04412718.1| Flagellar motor rotation protein MotA [Vibrio cholerae TM 11079-80]
gi|229608522|ref|YP_002879170.1| flagellar motor protein PomA [Vibrio cholerae MJ-1236]
gi|254285565|ref|ZP_04960529.1| chemotaxis protein PomA [Vibrio cholerae AM-19226]
gi|254848027|ref|ZP_05237377.1| flagellar motor protein PomA [Vibrio cholerae MO10]
gi|255744683|ref|ZP_05418634.1| Flagellar motor rotation protein MotA [Vibrio cholera CIRS 101]
gi|262161184|ref|ZP_06030295.1| Flagellar motor rotation protein MotA [Vibrio cholerae INDRE 91/1]
gi|262168687|ref|ZP_06036382.1| Flagellar motor rotation protein MotA [Vibrio cholerae RC27]
gi|297581276|ref|ZP_06943200.1| chemotaxis protein PomA [Vibrio cholerae RC385]
gi|298498986|ref|ZP_07008793.1| chemotaxis protein PomA [Vibrio cholerae MAK 757]
gi|9655347|gb|AAF94054.1| chemotaxis protein PomA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|51241595|emb|CAH17907.1| flagellar motor protein PomA [Vibrio cholerae]
gi|121547612|gb|EAX57711.1| chemotaxis protein PomA [Vibrio cholerae 2740-80]
gi|121629382|gb|EAX61812.1| chemotaxis protein PomA [Vibrio cholerae V52]
gi|124114505|gb|EAY33325.1| chemotaxis protein PomA [Vibrio cholerae 1587]
gi|124122178|gb|EAY40921.1| chemotaxis protein PomA [Vibrio cholerae MZO-3]
gi|126512244|gb|EAZ74838.1| chemotaxis protein PomA [Vibrio cholerae NCTC 8457]
gi|126518788|gb|EAZ76011.1| chemotaxis protein PomA [Vibrio cholerae B33]
gi|146316484|gb|ABQ21023.1| chemotaxis protein PomA [Vibrio cholerae O395]
gi|149739079|gb|EDM53375.1| chemotaxis protein PomA [Vibrio cholerae MZO-2]
gi|150424427|gb|EDN16364.1| chemotaxis protein PomA [Vibrio cholerae AM-19226]
gi|227008956|gb|ACP05168.1| chemotaxis protein PomA [Vibrio cholerae M66-2]
gi|227012712|gb|ACP08922.1| chemotaxis protein PomA [Vibrio cholerae O395]
gi|229339674|gb|EEO04689.1| Flagellar motor rotation protein MotA [Vibrio cholerae TM 11079-80]
gi|229344663|gb|EEO09637.1| Flagellar motor rotation protein MotA [Vibrio cholerae RC9]
gi|229349902|gb|EEO14856.1| Flagellar motor rotation protein MotA [Vibrio cholerae TMA 21]
gi|229350792|gb|EEO15733.1| Flagellar motor rotation protein MotA [Vibrio cholerae B33]
gi|229357726|gb|EEO22643.1| Flagellar motor rotation protein MotA [Vibrio cholerae BX 330286]
gi|229371177|gb|ACQ61600.1| Flagellar motor rotation protein MotA [Vibrio cholerae MJ-1236]
gi|254843732|gb|EET22146.1| flagellar motor protein PomA [Vibrio cholerae MO10]
gi|255737714|gb|EET93108.1| Flagellar motor rotation protein MotA [Vibrio cholera CIRS 101]
gi|262022805|gb|EEY41511.1| Flagellar motor rotation protein MotA [Vibrio cholerae RC27]
gi|262028934|gb|EEY47587.1| Flagellar motor rotation protein MotA [Vibrio cholerae INDRE 91/1]
gi|297534592|gb|EFH73429.1| chemotaxis protein PomA [Vibrio cholerae RC385]
gi|297543319|gb|EFH79369.1| chemotaxis protein PomA [Vibrio cholerae MAK 757]
gi|327483630|gb|AEA78037.1| Flagellar motor rotation protein MotA [Vibrio cholerae LMA3894-4]
Length = 254
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 152 DIILYEKL--KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
DI+L ++ K G+ PA+G++G ++G++ + N+ PK +G A+ V+L T
Sbjct: 128 DIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMD-DPKSIGPAMAVALLTT 186
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
L G +LS + P+ ++ R ++ ++ ++A +G P+V Y + L S+
Sbjct: 187 LYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNASK 246
Query: 270 R 270
R
Sbjct: 247 R 247
>gi|319790062|ref|YP_004151695.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
gi|317114564|gb|ADU97054.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
Length = 253
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 125 FICDYMRMIIVGNARSYEIENLMD--EEIDIILYEKLKPYHAI-SHMGESLPAIGIVGAI 181
F+ D MRM+I G EIE + E + +KL A+ +G+ PA G++G +
Sbjct: 108 FLGDIMRMLIDG----LEIEEIKSTAESAMAQIDQKLSTEVAVWESLGDLFPAFGMIGTL 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
+G+I+ + NLS P LG + V++ TL G IL+ +LC P++
Sbjct: 164 IGLIQMLQNLSD-PSALGPGMAVAMITTLYGAILANTLCIPVS 205
>gi|253575921|ref|ZP_04853255.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844715|gb|EES72729.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
Length = 278
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + + ++GGF GG L+Q +IV G +++ P+ ++ +
Sbjct: 3 IATLIGIIVGLAALVGGFTLEGGQLGGLLQVTAALIVFGGTFAAVLISFPVAKLRTVPKA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F K+ QD + + + SR E + E+
Sbjct: 63 LALAFMTKSPAQDGVIEDI-------VEMSSTSRREG-----------VLALEKKAAEHR 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIVG 179
+ F+ + +++++ G R+ + +M+ EID + +K Y I G P +GI+G
Sbjct: 105 D--PFLREGIQLVVDGTDRAM-VRQIMELEIDAV-SKKYDGYAKIFESAGGYAPTMGIIG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
++G+I +G+LS+ P LG +I ++ T TL G+ + + P+ S+IK+
Sbjct: 161 TVMGLIHVLGSLSE-PTALGPSIALAFTATLYGVASANLIFLPIASKIKA 209
>gi|158320523|ref|YP_001513030.1| MotA/TolQ/ExbB proton channel [Alkaliphilus oremlandii OhILAs]
gi|158140722|gb|ABW19034.1| MotA/TolQ/ExbB proton channel [Alkaliphilus oremlandii OhILAs]
Length = 261
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 39/278 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAG----AGLGGFVMANPLKVIKD 56
++TI+G+FI + +I G G+ + I I I G A L GF + N L K
Sbjct: 3 LATILGIFIGMFFVIQGI-TQEGSIWNFIDMSSIYITFGGMIAATLVGFPLQNVLAAFKI 61
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIP 114
G + F KA D + ++ + K+G + E ID+P+
Sbjct: 62 GGKA----FFNKA--DDPKAIIAQINTLANIARKEGLLALEEASGQIDEPF--------- 106
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLP 173
M+IV + NL++ E+ I E+ + AI +G + P
Sbjct: 107 ------------LKKGAMLIVDGTDPELVRNLLETELSFI-EERHRNGQAIFEALGANAP 153
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK-STRL 232
A G+VG ++G++ + L P +G ++ V+L T G + + + P+ +++K +R
Sbjct: 154 AFGMVGTLIGLVNMLKKLD-DPSAIGPSMAVALITTFYGSLFANLIFLPMATKLKLKSRE 212
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ R I+V + L++ G P++ E + LP ER
Sbjct: 213 EILRKEIMV-EGLLSIQAGENPRIIEEKLKAFLPPKER 249
>gi|238916757|ref|YP_002930274.1| chemotaxis protein MotA [Eubacterium eligens ATCC 27750]
gi|238872117|gb|ACR71827.1| chemotaxis protein MotA [Eubacterium eligens ATCC 27750]
Length = 267
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA G++G +LG++ + NLS S I G + V+L TL G +++ LC P+++++K
Sbjct: 160 PAWGMIGTLLGLVNMLKNLSDSASI-GPNMAVALLTTLYGSLIANWLCVPISNKLKLQNN 218
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+++L I+ + L++ G P+V E + L S R ++
Sbjct: 219 DEYQLREIIIEGLLSIQAGENPRVIEEKLKSFLSPSARTAL 259
>gi|90415362|ref|ZP_01223296.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
gi|90332685|gb|EAS47855.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
Length = 250
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
Query: 117 LENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ F+ + M++ G + I++ +D E+ + S GE PA+
Sbjct: 92 LEGQEIDNPFMSKAVSMLVDGTDPAI-IKSSLDRELISTKQRHARGAKIFSAWGEIAPAM 150
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ +GN+ PK +G A+ V+L T+ G IL+ +C P+ ++++ +
Sbjct: 151 GMIGTLIGLVQMLGNMGD-PKSIGPAMAVALLTTMYGAILANVICLPIAMKLENQADLEA 209
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ + ++ +G P+V ++ L ER
Sbjct: 210 ANNELIIEGILFIQDGGNPRVLSDFLGSFLGPKER 244
>gi|90408166|ref|ZP_01216334.1| flagellar motor protein [Psychromonas sp. CNPT3]
gi|90310696|gb|EAS38813.1| flagellar motor protein [Psychromonas sp. CNPT3]
Length = 257
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ 226
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +++ +C P++ +
Sbjct: 145 QFGDVAPAMGMIGTLIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAMVANMVCLPISDK 203
Query: 227 IKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+K ++ ++ A++ +G P+V R LP S+R
Sbjct: 204 LKLRAAEEKLNKSLILDAVLGIQDGQNPRVIEGLLRNYLPESKR 247
>gi|222100884|ref|YP_002535452.1| Motility protein A [Thermotoga neapolitana DSM 4359]
gi|221573274|gb|ACM24086.1| Motility protein A [Thermotoga neapolitana DSM 4359]
Length = 256
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G PA G++G ++G+I+ + +L+ +P+ LG ++ V+L TL G IL+ + P+ +IK
Sbjct: 144 GAYAPAFGMIGTLIGLIQMLKSLN-NPETLGPSMAVALITTLYGAILANGVFLPMAEKIK 202
Query: 229 STR---LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
R + + R+ + +A+++ G P++ E + LP E+ + E +QE
Sbjct: 203 KRRDILVMEKRMIL---EAVLSIQAGENPRILEEKLKSFLPEKEKRAYEAASQEA 254
>gi|220924427|ref|YP_002499729.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
gi|219949034|gb|ACL59426.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
Length = 292
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEID---IILYEKLKPYHAISHMG 169
P LEN E++ F+ +R I G R + I + M+ + D + L E K Y A G
Sbjct: 129 PMALENLEVSDPFLAQGVRYIADGYDREF-IRDTMERDRDNFLMHLEEGSKVYRAF---G 184
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+ PA G++G ILG++ N+S P LG A+ +L TL G +++ + P+ ++
Sbjct: 185 DCAPAWGMIGTILGMVTMFANMSD-PSKLGPAMATALLATLYGALIANMIALPIADKL 241
>gi|254492042|ref|ZP_05105219.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224462739|gb|EEF79011.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 254
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+G++ PA+G++G ++G+++ + N+S PK +G A+ V+L TL G +L+ P+ ++
Sbjct: 146 IGDAAPAMGMIGTLVGLVQMLTNMSD-PKSIGPAMAVALLTTLYGAMLANMFALPIADKL 204
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ I+ ++++ G P+V E R LP S+R + E
Sbjct: 205 SLRSSEELMNKTIIIESVLGIQEGQNPKVLGEILRNFLPASKRENEE 251
>gi|225871804|ref|YP_002753258.1| chemotaxis MotA protein [Acidobacterium capsulatum ATCC 51196]
gi|225793187|gb|ACO33277.1| chemotaxis MotA protein [Acidobacterium capsulatum ATCC 51196]
Length = 269
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 115/270 (42%), Gaps = 37/270 (13%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGY-KALGQDTYCDVLK 80
GG ++QP +IV G LG ++ PL + + L ++F K+ GQ T LK
Sbjct: 24 GGRIDQIMQPTAAMIVFGGTLGAVMLQYPLATVLAALRRLAQVFFQGKSAGQAT----LK 79
Query: 81 LLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
L ++ S ++ I +P+ + SI M+ V
Sbjct: 80 QLVEFANKARRHGIVSLDQDLAKIKEPF---LKQSI------------------MLAVDG 118
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
E+ +M+ ++D + + K G P IGI+GA+LG+I+ M +L ++
Sbjct: 119 TEPAELRKIMELQLDNLTEREEKIPAVFESAGGFSPTIGIIGAVLGLIQVMQHLDHIDQV 178
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP--- 254
G I V+ T+ G+ + P+ +++ ++HR+ +V + +I+ + G P
Sbjct: 179 -GRGIAVAFVATIYGVAAANLAFLPIAGKLRHRIREEHRVKEMVIEGVISILEGMNPRMI 237
Query: 255 QVAIE----YGRKVLPLSERPSIEIVAQEV 280
+V +E G K + S E +EV
Sbjct: 238 EVKLESFLGAGSKAKGRKAKESAEAATEEV 267
>gi|307824497|ref|ZP_07654722.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307734481|gb|EFO05333.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 251
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 120/255 (47%), Gaps = 26/255 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I G+F+ + I+ G GG+ + L+ ++IV G G ++ P V V +
Sbjct: 5 SIAGIFVGVGAILLGIMLDGGDIHSLVNVPALIIVFGGTFGATLLQYPPAVF----VRSM 60
Query: 63 EIFGYKALGQDTYC--DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++F + + ++ + K++Y + +R E ++D ++P
Sbjct: 61 KMFSWVLISKEMNLSEQIDKVIYWSLL-----ARKEGLLGLED--------ALP-----K 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E FI +++++ GN I ++++ ++D L+ MG P IGI+GA
Sbjct: 103 EEDPFIKKGLQLLVDGNDPD-AIRDILEMDMDAKESMGLQAAGVYEAMGGYAPTIGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M NL+ +P++LG I + T+ G+ + + P+ +++K+ L + +
Sbjct: 162 VMGLIHVMQNLT-NPELLGQGIATAFVATIYGVGSANLVFLPVANKLKAHVLALTQAREM 220
Query: 241 VKKALIAYMNGAIPQ 255
+ + +I+ G P+
Sbjct: 221 LAEGIISIAEGQNPR 235
>gi|229158120|ref|ZP_04286189.1| hypothetical protein bcere0010_42980 [Bacillus cereus ATCC 4342]
gi|228625349|gb|EEK82107.1| hypothetical protein bcere0010_42980 [Bacillus cereus ATCC 4342]
Length = 266
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + +++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAEIEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|149201620|ref|ZP_01878594.1| Flagellar motor protein MotA [Roseovarius sp. TM1035]
gi|149144668|gb|EDM32697.1| Flagellar motor protein MotA [Roseovarius sp. TM1035]
Length = 253
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LEN E+ F ++M++ G S ++ L DE I + + + A+ + PA+
Sbjct: 95 LENQEVPDKFFSKGLQMLVDGADESKLVKQLSDE-IKAMKVRHGEVHEALRGWIDIAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G++G ++G+++ +GN++ PK +G A+ V+L TL G ++ + P+ S+++
Sbjct: 154 GMIGTLIGLVQMLGNMAD-PKAIGPAMAVALLTTLYGAFIANVMVGPVLSKLE 205
>gi|320354326|ref|YP_004195665.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
gi|320122828|gb|ADW18374.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
Length = 254
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ ++M + G E++ ++ EID I + MG PA+G+VG ++G+
Sbjct: 106 FMVKALQMAVDGQ-EPAELKAMLLNEIDNIAARHSNGAQILDTMGAIAPAMGMVGTLIGL 164
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY-IIVKK 243
++ + N+S P +G A+ V+L T G +L+ L P+ ++K TR K L ++ +
Sbjct: 165 VQMLQNMS-DPAAIGPAMAVALLTTFYGAVLANVLFIPMAGKLK-TRSKTEVLQKTMITE 222
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ + ++G P+V + L +R S+
Sbjct: 223 GMESILSGENPRVMEQRLHTYLAPKKRESV 252
>gi|58582453|ref|YP_201469.1| flagellar motor protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84624344|ref|YP_451716.1| flagellar motor protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427047|gb|AAW76084.1| MotA protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368284|dbj|BAE69442.1| MotA protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 246
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + N+++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ M NL+ P +LG I + T T+ GI + L P+ +++KS +V +
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMVIE 223
Query: 244 ALIAYMNGAIPQ 255
LIA G P+
Sbjct: 224 GLIAIAQGENPR 235
>gi|188576037|ref|YP_001912966.1| flagellar motor protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520489|gb|ACD58434.1| MotA protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 237
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + N+++ E+D + L MG P +GI+GA+LG
Sbjct: 97 AFLRKGLQMLVDG-VEPESMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 155
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ M NL+ P +LG I + T T+ GI + L P+ +++KS +V +
Sbjct: 156 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMVIE 214
Query: 244 ALIAYMNGAIPQ 255
LIA G P+
Sbjct: 215 GLIAIAQGENPR 226
>gi|119470008|ref|ZP_01612813.1| putative Chemotaxis motA protein [Alteromonadales bacterium TW-7]
gi|119446718|gb|EAW27991.1| putative Chemotaxis motA protein [Alteromonadales bacterium TW-7]
Length = 254
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 13/130 (10%)
Query: 150 EIDIILYEK--LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLT 207
EID++L + L+ MG P IGI+GA+LG+I+AM ++ P++LG + +
Sbjct: 129 EIDLMLERERLLEAARVYEAMGGYSPTIGILGAVLGLIQAMSFIT-DPQLLGAGVATAFI 187
Query: 208 GTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI-IVKKALIAYMNGAIP---QVAIEYGRK 263
T+ G+ L+ L P+ ++K R+++ LY ++ + +IA +G P ++ +E R
Sbjct: 188 ATIYGVGLANLLFLPMAHKLKQ-RVEEKMLYHEMLAEGIIAISDGQSPMNIELKLEAYR- 245
Query: 264 VLPLSERPSI 273
ERPS+
Sbjct: 246 ----VERPSL 251
>gi|328542462|ref|YP_004302571.1| MotA/TolQ/ExbB proton channel [polymorphum gilvum SL003B-26A1]
gi|326412209|gb|ADZ69272.1| MotA/TolQ/ExbB proton channel [Polymorphum gilvum SL003B-26A1]
Length = 246
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
Query: 138 ARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
A YEI+ + M+ E D+ L + +G+S PA G++G ++G+++ + N+
Sbjct: 105 ADGYEIDFIRESMERERDLTLTRLSEGKRVFKALGDSAPAFGMIGTLVGLVQMLANM-DD 163
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST----------------RLKQHRLY 238
P +G ++ V+L TL G ++S +C P+ ++ + ++++ +
Sbjct: 164 PSAIGPSMAVALLTTLYGALISNVVCLPIVDKLDAKFDVEELNQTLIIDGILQIRESKSP 223
Query: 239 IIVKKALIAYM 249
++++ LIAY+
Sbjct: 224 ALIREMLIAYL 234
>gi|166711988|ref|ZP_02243195.1| flagellar motor protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 246
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + N+++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ M NL+ P +LG I + T T+ GI + L P+ +++KS +V +
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMVIE 223
Query: 244 ALIAYMNGAIPQ 255
LIA G P+
Sbjct: 224 GLIAIAQGENPR 235
>gi|301056022|ref|YP_003794233.1| flagellar motor protein [Bacillus anthracis CI]
gi|300378191|gb|ADK07095.1| flagellar motor protein [Bacillus cereus biovar anthracis str. CI]
Length = 264
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 148 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 206
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + +++ RL I L+ G P + L +ER +E A++
Sbjct: 207 NKLKQKSAAEIEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|302037672|ref|YP_003797994.1| flagellar motor protein MotA [Candidatus Nitrospira defluvii]
gi|300605736|emb|CBK42069.1| Flagellar motor protein MotA [Candidatus Nitrospira defluvii]
Length = 256
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ I I I+GG GG+ ++Q +IV G +G + NPL V+ S +S
Sbjct: 3 IATILGVVIAIGSILGGQALEGGHVGSVLQLTAFIIVMGGTIGACCVQNPLSVVLKS-IS 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ + D + ++L + + K+G E I D ++ I +++
Sbjct: 62 MVSL-ALTNPPHDVKGTITQILDLANVSRKQGLL-ALEGKIKDLHDPFFKKGIQLIVDGT 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ EI + E + K + A G P +GI+GA
Sbjct: 120 DPKLL---------------QEILEIEVEHHEEEGVHAAKVWEA---AGGYAPTVGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NL+ P LG I V+ T+ G+ + P+ +++K ++ L +
Sbjct: 162 VLGLIHVMENLA-DPSKLGGGIAVAFVATVYGVGAANLFFLPIGNKMKFKLKEEAGLRTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V L+ G P++ E LP ER
Sbjct: 221 VIMGLVGLAQGENPRLLQEKLESFLPPHER 250
>gi|239906260|ref|YP_002953000.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239796125|dbj|BAH75114.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 267
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 125/275 (45%), Gaps = 23/275 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + + Y + + + + IV G L + PLK + +
Sbjct: 3 IATVIGIVFGVAILGFATYLSTDSAGVFVNFPGLAIVLGGTLASTFICFPLKEVMRVSST 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + L D Y + + ++ + + + + H++ ++P + N
Sbjct: 63 FLTALKREELPTDHYIEAI-------VSIAREASSRGKIHLEQ--------ALPGI--EN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + ++M++ G +R EI+ ++D I+ ++L M + PA GI+G
Sbjct: 106 E---FLQNAVQMLVDGYSRE-EIKEILDTRIEQTYQQELSSAGIYRTMAKLAPAYGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M ++S LG + V+LT TL GI+LS + P+ +++ R+++ + +
Sbjct: 162 LIGLIGMMQSMSVGLGNLGAHMAVALTTTLYGILLSNLIFLPIAIKVEK-RIEERVILMC 220
Query: 241 VKKALIAYMNGAIP-QVAIEYGRKVLPLSERPSIE 274
V + ++ P + ++ + LP SI+
Sbjct: 221 VIRDGTLFIKDKTPAAIVLDKLKAYLPPRRWASID 255
>gi|153840269|ref|ZP_01992936.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ3810]
gi|149746071|gb|EDM57201.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ3810]
Length = 187
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +LS L P+ ++
Sbjct: 81 GDVAPAMGMIGTLVGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAVLSNMLFFPIADKLS 139
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEY-------GRKVLPLSE 269
R ++ ++ ++A +G P+V Y G++ L + E
Sbjct: 140 LRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEGKRALEIDE 187
>gi|242277508|ref|YP_002989637.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242120402|gb|ACS78098.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 258
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 40/267 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLK-VIKDSGV 59
++TIIG+F I ++ Y + + I I IV G + + PL+ V++ GV
Sbjct: 3 IATIIGIFCGIAILMVATYTSTDSVGVFINIPGIAIVGGGTIASTFICYPLREVMRVLGV 62
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
++ + G L + Y +V+ L K ++ E H++ + +EN
Sbjct: 63 FMMAM-GADELPLENYINVI-------VGLSKDVSSKGEEHLEGSLKN---------IEN 105
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH--------MGES 171
+ F+ + ++M++ G ++ EEI IL +++ YH + M
Sbjct: 106 D----FLREGLQMLVDGYSK---------EEIKEILDNRIQQYHEQEYSAAGIYRTMSTL 152
Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
PA GI+G ++G+I M + +G A+ +LT TL G + + L P+ +++ R
Sbjct: 153 SPAFGIIGTLIGLIAMMQGMGSDIAAIGPAMATALTTTLYGALFANMLFMPIAIKVEK-R 211
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAI 258
+ + L + V + I ++ P +
Sbjct: 212 IDEITLLMRVIRDGILFIKDKTPSAIV 238
>gi|86750475|ref|YP_486971.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86573503|gb|ABD08060.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 257
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 28/272 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL I ++ MGGN + ++++ G ++ PL + G+
Sbjct: 3 IATLIGL-IAGAVVVSSLILMGGNFGMFYDIHAVIVIFGGSFAATLIRFPLSAML-HGLP 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + V +L I K G + DDP
Sbjct: 61 LGAKFAFTMSNLSARDLVDELARIAEIARKSGPVGLEKVEADDP---------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGESLPAIGIV 178
F+ +R + G + +NL + + +L+ E K Y AI G+ PA G++
Sbjct: 105 ----FLAKGIRYVADGYDLEFIRDNLERDRDNFLLHLNEGSKIYRAI---GDCAPAFGMI 157
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G +LG+++ N+ Q P LG + V+L TL G +++ +C P+ ++ + +
Sbjct: 158 GTLLGMVQMFSNM-QDPSKLGPFMAVALLATLYGAVVANLVCLPIADKLHGKLVDEETNR 216
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 217 TLIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|218778867|ref|YP_002430185.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218760251|gb|ACL02717.1| Chemotaxis protein MotA [Desulfatibacillum alkenivorans AK-01]
Length = 253
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 122/267 (45%), Gaps = 29/267 (10%)
Query: 10 TILCIIGGF----YAMGGNPY-ILIQPFEIVIVAGAGLGGFVMANPLK-VIKDSGVSLLE 63
TIL ++G F A+G + I ++IV G +G ++ PLK ++ GV++
Sbjct: 5 TILGVVGSFVLVVLAIGPSGLGAFINVPSLIIVVGGTMGATMINYPLKEILGIVGVAMKT 64
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F +A +DT + + + +R E ++ LE+
Sbjct: 65 VFAKEASAKDTIAKFM--------DFAQKARREGILSLEGDIKE---------LEDE--- 104
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ +++ I G I +M+ EI+ + + +G PA+G+VG ++G
Sbjct: 105 -FMKKGIQLAIDG-LEPNAIREIMETEINYTMNRHKLGADLFTTIGTFAPALGMVGTLIG 162
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+++ + ++ + P +G A+ V+L T G IL+ +C P+ ++K ++ + +V +
Sbjct: 163 LVQMLQSM-EDPSSIGPAMAVALLTTFYGAILANIICMPVAGKLKMRSSQEMEVRELVVE 221
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSER 270
+++ +G P++ + LP +R
Sbjct: 222 GVLSLSSGENPRIVEQKLACFLPPKQR 248
>gi|24375769|ref|NP_719812.1| chemotaxis motA protein [Shewanella oneidensis MR-1]
gi|24350714|gb|AAN57256.1|AE015861_8 chemotaxis motA protein [Shewanella oneidensis MR-1]
Length = 244
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 36/234 (15%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+ IG+ + ++ I+ G GG+P L+ +IV G +G V P VI ++ +
Sbjct: 2 SFIGVIVALVFILVGNLIEGGHPSALLDLPAFMIVIGGTIGATVAQFPFSVI----IASM 57
Query: 63 EIFGYKALGQDTYC-DVLKLLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTVLE 118
+ F + T + + L + +++KG S + + IDDP
Sbjct: 58 KRFKWLIFPLRTDLNERAEFLIEIAGDVRKGGLLSIEDKIDQIDDP-------------- 103
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY---EKLKPYHAISHMGESLPAI 175
F+ + +++ G + +E ++++EI+ + + +K Y A MG P +
Sbjct: 104 ------FLHKGLELLVDGYEKDNIVE-ILEKEIEFEQHGIEQTVKVYEA---MGGYCPTM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
GIVGA+ G+I AMG L +P LG AI V+ T+ G+ + + P ++ K+
Sbjct: 154 GIVGAVFGLIHAMG-LLDAPDKLGGAIAVAFIATIYGVAAANIIFLPFGNRYKA 206
>gi|325997690|gb|ADZ49898.1| Flagellar motor rotation protein [Helicobacter pylori 2017]
Length = 247
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 116 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 174
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ SY++ P ++K+ + ++ + ++ NG P+
Sbjct: 175 AFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 225
>gi|307637505|gb|ADN79955.1| Flagellar motor rotation protein [Helicobacter pylori 908]
gi|325996094|gb|ADZ51499.1| Flagellar motor rotation protein [Helicobacter pylori 2018]
Length = 247
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 116 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 174
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ SY++ P ++K+ + ++ + ++ NG P+
Sbjct: 175 AFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 225
>gi|161521535|ref|YP_001584962.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189352296|ref|YP_001947923.1| chemotaxis MotA protein [Burkholderia multivorans ATCC 17616]
gi|160345585|gb|ABX18670.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189336318|dbj|BAG45387.1| chemotaxis MotA protein [Burkholderia multivorans ATCC 17616]
Length = 254
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 102/241 (42%), Gaps = 27/241 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GG+ L Q VIV G LG ++ N D+ V L
Sbjct: 5 TLAGVLLGGAAIVFGFTLEGGHLATLFQLEAFVIVLGGTLGAVMIQNTWARFVDA-VKQL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENNE 121
+ A + T D L +L + G R + E + + S T I P E
Sbjct: 64 RL----AFVRATAADRKHLSDLLEW----GDRAKLEGLL--AFESMDVTGIHPFARRGLE 113
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L + + M + IE+ + E+D L G P GI+G++
Sbjct: 114 L---LANGMSTAV--------IEDALQRELDAYERSHLAAARVWQQAGGYAPTFGILGSV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRLY 238
LG+++ G++ + P LG I V+ TL G+ + + PL ++++ + L+ +LY
Sbjct: 163 LGLVQVTGHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAHVDSELRFRKLY 221
Query: 239 I 239
+
Sbjct: 222 L 222
>gi|315586520|gb|ADU40901.1| flagellar motor protein MotA [Helicobacter pylori 35A]
Length = 247
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 116 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 174
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ SY++ P ++K+ + ++ + ++ NG P+
Sbjct: 175 AFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 225
>gi|221210918|ref|ZP_03583898.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans CGD1]
gi|221169874|gb|EEE02341.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans CGD1]
Length = 254
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 102/241 (42%), Gaps = 27/241 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GG+ L Q VIV G LG ++ N D+ V L
Sbjct: 5 TLAGVLLGGAAIVFGFTLEGGHLATLFQLEAFVIVLGGTLGAVMIQNTWARFVDA-VKQL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENNE 121
+ A + T D L +L + G R + E + + S T I P E
Sbjct: 64 RL----AFVRATAADRKHLSDLLEW----GDRAKLEGLL--AFESMDVTGIHPFARRGLE 113
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L + + M + IE+ + E+D L G P GI+G++
Sbjct: 114 L---LANGMSTAV--------IEDALQRELDAYERSHLAAARVWQQAGGYAPTFGILGSV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRLY 238
LG+++ G++ + P LG I V+ TL G+ + + PL ++++ + L+ +LY
Sbjct: 163 LGLVQVTGHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAHVDSELRFRKLY 221
Query: 239 I 239
+
Sbjct: 222 L 222
>gi|330953775|gb|EGH54035.1| flagellar motor protein [Pseudomonas syringae Cit 7]
Length = 93
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P +GI+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+
Sbjct: 1 PTVGIIGAVMGLIHVMGNLA-DPSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAIAH 59
Query: 233 KQHRLYIIVKKALIAYMNGAIPQ 255
+Q R ++ + L++ G P+
Sbjct: 60 RQARYREMLLEGLLSIAEGENPR 82
>gi|329904711|ref|ZP_08273912.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
gi|327547855|gb|EGF32613.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
Length = 246
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 22/228 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++ GL + +L I+ G GG L+QP VIV G ++ + +K GV +
Sbjct: 5 SVAGLVLALLGILVGQLLEGGRLGSLVQPTAFVIVMVGTFGAVLLQSGWPTVK-RGVRM- 62
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
A D+ +L + + +R E S+ ++N++
Sbjct: 63 -----AAAAFRNQPDLHRLHAADVAMWSQTARREG------------LLSLERFMDNSD- 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
FI +R++ G Y++ ++ EI + K G P IGI+GA+L
Sbjct: 105 DPFITKGLRLLTDG-IDPYKLREILGIEISSYETRERKAARIWDAAGGYAPTIGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
G+I M NLS P LG I V+ T+ G+ L+ + P+ ++K+
Sbjct: 164 GLIHVMENLSD-PSRLGAGIAVAFVATIYGVGLANLVFLPIGGKLKTA 210
>gi|118475363|ref|YP_891434.1| flagellar motor protein MotA [Campylobacter fetus subsp. fetus
82-40]
gi|118414589|gb|ABK83009.1| flagellar motor protein [Campylobacter fetus subsp. fetus 82-40]
Length = 256
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 34/261 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI G+ + I I G GGNP ++ ++IV + V A K +K +
Sbjct: 3 LSTIFGMVLAITSISVGDILEGGNPLHVLHISSVLIVIPTAMFSAVTATNKKYVK-AAFK 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
L++ +K G D + +++ K G S + + IDD
Sbjct: 62 ELKV-AFKGSGVDMSKRIAEMVEYSTLARKNGILSLEQKASSIDDE-------------- 106
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM----GESLPA 174
F+ + M++ G ENL E+ I E+ YH +H GES P
Sbjct: 107 ------FLKTGLSMLVDGQPIDEVKENL---ELAIETTEEY--YHECAHFWIKTGESCPT 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G+VGA++G++ A+ L P + I + T T+ GI+ +Y+ P +I
Sbjct: 156 FGLVGAVMGLMLAL-QLLDDPAAMAAGIAGAFTATVTGIMGAYAFFGPWGQKILGNAKDI 214
Query: 235 HRLYIIVKKALIAYMNGAIPQ 255
+ ++ +AL+ GA P+
Sbjct: 215 IKEKTMIIEALVGIAEGANPR 235
>gi|87120690|ref|ZP_01076583.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86163918|gb|EAQ65190.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 251
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ ++M++ G+ S +++ M++++ + +G++ PA+G++G ++G+
Sbjct: 104 FMSKGIQMLVDGHDGSV-VKSQMNKDMKMAFERHDAGAKVFKALGDTGPAMGMIGTLIGL 162
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++ + N+ PK +G A+ V+L TL G +L+ + P+ +++++ ++ + ++ A
Sbjct: 163 VQMLANMD-DPKSIGPAMAVALLTTLYGAMLANMVAIPIQAKLENRANEELKAQQLIIDA 221
Query: 245 LIAYMNGAIPQV 256
L+A G P+V
Sbjct: 222 LLAIQAGQNPRV 233
>gi|218533171|ref|YP_002423987.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240141686|ref|YP_002966166.1| putative chemotaxis protein (flagellar motor component)
[Methylobacterium extorquens AM1]
gi|254564194|ref|YP_003071289.1| chemotaxis protein [Methylobacterium extorquens DM4]
gi|218525474|gb|ACK86059.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240011663|gb|ACS42889.1| putative chemotaxis protein (flagellar motor component)
[Methylobacterium extorquens AM1]
gi|254271472|emb|CAX27487.1| putative chemotaxis protein (flagellar motor component)
[Methylobacterium extorquens DM4]
Length = 257
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILY---EKLKPYHAISHMG 169
P LEN E++ F+ R I G R + I + M+ + D L E K Y A G
Sbjct: 94 PIALENMEISDPFLAQGARYIADGYDRDF-IRDTMERDRDNFLMHLDEGSKIYRAF---G 149
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+ PA G++G ILG++ N+S P LG A+ +L TL G +++ + P+ ++
Sbjct: 150 DCAPAWGMIGTILGMVTMFANMSD-PSKLGPAMATALLATLYGALIANMITLPIADKL 206
>gi|229163500|ref|ZP_04291451.1| hypothetical protein bcere0009_42660 [Bacillus cereus R309803]
gi|228620069|gb|EEK76944.1| hypothetical protein bcere0009_42660 [Bacillus cereus R309803]
Length = 264
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 148 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYILWHPFA 206
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + +++ RL I L+ G P + L +ER +E A++
Sbjct: 207 NKLKQKSAAEIEKKRLII---DCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|126665355|ref|ZP_01736337.1| flagellar motor protein PomA [Marinobacter sp. ELB17]
gi|126629983|gb|EBA00599.1| flagellar motor protein PomA [Marinobacter sp. ELB17]
Length = 261
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 117 LENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+++ F+ + ++M++ G I+ L+ +E + L + + PA+
Sbjct: 95 LEGREVSSPFLGNGIQMLVDGQ-DGATIKQLLSKEQLMTLEHNRSGAKVFTAFADVGPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ + N+ + PK +G A+ V+L TL G +++ + +P+ ++ ++
Sbjct: 154 GMIGTLIGLVQMLANM-EDPKSIGPAMAVALLTTLYGAMMATMIASPIADKLSLRMTQEA 212
Query: 236 RLYIIVKKALIAYMNGAIPQV 256
R+ + AL A G P++
Sbjct: 213 RMQSLYIDALGAIQEGVNPRI 233
>gi|317177354|dbj|BAJ55143.1| flagellar motor protein MotA [Helicobacter pylori F16]
gi|317182127|dbj|BAJ59911.1| flagellar motor protein MotA [Helicobacter pylori F57]
Length = 257
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 126 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 184
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ SY++ P ++K+ + ++ + ++ NG P+
Sbjct: 185 AFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 235
>gi|304317568|ref|YP_003852713.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779070|gb|ADL69629.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 270
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 36/265 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGG----FVMANPLKVIKD 56
ST++G+ + +I F GG+ LI +IV G +G F M + LK+ K
Sbjct: 3 FSTLLGIIVGFGSLIFAFVLEGGSVSSLIGLSAAIIVLGGTIGATMTSFSMKDILKLPKL 62
Query: 57 SGVSLLEIFGYKALGQDTYCDVLK-LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT 115
G + +K G + Y D++K +Y L + +R+E S+
Sbjct: 63 IGKA------FKEEG-NKYLDIIKYFVY-----LSQKARSEG------------LLSLEQ 98
Query: 116 VLENNELTTF---ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
L+++E+ + + D + ++I G A I+ M+ I I K G
Sbjct: 99 ELQSDEIKNYDPILKDCIELVIDG-ADIELIKTTMENRIYIEDKALKKEASMFEAAGGYS 157
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS-TR 231
P +GI+G ++G++ +GNLSQ P LG +I V+ TL G+ ++ + P+ ++K+ +
Sbjct: 158 PTMGIIGTVMGLVHVLGNLSQ-PDKLGPSIAVAFIATLYGVSMANLVWLPIGEKLKNKAQ 216
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQV 256
+K+ II++ +L + G P++
Sbjct: 217 IKKTEKEIILEGSL-SLQAGENPKI 240
>gi|251772420|gb|EES52987.1| putative flagellar motor component (MotA) [Leptospirillum
ferrodiazotrophum]
Length = 264
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 27/258 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL I I I+ G G ++QP +IV G G ++ PL I ++
Sbjct: 3 ITTILGLVIGIGAILLGATLEGLPLTTILQPTAAMIVFGGTFGATLLQFPLNFIINALKM 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTV 116
+ + K++ ++ +L K SR E E H++DP
Sbjct: 63 IPRVLISKSVDPGPIIQKIQ-------DLSKTSRKEGLLKLEAHLEDP------------ 103
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ + +RM++ G + ++ ++ E I E+ Y MG P IG
Sbjct: 104 --EIKADPYFARGVRMVMDGTEIT-KVREALEVEAHYIEEEEGVVYKVFESMGGYAPTIG 160
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+GA+LG+I M N+ P L I + T+ G+ + + P+ ++K + +
Sbjct: 161 ILGAVLGLIHVMSNMG-DPGKLAEGIATAFVATVYGVGSANLVYLPIGGKLKLKGRGEAK 219
Query: 237 LYIIVKKALIAYMNGAIP 254
L I+ L+ G P
Sbjct: 220 LREIIVDGLVGIGQGENP 237
>gi|109947290|ref|YP_664518.1| flagellar motor protein MotA [Helicobacter acinonychis str. Sheeba]
gi|109714511|emb|CAJ99519.1| flagellar motor rotation protein MotA [Helicobacter acinonychis
str. Sheeba]
Length = 257
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 126 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 184
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ SY++ P ++K+ + ++ + ++ NG P+
Sbjct: 185 AFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 235
>gi|15611818|ref|NP_223469.1| flagellar motor protein MotA [Helicobacter pylori J99]
gi|15645434|ref|NP_207608.1| flagellar motor protein MotA [Helicobacter pylori 26695]
gi|108563225|ref|YP_627541.1| flagellar motor protein MotA [Helicobacter pylori HPAG1]
gi|188527340|ref|YP_001910027.1| flagellar motor protein MotA [Helicobacter pylori Shi470]
gi|208434726|ref|YP_002266392.1| flagellar motor rotation protein [Helicobacter pylori G27]
gi|210135014|ref|YP_002301453.1| flagellar motor protein MotA [Helicobacter pylori P12]
gi|217032505|ref|ZP_03437996.1| hypothetical protein HPB128_180g4 [Helicobacter pylori B128]
gi|217034138|ref|ZP_03439558.1| hypothetical protein HP9810_868g31 [Helicobacter pylori 98-10]
gi|298736518|ref|YP_003729044.1| chemotaxis protein MotA [Helicobacter pylori B8]
gi|308182971|ref|YP_003927098.1| flagellar motor protein MotA [Helicobacter pylori PeCan4]
gi|54037819|sp|P65411|MOTA_HELPJ RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|54041481|sp|P65410|MOTA_HELPY RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|2313947|gb|AAD07864.1| flagellar motor rotation protein (motA) [Helicobacter pylori 26695]
gi|4155315|gb|AAD06330.1| putative CHEMOTAXIS PROTEIN (MOTILITY PROTEIN A) [Helicobacter
pylori J99]
gi|107836998|gb|ABF84867.1| flagellar motor rotation protein [Helicobacter pylori HPAG1]
gi|188143580|gb|ACD47997.1| flagellar motor protein MotA [Helicobacter pylori Shi470]
gi|208432655|gb|ACI27526.1| flagellar motor rotation protein [Helicobacter pylori G27]
gi|210132982|gb|ACJ07973.1| flagellar motor rotation protein MotA [Helicobacter pylori P12]
gi|216943422|gb|EEC22878.1| hypothetical protein HP9810_868g31 [Helicobacter pylori 98-10]
gi|216945783|gb|EEC24406.1| hypothetical protein HPB128_180g4 [Helicobacter pylori B128]
gi|261837955|gb|ACX97721.1| flagellar motor rotation protein [Helicobacter pylori 51]
gi|298355708|emb|CBI66580.1| chemotaxis protein MotA [Helicobacter pylori B8]
gi|308062135|gb|ADO04023.1| flagellar motor protein MotA [Helicobacter pylori Cuz20]
gi|308063397|gb|ADO05284.1| flagellar motor protein MotA [Helicobacter pylori Sat464]
gi|308065156|gb|ADO07048.1| flagellar motor protein MotA [Helicobacter pylori PeCan4]
gi|317009175|gb|ADU79755.1| flagellar motor protein MotA [Helicobacter pylori India7]
gi|317012626|gb|ADU83234.1| flagellar motor protein MotA [Helicobacter pylori Lithuania75]
gi|317014224|gb|ADU81660.1| flagellar motor protein MotA [Helicobacter pylori Gambia94/24]
gi|317180578|dbj|BAJ58364.1| flagellar motor protein MotA [Helicobacter pylori F32]
gi|332673380|gb|AEE70197.1| flagellar motor protein MotA [Helicobacter pylori 83]
Length = 257
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 126 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 184
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ SY++ P ++K+ + ++ + ++ NG P+
Sbjct: 185 AFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 235
>gi|317011032|gb|ADU84779.1| flagellar motor protein MotA [Helicobacter pylori SouthAfrica7]
Length = 257
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 126 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 184
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ +Y+L P ++K+ + ++ + ++ NG P+
Sbjct: 185 AFTATVTGIMCAYALFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 235
>gi|228987762|ref|ZP_04147873.1| hypothetical protein bthur0001_44310 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228772036|gb|EEM20491.1| hypothetical protein bthur0001_44310 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 266
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + +++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAEIEKKRLII---DCLLMLQEGTYPFIMKNRILGSLSATERKKLEKGAEK 263
>gi|322383006|ref|ZP_08056836.1| MotP-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321153029|gb|EFX45489.1| MotP-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 230
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ D + M++ G +++ E+D I + G P +GI+G ++G+
Sbjct: 72 FLRDGLMMVVDGTDPEL-TRQILELEMDSIEQQNEGMTKMFESAGGYSPTMGIIGTVMGL 130
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I +GNL + P LG AI V+ T TL G++ + + P+ ++I+ +Q ++ +
Sbjct: 131 IHVLGNL-EDPSALGPAIAVAFTATLYGVMAANVIYLPIGNKIRIRSKEQISQMELMLEG 189
Query: 245 LIAYMNGAIPQV 256
++A G PQ+
Sbjct: 190 ILALQAGENPQL 201
>gi|317178825|dbj|BAJ56613.1| flagellar motor protein MotA [Helicobacter pylori F30]
Length = 257
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 126 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 184
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ SY++ P ++K+ + ++ + ++ NG P+
Sbjct: 185 AFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 235
>gi|312793259|ref|YP_004026182.1| mota/tolq/exbb proton channel [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180399|gb|ADQ40569.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 265
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 24/255 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I GL + ++ F GNP L+Q +IV G + +++ P+ IK + L
Sbjct: 5 SIGGLILGFGSLLTAFIIEKGNPAKLLQISAALIVFGGTIAAVLVSFPMSQIKTAVKHLK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F K + + V++ L L +K E I + N + + V++ E
Sbjct: 65 MVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNIQNPLLKKGLGLVVDGIE- 120
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
I +++D E+ + E + G P +GI+G ++
Sbjct: 121 -----------------GEVIRDILDREVYLAEDELKEAAEVFEAAGGYAPTMGIIGTVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR-LYIIV 241
G+I + NL+ +P LG AI V+ TL G+ + + +IK T+ KQ R L I+
Sbjct: 164 GLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIK-TKAKQERMLNEII 221
Query: 242 KKALIAYMNGAIPQV 256
+ L++ G P++
Sbjct: 222 VEGLLSIQAGENPRI 236
>gi|302341788|ref|YP_003806317.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301638401|gb|ADK83723.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 279
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 128 DYMRMII--VGNAR-SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
++RM + V + R + +I +++E+D L + +S MG PA G+ G ++G+
Sbjct: 105 QFLRMAVAMVADERPAADIAQRLEQEMDFFLARRESQRAVLSFMGRLAPAFGLAGTMIGL 164
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I+ + LS P + + + V+L T G++++ + PL +LK+H V+ A
Sbjct: 165 IRMLHTLS-DPTAVASGMSVALLTTFYGLMIANLVVLPL-----ERKLKEHNRAEAVEMA 218
Query: 245 LI 246
LI
Sbjct: 219 LI 220
>gi|21242653|ref|NP_642235.1| flagellar motor protein [Xanthomonas axonopodis pv. citri str. 306]
gi|294624201|ref|ZP_06702922.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294665069|ref|ZP_06730374.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|21108122|gb|AAM36771.1| MotA protein [Xanthomonas axonopodis pv. citri str. 306]
gi|292601501|gb|EFF45517.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605150|gb|EFF48496.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 246
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + N+++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPEAMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
++ M NL+ P +LG I + T T+ GI + L P+ +++KS
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSV 210
>gi|308184600|ref|YP_003928733.1| flagellar motor protein MotA [Helicobacter pylori SJM180]
gi|308060520|gb|ADO02416.1| flagellar motor protein MotA [Helicobacter pylori SJM180]
Length = 257
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 126 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 184
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ SY++ P ++K+ + ++ + ++ NG P+
Sbjct: 185 AFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 235
>gi|297181725|gb|ADI17906.1| flagellar motor component [uncultured Desulfobacterales bacterium
HF0200_07G10]
Length = 257
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH-----MGESLPAIGIVGAILGIIK 186
M+I A+ I + ++ EID +K HAI M PA G++G ++G+++
Sbjct: 110 MLIADGAKEDLIRSTLNIEID-----SMKQRHAIQQDVFVKMAAFAPAFGMLGTLIGLVQ 164
Query: 187 AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+ NLS P +G ++ V+L T G ++ +C P+ ++K+ ++
Sbjct: 165 MLQNLSD-PDSVGPSMAVALLTTFYGSFFAFMICGPIAGKLKARTTRE 211
>gi|261839370|gb|ACX99135.1| flagellar motor protein MotA [Helicobacter pylori 52]
gi|297380014|gb|ADI34901.1| Chemotaxis protein motA [Helicobacter pylori v225d]
Length = 257
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 126 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 184
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ SY++ P ++K+ + ++ + ++ NG P+
Sbjct: 185 AFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 235
>gi|332702473|ref|ZP_08422561.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332552622|gb|EGJ49666.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 274
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ ++M++ G +R EI+ ++D I+ +++ M + PA GI+G ++G+
Sbjct: 107 FMRHAVQMLVDGYSRE-EIKEILDTRIEQGYEQEMSSASIYRTMAKLAPAFGIIGTLIGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I + +L + LG ++ V+LT TL G +L+Y L P+ +++ R+++ + + V +
Sbjct: 166 IGMLQSLQNNMASLGPSMAVALTTTLYGALLAYVLFLPIAIKVEK-RIEERVVLMQVIRD 224
Query: 245 LIAYMNGAIP-QVAIEYGRKVLPLSERPSIE 274
I +++ P + ++ + LP SI+
Sbjct: 225 GILFIHDKTPASIVLDKLKAYLPPRRWKSIQ 255
>gi|65321878|ref|ZP_00394837.1| COG1291: Flagellar motor component [Bacillus anthracis str. A2012]
gi|118479665|ref|YP_896816.1| flagellar motor protein MotA [Bacillus thuringiensis str. Al Hakam]
gi|228917150|ref|ZP_04080708.1| hypothetical protein bthur0012_43620 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228929559|ref|ZP_04092578.1| hypothetical protein bthur0010_42430 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935821|ref|ZP_04098633.1| hypothetical protein bthur0009_42660 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948235|ref|ZP_04110519.1| hypothetical protein bthur0007_43610 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229093608|ref|ZP_04224709.1| hypothetical protein bcere0021_43320 [Bacillus cereus Rock3-42]
gi|229124076|ref|ZP_04253268.1| hypothetical protein bcere0016_43610 [Bacillus cereus 95/8201]
gi|229186745|ref|ZP_04313903.1| hypothetical protein bcere0004_42870 [Bacillus cereus BGSC 6E1]
gi|118418890|gb|ABK87309.1| chemotaxis protein, MotA [Bacillus thuringiensis str. Al Hakam]
gi|228596758|gb|EEK54420.1| hypothetical protein bcere0004_42870 [Bacillus cereus BGSC 6E1]
gi|228659378|gb|EEL15026.1| hypothetical protein bcere0016_43610 [Bacillus cereus 95/8201]
gi|228689817|gb|EEL43623.1| hypothetical protein bcere0021_43320 [Bacillus cereus Rock3-42]
gi|228811593|gb|EEM57930.1| hypothetical protein bthur0007_43610 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228823878|gb|EEM69698.1| hypothetical protein bthur0009_42660 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830138|gb|EEM75756.1| hypothetical protein bthur0010_42430 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228842568|gb|EEM87658.1| hypothetical protein bthur0012_43620 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 266
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 150 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 208
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + +++ RL I L+ G P + L +ER +E A++
Sbjct: 209 NKLKQKSAAEIEKKRLII---DCLLMLQEGTYPFIMKNRILGSLSATERKKLEKGAEK 263
>gi|163854226|ref|YP_001642269.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
gi|163665831|gb|ABY33198.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
Length = 272
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEID---IILYEKLKPYHAISHMG 169
P LEN E++ F+ R I G R + I + M+ + D + L E K Y A G
Sbjct: 109 PIALENMEISDPFLAQGARYIADGYDRDF-IRDTMERDRDNFLMHLDEGSKIYRAF---G 164
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+ PA G++G ILG++ N+S P LG A+ +L TL G +++ + P+ ++
Sbjct: 165 DCAPAWGMIGTILGMVTMFANMSD-PSKLGPAMATALLATLYGALIANMITLPIADKL 221
>gi|312134919|ref|YP_004002257.1| mota/tolq/exbb proton channel [Caldicellulosiruptor owensensis OL]
gi|311774970|gb|ADQ04457.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor owensensis OL]
Length = 265
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 24/255 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I GL + ++ F GNP L+Q +IV G + +++ P+ IK + L
Sbjct: 5 SIGGLILGFSSLLIAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKTAVKHLK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F K + + +V++ L L +K E I + N + + V++ E
Sbjct: 65 MVFMDKKI---DFANVVEQLVQLSDRARKEGLLALEQEIPNLQNPLLKKGLGLVVDGIEG 121
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
I +++D E+ + E + G P +GI+G ++
Sbjct: 122 EV------------------IRDILDREVYLAEDELKEAAEVFEAAGGYSPTMGIIGTVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR-LYIIV 241
G+I + NL+ +P LG AI V+ TL G+ + + +IK T+ KQ R L I+
Sbjct: 164 GLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIK-TKAKQERMLNEII 221
Query: 242 KKALIAYMNGAIPQV 256
+ L++ G P++
Sbjct: 222 VEGLLSIQAGENPRI 236
>gi|30264579|ref|NP_846956.1| flagellar motor protein MotA [Bacillus anthracis str. Ames]
gi|47530049|ref|YP_021398.1| flagellar motor protein MotA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187404|ref|YP_030656.1| flagellar motor protein MotA [Bacillus anthracis str. Sterne]
gi|49478674|ref|YP_038564.1| flagellar motor protein MotA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140990|ref|YP_085839.1| flagellar motor protein MotA [Bacillus cereus E33L]
gi|165871522|ref|ZP_02216169.1| chemotaxis protein MotA [Bacillus anthracis str. A0488]
gi|167635574|ref|ZP_02393886.1| chemotaxis protein MotA [Bacillus anthracis str. A0442]
gi|167641683|ref|ZP_02399928.1| chemotaxis protein MotA [Bacillus anthracis str. A0193]
gi|170708377|ref|ZP_02898821.1| chemotaxis protein MotA [Bacillus anthracis str. A0389]
gi|177653128|ref|ZP_02935415.1| chemotaxis protein MotA [Bacillus anthracis str. A0174]
gi|190566888|ref|ZP_03019804.1| chemotaxis protein MotA [Bacillus anthracis Tsiankovskii-I]
gi|196034374|ref|ZP_03101783.1| chemotaxis protein MotA [Bacillus cereus W]
gi|196039359|ref|ZP_03106665.1| chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|196044776|ref|ZP_03112010.1| chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|218905737|ref|YP_002453571.1| chemotaxis protein MotA [Bacillus cereus AH820]
gi|225866486|ref|YP_002751864.1| chemotaxis protein MotA [Bacillus cereus 03BB102]
gi|227817294|ref|YP_002817303.1| chemotaxis protein MotA [Bacillus anthracis str. CDC 684]
gi|229600505|ref|YP_002868792.1| chemotaxis protein MotA [Bacillus anthracis str. A0248]
gi|254686998|ref|ZP_05150856.1| flagellar motor protein MotA [Bacillus anthracis str. CNEVA-9066]
gi|254724561|ref|ZP_05186344.1| flagellar motor protein MotA [Bacillus anthracis str. A1055]
gi|254736616|ref|ZP_05194322.1| flagellar motor protein MotA [Bacillus anthracis str. Western North
America USA6153]
gi|254741654|ref|ZP_05199341.1| flagellar motor protein MotA [Bacillus anthracis str. Kruger B]
gi|254754748|ref|ZP_05206783.1| flagellar motor protein MotA [Bacillus anthracis str. Vollum]
gi|254757580|ref|ZP_05209607.1| flagellar motor protein MotA [Bacillus anthracis str. Australia 94]
gi|30259237|gb|AAP28442.1| chemotaxis protein MotA [Bacillus anthracis str. Ames]
gi|47505197|gb|AAT33873.1| chemotaxis protein MotA [Bacillus anthracis str. 'Ames Ancestor']
gi|49181331|gb|AAT56707.1| chemotaxis protein MotA [Bacillus anthracis str. Sterne]
gi|49330230|gb|AAT60876.1| chemotaxis protein (motility protein A) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51974459|gb|AAU16009.1| chemotaxis motA protein (motility protein A) [Bacillus cereus E33L]
gi|164712819|gb|EDR18349.1| chemotaxis protein MotA [Bacillus anthracis str. A0488]
gi|167510390|gb|EDR85791.1| chemotaxis protein MotA [Bacillus anthracis str. A0193]
gi|167528994|gb|EDR91749.1| chemotaxis protein MotA [Bacillus anthracis str. A0442]
gi|170126752|gb|EDS95635.1| chemotaxis protein MotA [Bacillus anthracis str. A0389]
gi|172081652|gb|EDT66723.1| chemotaxis protein MotA [Bacillus anthracis str. A0174]
gi|190561879|gb|EDV15848.1| chemotaxis protein MotA [Bacillus anthracis Tsiankovskii-I]
gi|195992916|gb|EDX56875.1| chemotaxis protein MotA [Bacillus cereus W]
gi|196024264|gb|EDX62937.1| chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|196029986|gb|EDX68587.1| chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|218538314|gb|ACK90712.1| chemotaxis protein MotA [Bacillus cereus AH820]
gi|225789563|gb|ACO29780.1| chemotaxis protein MotA [Bacillus cereus 03BB102]
gi|227002544|gb|ACP12287.1| chemotaxis protein MotA [Bacillus anthracis str. CDC 684]
gi|229264913|gb|ACQ46550.1| chemotaxis protein MotA [Bacillus anthracis str. A0248]
Length = 264
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ GI Y L +P
Sbjct: 148 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGIFSGYVLWHPFA 206
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + +++ RL I L+ G P + L +ER +E A++
Sbjct: 207 NKLKQKSAAEIEKKRLII---DCLLMLQEGTYPFIMKNRILGSLSATERKKLEKGAEK 261
>gi|322432962|ref|YP_004210211.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321165189|gb|ADW70893.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 267
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST++G+ + ++ G GG ++QP +IV G LG ++ P++ I+ + L
Sbjct: 9 STVVGVMLAGAGVVAGLLLDGGTVRQILQPTAALIVVGGTLGAVMIQFPMQTIRSTIKEL 68
Query: 62 LE-IFGYKALGQD------TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIP 114
+ K L ++ ++C L+ + M L D Y +P
Sbjct: 69 RHALLDAKPLNRELVEELVSWC--LQARRMGMLAL-------------DAY-------LP 106
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+ + F M M+ V E+ + ++ ++D+ + + G P
Sbjct: 107 QIAD-----PFFRKGM-MLAVDGVGVRELRDTLEVDLDVWHEREAGVAKVLEAAGGFAPT 160
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+GI+GA+LG+I+ M + +I G I V+ TL GI L+ + PL ++K R+++
Sbjct: 161 LGIIGAVLGLIQVMQRMDNVGEI-GKGIAVAFVSTLYGIGLANLVFLPLAGKLK-IRMRE 218
Query: 235 HRLYI-IVKKALIAYMNG 251
+L + +A+++ M G
Sbjct: 219 RQLVREMTLEAVVSIMEG 236
>gi|256830502|ref|YP_003159230.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
gi|256579678|gb|ACU90814.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
Length = 251
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 119/273 (43%), Gaps = 31/273 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ + +I A+GG+ ++ + ++IV G +G ++ PL+ +
Sbjct: 3 LATIIGILVAFGLVIA---ALGGDGFLFLDFSSLLIVIGGTIGAVLVTYPLESVLGVARI 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F KA D ++ +++ E H+ + IP
Sbjct: 60 IKKTFMSKA---DDPTALIAQFSDYATRVRREGILSLEAHLKN---------IPD----- 102
Query: 121 ELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
D++R + V I+ +M+ EI + LK + G PA+G+
Sbjct: 103 -------DFLRKGLQLTVDGLDPQLIQEIMETEISCLEERHLKGAEILQTFGNLAPAMGM 155
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G++ + ++ P +G A+ V+L T G +++ + P+ ++++ ++ +
Sbjct: 156 IGTVIGLVLMLKRMND-PSTIGPAMAVALLTTFYGAVMANLIFIPMAGKLRARSREEVLV 214
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ + +++ G P++ E LP ER
Sbjct: 215 RSMIVEGIMSISRGENPRILEEKLNSYLPPKER 247
>gi|182418693|ref|ZP_02626763.2| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237669679|ref|ZP_04529656.1| chemotaxis protein MotA [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377470|gb|EDT75025.1| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237654753|gb|EEP52316.1| putative chemotaxis protein MotA [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 260
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 73/136 (53%), Gaps = 12/136 (8%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-----SHMGESLPAIGIVG 179
F+ + M++ G +E+ + +E+ I E ++ H + S G + P +G++G
Sbjct: 108 FMKKGLEMVVDG------MESDIIKEVLEIEIESMEERHRLGATVFSTAGGTAPTLGVLG 161
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++G+I A+GNL+ K LG +I + T+ GI Y + +P ++++K L++ +
Sbjct: 162 AVIGLIGALGNLNDIDK-LGESISSAFVATVYGIFCGYLIFHPFSNRLKRKSLEEIKNMN 220
Query: 240 IVKKALIAYMNGAIPQ 255
I+ + ++A G P+
Sbjct: 221 IILEGVLAIQAGNNPK 236
>gi|225569969|ref|ZP_03778994.1| hypothetical protein CLOHYLEM_06064 [Clostridium hylemonae DSM
15053]
gi|225161439|gb|EEG74058.1| hypothetical protein CLOHYLEM_06064 [Clostridium hylemonae DSM
15053]
Length = 274
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 36/258 (13%)
Query: 10 TILCIIGGFY------AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
T+L ++GGF GG I I+IV G L + + P ++K+ G +
Sbjct: 5 TLLGVVGGFAFIVNAIMQGGKIGSFIDVASIMIVVGGTLCAVIASFPFNMLKNVGKHFTK 64
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ K + D+L L + E N +DDP+ +
Sbjct: 65 LLSNKKFQVEPVIDMLVEFAQLARKNGLLALEEKANQLDDPFF-------------KQGI 111
Query: 124 TFICDYMRMIIVGNARSYEIENLMDE-EIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
+ D M V E++++ E +I +YEK Y PA G++G ++
Sbjct: 112 MLVVDAMEADKVREMLETEVDSMSQRHEEEIAIYEKAAGYA---------PAFGMIGTLV 162
Query: 183 GII---KAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G+I K+M +LSQ S LG ++ +L T G I++ + P+ +++ R ++ LY
Sbjct: 163 GLINMLKSM-DLSQGSSSTLGESMATALVTTFYGCIMANLMFMPIAKKLR-IRNEEEILY 220
Query: 239 I-IVKKALIAYMNGAIPQ 255
I+ + +I +G P+
Sbjct: 221 KQIIIEGVIGIQSGENPK 238
>gi|288942613|ref|YP_003444853.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288897985|gb|ADC63821.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 247
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N E F+ +++++ G A + +++ ++D L+ MG P +GI+
Sbjct: 101 NKEPDPFVRKGLQLLVDG-AEPQTLRQILESDLDNSESFDLQGARVFESMGVYSPTLGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G++ M NL++ P LG I + T+ G+ L+ P+++++KS +
Sbjct: 160 GAVMGLMAVMQNLTE-PSKLGQGIAAAFVATIYGVGLANLFFLPVSNKLKSIVQARVNHQ 218
Query: 239 IIVKKALIAYMNGAIPQ 255
++ + LIA G P+
Sbjct: 219 TMLLEGLIAIAEGENPR 235
>gi|258621631|ref|ZP_05716663.1| flagellar motor protein [Vibrio mimicus VM573]
gi|258624382|ref|ZP_05719330.1| flagellar motor protein [Vibrio mimicus VM603]
gi|262165142|ref|ZP_06032879.1| Flagellar motor rotation protein MotA [Vibrio mimicus VM223]
gi|262172095|ref|ZP_06039773.1| Flagellar motor rotation protein MotA [Vibrio mimicus MB-451]
gi|258583344|gb|EEW08145.1| flagellar motor protein [Vibrio mimicus VM603]
gi|258586103|gb|EEW10820.1| flagellar motor protein [Vibrio mimicus VM573]
gi|261893171|gb|EEY39157.1| Flagellar motor rotation protein MotA [Vibrio mimicus MB-451]
gi|262024858|gb|EEY43526.1| Flagellar motor rotation protein MotA [Vibrio mimicus VM223]
Length = 254
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSL 219
K G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +LS +
Sbjct: 138 KGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMD-DPKSIGPAMAVALLTTLYGAVLSNMI 196
Query: 220 CNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
P+ ++ R ++ ++ ++A +G P+V Y + L S+R
Sbjct: 197 FFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNASKR 247
>gi|89100105|ref|ZP_01172974.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
gi|89085195|gb|EAR64327.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
Length = 272
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYIL--IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
T IGLFI ++ G GG L + P ++I+ G + G +++ PL+ IK S
Sbjct: 8 TPIGLFIGFAMLVFGIMTNGGFSGFLSFVDPASMLIILGGLISGLLVSFPLRDIKHS--- 64
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Q D L I+ +K + E + S+ T +E
Sbjct: 65 ------FTVVRQSFSNDEKNLAEIIDVFVKLSDKARREGLL----------SLETEIEQM 108
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E FI + ++ V I ++M+ EI + K + GE PA G++G
Sbjct: 109 E-DPFIRKGV-LLAVDGLEPDVINDIMNAEIAAMEERHRKGRSILEKAGEYAPAWGMIGT 166
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + NL+ P LG + ++L TL G +L+ + P+ +++ K+ L I
Sbjct: 167 LIGLVLMLKNLN-DPASLGPNMAIALLTTLYGSLLANLVFLPMAAKLLLKTEKEVFLKQI 225
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V + ++ G P++ E L ER
Sbjct: 226 VIEGVLGVQAGQNPRLLEEKLGAFLSAQER 255
>gi|332702328|ref|ZP_08422416.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332552477|gb|EGJ49521.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 253
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+ +M+ EI + + MG PA+G++G ++G++ + +S P +G A+
Sbjct: 123 IQEIMETEIHYLESRHETGAEILGAMGNYAPALGMIGTVIGLVAMLSTMSD-PSTIGPAM 181
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+L T G +L+ + NP+ ++K ++ L +V + ++A G P++ E
Sbjct: 182 AVALITTFYGALLANLVFNPMAGKLKLRSRQEVLLREMVLEGILAISKGENPRIIEEKLN 241
Query: 263 KVLPLSER 270
L SER
Sbjct: 242 SYLAPSER 249
>gi|239628982|ref|ZP_04672013.1| YtxD [Clostridiales bacterium 1_7_47_FAA]
gi|239519128|gb|EEQ58994.1| YtxD [Clostridiales bacterium 1_7_47FAA]
Length = 286
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH-----MGESLPAIGIVGAILGIIK 186
M++V + S ++ M+ E+ E+L HA+ PA G++G ++G+I
Sbjct: 120 MLVVDSVDSEKVRKAMETEL-----EQLDERHALDRRFYEKAASYAPAFGMIGTLVGLIL 174
Query: 187 AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
+GN+S L + V+L TL G +L+ + P+ S++K+ ++ +V + ++
Sbjct: 175 MLGNMSDVDA-LAKGMAVALITTLYGSLLANIIFLPMASKLKARHEEEFLCKQLVMEGVL 233
Query: 247 AYMNGAIPQVAIEYGRKVLPLS 268
A G P+ E K+LP S
Sbjct: 234 AIQEGENPKFIEEKLFKLLPAS 255
>gi|330445279|ref|ZP_08308931.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489470|dbj|GAA03428.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 215
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
S G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +L+ + P+
Sbjct: 106 SSFGDVAPAMGMIGTLIGLVAMLSNMD-DPKSIGPAMAVALLTTLYGSMLANMVAIPIAD 164
Query: 226 QIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ + R +Q RL ++ ++A +G P+V Y + L +R SI
Sbjct: 165 KL-TLRKEQERLNKRLILDGVLAIQDGQNPRVIDGYLKNYLHEKKRSSI 212
>gi|332669203|ref|YP_004452211.1| MotA/TolQ/ExbB proton channel [Cellulomonas fimi ATCC 484]
gi|332338241|gb|AEE44824.1| MotA/TolQ/ExbB proton channel [Cellulomonas fimi ATCC 484]
Length = 261
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 30/267 (11%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IGL + ++ I G G P ++ P +++V LG + + L+ K+S ++
Sbjct: 6 VIGLVVALVAIFGAMILEGAQPMSIMLPAPLLLVWVGTLGVGLAGHTLRDAKESFAAVPR 65
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLENNE 121
++ D V L+ + ++G + + IDD + + + ++
Sbjct: 66 AL--RSGIPDPTQTVDTLVSLADRARREGLLALEDAARSIDDQFLRAGLQAAIDGTDPDD 123
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAIGIVG 179
L T + D + R+ E HA MG P IGI+G
Sbjct: 124 LRTILEDR-----IATKRARE------------------RAHAKYFQDMGGYAPTIGIIG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++ ++ + NLS P LG +I + TL GI+ + + PL ++IK +
Sbjct: 161 TVISLVHVLENLSD-PASLGHSIAAAFVATLWGILSANVVWLPLGTRIKRISDLECTQME 219
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLP 266
+ + L+A GA P++ E R +LP
Sbjct: 220 MTLEGLLAVQAGANPRLVGERLRSLLP 246
>gi|170688312|ref|ZP_02879522.1| chemotaxis protein MotA [Bacillus anthracis str. A0465]
gi|170667818|gb|EDT18571.1| chemotaxis protein MotA [Bacillus anthracis str. A0465]
Length = 264
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G P +G++GA++G++ A+GNL+ K LG AI + T+ G+ Y L +P
Sbjct: 148 FSQAGTYAPTLGVLGAVIGLVAALGNLTDIEK-LGHAISGAFIATIFGVFSGYVLWHPFA 206
Query: 225 SQIK---STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++K + +++ RL I L+ G P + L +ER +E A++
Sbjct: 207 NKLKQKSAAEIEKKRLII---DCLLMLQEGTYPFIMKNRILGSLSATERKKLEKGAEK 261
>gi|308071043|ref|YP_003872648.1| hypothetical protein PPE_04350 [Paenibacillus polymyxa E681]
gi|305860322|gb|ADM72110.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 275
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + ++++I G + +I+ +++ E+D I ++ G P +GI+G ++G+
Sbjct: 107 FLREGLQLVIDGTEQE-QIKQILELELDAIEHKHEGYAKIFESAGGYAPTMGIIGTVMGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I +G+L++ P LG +I V+ TL G+ + + P+ S+I++ + ++ +
Sbjct: 166 IHVLGSLTE-PTALGPSIAVAFIATLYGVASANLIFLPIASKIRAASESEIITMDLLLQG 224
Query: 245 LIAYMNGAIPQV 256
++A NG P++
Sbjct: 225 ILAIQNGENPKL 236
>gi|145298368|ref|YP_001141209.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851140|gb|ABO89461.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 245
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E F + MI+ G + +I L++ +IDI MG P IGI+
Sbjct: 98 DQESDEFTRQGLTMIVDGVSIE-DIRMLLEADIDIEQERNEHSARVFEAMGGYSPTIGII 156
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
GA++G+I+AM NL + P LG I V+ T+ G+ + P+ +++++
Sbjct: 157 GAVIGLIQAMFNL-EDPAALGAGIAVAFVATIYGVGFANLFYLPIANRLRA 206
>gi|28897463|ref|NP_797068.1| flagellar motor protein PomA [Vibrio parahaemolyticus RIMD 2210633]
gi|260364263|ref|ZP_05776962.1| chemotaxis protein PomA [Vibrio parahaemolyticus K5030]
gi|260876423|ref|ZP_05888778.1| chemotaxis protein PomA [Vibrio parahaemolyticus AN-5034]
gi|260898694|ref|ZP_05907190.1| chemotaxis protein PomA [Vibrio parahaemolyticus Peru-466]
gi|260902771|ref|ZP_05911166.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ4037]
gi|4322000|gb|AAD15904.1| sodium-driven polar flagellar protein [Vibrio parahaemolyticus]
gi|28805675|dbj|BAC58952.1| sodium-driven polar flagellar protein MotA [Vibrio parahaemolyticus
RIMD 2210633]
gi|308086852|gb|EFO36547.1| chemotaxis protein PomA [Vibrio parahaemolyticus Peru-466]
gi|308092978|gb|EFO42673.1| chemotaxis protein PomA [Vibrio parahaemolyticus AN-5034]
gi|308106856|gb|EFO44396.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ4037]
gi|308113752|gb|EFO51292.1| chemotaxis protein PomA [Vibrio parahaemolyticus K5030]
gi|328472527|gb|EGF43390.1| flagellar motor protein PomA [Vibrio parahaemolyticus 10329]
Length = 253
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +LS L P+ ++
Sbjct: 147 GDVAPAMGMIGTLVGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAVLSNMLFFPIADKLS 205
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEY-------GRKVLPLSE 269
R ++ ++ ++A +G P+V Y G++ L + E
Sbjct: 206 LRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEGKRALEIDE 253
>gi|317153384|ref|YP_004121432.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316943635|gb|ADU62686.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 250
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 111/262 (42%), Gaps = 31/262 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + + MGGN + I IV G + PL V+ +
Sbjct: 3 IATLIGLVGAFGLVFAAIF-MGGNAAGFVDIPSIAIVVGGTFAVTFVMFPLGVV----IG 57
Query: 61 LLEIFGYKAL--GQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVL 117
+++ G K L + ++++L+ L +K S E IDDP+ L
Sbjct: 58 TIKV-GLKTLMIKSNDPQNIIRLITSLADTARKQSLVSLEKVAIDDPF-----------L 105
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+ M++V + + ++M+ E+D + + MG PA G+
Sbjct: 106 KKGV----------MLVVDGSSETLVRSVMEIELDFMRQRHRQGQSVFKGMGTMAPAFGM 155
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G++ + NLS P +G A+ V+L T G +L+ + P+ ++++ +
Sbjct: 156 IGTLIGLVNMLSNLSD-PSSIGPAMAVALLTTFYGAVLANCVFLPMATKLEERSAEDALF 214
Query: 238 YIIVKKALIAYMNGAIPQVAIE 259
I+ + + + G P V E
Sbjct: 215 MQIMIEGVASLQRGDHPTVVKE 236
>gi|332307429|ref|YP_004435280.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174758|gb|AEE24012.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 254
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +L+ +C P+ ++
Sbjct: 146 MGDVAPAMGMIGTLIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVLANVVCLPIAEKL 204
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ +++ ++ +I +G P+V + L S+R S
Sbjct: 205 GNRAVEEKLNQSLILDGIIGIADGQNPRVIEGILKNYLAASKRGS 249
>gi|323495110|ref|ZP_08100197.1| flagellar motor protein PomA [Vibrio brasiliensis LMG 20546]
gi|323310661|gb|EGA63838.1| flagellar motor protein PomA [Vibrio brasiliensis LMG 20546]
Length = 254
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 152 DIILYEKLKPYHA--ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
DI L ++ + + G+ PA+G++G ++G++ + N+ PK +G A+ V+L T
Sbjct: 128 DIALTDERHDFGSSVFRAFGDVAPAMGMIGTLVGLVAMLSNMDD-PKAIGPAMAVALLTT 186
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLS 268
L G ILS + P+ ++ S R +Q +L ++ ++A +G P+V Y + L
Sbjct: 187 LYGAILSNMVFFPIADKL-SLRREQEKLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEG 245
Query: 269 ER 270
+R
Sbjct: 246 KR 247
>gi|34496476|ref|NP_900691.1| flagellar motor protein [Chromobacterium violaceum ATCC 12472]
gi|34102330|gb|AAQ58696.1| chemotaxis motA protein [Chromobacterium violaceum ATCC 12472]
Length = 249
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F M+M++ G + +M+ EI + + + + G P +GI+GA+LG+
Sbjct: 107 FTKKAMQMLVDGT-EPDTLRAVMEVEISMFEHARRQAARIWESAGGYAPTMGILGAVLGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I M NLS P LG I V+ T+ G+ + P+ +++K + + +V +
Sbjct: 166 IHVMENLS-DPSKLGGGIAVAFVATVYGVGSANLFFLPMANKLKHLVASELAMKELVVEG 224
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSE 269
++A NG P++ R L + E
Sbjct: 225 VVAIANGENPRIIESRLRGFLAMHE 249
>gi|83593141|ref|YP_426893.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83576055|gb|ABC22606.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 266
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E+ ++ ++ ++ P + +MG + PA G++G ++G+I ++ +P +G
Sbjct: 128 EVREILANTVENTFQRQVVPAEILRNMGGTAPAFGMIGTLVGLIIMFDSMGSNPGSMGAG 187
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIK 228
+ V+LT TL G++ + L P S++K
Sbjct: 188 LAVALTATLYGLLSARLLFLPAASKVK 214
>gi|109897647|ref|YP_660902.1| flagellar motor protein PomA [Pseudoalteromonas atlantica T6c]
gi|109699928|gb|ABG39848.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
Length = 254
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +L+ +C P+ ++
Sbjct: 146 MGDVAPAMGMIGTLIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVLANVVCLPIAEKL 204
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ +++ ++ +I +G P+V + L S+R S
Sbjct: 205 GNRAVEEKLNQSLILDGIIGIADGQNPRVIEGILKNYLAASKRGS 249
>gi|323706055|ref|ZP_08117625.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534669|gb|EGB24450.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 272
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGG----FVMANPLKVIKDS 57
ST++G+ + +I F GG+ LI +IV G +G F M + LK+ K
Sbjct: 4 STLLGILLGFGSLILAFVMEGGSVASLIGVSAALIVLGGTIGATMTSFSMKDMLKLPKLI 63
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
G + +K G + Y D++K L +R+E S+ L
Sbjct: 64 GKA------FKEEG-NKYGDIIKYFVYLAQK----ARSEG------------LLSLEQEL 100
Query: 118 ENNELTTF---ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+++E+ + + D + ++I G A I M+ I I E + G P
Sbjct: 101 QSDEIKNYDPILKDCIELVIDG-ADIELIRTTMENRIYIEDKELKREASIFEAAGGYSPT 159
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS-TRLK 233
+GI+G ++G++ +GNLS+ P LG +I V+ TL G+ ++ + P+ +++K+ ++K
Sbjct: 160 MGIIGTVMGLVHVLGNLSE-PDKLGPSIAVAFIATLYGVSMANLVWLPIGNKLKNKAQIK 218
Query: 234 QHRLYIIVKKAL 245
+ II++ +L
Sbjct: 219 KTEKEIILEGSL 230
>gi|289208359|ref|YP_003460425.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
gi|288943990|gb|ADC71689.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
Length = 247
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
EN+E F +++++ G+ I +++ ++D + + MG P +GI
Sbjct: 103 ENDE---FARKGLQLLVDGS-EPQTIRQILEADLDNREHFDTQGAKVFESMGVYAPTLGI 158
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
VGA++G++ M NL+ P LG I + T+ GI + L P+ +++KS K+ +
Sbjct: 159 VGAVMGLMAVMQNLA-DPSKLGAGIAAAFVATIYGIASANLLFLPVANKLKSIIQKRSQH 217
Query: 238 YIIVKKALIAYMNGAIPQ 255
+++ + LI+ G P+
Sbjct: 218 QLMLMEGLISIAEGENPR 235
>gi|78043109|ref|YP_359810.1| chemotaxis motA protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77995224|gb|ABB14123.1| chemotaxis motA protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 267
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 119 NNELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
N+L D++R +IV ++++ EI I G P +
Sbjct: 97 ENDLPNIKDDFLRRGLQLIVDGTDPELFRSILENEIYAIAERHRAGAEFFEAAGGYAPTM 156
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
GI+G ++G++ +G LS +P+ LG AI ++ T TL G+ + L P ++++K+ K+
Sbjct: 157 GIIGTVMGLVHVLGQLS-TPEKLGPAIAMAFTATLYGVSSANILWLPFSAKLKNLSKKEL 215
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVL 265
+ ++ + L++ G P + E R L
Sbjct: 216 LVREMMLEGLVSLQEGHNPMLIEEKLRSFL 245
>gi|238024906|ref|YP_002909138.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237879571|gb|ACR31903.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
Length = 254
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 22/245 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I GF GG+ LIQ VIV G LG ++ N D GV L
Sbjct: 5 TLFGVVFGVAAIAAGFTLEGGHFASLIQLQAFVIVLGGTLGAVMIQNTWSRFFD-GVKQL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ K D L L+ G + + + F SI T +
Sbjct: 64 RLAFVKVRPVDQQS--------LAVLLEWGDQAKLNGMM-------AFESIDTA----GI 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
+ F + ++ G + + +E+ + E+D + G P GI+GA+L
Sbjct: 105 SPFAKRGLELLANGVSTAV-LEDALQRELDAYQRNHMTAARIWQQAGGYAPTFGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ ++ + P LG I V+ TL G+ L+ + P+ +I++ + R + +
Sbjct: 164 GLIQVTSHMLE-PAQLGQGIAVAFVATLYGLALANLVFLPIHGKIRAQIESEMRFQTLYR 222
Query: 243 KALIA 247
L+A
Sbjct: 223 DGLLA 227
>gi|121997147|ref|YP_001001934.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121588552|gb|ABM61132.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
Length = 288
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
++ ++ EE+++ + MGE PA G++G ++G+++ +GNL + P+ +G +
Sbjct: 142 VQRILREELELSMQRHEVGQRIFRSMGEQAPAFGMIGTLVGLVQMLGNL-EDPEAIGPGM 200
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
V+L TL G + + + P+ ++ ++H
Sbjct: 201 AVALLTTLYGALFAQLVALPIADNLEVRAQQEH 233
>gi|285018159|ref|YP_003375870.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
gi|283473377|emb|CBA15882.1| probable flagellar motor protein [Xanthomonas albilineans]
Length = 246
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ +F+ ++M++ G I ++++ +++ + L MG P +GI+G
Sbjct: 102 QQQDSFVRKGLQMLVDG-VEPDAIRHMLEIDLEGQAHRDLAAAKVFEGMGIYAPTLGIIG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
A+LG+I M NL+ P LG I + T T+ GI + L P+ S++KS
Sbjct: 161 AVLGLIAVMKNLA-DPSKLGQGIAAAFTATIYGIASANLLFLPMASKLKSV 210
>gi|283853197|ref|ZP_06370450.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
gi|283571455|gb|EFC19462.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
Length = 252
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 36/250 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T +GL I ++G + MGG + ++IV G L +A PL+ + + +
Sbjct: 3 LGTFLGLASGIALVLGAIF-MGGTLMEFVNVPSVMIVVGGTLASICVAYPLEEVFQAFSA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE----TEN-HIDDPYNSTIFTSIPT 115
+++IF + + + +M + + SR E EN H D+ TI
Sbjct: 62 MMQIFSSRKVKDAEVVN-------MMVRIAEISRREGLIALENIHTDN----TILKKACQ 110
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
++ +N I + +R+ I R + + +++ L Y P+
Sbjct: 111 LIADNADPALIRETVRIEIGSMKRRHAVGE--------AVFKSLAGYA---------PSF 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ + L PK LG ++ V++ T G +LS L P+ +++S L +
Sbjct: 154 GMIGTLIGLVQMLTRL-DDPKTLGPSMAVAIITTFYGSMLSTLLFLPVAGKLRSRTLNET 212
Query: 236 -RLYIIVKKA 244
+L II + A
Sbjct: 213 LQLEIIFEGA 222
>gi|254779212|ref|YP_003057317.1| flagellar motor protein MotA [Helicobacter pylori B38]
gi|254001123|emb|CAX29078.1| Chemotaxis protein MotA (Motility protein A); putative membrane
protein [Helicobacter pylori B38]
Length = 257
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 126 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 184
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ T T+ GI+ +Y++ P ++K+ + ++ + ++ NG P+
Sbjct: 185 AFTATVTGIMCAYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPR 235
>gi|119897399|ref|YP_932612.1| flagellar motor protein [Azoarcus sp. BH72]
gi|119669812|emb|CAL93725.1| flagellar motor protein MotA [Azoarcus sp. BH72]
Length = 246
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 115/257 (44%), Gaps = 28/257 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++GL + + I+ G GG+ L+QP +IV G LG ++ +PL+V K+
Sbjct: 5 SLVGLTLGVAAILIGQAMEGGHIASLLQPTAFLIVIGGTLGAVMLQSPLRVFKEGMRMAK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F A ++ +++ + N +R E ++ IP + +
Sbjct: 65 WVFITPA---TSHAQLIQQVT----NWSHVARKEGLLALE--------AQIPRLPD---- 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ ++M++ G + +++ EI + + G P +GI+GA++
Sbjct: 106 -PFMRKGLQMLVDG-VEPGRLREVLEVEIGAWEAQLRQCARIWESAGGYAPTVGILGAVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRLYI 239
G+I M NLS P LG+ I V+ T+ G+ + + P+ ++ + T + Q +++
Sbjct: 164 GLIHVMENLS-DPAKLGSGIAVAFVATIYGVGSANLIFLPIAKKLLAHIGTLVAQREMFV 222
Query: 240 IVKKALIAYMNGAIPQV 256
L+ NG P++
Sbjct: 223 ---DGLVGIANGDNPRI 236
>gi|254509022|ref|ZP_05121127.1| flagellar motor protein [Vibrio parahaemolyticus 16]
gi|323498630|ref|ZP_08103622.1| flagellar motor protein PomA [Vibrio sinaloensis DSM 21326]
gi|219548057|gb|EED25077.1| flagellar motor protein [Vibrio parahaemolyticus 16]
gi|323316328|gb|EGA69347.1| flagellar motor protein PomA [Vibrio sinaloensis DSM 21326]
Length = 254
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 152 DIILYEKLKPYHA--ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
DI L ++ + + G+ PA+G++G ++G++ + N+ PK +G A+ V+L T
Sbjct: 128 DIALTDERHDFGSSVFRAFGDVAPAMGMIGTLVGLVAMLSNMDD-PKSIGPAMAVALLTT 186
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLS 268
L G ILS + P+ ++ S R +Q +L ++ ++A +G P+V Y + L
Sbjct: 187 LYGAILSNMVFFPIADKL-SLRREQEKLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEG 245
Query: 269 ER 270
+R
Sbjct: 246 KR 247
>gi|319651876|ref|ZP_08006000.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
gi|317396435|gb|EFV77149.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
Length = 272
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL--IQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M T GL + + +I G GG L + P I+IV G + G +++ PLK I+
Sbjct: 6 MLTPAGLMVGLAMLIFGIMWNGGADGFLSFVDPSSILIVLGGLIAGLLVSFPLKDIRHMA 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN-----ETE-NHIDDPY-NSTIFT 111
++F + V +L+ I + ++ R E E ++DP+ ++
Sbjct: 66 TVFKQVFSSEE------QSVGELIGIFVKLSERARREGLLSLEAEIGKVEDPFIQKGVYL 119
Query: 112 SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES 171
++ + E + +T ++M+ EI + K + GE
Sbjct: 120 AVDGI-EPDVIT---------------------DIMNAEIMAMEERHRKGRSILERAGEY 157
Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
PA G++G ++G++ + NL+ P LG + ++L TL G +L+ + P+ +++
Sbjct: 158 APAWGMIGTLIGLVLMLKNLN-DPSTLGPNMALALLTTLYGSLLANLIFLPMAAKLALKT 216
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
K+ L I+ + +I +G P++ E L ER ++ E
Sbjct: 217 EKEVFLKQIIIEGVIGVQSGQNPRILEEKLSAFLSSEERRDLDKAVNE 264
>gi|134094540|ref|YP_001099615.1| chemotaxis motA protein [Herminiimonas arsenicoxydans]
Length = 226
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ +R+I+ G +++ ++D EI ++ G P IGI+GA+LG+
Sbjct: 87 FVAHGLRLIVDG-VDPHKLREVLDMEIGAYETQQRLSIKIWEAAGGYAPTIGILGAVLGL 145
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
I M NLS P LG+ I V+ T+ G+ + + P++S++K+
Sbjct: 146 IHVMENLSD-PSRLGSGIAVAFVATIYGVGFANLVFLPISSKLKA 189
>gi|24373102|ref|NP_717145.1| flagellar motor protein PomA [Shewanella oneidensis MR-1]
gi|24347291|gb|AAN54589.1|AE015599_1 chemotaxis motA protein [Shewanella oneidensis MR-1]
Length = 255
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
Query: 150 EIDIILYEK-----LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E DI L E + + A + +G PA+G++G ++G++ + N+S PK +G ++ V
Sbjct: 126 EKDITLTEDRHRIGIAIFRAFADVG---PAMGMIGTLVGLVAMLANMSD-PKSIGPSMAV 181
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRK 263
+L TL G +L+ +C P+ ++ S R+ + L ++ A++A +G P+V + +
Sbjct: 182 ALLTTLYGAVLANMVCIPIADKL-SLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKN 240
Query: 264 VLPLSER 270
L +R
Sbjct: 241 YLAEKQR 247
>gi|170755265|ref|YP_001782269.1| chemotaxis MotA protein [Clostridium botulinum B1 str. Okra]
gi|169120477|gb|ACA44313.1| chemotaxis protein MotA [Clostridium botulinum B1 str. Okra]
Length = 270
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + II G G N + + I G L ++ P+ K V ++
Sbjct: 8 TPIGLVLCFGLIIWGMATGGSNLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLLVVIV 67
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F + + DV++ +L + +R E ++D N N
Sbjct: 68 QTFKDNGM---SNIDVIQNFV----DLSRKARREGLLSLEDAIN-------------NLT 107
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +RM++ G I ++M+ EID + + G PA G++G ++
Sbjct: 108 DDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLI 166
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ S I + +G +L T G +++ + NP+ + + + +V
Sbjct: 167 GLIQMLANLTDSSTI-ASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREMVL 225
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P++ E L +ER
Sbjct: 226 EGVLAIQSGVNPRIMEEKLVSYLSPTER 253
>gi|27363787|ref|NP_759315.1| flagellar motor protein PomA [Vibrio vulnificus CMCP6]
gi|37679055|ref|NP_933664.1| flagellar motor protein PomA [Vibrio vulnificus YJ016]
gi|320157196|ref|YP_004189575.1| flagellar motor rotation protein MotA [Vibrio vulnificus MO6-24/O]
gi|27359904|gb|AAO08842.1| Flagellar motor rotation protein motA [Vibrio vulnificus CMCP6]
gi|37197797|dbj|BAC93635.1| flagellar motor component [Vibrio vulnificus YJ016]
gi|319932508|gb|ADV87372.1| flagellar motor rotation protein MotA [Vibrio vulnificus MO6-24/O]
Length = 253
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++
Sbjct: 147 GDVAPAMGMIGTLVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAILSNMVFFPIADKLA 205
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
R ++ ++ ++A +G P+V Y + L S+R
Sbjct: 206 LRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNESKR 247
>gi|87119462|ref|ZP_01075359.1| chemotaxis MotA protein [Marinomonas sp. MED121]
gi|86164938|gb|EAQ66206.1| chemotaxis MotA protein [Marinomonas sp. MED121]
Length = 246
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 24/254 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQ-PFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
T+ GLF+ ++ GG +L P I+++ G+ V +N L+ + +SL
Sbjct: 5 TLAGLFLAFASVVLSNLLGGGEMILLFNLPSAIIVIFGSLGAALVQSNILEATRS--LSL 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
L + + + + + +L+Y L ++ S E+ + N
Sbjct: 63 LRWALFPPVFE--FSNARELIYKLANQARRHSVVSLESEL------------------NS 102
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L + + + A L+ +E+ +++ + +G P +GI+G++
Sbjct: 103 LNDSFSERALQMAIDGADPESFSELLHDEVMRFRDKRMASVDFLESIGGYAPTLGIMGSV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+AM NL SP+ LG I V+ TL G + + P+ ++ + K+ Y +V
Sbjct: 163 LGLIQAMANL-DSPEALGHGIAVAFVSTLYGQGFANLIIFPIAKKLTNYVDKETLYYQLV 221
Query: 242 KKALIAYMNGAIPQ 255
+ G P
Sbjct: 222 VDGVYGIATGKNPH 235
>gi|283853399|ref|ZP_06370645.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
gi|283571212|gb|EFC19226.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
Length = 264
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ ++M++ G +R EI+ ++D I+ ++L M + PA G++G ++G+
Sbjct: 107 FLQSAIQMLVDGYSRE-EIQEILDTRIEQTYQQELSSAGIYRTMAKLAPAYGMIGTLIGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I M ++S LG + V+LT TL GI+L+ + P+ +++ R+++ + + V +
Sbjct: 166 IGMMQSMSVGLGNLGAHMAVALTTTLYGILLANLILLPIAIKVEK-RIEERIILMCVIRD 224
Query: 245 LIAYMNGAIP-QVAIEYGRKVLPLSERPSIE 274
++ P + ++ + LP SIE
Sbjct: 225 GTLFIKDKTPAAIVLDKLKAYLPTRRWSSIE 255
>gi|303249000|ref|ZP_07335245.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302489586|gb|EFL49526.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 259
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ ++M++ G +R EI+ ++D I+ ++L M + PA GI+G ++G+
Sbjct: 107 FLQSAIQMLVDGYSRE-EIQEILDTRIEQTYQQELSSAGIYRTMAKLSPAYGIIGTLIGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I M ++S LG + V+LT TL GI+L+ + P+ +++ R+++ + + V +
Sbjct: 166 IGMMQSMSVGLGNLGAHMAVALTTTLYGILLANLIFLPIAVKVEK-RIEERVILMCVIRD 224
Query: 245 LIAYMNGAIP-QVAIEYGRKVLPLSERPSIE 274
++ P + ++ + LP +IE
Sbjct: 225 GTLFIKDKTPAAIVLDKLKAYLPTRRWAAIE 255
>gi|83311657|ref|YP_421921.1| flagellar motor component [Magnetospirillum magneticum AMB-1]
gi|82946498|dbj|BAE51362.1| Flagellar motor component [Magnetospirillum magneticum AMB-1]
Length = 272
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/222 (17%), Positives = 93/222 (41%), Gaps = 16/222 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST+IG +++L I+G + N I + +++V G L + ++ ++ + +
Sbjct: 10 LSTVIGFTLSLLLIVGSIIELTTNFKIFLHLSGLLMVIGGTLAAAHVGFEMRYVRQALGN 69
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF + + + + + Y L+K E+ + + F +
Sbjct: 70 IKAIFFSPKMARGMLTNEVARVIRWGYLLQKSGIQALESDVKSLKSQDAFLA-------- 121
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
Y ++V E+ +++D +++ + +M + PA G++
Sbjct: 122 --------YGVGLVVSGYTGPEVRHMLDNQVETAFQRHTVSVEILKYMASNAPAFGMMAT 173
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNP 222
++G++ + N+ P LG + V L GTL G++ + + P
Sbjct: 174 LVGLVVMLDNMGDDPSKLGGGMAVGLLGTLYGVLFARLVLMP 215
>gi|39935078|ref|NP_947354.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris CGA009]
gi|192290611|ref|YP_001991216.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris TIE-1]
gi|39648929|emb|CAE27450.1| possible chemotaxis protein motA [Rhodopseudomonas palustris
CGA009]
gi|192284360|gb|ACF00741.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris TIE-1]
Length = 257
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 27/261 (10%)
Query: 12 LCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
+ +I MGG+ ++ I ++I+ G L ++ PL V+ G+ L F +
Sbjct: 13 IAVIAVMMLMGGDVHMFISEHAMIIIFGGSLTATMIRFPLNVML-HGLPLGAKFAFTMSR 71
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
V +L I K G + +DP F+ +R
Sbjct: 72 LSARDLVDELASIAEIARKSGPVGLEKVEAEDP--------------------FLAKGIR 111
Query: 132 MIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
+ G + +NL + + +++ E K Y AI G+ PA G++G ++G+++
Sbjct: 112 YVADGYDIEFIRDNLERDRDNFLMHLDEGSKIYRAI---GDCAPAFGMIGTLIGMVQMFS 168
Query: 190 NLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
N+S P LG + +L TL G +++ C P+ ++ + ++ + ++ ++
Sbjct: 169 NMSD-PSKLGPFMATALLATLYGALVANLFCLPIADKLHTKKIDEETNRTLIIDGILMIR 227
Query: 250 NGAIPQVAIEYGRKVLPLSER 270
+ P + E LP R
Sbjct: 228 DSKSPALVREMLLAYLPEKHR 248
>gi|269962341|ref|ZP_06176691.1| flagellar motor protein [Vibrio harveyi 1DA3]
gi|269832837|gb|EEZ86946.1| flagellar motor protein [Vibrio harveyi 1DA3]
Length = 253
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +LS L P+ ++
Sbjct: 147 GDVAPAMGMIGTLVGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAVLSNMLFFPIADKLS 205
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
R ++ ++ ++A +G P+V Y + L +R ++EI
Sbjct: 206 LRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEGKR-ALEI 251
>gi|116329295|ref|YP_799015.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330098|ref|YP_799816.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122039|gb|ABJ80082.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123787|gb|ABJ75058.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 260
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 112/269 (41%), Gaps = 22/269 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++G + +I G + G +P L I+I G G +MA P + G
Sbjct: 5 TVVGFGAACVLMIFGIISAGLSPLDLFDVPSILITFGGATAGTIMAVPWESTLAVGKVTQ 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
++F + D+++L+ L+ + + +R E ++D N +P +
Sbjct: 65 KVF------KTEKHDLIELIKTLV-SFSEKARREGLLALEDDVNE-----LPDEFLRKGI 112
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
T ++V + N+M+ E+ I + G PA G++G ++
Sbjct: 113 T---------LVVDGTDPELVRNIMETEMGNIASRHNNGKAWWENWGALAPAFGMIGTLI 163
Query: 183 GIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
G+++ + NL S P +GT + +L TL G + + P+ ++ + + I+
Sbjct: 164 GLVQMLKNLGSGDPSAIGTGMAAALITTLYGSMGANMFAIPVMKKLMRKSEDELTIKQIM 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++ +G P++ + LP SER
Sbjct: 224 IEGTLSIQSGDNPRIVKDKLSSFLPPSER 252
>gi|224436414|ref|ZP_03657434.1| flagellar motor protein MotA [Helicobacter cinaedi CCUG 18818]
gi|313142932|ref|ZP_07805125.1| flagellar motor protein MotA [Helicobacter cinaedi CCUG 18818]
gi|313127963|gb|EFR45580.1| flagellar motor protein MotA [Helicobacter cinaedi CCUG 18818]
Length = 256
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM----GESLPAIGIVGA 180
F+ + MII G E++ E+ I E+ YH +H E+ P +G+VGA
Sbjct: 107 FLRQALSMIIDGRDAHAVREDM---EVQIESLEEY--YHGSAHYWVTYAETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L PK + I + T T+ GI +Y+L P ++ + R ++
Sbjct: 162 VMGLMLAL-QLLDDPKAMAAGIAGAFTATVTGIFCAYALFGPWGHKMIAKSKDIIRERMV 220
Query: 241 VKKALIAYMNGAIPQ 255
V + ++ NG P+
Sbjct: 221 VLEGVVGIANGDNPR 235
>gi|91976555|ref|YP_569214.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91683011|gb|ABE39313.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 257
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 28/272 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL ++ ++ MGGN + ++I+ G ++ PL + G+
Sbjct: 3 IATLIGLVAGVI-VVSTLILMGGNFGMFYDIHAVIIIFGGSFAATLIRFPLSAML-HGLP 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + V +L I K G + D+P
Sbjct: 61 LGAKFAFTMSSLSARDLVDELARIAEIARKSGPVGLEKVETDEP---------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGESLPAIGIV 178
F+ +R + G + +NL + + +L+ E K Y AI G+ PA G++
Sbjct: 105 ----FLAKGIRYVADGYDLEFIRDNLERDRDNFLLHLNEGSKIYRAI---GDCAPAFGMI 157
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G +LG+++ N+S P LG + V+L TL G +++ +C P+ ++ + +
Sbjct: 158 GTLLGMVQMFSNMSD-PSKLGPFMAVALLATLYGAVVANLICLPIADKLHGKLVDEETNR 216
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 217 TLIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|91225059|ref|ZP_01260281.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|254228603|ref|ZP_04922027.1| chemotaxis protein PomA [Vibrio sp. Ex25]
gi|262395024|ref|YP_003286878.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
gi|269965068|ref|ZP_06179233.1| flagellar motor protein [Vibrio alginolyticus 40B]
gi|3024412|sp|O06873|POMA_VIBAL RecName: Full=Chemotaxis protein PomA
gi|2130948|dbj|BAA20284.1| PomA [Vibrio alginolyticus]
gi|91190002|gb|EAS76273.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|151938782|gb|EDN57616.1| chemotaxis protein PomA [Vibrio sp. Ex25]
gi|262338618|gb|ACY52413.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
gi|269830371|gb|EEZ84596.1| flagellar motor protein [Vibrio alginolyticus 40B]
Length = 253
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++
Sbjct: 147 GDVAPAMGMIGTLVGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAILSNMVFFPIADKLS 205
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEY-------GRKVLPLSE 269
R ++ ++ ++A +G P+V Y G++ L + E
Sbjct: 206 LRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEGKRALEIDE 253
>gi|227876750|ref|ZP_03994859.1| flagellar motor protein A [Mobiluncus mulieris ATCC 35243]
gi|269976277|ref|ZP_06183273.1| MotA/TolQ/ExbB proton channel [Mobiluncus mulieris 28-1]
gi|306817697|ref|ZP_07451439.1| chemotaxis MotA protein [Mobiluncus mulieris ATCC 35239]
gi|307699809|ref|ZP_07636860.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Mobiluncus mulieris FB024-16]
gi|227842647|gb|EEJ52847.1| flagellar motor protein A [Mobiluncus mulieris ATCC 35243]
gi|269935606|gb|EEZ92144.1| MotA/TolQ/ExbB proton channel [Mobiluncus mulieris 28-1]
gi|304649511|gb|EFM46794.1| chemotaxis MotA protein [Mobiluncus mulieris ATCC 35239]
gi|307614847|gb|EFN94065.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Mobiluncus mulieris FB024-16]
Length = 259
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E+ ++ ++I+ Y G P IGI+G ++ ++ + NLS +P+ LG
Sbjct: 123 ELREMLGDKIEAKKESDKGAYEWFKQAGGYSPTIGIIGTVVSLVHVLTNLS-NPETLGPM 181
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKS-TRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
I + TL G++ + + P++ +++ ++L+ R+ II + LI+ +GA P+ E
Sbjct: 182 IASAFVATLWGLLSANMIWLPMSGRLQRISQLEIARMEIIT-EGLISLQSGANPRQVGER 240
Query: 261 GRKVLPLSE 269
R ++P S+
Sbjct: 241 LRSLIPPSQ 249
>gi|302342670|ref|YP_003807199.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301639283|gb|ADK84605.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 261
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TI+G+F + I G ++ GG + P ++IV G L ++ PL + + +
Sbjct: 4 ATILGIFSGLALISGAIFSQGGVDLFINLP-SMMIVMGGTLAATLITFPLPEVVHAFRAA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++F + + + +V++LL L SR + ++ V N+
Sbjct: 63 SQVFRQRKINPN---EVVRLLL----TLANISRRQG------------LVALSKVKTNDA 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ M+I A I + EID + + MG P+ G++G +
Sbjct: 104 ----VLKKALMLIADGAPEELIRQTLRIEIDALRARHMDAQDVFKKMGSYAPSFGMLGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
+G+++ +G L P +G A+ V+L T G +LS P+ ++++
Sbjct: 160 IGLVQMLGQLD-DPATIGPAMAVALITTFYGSLLSSLFFLPIAGKLRN 206
>gi|188588133|ref|YP_001922643.1| chemotaxis protein MotA [Clostridium botulinum E3 str. Alaska E43]
gi|251780033|ref|ZP_04822953.1| putative chemotaxis protein MotA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188498414|gb|ACD51550.1| putative chemotaxis protein MotA [Clostridium botulinum E3 str.
Alaska E43]
gi|243084348|gb|EES50238.1| putative chemotaxis protein MotA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 258
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 112/269 (41%), Gaps = 42/269 (15%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++ L + +I F GG L Q +IV G G ++ P V+K
Sbjct: 3 MMIVLSLIFAFVALILAFLLEGGAITALFQLTAAIIVFGGTFGALGISFPGNVLK----- 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN--HIDDPYNST----IFTSIP 114
K ++ KK N EN D T + +
Sbjct: 58 -------------------KFPKVMSIAFKKRKNNMEENLLFFKDISTRTRKDGLLSLER 98
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-----SHMG 169
V +N++L FI +++ I G +S I+++++ ++ E++ H + S G
Sbjct: 99 EVSKNSDLDPFIKKGLQLAIDGVEQS-SIKSILETKL-----EQMSERHQVGIEMFSAAG 152
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
P +GI+G ++G+I+ + NL+ P +LG I + TL GI+ + P+ +++K
Sbjct: 153 GYAPTMGIIGTVMGLIQVVSNLN-DPTVLGPKIAAAFIATLYGILSANIFWLPIANKLKV 211
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
++++ ++ +A++ G P +
Sbjct: 212 LDMEEYNEKEMIIQAIVLIQQGTNPNTLV 240
>gi|303240001|ref|ZP_07326523.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
gi|302592480|gb|EFL62206.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
Length = 268
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
+ N F+ + +++++ G +E+ MD EI+ + K M PA G+
Sbjct: 99 QENIKDEFLKESLQLVVDGVEPEIIVES-MDLEIENMKARHDKGTGLFKTMAAQFPAWGM 157
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I+ + +L KI G A+ V+L T G +L+ +CNP+ +++ ++ R
Sbjct: 158 IGTLIGLIQLLKSLDDPSKI-GPAMAVALITTFYGSVLANFICNPIANKLSLKSKEEIRE 216
Query: 238 YIIVKKALIAYMNGAIPQV 256
+V + +++ G P++
Sbjct: 217 KRMVIEGVLSIQAGENPKI 235
>gi|193222294|emb|CAL61488.2| Motility protein A [Herminiimonas arsenicoxydans]
Length = 246
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ +R+I+ G +++ ++D EI ++ G P IGI+GA+LG+
Sbjct: 107 FVAHGLRLIVDG-VDPHKLREVLDMEIGAYETQQRLSIKIWEAAGGYAPTIGILGAVLGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
I M NLS P LG+ I V+ T+ G+ + + P++S++K+
Sbjct: 166 IHVMENLSD-PSRLGSGIAVAFVATIYGVGFANLVFLPISSKLKA 209
>gi|311992346|gb|ADQ26746.1| flagellar stator protein [Aeromonas hydrophila]
Length = 242
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 30/212 (14%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKDSGVSLLEIFGYKALGQDTYCD 77
GGN L+ VIV G G ++ P L+ I+ + LL D
Sbjct: 18 GGNLLTLLDGPAFVIVVGGTWGAVILQTPRKFLLEAIRQTRWMLLPP------AWDLVAQ 71
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+L ++ ++G EN D E++E T + MI+ G
Sbjct: 72 AERLQAWAVFARQQGLLA-LENQADQ--------------ESDEFTR---QGLTMIVDGV 113
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+ +I L++ +IDI MG P IGI+GA++G+I+AM +L + P
Sbjct: 114 SID-DIRMLLEADIDIEQERNEHSARVFEAMGGYSPTIGIIGAVIGLIQAMFHL-EEPAS 171
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
LG I V+ T+ G+ + L P+ +++++
Sbjct: 172 LGAGIAVAFVATIYGVGFANLLYLPIANRLRA 203
>gi|84394352|ref|ZP_00993073.1| flagellar motor protein [Vibrio splendidus 12B01]
gi|84375011|gb|EAP91937.1| flagellar motor protein [Vibrio splendidus 12B01]
Length = 254
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
S G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G ILS + P+
Sbjct: 143 FSAFGDVAPAMGMIGTLVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAILSNMVFFPIA 201
Query: 225 SQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ R ++ +V ++A +G P+V Y + L +R
Sbjct: 202 DKLALRRDQETLNRRLVMDGVLAIQDGQNPRVIDGYLKSYLNEGKR 247
>gi|312622680|ref|YP_004024293.1| mota/tolq/exbb proton channel [Caldicellulosiruptor kronotskyensis
2002]
gi|312203147|gb|ADQ46474.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor kronotskyensis
2002]
Length = 265
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 24/258 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 5 SIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKTAVKHFK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F K + + V++ L L +K E I + N + + V++ E
Sbjct: 65 MVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNIQNPLLKKGLGLVVDGIEG 121
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
I +++D E+ + E + G P +GI+G ++
Sbjct: 122 EV------------------IRDILDREVYLAEDELKEAAEVFEAAGGYSPTMGIIGTVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR-LYIIV 241
G+I + NL+ +P LG AI V+ TL G+ + + +IK T+ KQ R L I+
Sbjct: 164 GLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIK-TKAKQERMLNEII 221
Query: 242 KKALIAYMNGAIPQVAIE 259
+ L++ G P++ E
Sbjct: 222 VEGLLSIQAGENPRILRE 239
>gi|117619934|ref|YP_855926.1| chemotaxis protein MotA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117561341|gb|ABK38289.1| chemotaxis protein MotA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 243
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 30/212 (14%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANP----LKVIKDSGVSLLEIFGYKALGQDTYCD 77
GGN L+ VIV G G ++ P L+ I+ + LL D
Sbjct: 19 GGNLLTLLDGPAFVIVVGGTWGAVILQTPRKFLLEAIRQTRWMLLPP------AWDLVAQ 72
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+L ++ ++G EN D E++E T + MI+ G
Sbjct: 73 AERLQAWAVFARQQGLLA-LENQADQ--------------ESDEFTR---QGLTMIVDGV 114
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+ +I L++ +IDI MG P IGI+GA++G+I+AM +L + P
Sbjct: 115 SID-DIRMLLEADIDIEQERNEHSARVFEAMGGYSPTIGIIGAVIGLIQAMFHL-EEPAS 172
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
LG I V+ T+ G+ + L P+ +++++
Sbjct: 173 LGAGIAVAFVATIYGVGFANLLYLPIANRLRA 204
>gi|312884944|ref|ZP_07744634.1| flagellar motor protein PomA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367421|gb|EFP94983.1| flagellar motor protein PomA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 254
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++
Sbjct: 147 GDVSPAMGMIGTLVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAILSNMIFFPIADKL- 204
Query: 229 STRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
S R +Q +L ++ ++A +G P+V Y + L +R
Sbjct: 205 SLRREQEKLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|187778758|ref|ZP_02995231.1| hypothetical protein CLOSPO_02353 [Clostridium sporogenes ATCC
15579]
gi|187772383|gb|EDU36185.1| hypothetical protein CLOSPO_02353 [Clostridium sporogenes ATCC
15579]
Length = 270
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 22/270 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + +I G G N + + I G L ++ P+ K V ++
Sbjct: 8 TPIGLVLCFGLVIWGMSTGGSNLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVVIV 67
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F + + DV++ +L + +R E ++D N N
Sbjct: 68 QTFKDNGM---SNIDVIQNFV----DLSRKARREGLLSLEDAIN-------------NLT 107
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +RM++ G I +M+ EID + + G PA G++G ++
Sbjct: 108 DDYMKKGLRMVVDG-IEPETIREIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLI 166
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ S I + +G +L T G +++ + NP+ + + + +V
Sbjct: 167 GLIQMLANLTDSSTI-ASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREMVL 225
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ ++A +G P++ E L +ER +
Sbjct: 226 EGVLAIQSGVNPRIMEEKLVSYLSPTERQA 255
>gi|311031290|ref|ZP_07709380.1| flagellar motor protein MotP [Bacillus sp. m3-13]
Length = 271
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 121 ELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
EL D+++ ++ V I ++M+ EI + +K + G+ P+ G+
Sbjct: 104 ELEDVEDDFIKKGVLLAVDGVEPEVIHDIMNAEISAMEERHMKGRSILEKAGDYAPSWGM 163
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G++ + NL+ P LG + +++ TL G +L+ + P+ S++ + K+ L
Sbjct: 164 IGTLIGLVLMLKNLN-DPTTLGPNMAIAILTTLYGTLLANLVFLPMASKLANKTEKEVFL 222
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
I+ + +I +G P++ E L +R + E L+ N
Sbjct: 223 KQIIIEGVIGVQSGQNPKILEEKLSAFLSNQDRERKDEAVAETLEEN 269
>gi|254473242|ref|ZP_05086640.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
gi|211957963|gb|EEA93165.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
Length = 256
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 31/240 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ + ++ + +GG+ + I+IV G GL ++ PL
Sbjct: 3 LATIIGVIAACVTVLIAIF-LGGSFSQFVDLPSILIVVGGGLAATLVRFPLN-------G 54
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN--HIDDPYNSTIFTSIPTVLE 118
LL FG A KL + + K R EN H+ + T P LE
Sbjct: 55 LLSAFGMGA----------KLAFT---HKKIEPRELVENIAHLAE----TARKEGPLGLE 97
Query: 119 NNELTTFICDYMRMIIVGNARSYE-IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
N E+ M V + Y I + M++E D+ L + +G+S PA G+
Sbjct: 98 NVEIEEPTL-AKGMQYVADGYDYNLIRDSMEKERDLYLTRLNEGARVYRALGDSAPAFGM 156
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+++ + + P +G ++ ++L TL G +++ +C P+ ++ S + +Q L
Sbjct: 157 IGTLVGLVQMLATM-DDPSTIGPSMAIALLTTLYGSLIANVVCIPVADKLDS-KFEQEEL 214
>gi|329895772|ref|ZP_08271148.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC3088]
gi|328922134|gb|EGG29491.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC3088]
Length = 251
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 159 LKPYHAI-----SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGI 213
+K HA+ S GE PA+G+VG + G++ +GN+S PK +G A+ ++L T+ G
Sbjct: 130 MKQRHAMGAGVFSAWGEIAPAMGMVGTLAGLVIMLGNMSD-PKAIGPAMAIALLTTMYGA 188
Query: 214 ILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
IL+ +C P+ ++ + + ++ + ++ +G P+V
Sbjct: 189 ILANVICLPMAQKLANASALEAANNELILEGVLFMQSGGNPRV 231
>gi|144899935|emb|CAM76799.1| MotA/TolQ/ExbB proton channel [Magnetospirillum gryphiswaldense
MSR-1]
Length = 266
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E+ ++ I+ P + +M + PA G++G ++G+I +G + P LG
Sbjct: 128 EVRQILTNSIETSFQRNCVPADILRNMAGTAPAYGMIGTLIGLIIMLGQMGSDPAALGPG 187
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKST-RLKQHRLYIIVK 242
+ V+L TL G++L + P S+I+ + + R Y++ +
Sbjct: 188 MAVALITTLYGVLLPRLMLLPAASKIQQREEIVRFRNYLVAE 229
>gi|306820124|ref|ZP_07453772.1| chemotaxis protein MotA [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551902|gb|EFM39845.1| chemotaxis protein MotA [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 258
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 43/275 (15%)
Query: 10 TILCIIGGFYAMG-----GNP----YILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
T++ ++G F AMG G YI I F I ++ GA + A P+ IKD
Sbjct: 5 TVIGLVGAFAAMGLGIISGGAGFATYIDIPSFFITVL-GAIFASMI-AFPMSTIKD---- 58
Query: 61 LLEIFG--YKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTV 116
L ++ G +K+ D + L+ + K G S E + DP+
Sbjct: 59 LPKLIGKTFKSEATDPSKTIESLIELANKARKDGLLSLEEAARDMGDPF----------- 107
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL-PAI 175
M+IV + NL++ E+D I ++ K + M S+ P
Sbjct: 108 ----------LQKGLMLIVDGTDPELVRNLLETELDFI-EQRHKNGQGLMEMIASMGPGF 156
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G + G++ + NLS + LG + V+L TL G IL+ P+ ++ +
Sbjct: 157 GMIGTLFGLVAMLKNLSDTAS-LGPNMAVALITTLYGSILANVFFTPMAKKLSVNSAVEM 215
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + L++ G P++ E + LP S R
Sbjct: 216 LERGIILEGLLSIQAGENPRIIEEKLKAFLPPSLR 250
>gi|312127874|ref|YP_003992748.1| mota/tolq/exbb proton channel [Caldicellulosiruptor hydrothermalis
108]
gi|311777893|gb|ADQ07379.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor hydrothermalis
108]
Length = 265
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 24/258 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 5 SIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKTAVKHFK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F K + + V++ L L +K E I + N + + V++ E
Sbjct: 65 LVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNIQNPLLKKGLGLVVDGIE- 120
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
I +++D E+ + E + G P +GI+G ++
Sbjct: 121 -----------------GEVIRDILDREVYLAEDELKEAAEVFEAAGGYAPTMGIIGTVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR-LYIIV 241
G+I + NL+ +P LG AI V+ TL G+ + + +IK T+ KQ R L I+
Sbjct: 164 GLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIK-TKAKQERMLNEII 221
Query: 242 KKALIAYMNGAIPQVAIE 259
+ L++ G P++ E
Sbjct: 222 VEGLLSIQAGENPRILRE 239
>gi|238924160|ref|YP_002937676.1| motility protein A [Eubacterium rectale ATCC 33656]
gi|238875835|gb|ACR75542.1| motility protein A [Eubacterium rectale ATCC 33656]
Length = 263
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 150 EIDIILYEKL--KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLT 207
E D++ E+ K GE PA G++G ++G+I + NL S I G + V+L
Sbjct: 131 ETDMLSMEERHKKTISFWEFWGEQGPAWGMIGTLIGLINMLKNLEDSSTI-GPNMAVALV 189
Query: 208 GTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPL 267
T G +++ LC P +++K+ + L ++ + L++ G P+V E + L
Sbjct: 190 TTFYGSLIANWLCAPFANKLKANNELELTLKTLIIEGLLSIQAGENPRVIEEKLKSFLSP 249
Query: 268 SERPSI 273
+R ++
Sbjct: 250 DKREAL 255
>gi|46202086|ref|ZP_00053785.2| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 265
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/222 (18%), Positives = 90/222 (40%), Gaps = 16/222 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IG +++L IIG + N I + +++V G L + + +K + +
Sbjct: 3 LPTVIGFTLSLLLIIGSILELTTNFKIFLHLSGLLMVIGGTLAAANVGFEARYVKQALGN 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF + + + + + Y L+K E+ + F +
Sbjct: 63 IKAIFFSPKMARGMLTNEVARVIRWGYLLQKSGIQALESDVKSLKGQDAFLA-------- 114
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
Y ++V E+ +++D +++ + +M + PA G++
Sbjct: 115 --------YGVGLVVSGYTGEEVRHMLDNQVETAFQRHTVSVEILKYMASNAPAFGMMAT 166
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNP 222
++G++ + N+ P LG + V L GTL G++ + + P
Sbjct: 167 LVGLVVMLDNMGDDPSKLGAGMAVGLLGTLYGVLFARLILMP 208
>gi|330839449|ref|YP_004414029.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
gi|329747213|gb|AEC00570.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
Length = 258
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFV-MANPLKVIKDSGVS 60
ST+IGL ++ I GG G L P +I+ LG F + ++ + +
Sbjct: 4 STLIGLLSGLIAIFGGMILKGAPISSLNNPAAFMIII---LGTFACLFTAFRMDEMKMLP 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++A ++L+L L ++ E+ ++D + T + V++
Sbjct: 61 KLIKMTFQAPPSHQKGELLQLFIELSQIARREGILALESRVEDISDPFFKTGLSMVIDGM 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM-----GESLPAI 175
+ F+ D ++D EI + ++ H++ + G P +
Sbjct: 121 D-PDFVSD-----------------VLDAEISV-----MQERHSLGRLMLMQAGTYAPTL 157
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRL 232
G++GA++G+I A+ NLS ++G AI + T+LGI +Y L P +++K + +
Sbjct: 158 GVLGAVIGLIAALSNLSDV-NVVGHAIAAAFVATILGIYTAYVLWLPWANKLKIMSDSEI 216
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIEYGRKV-LPLSERPSIEIVAQE 279
Q R+ + + +++ G P AIE V +P SER E++ +E
Sbjct: 217 GQKRMIV---EGILSLQAGDSP-TAIEAKLMVFIPQSER---EVLKKE 257
>gi|307265591|ref|ZP_07547145.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter wiegelii Rt8.B1]
gi|326389647|ref|ZP_08211213.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus JW
200]
gi|306919389|gb|EFN49609.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter wiegelii Rt8.B1]
gi|325994362|gb|EGD52788.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus JW
200]
Length = 273
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ + + +I GF GG LI +IV G +G + + + IK
Sbjct: 5 IATIVGIVLGVGSLIYGFTLEGGTVASLIGVSAAIIVFGGTIGATITSYSMDEIKKVPGL 64
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ F + +D Y +++K L + +R+E ++ S +L+ +
Sbjct: 65 LVRAFKNE---KDNYLEIIKYFTYLA----QKARSEGLLSLESEIESEEIKKFDPILKES 117
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +++ G+ I M+ +I I E K G P +GI+G
Sbjct: 118 ---------LELVVDGSDMEL-IRTTMENKIYIEDMEAKKEAGIFESAGGYAPTMGIIGT 167
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS-TRLKQHRLYI 239
++G++ + NLS+ P LG +I V+ TL G+ + L P+ ++K+ +K+ +
Sbjct: 168 VMGLVHVLSNLSE-PDKLGPSIAVAFIATLYGVSSANLLWLPIAQKLKNRAHIKRTEREL 226
Query: 240 IVKKAL 245
I++ +L
Sbjct: 227 ILEGSL 232
>gi|94969960|ref|YP_592008.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
gi|94552010|gb|ABF41934.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
Length = 255
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T G+ ++ I+ G GG ++QP +IV G LG ++ P + + +
Sbjct: 6 TFGGVLAAVVGIVAGLLIEGGKISQILQPTAALIVFGGTLGAVMVQFPFHQFLAAARATI 65
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
IF + + ++L L Y +K ++ +D +S + ++
Sbjct: 66 TIF---RVSSNQREEMLDELVRFAYKARKQGIVSLDSDLDTINDSFLKRAL--------- 113
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
M+ V E+ +M+ E+D + + G P IGI+GA+L
Sbjct: 114 ---------MLAVDGTAPGELRKMMELELDQEAEKDERTPQVFEAAGGYSPTIGIIGAVL 164
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI-IV 241
G+I+ M +L Q+ +G I V+ T+ G+ + P +++ R+++ +L +
Sbjct: 165 GLIQVMQHL-QNIDEVGRGIAVAFVATIYGVAAANIFFLPAAGKLR-IRVREAQLQREMA 222
Query: 242 KKALIAYMNGAIPQV 256
+ +IA + G P++
Sbjct: 223 VEGVIALLEGMNPRM 237
>gi|316934821|ref|YP_004109803.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris DX-1]
gi|315602535|gb|ADU45070.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris DX-1]
Length = 257
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Query: 112 SIPTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHM 168
S P LE E F+ +R + G + +NL + + +L+ E K Y AI
Sbjct: 91 SGPVGLEKVEADDPFLAKGIRYVADGYDIEFIRDNLERDRDNFLLHLNEGSKIYRAI--- 147
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA G++G +LG+++ N+S P LG + V+L TL G +++ +C P+ ++
Sbjct: 148 GDCAPAFGMIGTLLGMVQMFSNMSD-PSKLGPFMAVALLATLYGAVVANLICLPIADKLH 206
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++ ++ + P + E LP R
Sbjct: 207 GKLVDEETNRTLIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|325928223|ref|ZP_08189429.1| flagellar motor component [Xanthomonas perforans 91-118]
gi|325541412|gb|EGD12948.1| flagellar motor component [Xanthomonas perforans 91-118]
Length = 246
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
++ M NL+ P +LG I + T T+ GI + L P+ +++KS
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSV 210
>gi|156973486|ref|YP_001444393.1| flagellar motor protein PomA [Vibrio harveyi ATCC BAA-1116]
gi|156525080|gb|ABU70166.1| hypothetical protein VIBHAR_01176 [Vibrio harveyi ATCC BAA-1116]
Length = 253
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++
Sbjct: 147 GDVTPAMGMIGTLVGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAVLSNMVFFPIADKLS 205
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEY-------GRKVLPLSE 269
R ++ ++ ++A +G P+V Y G++ L + E
Sbjct: 206 LRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEGKRALEIDE 253
>gi|229189824|ref|ZP_04316835.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 10876]
gi|228593632|gb|EEK51440.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 10876]
Length = 277
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++ID +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLLKDIDTEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|188991573|ref|YP_001903583.1| flagellar motor protein [Xanthomonas campestris pv. campestris str.
B100]
gi|167733333|emb|CAP51532.1| Flagellar motor component MotA [Xanthomonas campestris pv.
campestris]
Length = 246
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
++ M NL+ P +LG I + T T+ GI + L P+ +++KS
Sbjct: 165 LMAVMKNLA-DPSMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSV 210
>gi|188584557|ref|YP_001928002.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
gi|179348055|gb|ACB83467.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
Length = 257
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEID---IILYEKLKPYHAISHMG 169
P LE+ E++ F+ R I G R + I + M+ + D + L E K Y A G
Sbjct: 94 PIALESMEISDPFLAQGARYIADGYDRDF-IRDTMERDRDNFLMHLDEGSKIYRAF---G 149
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+ PA G++G ILG++ N+S P LG A+ +L TL G +++ + P+ ++
Sbjct: 150 DCAPAWGMIGTILGMVTMFANMSD-PSKLGPAMATALLATLYGALIANMVTLPIADKL 206
>gi|153835782|ref|ZP_01988449.1| chemotaxis protein PomA [Vibrio harveyi HY01]
gi|148867500|gb|EDL66862.1| chemotaxis protein PomA [Vibrio harveyi HY01]
Length = 253
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++
Sbjct: 147 GDVAPAMGMIGTLVGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAVLSNMVFFPIADKLS 205
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEY-------GRKVLPLSE 269
R ++ ++ ++A +G P+V Y G++ L + E
Sbjct: 206 LRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEGKRALEIDE 253
>gi|78047518|ref|YP_363693.1| flagellar motor protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78035948|emb|CAJ23639.1| flagellar motor component MotA [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 246
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
++ M NL+ P +LG I + T T+ GI + L P+ +++KS
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSV 210
>gi|222529064|ref|YP_002572946.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor bescii DSM
6725]
gi|222455911|gb|ACM60173.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor bescii DSM
6725]
Length = 265
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 24/258 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 5 SIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKTAVKHFK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F K + + V++ L L +K E I + N + + V++ E
Sbjct: 65 MVFMDKKI---DFVSVVEQLVQLSDRARKEGLLALEQEIPNIQNPLLKKGLGLVVDGIE- 120
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
I +++D E+ + E + G P +GI+G ++
Sbjct: 121 -----------------GEVIRDILDREVYLAEDELKEAAEVFEAAGGYSPTMGIIGTVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR-LYIIV 241
G+I + NL+ +P LG AI V+ TL G+ + + +IK T+ KQ R L I+
Sbjct: 164 GLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIK-TKAKQERMLNEII 221
Query: 242 KKALIAYMNGAIPQVAIE 259
+ L++ G P++ E
Sbjct: 222 VEGLLSIQAGENPRILRE 239
>gi|21231339|ref|NP_637256.1| flagellar motor protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|21112998|gb|AAM41180.1| MotA protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
Length = 246
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
++ M NL+ P +LG I + T T+ GI + L P+ +++KS
Sbjct: 165 LMAVMKNLA-DPSMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSV 210
>gi|289662353|ref|ZP_06483934.1| flagellar motor protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 246
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
++ M NL+ P +LG I + T T+ GI + L P+ +++KS
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSV 210
>gi|66768609|ref|YP_243371.1| flagellar motor protein [Xanthomonas campestris pv. campestris str.
8004]
gi|66573941|gb|AAY49351.1| MotA protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 246
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
++ M NL+ P +LG I + T T+ GI + L P+ +++KS
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSV 210
>gi|325923842|ref|ZP_08185451.1| flagellar motor component [Xanthomonas gardneri ATCC 19865]
gi|325545676|gb|EGD16921.1| flagellar motor component [Xanthomonas gardneri ATCC 19865]
Length = 246
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
++ M NL+ P +LG I + T T+ GI + L P+ +++KS
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSV 210
>gi|325916149|ref|ZP_08178435.1| flagellar motor component [Xanthomonas vesicatoria ATCC 35937]
gi|325537640|gb|EGD09350.1| flagellar motor component [Xanthomonas vesicatoria ATCC 35937]
Length = 246
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+LG
Sbjct: 106 AFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
++ M NL+ P +LG I + T T+ GI + L P+ +++KS
Sbjct: 165 LMAVMKNLA-DPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSV 210
>gi|148976606|ref|ZP_01813293.1| flagellar motor protein PomA [Vibrionales bacterium SWAT-3]
gi|145963957|gb|EDK29215.1| flagellar motor protein PomA [Vibrionales bacterium SWAT-3]
Length = 254
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
S G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G ILS + P+
Sbjct: 144 SAFGDVSPAMGMIGTLVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAILSNMVFFPIAD 202
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ R ++ +V ++A +G P+V Y + L +R
Sbjct: 203 KLALRRDQETLNRRLVMDGVLAIQDGQNPRVIDGYLKSYLNEGKR 247
>gi|74055056|gb|AAZ95861.1| PomA [Aeromonas hydrophila]
Length = 245
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E F + MI+ G + +I L++ +IDI MG P IGI+
Sbjct: 98 DQESDEFTRQGLTMIVDGVSID-DIRMLLEADIDIEQERNEHSARVFEAMGGYSPTIGII 156
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
GA++G+I+AM +L + P LG I V+ T+ G+ + P+ +++++
Sbjct: 157 GAVMGLIQAMFHL-EDPAALGAGIAVAFVATIYGVGFANLFYLPIANRLRA 206
>gi|254787124|ref|YP_003074553.1| flagellar motor protein PomA [Teredinibacter turnerae T7901]
gi|237686787|gb|ACR14051.1| chemotaxis protein MotA [Teredinibacter turnerae T7901]
Length = 253
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G++ + N+ PK +G A+ V+L TL G +++ ++C P+ ++K ++ +
Sbjct: 156 IGTLIGLVAMLANMDD-PKAIGPAMAVALLTTLYGAVIANAMCGPMADKLKLRAGEEAMI 214
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+V AL+A G P+V R LP +R
Sbjct: 215 KSLVIDALLAIQGGQNPRVIDSMLRNYLPEGKR 247
>gi|224826336|ref|ZP_03699438.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224601437|gb|EEG07618.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 249
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++V + ++M+ EI + + + + G P +GI+GA+LG+I M NLS
Sbjct: 114 MLVDGTEPETLRSVMEVEISMFEHARRQSTRIWESAGGYAPTMGILGAVLGLIHVMENLS 173
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
P LG+ I V+ T+ G+ + L P+ +++K+ + + ++ + L+A +G
Sbjct: 174 -DPSKLGSGIAVAFVATIYGVGSANLLFLPIANKLKNLVAAEIAMRELIVEGLVAIGHGE 232
Query: 253 IPQV 256
P++
Sbjct: 233 NPRI 236
>gi|261212058|ref|ZP_05926344.1| Flagellar motor rotation protein MotA [Vibrio sp. RC341]
gi|262402759|ref|ZP_06079320.1| Flagellar motor rotation protein MotA [Vibrio sp. RC586]
gi|260838666|gb|EEX65317.1| Flagellar motor rotation protein MotA [Vibrio sp. RC341]
gi|262351541|gb|EEZ00674.1| Flagellar motor rotation protein MotA [Vibrio sp. RC586]
Length = 254
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSL 219
K G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +LS +
Sbjct: 138 KGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMD-DPKSIGPAMAVALLTTLYGAVLSNMI 196
Query: 220 CNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
P+ ++ R ++ ++ ++A +G P+V Y + L +R
Sbjct: 197 FFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNAGKR 247
>gi|260886727|ref|ZP_05897990.1| chemotaxis protein MotA [Selenomonas sputigena ATCC 35185]
gi|260863579|gb|EEX78079.1| chemotaxis protein MotA [Selenomonas sputigena ATCC 35185]
Length = 283
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFV-MANPLKVIKDSGVS 60
ST+IGL ++ I GG G L P +I+ LG F + ++ + +
Sbjct: 29 STLIGLLSGLIAIFGGMILKGAPISSLNNPAAFMIII---LGTFACLFTAFRMDEMKMLP 85
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++A ++L+L L ++ E+ ++D + T + V++
Sbjct: 86 KLIKMTFQAPPSHQKGELLQLFIELSQIARREGILALESRVEDISDPFFKTGLSMVIDGM 145
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM-----GESLPAI 175
+ F+ D ++D EI + ++ H++ + G P +
Sbjct: 146 D-PDFVSD-----------------VLDAEISV-----MQERHSLGRLMLMQAGTYAPTL 182
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRL 232
G++GA++G+I A+ NLS ++G AI + T+LGI +Y L P +++K + +
Sbjct: 183 GVLGAVIGLIAALSNLSDV-NVVGHAIAAAFVATILGIYTAYVLWLPWANKLKIMSDSEI 241
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIEYGRKV-LPLSERPSIEIVAQE 279
Q R+ + + +++ G P AIE V +P SER E++ +E
Sbjct: 242 GQKRMIV---EGILSLQAGDSP-TAIEAKLMVFIPQSER---EVLKKE 282
>gi|332141876|ref|YP_004427614.1| flagellar motor protein PomA [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551898|gb|AEA98616.1| flagellar motor protein PomA [Alteromonas macleodii str. 'Deep
ecotype']
Length = 253
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G + +C P+ ++
Sbjct: 146 MGDIAPAMGMIGTLIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAFFANVICLPIAFKL 204
Query: 228 KSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
S R + +L +V ++ +G P+V + L S+R S E
Sbjct: 205 -SVRAGEEKLNQSLVLDGIVGIADGQNPRVIEGVLKNYLAASKRGSAE 251
>gi|27378911|ref|NP_770440.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
gi|27352061|dbj|BAC49065.1| pomA [Bradyrhizobium japonicum USDA 110]
Length = 257
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 1 MSTIIGLFITI-LCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
M + G+ +T + +I MGG+ ++ I ++I+ G + ++ PL + G+
Sbjct: 1 MDIMTGVGLTAGIIVIAAMIFMGGDLHMFISEHAMIIIFGGSISATMIRFPLSALL-HGL 59
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L F + + V +L I K+G + D+P+ + I V +
Sbjct: 60 PLGAKFAFTMSRLSAHDLVDELARIAEIARKQGPVGLEKVETDEPF---LAKGIRYVADG 116
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGESLPAIGI 177
+L D++R +NL + + +++ E K Y AI G+ PA G+
Sbjct: 117 YDL-----DFIR------------DNLERDRDNFLMHLDEGSKIYRAI---GDCAPAFGM 156
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+++ N++ P LG + +L TL G +++ C P+ ++ L +
Sbjct: 157 IGTLIGMVQMFANMTD-PSKLGPFMATALLATLYGALVANLFCLPIADKLHGKLLDEETN 215
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 216 RTLIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|149191101|ref|ZP_01869360.1| flagellar motor protein PomA [Vibrio shilonii AK1]
gi|148835029|gb|EDL52007.1| flagellar motor protein PomA [Vibrio shilonii AK1]
Length = 216
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
+ N M ++I + +K G+ PA+G++G ++G++ + N+ PK +G A+
Sbjct: 121 VRNAMQKDIALTDERHVKGAGVFKAFGDVSPAMGMIGTLIGLVAMLSNMDD-PKSIGPAM 179
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
V+L TL G ILS L P+ ++ R +++ + +
Sbjct: 180 AVALLTTLYGAILSNMLFFPIADKLTLRREQENSIVV 216
>gi|254785496|ref|YP_003072925.1| flagellar motor protein [Teredinibacter turnerae T7901]
gi|237683897|gb|ACR11161.1| transporter, MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
Length = 246
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 150 EIDIILYEKLKPYHAIS---HMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
E D+I+ E+ + A+ MG P IGI+GA++G+I M +LS +P LG I ++
Sbjct: 129 ETDLIVAEQ-RDSEAVQFYESMGGYAPTIGIIGAVMGLIHVMQHLS-NPAELGPGIAIAF 186
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
T+ G+ + L P+ +++K+ +Q + ++ + +I+ +G P+ AIE
Sbjct: 187 VATIYGVAFANLLLLPIANKLKACIRQQSQYRELLIEGIISIADGENPR-AIE 238
>gi|319787079|ref|YP_004146554.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
gi|317465591|gb|ADV27323.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
Length = 246
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ ++M++ G +I ++M+ +++ ++L MG P +GIVGA+ G+
Sbjct: 107 FLKKGLQMLVDG-VEPEQIRHMMEIDLESQESQELAAAKVFEGMGVYAPTLGIVGAVFGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST--RLKQHRLYIIVK 242
I M NL+ P LG I + T T+ GI + P+ +++K+ R R II
Sbjct: 166 IAVMKNLA-DPSKLGHGIAAAFTATIYGIASANLFFLPIANKLKAVIGRRTGEREMII-- 222
Query: 243 KALIAYMNGAIPQ 255
+ LIA G P+
Sbjct: 223 EGLIAIAQGENPR 235
>gi|312877227|ref|ZP_07737196.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor lactoaceticus
6A]
gi|311796036|gb|EFR12396.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor lactoaceticus
6A]
Length = 265
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 5 SIGGLILGFGSLLIAFILEKGNPAKLLQISAALIVFGGTIAAVLVSFPMSQIKTAVKHFK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F K + + V++ L L +K E I + N + + V++ E
Sbjct: 65 MVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNIQNPLMKKGLGLVVDGIEG 121
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
I +++D E+ + E + G P +GI+G ++
Sbjct: 122 EV------------------IRDILDREVYLAEDELKEAAEVFEAAGGYAPTMGIIGTVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR-LYIIV 241
G+I + NL+ +P LG AI V+ TL G+ + + +IK T+ KQ R L I+
Sbjct: 164 GLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIK-TKAKQERMLNEII 221
Query: 242 KKALIAYMNGAIPQV 256
+ L++ G P++
Sbjct: 222 VEGLLSIQAGENPRI 236
>gi|315127297|ref|YP_004069300.1| chemotaxis motA protein [Pseudoalteromonas sp. SM9913]
gi|315015811|gb|ADT69149.1| chemotaxis motA protein [Pseudoalteromonas sp. SM9913]
Length = 254
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG P IGI+GA+LG+I+AM + P+ LGT I + T+ G+ L+ L P+ +++
Sbjct: 149 MGGYSPTIGILGAVLGLIQAM-SFINDPEQLGTGIATAFIATIYGVGLANLLFLPMANKL 207
Query: 228 KSTRLKQHRLYI-IVKKALIAYMNGAIP 254
K R++Q LY ++ + +IA G P
Sbjct: 208 KQ-RVEQKMLYHEMLAEGVIAISQGESP 234
>gi|197122875|ref|YP_002134826.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|196172724|gb|ACG73697.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
Length = 261
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 36/263 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI G+F + I+ G GG+ L+Q +IV G LG ++A P + + +
Sbjct: 3 VTTIAGIFAAVGLILLGQALEGGHVGSLLQATAALIVFGGTLGAVLVAFPRRDVGRALSQ 62
Query: 61 LLEIFGYK-----ALGQD--TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
L +F + AL ++ Y V + +L K I DP
Sbjct: 63 LKLVFAERKVDLGALSRELVEYAGVARRDGVLALEAKL-------PGIPDP--------- 106
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
F+ +++++ G S + ++ +D E G P
Sbjct: 107 -----------FLRRALQLVVDGVDASVS-RSTLEAAVDAEYEEHAVGAKVWEAAGGFAP 154
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
IGI+GA+LG+I M NLS P LG I V+ T+ G+ + L P +++K
Sbjct: 155 TIGILGAVLGLIHVMENLSD-PSKLGGGIAVAFVATVYGVGSANVLFLPFATKMKRKLGA 213
Query: 234 QHRLYIIVKKALIAYMNGAIPQV 256
+ ++ + ++A G P+V
Sbjct: 214 ERDRKTLITEGVLAIQEGINPRV 236
>gi|121533752|ref|ZP_01665579.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
gi|121307743|gb|EAX48658.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
Length = 260
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+E+N F+ M+++I G + ++M+ E+ I K G P +G
Sbjct: 103 IEDN----FLQKGMQLVIDGTDAEL-VRSIMETELTFIQERHHKAASIFETAGGYAPTMG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+G ++G++ +GNL+ + LG AI + TL G+ + P+ +++K+ +Q
Sbjct: 158 IIGTVMGLVHVLGNLTDTES-LGPAIATAFIATLYGVASANIFFLPIGAKLKNRSSRQVL 216
Query: 237 LYIIVKKALIAYMNGAIPQVAIE 259
+ + + +++ G P++ E
Sbjct: 217 FHEVTLEGILSVQAGDNPRIVAE 239
>gi|302872093|ref|YP_003840729.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor obsidiansis
OB47]
gi|302574952|gb|ADL42743.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor obsidiansis
OB47]
Length = 265
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 24/255 (9%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I GL + ++ F GNP L+Q +IV G + +++ P+ IK + +
Sbjct: 5 SIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKIAVKHIK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F K + + V++ L L +K E I + N + + V++ E
Sbjct: 65 MVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNLQNPLLKKGLGLVVDGIEG 121
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
I +++D E+ + E + G P +GI+G ++
Sbjct: 122 EV------------------IRDILDREVYLAEDELKEAAEVFEAAGGYSPTMGIIGTVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR-LYIIV 241
G+I + NL+ +P LG AI V+ TL G+ + + +IK T+ KQ R L I+
Sbjct: 164 GLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIK-TKAKQERMLNEII 221
Query: 242 KKALIAYMNGAIPQV 256
+ L++ G P++
Sbjct: 222 VEGLLSIQAGENPRI 236
>gi|149178719|ref|ZP_01857302.1| chemotaxis pomA protein [Planctomyces maris DSM 8797]
gi|148842417|gb|EDL56797.1| chemotaxis pomA protein [Planctomyces maris DSM 8797]
Length = 259
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
+E ++ E++ + + +G PA G++G ++G+I +GN+ P+ +G +
Sbjct: 125 MEQILRTEMEAVAGRHKNGKSLMDTVGRYAPAFGMIGTLMGLIIMLGNMD-DPEAIGPGM 183
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+L TL G ++S P ++ ++ ++ ++ K LIA G P+V +
Sbjct: 184 AVALITTLYGALVSNLFFLPFADKLAFYSKQEFQVREVIIKGLIAIQEGDNPRVIEQKLN 243
Query: 263 KVLPLSER 270
LP +R
Sbjct: 244 TFLPQDQR 251
>gi|260767265|ref|ZP_05876206.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|260617773|gb|EEX42951.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|315180896|gb|ADT87810.1| flagellar motor protein PomA [Vibrio furnissii NCTC 11218]
Length = 254
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++
Sbjct: 147 GDVAPAMGMIGTLVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAVLSNMVFFPIADKLS 205
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEY-------GRKVLPLS 268
R ++ ++ ++A +G P+V Y G++VL +
Sbjct: 206 LRREQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNEGKRVLDVD 252
>gi|283782102|ref|YP_003372857.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283440555|gb|ADB18997.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 259
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 121/278 (43%), Gaps = 30/278 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYI-LIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
++TI+GL I ++G MGG + +++V G LG ++ P+KVI +
Sbjct: 3 IATILGLIIA-FAMMGASVIMGGGSFASFWDTASVLMVFGGSLGTVMVCFPMKVI----L 57
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN---ETENHIDDPYNSTIFTSIPTV 116
L ++ AL + DV L+ ++ + R+ E I + + I I
Sbjct: 58 KLPKVMIKSALNKPP--DVSALISQIVSLAETARRDGLLALEARIGEIQHPLIKLGI--- 112
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ V +R IE +M E++ + + + +G PA+G
Sbjct: 113 ---------------QMSVDGSRPEAIEEVMRTEVESLSLRHKEGKGMLDQIGRFAPAMG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++G +LG+I +GN+S P +G + V+L TL G ++S P+ ++ ++
Sbjct: 158 MIGTLLGLIIMLGNMSD-PSAIGGGMAVALITTLYGAVISNGSILPMAEKLAYVTKQEII 216
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
I+ + ++A +G P++ + LP + R + E
Sbjct: 217 ASEIIIRGIMALQSGENPRLIEQKLNTFLPPAVRKAKE 254
>gi|149375612|ref|ZP_01893381.1| Flagellar motor component [Marinobacter algicola DG893]
gi|149360014|gb|EDM48469.1| Flagellar motor component [Marinobacter algicola DG893]
Length = 257
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+GES PAIG++G ++G+++ + L P +G A+ ++L TL G ++ + PL ++
Sbjct: 147 IGESAPAIGMLGTLVGLVQMLNTLD-DPSSIGPAMAIALLTTLYGAFIAQLIALPLADKL 205
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
+ + R +++ ++ M G P+V E
Sbjct: 206 QLKAEDEARNQVLITTSMRTIMRGENPRVMTE 237
>gi|90579838|ref|ZP_01235646.1| flagellar motor protein [Vibrio angustum S14]
gi|90438723|gb|EAS63906.1| flagellar motor protein [Vibrio angustum S14]
Length = 253
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
S G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +L+ + P+
Sbjct: 144 SSFGDVAPAMGMIGTLIGLVAMLSNMD-DPKAIGPAMAVALLTTLYGSMLANMVAIPIAD 202
Query: 226 QIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ + R +Q RL ++ ++A +G P+V Y + L +R I
Sbjct: 203 KL-TLRKEQERLNKRLILDGVLAIQDGQNPRVIDGYLKNYLHEKKRSVI 250
>gi|163785020|ref|ZP_02179754.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
gi|159879713|gb|EDP73483.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
Length = 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 35/206 (16%)
Query: 1 MSTIIGLF-ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
++T+IG+ T+L +I A+GG+P + ++IV G GL + + PLK + +
Sbjct: 3 IATVIGIVGATLLLVIS--IALGGSPLAFVNIPSLLIVVGGGLAASLASYPLKEMINGLK 60
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN---ETENHIDDPYNSTIFTSIPTV 116
++L+ F + D ++ + L+ + K +N E+ ID+ Y
Sbjct: 61 AVLKAF------KPGLPDPVEHIDFLVDVVNKARKNGILALESDIDNFY----------- 103
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDE---EIDIILYEKLKPYHAISHMGESLP 173
E F D MRM+I G EI++ D +ID L ++ + A +GE P
Sbjct: 104 ----EKDPFFGDLMRMLIDGQDIE-EIKSNADTALMKIDQDLSTEVAIWEA---LGELFP 155
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILG 199
A G++G ++G+I+ + NL+ P LG
Sbjct: 156 AFGMIGTLIGLIQMLQNLND-PSALG 180
>gi|149909330|ref|ZP_01897986.1| flagellar motor protein [Moritella sp. PE36]
gi|149807647|gb|EDM67595.1| flagellar motor protein [Moritella sp. PE36]
Length = 254
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNP 222
H S +GE PA+G++G ++G++ + N+ PK +G A+ V+L TL G + + + P
Sbjct: 141 HVFSMIGEVAPAMGMIGTLIGLVAMLSNMD-DPKSIGPAMAVALLTTLYGAVFANMIAIP 199
Query: 223 LTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+ ++K ++ ++ A++ G P+V
Sbjct: 200 IAGKLKLRSEEEMLNNTLIMDAILGIQEGRNPRV 233
>gi|207109198|ref|ZP_03243360.1| flagellar motor protein MotA [Helicobacter pylori HPKX_438_CA4C1]
Length = 219
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 149 EEIDIILYEKLKPYHAISH----MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E ++I + E + YH +H GE+ P +G+VGA++G++ A+ L +P + I
Sbjct: 121 ESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL-DNPAEMAAGIAG 179
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKS 229
+ T T+ GI+ +Y++ P ++K+
Sbjct: 180 AFTATVTGIMCAYAIFGPFGHKLKA 204
>gi|89073142|ref|ZP_01159681.1| flagellar motor protein [Photobacterium sp. SKA34]
gi|89051095|gb|EAR56552.1| flagellar motor protein [Photobacterium sp. SKA34]
Length = 253
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
S G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +L+ + P+
Sbjct: 144 SSFGDVAPAMGMIGTLIGLVAMLSNMD-DPKAIGPAMAVALLTTLYGSMLANMVAIPIAD 202
Query: 226 QIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ + R +Q RL ++ ++A +G P+V Y + L +R I
Sbjct: 203 KL-TLRKEQERLNKRLILDGVLAIQDGQNPRVIDGYLKNYLHEKKRSVI 250
>gi|302392385|ref|YP_003828205.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
gi|302204462|gb|ADL13140.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
Length = 271
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 120/251 (47%), Gaps = 37/251 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ GL + L I G +GG+P I I ++V G L ++ K I+D +
Sbjct: 5 LATMGGLIVGALLIAGAIV-LGGSPIIFISGTSFLMVVGGTLAAATVSYSFKHIQDL-IG 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L++ Y+ Q +++ +L + + +R E ++D N L+++
Sbjct: 63 ILKVAFYEQ--QTNPQEIISVLV----SFAEKARREGLLALEDEANQ---------LDDD 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH-----MGESLPAI 175
F+ +++++ G S + ++++ E+ L+ HA S MGE PA
Sbjct: 108 ----FLQKGIQLVVDGT-DSELVRSILETELAF-----LEERHATSRGIFETMGELSPAF 157
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+I+ + L ++P+ +G + +L T G +++ + PL K R+K
Sbjct: 158 GMMGTLVGLIQMLSKL-ENPENVGGGLATALITTFYGTVMANLVFIPLA---KKLRMKSE 213
Query: 236 RLYIIVKKALI 246
I+VK+ +I
Sbjct: 214 E-EILVKEVMI 223
>gi|90423603|ref|YP_531973.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90105617|gb|ABD87654.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 257
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Query: 112 SIPTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHM 168
S P LE E F+ +R + G + +N+ + + +L+ E K Y AI
Sbjct: 91 SGPVGLEKVETDEPFLAKGIRYVADGYDLEFIRDNMERDRDNFLLHLNEGSKIYRAI--- 147
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA G++G +LG+++ N+S P LG + V+L TL G +++ +C P+ ++
Sbjct: 148 GDCAPAFGMIGTLLGMVQMFSNMSD-PSKLGPFMAVALLATLYGALVANLICLPIADKLH 206
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++ ++ + P + E LP R
Sbjct: 207 GKLIDEETNRTLIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|319647378|ref|ZP_08001600.1| YtxD protein [Bacillus sp. BT1B_CT2]
gi|317390725|gb|EFV71530.1| YtxD protein [Bacillus sp. BT1B_CT2]
Length = 272
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 30/229 (13%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+G+FI +L ++ G G +I + F ++ G F+ +P K +K + L +
Sbjct: 13 ILGIFILVLGVVSGAGLSGFYSFIDLTSF-FIVTGGLCAAVFISFSP-KDLKRAPAVLKQ 70
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + +D +++K L +K S + N + DP
Sbjct: 71 VFISE---EDDVRELVKTFVSLSEQARKQGILSLDANVNEMKDP---------------- 111
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + + I G I N+M+ EI + K GE PA G++G
Sbjct: 112 ----FLKKGLLLAIDGWDEET-IRNVMNSEIAAMEERHRKGRRIFEKAGEFAPAWGMIGT 166
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
++G++ + NL++ P+ LG + ++L TL G +L+ L P+ ++++
Sbjct: 167 LVGLVMMLKNLNK-PETLGPNMAIALLTTLYGSLLANMLFIPIAAKLEE 214
>gi|86147427|ref|ZP_01065739.1| flagellar motor protein [Vibrio sp. MED222]
gi|218710366|ref|YP_002417987.1| flagellar motor protein PomA [Vibrio splendidus LGP32]
gi|85834720|gb|EAQ52866.1| flagellar motor protein [Vibrio sp. MED222]
gi|218323385|emb|CAV19562.1| flagellar motor protein [Vibrio splendidus LGP32]
Length = 254
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
+ G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G ILS + P+
Sbjct: 144 TAFGDVAPAMGMIGTLVGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAILSNMVFFPIAD 202
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ R ++ +V ++A +G P+V Y + L +R
Sbjct: 203 KLALRRDQETLNRRLVMDGVLAIQDGQNPRVIDGYLKSYLNEGKR 247
>gi|52081473|ref|YP_080264.1| flagellar motor protein MotP [Bacillus licheniformis ATCC 14580]
gi|52786849|ref|YP_092678.1| flagellar motor protein MotP [Bacillus licheniformis ATCC 14580]
gi|52004684|gb|AAU24626.1| flagellar motor apparatus protein [Bacillus licheniformis ATCC
14580]
gi|52349351|gb|AAU41985.1| YtxD [Bacillus licheniformis ATCC 14580]
Length = 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 30/229 (13%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+G+FI +L ++ G G +I + F ++ G F+ +P K +K + L +
Sbjct: 13 ILGIFILVLGVVSGAGLSGFYSFIDLTSF-FIVTGGLCAAVFISFSP-KDLKRAPAVLKQ 70
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + +D +++K L +K S + N + DP
Sbjct: 71 VFISE---EDDVRELVKTFVSLSEQARKQGILSLDANVNEMKDP---------------- 111
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + + I G I N+M+ EI + K GE PA G++G
Sbjct: 112 ----FLKKGLLLAIDGWDEET-IRNVMNSEIAAMEERHRKGRRIFEKAGEFAPAWGMIGT 166
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
++G++ + NL++ P+ LG + ++L TL G +L+ L P+ ++++
Sbjct: 167 LVGLVMMLKNLNK-PETLGPNMAIALLTTLYGSLLANMLFIPIAAKLEE 214
>gi|117925242|ref|YP_865859.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
gi|117608998|gb|ABK44453.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
Length = 250
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
V A +E+++ ++++ + K +GE+ PA G++G ++G+++ + +
Sbjct: 113 VDGADPEFLESVLRKDLEYLASRHGKGVAIWEGIGETAPAFGMIGTLIGLVQMLATMD-D 171
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
P +G A+ V+L TL G I + + PL ++ ++ + I+ +I G P
Sbjct: 172 PSSIGPAMAVALLTTLYGSIFANVIAIPLAVKLTMYSQEEQVVREIIIDGMIGIQKGVNP 231
Query: 255 QVAIEYGRKVLPLSERPS 272
++ E + LP S+R +
Sbjct: 232 RMLQEALKAALPPSQRDA 249
>gi|284989546|ref|YP_003408100.1| MotA/TolQ/ExbB proton channel [Geodermatophilus obscurus DSM 43160]
gi|284062791|gb|ADB73729.1| MotA/TolQ/ExbB proton channel [Geodermatophilus obscurus DSM 43160]
Length = 256
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E+ +++ EI E ++ MG P IGIVG I+G++ MGNLS +P+ LG
Sbjct: 124 ELRAVLESEISAKKAEDKVAAKFMNAMGGYAPTIGIVGCIVGLMNVMGNLS-NPEALGPM 182
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQI-KSTRLKQHRLYIIVK 242
I + TL G++ + P+ ++I + + L+ ++ ++V+
Sbjct: 183 IAAAFVATLWGVMAANFWFLPMGAKILRVSELQAAQMELLVE 224
>gi|298346000|ref|YP_003718687.1| flagellar motor protein A [Mobiluncus curtisii ATCC 43063]
gi|304390242|ref|ZP_07372196.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315657507|ref|ZP_07910389.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298236061|gb|ADI67193.1| flagellar motor protein A [Mobiluncus curtisii ATCC 43063]
gi|304326724|gb|EFL93968.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315491979|gb|EFU81588.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 259
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 129 YMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+MR M + ++ +++ ++I+ Y G P IGI+G ++ ++
Sbjct: 107 FMREGLMAAIDGMDPEDLRSMLSDKIEARKQSDKSAYGFFKQAGGYAPTIGIIGTVISLV 166
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ LS+ P+ LG I + TL G++ + + PL+S+++ + IV + L
Sbjct: 167 HVLTQLSE-PETLGPLIASAFVATLWGLMSANMIWLPLSSRMERISTLELARMEIVTEGL 225
Query: 246 IAYMNGAIPQVAIEYGRKVLP 266
I+ +GA P+ E R ++P
Sbjct: 226 ISLQSGANPRQVGERLRSLIP 246
>gi|308048594|ref|YP_003912160.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307630784|gb|ADN75086.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 254
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ 226
+GE PA+G++G ++G++ + N+ PK +G A+ V+L TL G +++ + P+ +
Sbjct: 145 KLGEVAPAMGMIGTLIGLVAMLNNMD-DPKTIGPAMAVALLTTLYGAVIANMVALPIADK 203
Query: 227 IKSTRLKQHRL-YIIVKKALIAYMNGAIPQV 256
++ R+++ L ++ A++A +G P+V
Sbjct: 204 LE-LRMQEEMLNRRLIMDAVLAIQDGQNPRV 233
>gi|91201945|emb|CAJ75005.1| strongly similar to H+-driven flagellar motor component MotA
[Candidatus Kuenenia stuttgartiensis]
Length = 262
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ +R+++ G + S + +++ EID I + G PA G++G +LG+
Sbjct: 109 FLVKSVRLLVDG-SDSDALRDILGTEIDKIRQRHTSGKGILDFAGMVAPAYGMIGTLLGL 167
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+ + NL KI G + V+L TL G+ILS + PL ++++ K+ I+ +
Sbjct: 168 VNMLKNLDDPSKI-GGGMAVALITTLYGVILSNLIFIPLGGRLETLSSKELLSKEIILEG 226
Query: 245 LIAYMNGAIPQV 256
+++ G P +
Sbjct: 227 VVSIQKGDAPMI 238
>gi|115524023|ref|YP_780934.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115517970|gb|ABJ05954.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 257
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGE 170
P LE E F+ +R + G + +N+ + + +L+ E K Y AI G+
Sbjct: 93 PVGLEKVETDEPFLAKGIRYVADGYDLEFIRDNMERDRDNFLLHLNEGSKIYRAI---GD 149
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
PA G++G +LG+++ N+S P LG + V+L TL G +++ +C P+ ++
Sbjct: 150 CAPAFGMIGTLLGMVQMFSNMSD-PSKLGPFMAVALLATLYGALVANLICLPIADKLHGK 208
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++ ++ + P + E LP R
Sbjct: 209 LIDEETNRTLIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|167038134|ref|YP_001665712.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167039155|ref|YP_001662140.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X514]
gi|166853395|gb|ABY91804.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X514]
gi|166856968|gb|ABY95376.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter pseudethanolicus
ATCC 33223]
Length = 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+ M+ +I + E K G P +G++G ++G+++A+GNL++ P LG A+
Sbjct: 128 IKTTMENKIYVEDMEAKKEAGIFESAGGYAPTMGLIGTVMGLVQALGNLTE-PDKLGPAV 186
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKS-TRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
V+ TL G IL+ P+ ++K+ ++K +I++ +L + G P++
Sbjct: 187 AVAFITTLYGAILANVFFLPIAQKLKNRAKVKTTERELILEGSL-SLQAGENPRIL---- 241
Query: 262 RKVLPLSERPSIEIVAQEVLQYNHNK 287
ER + VAQ L+ K
Sbjct: 242 -------ERKLMTFVAQAQLKNTPQK 260
>gi|330830901|ref|YP_004393853.1| chemotaxis protein PomA [Aeromonas veronii B565]
gi|328806037|gb|AEB51236.1| Chemotaxis protein PomA [Aeromonas veronii B565]
Length = 252
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ F+ + M++ G+ + +M+++ID+ + +G+ PA+
Sbjct: 95 LEAAEIPNAFMKKGIDMLVDGHDAEV-VRAVMEKDIDLTAERHVIAIKVFRTLGDLGPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+S PK +G A+ V+L TL G I + L P+ +++ ++
Sbjct: 154 GMIGTLVGLVAMLANMS-DPKSIGPAMAVALLTTLYGAIEANMLAIPIADKLELRSGEEK 212
Query: 236 RLYIIVKKALIAYMNGAIPQV 256
++ A++ +G P+V
Sbjct: 213 LSRTLILDAIMGIQDGQNPRV 233
>gi|83642950|ref|YP_431385.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83630993|gb|ABC26960.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 250
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+GES PA+G++G ++G+++ + N+ Q P +G A+ ++L T G ++ + PL ++
Sbjct: 135 LGESAPALGMLGTLVGLVQMLNNM-QDPSSIGPAMAIALLTTFYGAFIAQLIVLPLADKL 193
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+ + R +IV +++ + G P++
Sbjct: 194 QLKTQDEVRNRMIVISGILSMVKGLNPRI 222
>gi|315654588|ref|ZP_07907494.1| chemotaxis MotA protein [Mobiluncus curtisii ATCC 51333]
gi|315491052|gb|EFU80671.1| chemotaxis MotA protein [Mobiluncus curtisii ATCC 51333]
Length = 259
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 129 YMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+MR M + ++ +++ ++I+ Y G P IGI+G ++ ++
Sbjct: 107 FMREGLMAAIDGMDPEDLRSMLSDKIEARKQSDKSAYGFFKQAGGYAPTIGIIGTVISLV 166
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ LS+ P+ LG I + TL G++ + + PL+S+++ + IV + L
Sbjct: 167 HVLTQLSE-PETLGPLIASAFVATLWGLMSANMIWLPLSSRMERISTLELARMEIVTEGL 225
Query: 246 IAYMNGAIPQVAIEYGRKVLP 266
I+ +GA P+ E R ++P
Sbjct: 226 ISLQSGANPRQVGERLRSLIP 246
>gi|255021390|ref|ZP_05293438.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
gi|254969253|gb|EET26767.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
Length = 247
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ ++M++ G ++I + ++ +++ + + G P IGI+GA+LG+
Sbjct: 107 FLQKGLQMLVDGT-EPHKIRDTLEVDLEARDSMERQAAKVFESAGGYAPTIGILGAVLGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I M NL+ P LG I + T+ G+ + P++++IK +Q L ++ +
Sbjct: 166 IHVMENLA-DPAKLGAGIATAFVATIYGVGSANLFFLPVSNKIKGIVHQQSHLREMIIEG 224
Query: 245 LIAYMNGAIPQV 256
L+A G P++
Sbjct: 225 LVAIAEGENPKI 236
>gi|256750879|ref|ZP_05491763.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913255|ref|ZP_07130572.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X561]
gi|307723731|ref|YP_003903482.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X513]
gi|320116544|ref|YP_004186703.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|256750214|gb|EEU63234.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889940|gb|EFK85085.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X561]
gi|307580792|gb|ADN54191.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X513]
gi|319929635|gb|ADV80320.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 274
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+ M+ +I + E K G P +G++G ++G+++A+GNL++ P LG A+
Sbjct: 130 IKTTMENKIYVEDMEAKKEAGIFESAGGYAPTMGLIGTVMGLVQALGNLTE-PDKLGPAV 188
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKS-TRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
V+ TL G IL+ P+ ++K+ ++K +I++ +L + G P++
Sbjct: 189 AVAFITTLYGAILANVFFLPIAQKLKNRAKVKTTERELILEGSL-SLQAGENPRIL---- 243
Query: 262 RKVLPLSERPSIEIVAQEVLQYNHNK 287
ER + VAQ L+ K
Sbjct: 244 -------ERKLMTFVAQAQLKNTPQK 262
>gi|240145495|ref|ZP_04744096.1| chemotaxis protein PomA [Roseburia intestinalis L1-82]
gi|257202310|gb|EEV00595.1| chemotaxis protein PomA [Roseburia intestinalis L1-82]
Length = 267
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSY 217
K+ + + +G PA G++G ++G+I + N+ + I G A+ +L TL G +L+
Sbjct: 147 KIAVWEKWAELG---PAWGMIGTLIGLILMLKNMEDASTI-GPAMATALVTTLYGSLLAN 202
Query: 218 SLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
LCNP+ ++K + + I + +++ G P+V E + L PS A
Sbjct: 203 WLCNPIAGKLKLNNDNEMMMKEISVEGILSIQAGENPRVIEEKLKSFLA----PSARNTA 258
Query: 278 QE 279
QE
Sbjct: 259 QE 260
>gi|148380610|ref|YP_001255151.1| chemotaxis MotA protein [Clostridium botulinum A str. ATCC 3502]
gi|153933911|ref|YP_001384896.1| chemotaxis MotA protein [Clostridium botulinum A str. ATCC 19397]
gi|153934553|ref|YP_001388365.1| chemotaxis MotA protein [Clostridium botulinum A str. Hall]
gi|148290094|emb|CAL84213.1| putative chemotaxis MotA protein [Clostridium botulinum A str. ATCC
3502]
gi|152929955|gb|ABS35455.1| chemotaxis protein MotA [Clostridium botulinum A str. ATCC 19397]
gi|152930467|gb|ABS35966.1| chemotaxis protein MotA [Clostridium botulinum A str. Hall]
Length = 270
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + II G G + + + I G L ++ P+ K V ++
Sbjct: 8 TPIGLVLCFGLIIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVVIV 67
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F + + DV++ +L + +R E ++D N N
Sbjct: 68 QTFKDNGM---SNIDVIQNFV----DLSRKARREGLLSLEDAIN-------------NLT 107
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +RM++ G I ++M+ EID + + G PA G++G ++
Sbjct: 108 DDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLI 166
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ S I + +G +L T G +++ + NP+ + + + +V
Sbjct: 167 GLIQMLANLTDSSTI-ASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREMVL 225
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P++ E L +ER
Sbjct: 226 EGVLAIQSGVNPRIMEEKLVSYLSPTER 253
>gi|291538505|emb|CBL11616.1| Flagellar motor component [Roseburia intestinalis XB6B4]
Length = 256
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSY 217
K+ + + +G PA G++G ++G+I + N+ + I G A+ +L TL G +L+
Sbjct: 136 KIAVWEKWAELG---PAWGMIGTLIGLILMLKNMEDASTI-GPAMATALVTTLYGSLLAN 191
Query: 218 SLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
LCNP+ ++K + + I + +++ G P+V E + L PS A
Sbjct: 192 WLCNPIAGKLKLNNDNEMMMKEISVEGILSIQAGENPRVIEEKLKSFLA----PSARNTA 247
Query: 278 QE 279
QE
Sbjct: 248 QE 249
>gi|152997426|ref|YP_001342261.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150838350|gb|ABR72326.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 245
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEK-LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
++M I G + L D+ + I Y+K +K I +G P +GI+G++LG+I+AM
Sbjct: 112 LQMAIDGTDPDLLADRLHDDAVRI--YDKRMKSVSFIESIGGYAPTLGIMGSVLGLIQAM 169
Query: 189 GNLSQSPKILGTAIGVSLTGTLLG 212
NL SP+ LG I V+ TL G
Sbjct: 170 ANL-DSPEALGHGIAVAFVSTLYG 192
>gi|88859187|ref|ZP_01133828.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
gi|88819413|gb|EAR29227.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
Length = 253
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G L+ + P+ +++
Sbjct: 146 LGDVAPAMGMIGTLIGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAFLANVVAIPIVAKL 204
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++ ++ A++ +G P+V + LP S+R
Sbjct: 205 QLRKEEEELNQNLILDAVLGIQDGQNPKVIEGILKNYLPESKR 247
>gi|332992376|gb|AEF02431.1| flagellar motor protein PomA [Alteromonas sp. SN2]
Length = 254
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G L+ +C P+ ++
Sbjct: 146 MGDIAPAMGMIGTLIGLVAMLSNMD-DPKSIGPAMAVALLTTLYGAFLANIICLPMAVKL 204
Query: 228 KSTRLKQHRL-YIIVKKALIAYMNGAIPQV 256
R ++ +L ++V ++ +G P+V
Sbjct: 205 -GNRAQEEKLNQMLVLDGIVGIADGQNPRV 233
>gi|237750613|ref|ZP_04581093.1| flagellar motor rotation protein [Helicobacter bilis ATCC 43879]
gi|229373703|gb|EEO24094.1| flagellar motor rotation protein [Helicobacter bilis ATCC 43879]
Length = 256
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 18/139 (12%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY-HAISH----MGESLPAIGIVG 179
F + M MII G E++ EI I E+L+ Y H+ +H GE+ P +G+VG
Sbjct: 107 FTREAMSMIIDGREAKDVREDM---EIQI---EQLEHYYHSAAHYWIQFGETCPTMGLVG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A+ G+I A+ L +P + IG + T T+ GI+ +Y++ P ++K+ K H + I
Sbjct: 161 AVCGLILAL-TLLDNPAAMAAGIGGAFTATVTGIMGAYAIFGPFGQKMKA---KSHDIII 216
Query: 240 ---IVKKALIAYMNGAIPQ 255
++ +A++ NG P+
Sbjct: 217 EKVMILEAVVGIANGDNPR 235
>gi|127513696|ref|YP_001094893.1| flagellar motor protein PomA [Shewanella loihica PV-4]
gi|126638991|gb|ABO24634.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
Length = 255
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 79/145 (54%), Gaps = 11/145 (7%)
Query: 117 LENNELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS---HMGESL 172
LE E++ +F+ + M++ G+ E L E DI L E+ + IS +G+
Sbjct: 95 LEEAEISNSFMQKAVDMLVDGHDGEVVREAL---EKDIALTEE-RHKTGISIFKALGDVA 150
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA+G++G ++G++ + N+ PK +G A+ V+L TL G I++ + P+ ++ S R+
Sbjct: 151 PAMGMIGTLIGLVAMLSNM-DDPKSIGPAMAVALLTTLYGAIIANMIALPIADKL-SLRM 208
Query: 233 KQHRL-YIIVKKALIAYMNGAIPQV 256
+ L ++ A++A +G P+V
Sbjct: 209 GEEMLNRNLIMDAVLAIQDGQNPRV 233
>gi|239996640|ref|ZP_04717164.1| flagellar motor protein PomA [Alteromonas macleodii ATCC 27126]
Length = 253
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G + +C P+ ++
Sbjct: 146 MGDVAPAMGMIGTLIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAFFANVVCLPIAFKL 204
Query: 228 KSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ R + +L +V ++ +G P+V + L S+R S E
Sbjct: 205 -AVRAGEEKLNQSLVLDGIVGIADGQNPRVIEGVLKNYLAASKRGSAE 251
>gi|170758802|ref|YP_001787973.1| chemotaxis MotA protein [Clostridium botulinum A3 str. Loch Maree]
gi|169405791|gb|ACA54202.1| chemotaxis protein MotA [Clostridium botulinum A3 str. Loch Maree]
Length = 270
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + II G G + + + I G L ++ P+ K V ++
Sbjct: 8 TPIGLVLCFGLIIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLLVVIV 67
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F + + DV++ +L + +R E ++D N N
Sbjct: 68 QTFKDNGM---SNIDVIQNFV----DLSRKARREGLLSLEDAIN-------------NLT 107
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +RM++ G I ++M+ EID + + G PA G++G ++
Sbjct: 108 DDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLI 166
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ S I + +G +L T G +++ + NP+ + + + +V
Sbjct: 167 GLIQMLANLTDSSTI-ASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREMVL 225
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P++ E L +ER
Sbjct: 226 EGVLAIQSGVNPRIMEEKLVSYLSPTER 253
>gi|254522690|ref|ZP_05134745.1| flagellar motor protein [Stenotrophomonas sp. SKA14]
gi|219720281|gb|EED38806.1| flagellar motor protein [Stenotrophomonas sp. SKA14]
Length = 246
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG P +GI+GA+LG+I M NL+ P LG I + T T+ GI + L P+ +++
Sbjct: 149 MGIYAPTLGIIGAVLGLIAVMKNLA-DPSKLGHGIAAAFTATIYGIASANLLFLPIAAKL 207
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
KS R +V + LI+ G P+
Sbjct: 208 KSVISHNTRDREMVIEGLISIAQGENPR 235
>gi|77918776|ref|YP_356591.1| proton conductor component of motor [Pelobacter carbinolicus DSM
2380]
gi|77544859|gb|ABA88421.1| proton conductor component of motor; no effect on switching
[Pelobacter carbinolicus DSM 2380]
Length = 257
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 115/260 (44%), Gaps = 33/260 (12%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
STI G+ L +I + GG + I P +IV G +G ++ K + + V++
Sbjct: 4 STIAGIAAAFLLMILAISS-GGGITLFIDPPSAMIVIGGTIGTTLVHYTFKDMMGT-VAI 61
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYN---LKKG--SRNETENHIDDPYNSTIFTSIPTV 116
++ KA + ++ I+ Y K+G S +DDP
Sbjct: 62 IK----KAFFAQRFSSTDRIAQIIDYAGKARKEGILSLQSVTKEVDDP------------ 105
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
F ++M + G +++ ++D EI+ + + + MG PA+G
Sbjct: 106 --------FFLKGLQMAVDGQ-EPDKLKEMLDSEIEYLEERHDRGSEIMVAMGTYAPAMG 156
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++G ++G+++ + ++ P +G A+ V+L T G +++ +C P++ ++K+ +
Sbjct: 157 MIGTLIGLVQMLQTMND-PSSIGPAMAVALLTTFYGAVIANIICMPMSGKLKNRSSDEVL 215
Query: 237 LYIIVKKALIAYMNGAIPQV 256
++ + + + + G P+V
Sbjct: 216 DKTLIAEGMRSILEGENPRV 235
>gi|190574216|ref|YP_001972061.1| flagellar motor protein [Stenotrophomonas maltophilia K279a]
gi|190012138|emb|CAQ45761.1| putative flagellar motor proton channel [Stenotrophomonas
maltophilia K279a]
Length = 246
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG P +GI+GA+LG+I M NL+ P LG I + T T+ GI + L P+ +++
Sbjct: 149 MGIYAPTLGIIGAVLGLIAVMKNLA-DPSKLGHGIAAAFTATIYGIASANLLFLPIAAKL 207
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
KS R +V + LI+ G P+
Sbjct: 208 KSVISHNTRDREMVIEGLISIAQGENPR 235
>gi|91776301|ref|YP_546057.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710288|gb|ABE50216.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
Length = 246
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 36/258 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVM-ANPLKVIKDSGV 59
S++ G+ + + I+ G GG LIQP +IV +G ++ P+ I+ G+
Sbjct: 3 WSSLGGILLALAGILIGQALEGGKFSSLIQPAAFMIVLFGTIGAVLLQTRPVFFIQ--GI 60
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
LL+ + QD + + + +K ENH+
Sbjct: 61 RLLQWVVFPP--QDDREKLARRITSWSQIARKDGILLLENHM-----------------Y 101
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK-----LKPYHAISHMGESLPA 174
+E F+ +R++I G +I ++ + +DI YE +K + A G P
Sbjct: 102 SEQDPFVKTALRLVIDGTP-PEKIRDICN--VDINRYEAAQRNAVKIWEA---AGGYAPT 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS-TRLK 233
IGI+GA+LG+I M NLS P LG+ I ++ T+ G+ + L P+ +++K+ +L+
Sbjct: 156 IGILGAVLGLIHVMENLS-DPGKLGSGIAIAFVATIYGVGFANLLFLPIANKLKALVQLQ 214
Query: 234 QHRLYIIVKKALIAYMNG 251
R ++V + ++ NG
Sbjct: 215 TTRREMVV-EGVVGIANG 231
>gi|326203247|ref|ZP_08193112.1| MotA/TolQ/ExbB proton channel [Clostridium papyrosolvens DSM 2782]
gi|325986505|gb|EGD47336.1| MotA/TolQ/ExbB proton channel [Clostridium papyrosolvens DSM 2782]
Length = 266
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL--IQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
++TI+GL + + ++ G+ GG L + PF IV + G G ++A PL +K
Sbjct: 3 ITTIVGLVLGLGGVLAGYLEEGGQLGALFKVAPFLIVFI--GGFGATLVAFPLSEVKKML 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L +F K + D++ L L +K E N I + V++
Sbjct: 61 STLSMLFIQKKYNE---IDIINELADLSEKARKDGLLSLEQDAQTNKNDLIRKGLALVVD 117
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK-LKPYHAISHMGESLPAIGI 177
E T I D + AR E++ EEI YE K + A MG + PA+G+
Sbjct: 118 GIE-TEVIKDIL-------ARETELQ----EEI----YESGAKMFEA---MGGTWPAMGV 158
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
G ++G+I + +LS S LG I + T+ G+ + + P ++IK+ ++ +
Sbjct: 159 CGTVMGMISILKDLSDS-NALGPKISSAFIATMYGVAFANLVWLPFGTKIKAKAARETMI 217
Query: 238 YIIVKKALIAYMNGAIPQV 256
I+ + L++ G P++
Sbjct: 218 NEIIIEGLLSIQAGENPRI 236
>gi|119714996|ref|YP_921961.1| MotA/TolQ/ExbB proton channel [Nocardioides sp. JS614]
gi|119535657|gb|ABL80274.1| MotA/TolQ/ExbB proton channel [Nocardioides sp. JS614]
Length = 255
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + M I G E+ ++++ E+ E + + G P IGIVG ++G+
Sbjct: 107 FLARALTMAIDGT-DPEELRDILEAEVQAKKAETKQAARFWNSAGGYAPTIGIVGTVMGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ-IKSTRLKQHRLYIIVKK 243
+ + L++ P+ LG I + TL G++ + + PL S+ ++ L+ ++ +++ +
Sbjct: 166 VHVLEQLAE-PEKLGHLIAGAFVATLWGVMSANLIFLPLGSRLLRLGELEAAQMELVI-E 223
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A G+ P++ + R +LP+ +R
Sbjct: 224 GVAAVQAGSNPRIVAQRLRSLLPVGQR 250
>gi|297538887|ref|YP_003674656.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297258234|gb|ADI30079.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 246
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
S G P +GI+GA+LG+I M NLS P LG+ I V+ T+ G+ L+ + P+++
Sbjct: 147 SAAGGYAPTVGILGAVLGLIHVMENLS-DPSRLGSGIAVAFVATIYGVGLANLVFLPVSN 205
Query: 226 QIKSTRLKQHRLYI--IVKKALIAYMNGAIPQVAIE 259
++KS L QH + ++ A ++ +G P+V E
Sbjct: 206 KLKS--LIQHEMMRREMLLNAWVSIASGDHPRVVEE 239
>gi|228938841|ref|ZP_04101441.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228971722|ref|ZP_04132343.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978331|ref|ZP_04138708.1| Chemotaxis protein, MotA [Bacillus thuringiensis Bt407]
gi|228781348|gb|EEM29549.1| Chemotaxis protein, MotA [Bacillus thuringiensis Bt407]
gi|228787812|gb|EEM35770.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820690|gb|EEM66715.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 277
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL+ ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLSEKV 227
>gi|224368747|ref|YP_002602908.1| MotA1 [Desulfobacterium autotrophicum HRM2]
gi|223691463|gb|ACN14746.1| MotA1 [Desulfobacterium autotrophicum HRM2]
Length = 253
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/137 (20%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
N ++ ++M + G ++ +I +M +++ +I E Y S MG PA G+VG
Sbjct: 101 NTPDAYLAKALQMTVDG-VKTGDIAAIMQKKMALIKKEHKTGYSLYSSMGSFAPAFGMVG 159
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + NL P +G + V++ T G +++ P+ ++++ ++
Sbjct: 160 TLIGLVQMLANL-DDPSTIGPKMAVAMITTFYGSVMANLFFIPMATKLEGRSAEEITNMT 218
Query: 240 IVKKALIAYMNGAIPQV 256
I+ + +++ G P++
Sbjct: 219 IIYEGVVSIREGEHPRL 235
>gi|225181602|ref|ZP_03735043.1| MotA/TolQ/ExbB proton channel [Dethiobacter alkaliphilus AHT 1]
gi|225167710|gb|EEG76520.1| MotA/TolQ/ExbB proton channel [Dethiobacter alkaliphilus AHT 1]
Length = 275
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
Q D+ +L+ + + +L + +R E ++D N LE+ F+ + ++
Sbjct: 71 QQEVQDIGELISVFV-DLGQKARREGLLALEDDLND---------LED----PFLGNGLQ 116
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M+I G I ++MD EI + G PA G++G ++G+I+ + NL
Sbjct: 117 MVIDGLEPEL-IRDIMDTEITATVARHRMGQDLFKTWGALAPAFGMIGTLIGLIQMLANL 175
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
P +G + V+L T G +L+ L NPL ++ + V + ++A G
Sbjct: 176 D-DPSAIGPGMAVALLTTFYGALLANLLFNPLAGKLAIRSDAEIAQKEAVVEGVLAIQAG 234
Query: 252 AIPQVAIEYGRKVLPLSERPSI-------EIVAQEVLQYNH 285
P++ E + ++R + + +EV+ Y+H
Sbjct: 235 TNPRILQEKMKAFASPAQREEMARQSETPDTAGEEVI-YDH 274
>gi|168182735|ref|ZP_02617399.1| chemotaxis protein MotA [Clostridium botulinum Bf]
gi|237796092|ref|YP_002863644.1| chemotaxis MotA protein [Clostridium botulinum Ba4 str. 657]
gi|182674180|gb|EDT86141.1| chemotaxis protein MotA [Clostridium botulinum Bf]
gi|229261249|gb|ACQ52282.1| chemotaxis protein MotA [Clostridium botulinum Ba4 str. 657]
Length = 270
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + +I G G + + + I G L ++ P+ K V ++
Sbjct: 8 TPIGLVLCFGLVIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVVIV 67
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F + + DV++ +L + +R E ++D N N
Sbjct: 68 QTFKDNGM---SNIDVIQNFV----DLSRKARREGLLSLEDAIN-------------NLT 107
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +RM++ G I ++M+ EID + + G PA G++G ++
Sbjct: 108 DDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLI 166
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ S I + +G +L T G +++ + NP+ + + + +V
Sbjct: 167 GLIQMLANLTDSSTI-ASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREMVL 225
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P++ E L +ER
Sbjct: 226 EGVLAIQSGVNPRIMEEKLVSYLSPTER 253
>gi|332533103|ref|ZP_08408972.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037385|gb|EGI73839.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
Length = 254
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG P IGI+GA+LG+I+AM ++ P++LG + + T+ G+ L+ L P+ +++
Sbjct: 149 MGGYSPTIGILGAVLGLIQAMSFIT-DPQMLGAGVATAFIATIYGVGLANLLFLPMANKL 207
Query: 228 KSTRLKQHRLY 238
K R++Q LY
Sbjct: 208 KQ-RVEQKMLY 217
>gi|117620588|ref|YP_857807.1| chemotaxis protein PomA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117561995|gb|ABK38943.1| chemotaxis protein PomA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 252
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ TF+ + M++ G+ + +M+++I++ + +G+ PA+
Sbjct: 95 LEAAEIPNTFMKKGIDMLVDGHDADV-VRAVMEKDIELTSERHVIAVKVFRSLGDLGPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+S PK +G A+ V+L TL G I + + P+ +++ ++
Sbjct: 154 GMIGTLVGLVAMLANMS-DPKSIGPAMAVALLTTLYGAIEANMIAIPIADKLELRSGEEQ 212
Query: 236 RLYIIVKKALIAYMNGAIPQV 256
++ A++ +G P+V
Sbjct: 213 LSRTLILDAIMGIQDGQNPRV 233
>gi|322806982|emb|CBZ04552.1| flagellar motor rotation protein MotA [Clostridium botulinum H04402
065]
Length = 270
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + +I G G + + + I G L ++ P+ K V ++
Sbjct: 8 TPIGLVLCFGLVIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVVIV 67
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F + + DV++ +L + +R E ++D N N
Sbjct: 68 QTFKDNGM---SNIDVIQNFV----DLSRKARREGLLSLEDAIN-------------NLT 107
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +RM++ G I ++M+ EID + + G PA G++G ++
Sbjct: 108 DDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLI 166
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ S I + +G +L T G +++ + NP+ + + + +V
Sbjct: 167 GLIQMLANLTDSSTI-ASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREMVL 225
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P++ E L +ER
Sbjct: 226 EGVLAIQSGVNPRIMEEKLVSYLSPTER 253
>gi|160880838|ref|YP_001559806.1| MotA/TolQ/ExbB proton channel [Clostridium phytofermentans ISDg]
gi|160429504|gb|ABX43067.1| MotA/TolQ/ExbB proton channel [Clostridium phytofermentans ISDg]
Length = 266
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
++G PA G++G ++G+I +G + + G + V+L T G +L+ +C P+++
Sbjct: 150 DNLGAMGPAWGMIGTLIGLINMLGKMEDVASV-GPNMAVALVTTFYGSMLANWICLPVSN 208
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
++KS + + ++ + L++ G P+V E + L ++R E+V QE
Sbjct: 209 KLKSNNASEIMMKEVMVEGLLSIQAGENPRVIEEKLKSFLSPAKRS--ELVGQE 260
>gi|153939356|ref|YP_001391953.1| chemotaxis MotA protein [Clostridium botulinum F str. Langeland]
gi|152935252|gb|ABS40750.1| chemotaxis MotA protein [Clostridium botulinum F str. Langeland]
gi|295319972|gb|ADG00350.1| chemotaxis MotA protein [Clostridium botulinum F str. 230613]
Length = 270
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + II G G + + + I G L ++ P+ K V ++
Sbjct: 8 TPIGLVLCFGLIIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLLVVIV 67
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F + + DV++ +L + +R E ++D N N
Sbjct: 68 QTFKDNGM---SNIDVIQNFV----DLSRKARREGLLSLEDAIN-------------NLT 107
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +RM++ G I ++M+ EID + + G PA G++G ++
Sbjct: 108 DDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLI 166
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ S I + +G +L T G +++ + NP+ + + + +V
Sbjct: 167 GLIQMLANLTDSSTI-ASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREMVL 225
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P++ E L +ER
Sbjct: 226 EGVLAIQSGVNPRIMEEKLVSYLSPTER 253
>gi|46580634|ref|YP_011442.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|120602059|ref|YP_966459.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|46450053|gb|AAS96702.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|120562288|gb|ABM28032.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|311234365|gb|ADP87219.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 253
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 37/278 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T +G+ I +IG MG P I +IV G ++ PL+ + +
Sbjct: 3 IATFVGVIIGFGLVIGAIL-MGAAPGKFIDLPSAMIVFGGTFASILVTFPLEEVWQAVRG 61
Query: 61 LLEIFGYKAL-GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L+ FG + + +D ++++ I SR E ++ V
Sbjct: 62 GLKAFGSRKVEARDIVSTMVRIAEI--------SRREG------------IIALENVQTE 101
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS-----HMGESLPA 174
N L C +I NA I + EI +K H IS +G PA
Sbjct: 102 NPLIKKACQ----LIADNADPTLIRTTVAIEIS-----AMKRRHNISISVFNRLGGFAPA 152
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G++G ++G+++ + L P +G A+ V++ T G +LS + P+ ++K+ +++
Sbjct: 153 FGMIGTLIGLVQMLATL-DDPTTIGPAMAVAIITTFYGALLSNLVFLPIAGKLKARSMQE 211
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+I+ + + + P++ E LP +R S
Sbjct: 212 ELHLLIIFEGAKSILENNNPRLVYEKLSSFLPPKDRKS 249
>gi|229043481|ref|ZP_04191191.1| Chemotaxis protein, MotA [Bacillus cereus AH676]
gi|228725859|gb|EEL77106.1| Chemotaxis protein, MotA [Bacillus cereus AH676]
Length = 277
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLFKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|302343735|ref|YP_003808264.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301640348|gb|ADK85670.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 254
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 121/279 (43%), Gaps = 35/279 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ ++ ++ GG+ + I P I+IV G +G ++ P++ I
Sbjct: 3 LATIIGI-VSAFALVLAAMLYGGSLTMFIDPASILIVIGGTIGVTLINYPMRDIVKLFSI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN------ETENHIDDPYNSTIFTSIP 114
+ +F YK V K++ + + R + +DDP
Sbjct: 62 MKHLFFYK------IVPVGKIISQFVEFATRARREGILALESSMKEVDDP---------- 105
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
F+ +++ I G I+ +++ EID + MG PA
Sbjct: 106 ----------FLAKGLQLTIDG-LEPASIKEILETEIDYVGERHRLGAEIFMTMGTFAPA 154
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+G++G ++G+++ + N+S P +G A+ V++ T G +++ + P++ ++K+ ++
Sbjct: 155 MGMIGTLIGLVQMLQNMSD-PSSIGPAMAVAILTTFYGSVMANMIFLPMSGKLKNRSSEE 213
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
I+ +++ G P+V + +P + R S+
Sbjct: 214 VMTKEIMLNGILSIARGDNPRVIEQKLHSFIPPNLRQSV 252
>gi|299133622|ref|ZP_07026816.1| MotA/TolQ/ExbB proton channel [Afipia sp. 1NLS2]
gi|298591458|gb|EFI51659.1| MotA/TolQ/ExbB proton channel [Afipia sp. 1NLS2]
Length = 257
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGE 170
P LE E F+ +R + G + +NL + + +++ E K Y A+ G+
Sbjct: 93 PVGLEKVETPDPFLAKGIRYVADGYDMDFIRDNLERDRDNFLMHLDEGSKIYRAV---GD 149
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
PA G+VG ++G+++ N++ P LG + +L TL G +++ C P+ ++
Sbjct: 150 CAPAFGMVGTLIGMVQMFANMTD-PSKLGPYMATALLATLYGAVVANLFCLPIADKLHGK 208
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L + I+ ++ + P + E LP R
Sbjct: 209 LLDEETNRTIIIDGILMIRDAKSPTLVREMLLAYLPEKHR 248
>gi|209885629|ref|YP_002289486.1| chemotaxis protein PomA [Oligotropha carboxidovorans OM5]
gi|209873825|gb|ACI93621.1| chemotaxis protein PomA [Oligotropha carboxidovorans OM5]
Length = 257
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGE 170
P LE E F+ +R + G + +NL + + +++ E K Y A+ G+
Sbjct: 93 PMGLEKVETPDPFLAKGIRYVADGYDMDFIRDNLERDRDNFLMHLEEGSKIYRAV---GD 149
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
PA G+VG ++G+++ N++ P LG + +L TL G +++ C P+ ++
Sbjct: 150 CAPAFGMVGTLIGMVQMFANMTD-PSKLGPYMATALLATLYGAVIANLFCLPIADKLHGK 208
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L + I+ ++ + P + E LP R
Sbjct: 209 LLDEETNRTIIIDGILMIRDAKSPTLVREMLLAYLPEKHR 248
>gi|220917667|ref|YP_002492971.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955521|gb|ACL65905.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 261
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 106/263 (40%), Gaps = 36/263 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI G+F + I+ G GG+ L+Q +IV G G ++A P + + +
Sbjct: 3 VTTIAGIFAAVGLILLGQALEGGHVGSLLQATAALIVFGGTFGAVLVAFPRRDVGRALSQ 62
Query: 61 LLEIFGYK-----ALGQD--TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
L +F + AL ++ Y V + +L K I DP
Sbjct: 63 LKLVFAERKVDLGALSRELVEYAGVARRDGVLALEAKL-------PGIPDP--------- 106
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
F+ +++++ G S + ++ +D E G P
Sbjct: 107 -----------FLRRALQLVVDGVDASV-TRSTLEAAVDAEYEEHAVGAKVWEAAGGFAP 154
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
IGI+GA+LG+I M NLS P LG I V+ T+ G+ + L P +++K
Sbjct: 155 TIGILGAVLGLIHVMENLSD-PSKLGGGIAVAFVATVYGVGSANVLFLPFATKMKRKLGA 213
Query: 234 QHRLYIIVKKALIAYMNGAIPQV 256
+ ++ + ++A G P+V
Sbjct: 214 ERDRKTLITEGVLAIQEGINPRV 236
>gi|77359763|ref|YP_339338.1| chemotaxis motA protein [Pseudoalteromonas haloplanktis TAC125]
gi|76874674|emb|CAI85895.1| putative Chemotaxis motA protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 254
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG P IGI+GA+LG+I+AM ++ P+ LG + + T+ G+ L+ L P+ +++
Sbjct: 149 MGGYSPTIGILGAVLGLIQAMSFIT-DPQKLGAGVATAFIATIYGVGLANLLFLPMANKL 207
Query: 228 KSTRLKQHRLY-IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
K R++Q LY ++ + +IA G P V+IE + + +RP++
Sbjct: 208 KQ-RVEQKMLYHEMLAEGVIAISQGESP-VSIELKLEAYRV-DRPNV 251
>gi|332799184|ref|YP_004460683.1| MotA/TolQ/ExbB proton channel [Tepidanaerobacter sp. Re1]
gi|332696919|gb|AEE91376.1| MotA/TolQ/ExbB proton channel [Tepidanaerobacter sp. Re1]
Length = 266
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 128 DYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
D+M+ ++IV ++N+M+ E+ + + + MG PA G++G I+G+
Sbjct: 105 DFMQKGILLIVDGTDPELVKNIMETELAFLEERHSEGQGILETMGALAPAFGLIGTIIGL 164
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I + NL SP+++G + V+L T G +++ P+ ++K + R I++K+
Sbjct: 165 INMLKNL-DSPELIGPGMSVALVTTFYGSLVANLFFIPMAGKLKV----RSREEILIKEV 219
Query: 245 LIAYM 249
+I M
Sbjct: 220 MIEGM 224
>gi|213054485|gb|ACJ39421.1| PomA2 [Aeromonas hydrophila]
Length = 252
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I +M+++I++ + +G+ PA+G++G ++G++ + N+S PK +G A+
Sbjct: 121 IRGVMEKDIELTAERHVIAIKVFRSLGDLGPAMGMIGTLVGLVAMLANMS-DPKSIGPAM 179
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
V+L TL G I + + P+ +++ ++ +V A++ +G P+V
Sbjct: 180 AVALLTTLYGAIEANMIAIPIADKLELRSGEEQLSRCLVLDAIMGIQDGQNPRV 233
>gi|126668170|ref|ZP_01739131.1| Flagellar motor component [Marinobacter sp. ELB17]
gi|126627319|gb|EAZ97955.1| Flagellar motor component [Marinobacter sp. ELB17]
Length = 257
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+GES PAIG++G ++G+++ + L P +G A+ ++L TL G ++ + PL ++
Sbjct: 147 IGESAPAIGMLGTLVGLVQMLNTLD-DPSSIGPAMAIALLTTLYGAFIAQLIALPLADKL 205
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + R +++ ++ + G P+V E L +R S++
Sbjct: 206 QLKAEDEMRNQLLIATSIQKILQGENPRVMTELLSSFLNPEQRDSLK 252
>gi|50954412|ref|YP_061700.1| chemotaxis motility protein A [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950894|gb|AAT88595.1| chemotaxis motility protein A [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 295
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
S ++ +L++EEI + + + MG P +GI+G ++ + + NLS SP LG
Sbjct: 103 SEDLPDLLEEEIQTRTHAEKNASKYFTTMGGYAPTVGIIGPVVSLAHVLENLS-SPDKLG 161
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQI-KSTRLKQHRLYIIVK 242
I + TL G++ + + PL +++ + L+ R+++IV+
Sbjct: 162 PMIASAFIATLWGLVSANFIWLPLGTRLYRLAELESERMHLIVE 205
>gi|78485865|ref|YP_391790.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78364151|gb|ABB42116.1| MotA/TolQ/ExbB family protein [Thiomicrospira crunogena XCL-2]
Length = 255
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 116 VLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
VL+ E+ F +RM++ G ++ ++LM EE + + S +G + PA
Sbjct: 96 VLDKQEVNHGFYRHGVRMLVDGYSKEVIKQSLM-EENKLFVERATTSAGVFSSIGGAAPA 154
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G++G ++G+I+ + NLS P +G A+ V++ TL G +++ P+ +I ++
Sbjct: 155 FGMIGTLVGLIQMLSNLSD-PSSIGPAMAVAMLTTLYGAMIANLFALPMADKINIWVQEE 213
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLP--LSERPSIEIV 276
++ + L+A G P + R++L L +PS E V
Sbjct: 214 SVRQFMIIEGLMAISEGRNPGMM----RELLSPYLENKPSAEEV 253
>gi|326796444|ref|YP_004314264.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326547208|gb|ADZ92428.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 245
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM---GESLPAIGIVG 179
+F ++M I G E L DE I I + K +IS + G P +GI+G
Sbjct: 105 NSFATRALQMAIDGADPDMLYERLHDEAIRI----RDKRQSSISFLESVGGYAPTLGIMG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
++LG+I+AM NL SP+ LG I V+ TL G + + P+ ++ S Q LY
Sbjct: 161 SVLGLIQAMANL-DSPEALGHGIAVAFVSTLYGQGFANLVVFPIAKKL-SNYCDQELLY 217
>gi|196038956|ref|ZP_03106263.1| putative chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|228945330|ref|ZP_04107685.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229090686|ref|ZP_04221919.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-42]
gi|196030101|gb|EDX68701.1| putative chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|228692628|gb|EEL46354.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-42]
gi|228814302|gb|EEM60568.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL+ ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLSEKV 227
>gi|294827704|ref|NP_710843.2| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
gi|293385547|gb|AAN47861.2| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
Length = 244
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P +GI+G ++G++ + NL K LG I + T GI + L PL ++IKS
Sbjct: 151 PTVGIIGTVMGLVGVLENLGAGTKALGEGIATAFIATFYGIAFANLLFFPLANRIKSWSK 210
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIE 259
+Q + + +IA +G ++ +E
Sbjct: 211 EQSDRRQAIIRGVIALQSGDNRRILME 237
>gi|229096213|ref|ZP_04227186.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-29]
gi|229102325|ref|ZP_04233034.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-28]
gi|228681226|gb|EEL35394.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-28]
gi|228687173|gb|EEL41078.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-29]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLMKDIETEVYELRKGATLLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|134292849|ref|YP_001116585.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134136006|gb|ABO57120.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
Length = 254
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 33/244 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GG+ +L Q +VIV G LG ++ N
Sbjct: 5 TLAGVLLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWA---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ D +K L + ++ R H+ D + +L +
Sbjct: 55 -----------RFFDAVKQLRLAFVRAQEVDRK----HLSDLLEWGDRAKLNGLLAFESM 99
Query: 123 -TTFICDYMRM---IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
T I + R ++ S +E+ + E+D +L G P GI+
Sbjct: 100 DVTGIHPFARRGLELLANGVSSAVLEDALQRELDAYERSRLAAARVWHQAGGYAPTFGIL 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQH 235
G++LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + L+
Sbjct: 160 GSVLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFR 218
Query: 236 RLYI 239
+LY+
Sbjct: 219 KLYL 222
>gi|262274768|ref|ZP_06052579.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
gi|262221331|gb|EEY72645.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
Length = 253
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
+ + + PA+G++G ++G++ + N+ PK +G A+ V+L TL G +L+ + P+ +
Sbjct: 144 TALADVAPAMGMIGTLIGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAMLANMVAIPIAN 202
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+++ + ++ ++ L+A +G P+V Y + L +R S+++
Sbjct: 203 KLRLRKDQEKMNRRLIMDGLLAIQDGQNPRVIDGYLKNYLNEKKR-SVDV 251
>gi|196033497|ref|ZP_03100909.1| putative chemotaxis protein MotA [Bacillus cereus W]
gi|195993931|gb|EDX57887.1| putative chemotaxis protein MotA [Bacillus cereus W]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL+ ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLSEKV 227
>gi|229115168|ref|ZP_04244578.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-3]
gi|228668308|gb|EEL23740.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-3]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLMKDIETEVYELRKGATLLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|51246517|ref|YP_066401.1| flagellar motor apparatus (MotA) [Desulfotalea psychrophila LSv54]
gi|50877554|emb|CAG37394.1| related to flagellar motor apparatus (MotA) [Desulfotalea
psychrophila LSv54]
Length = 255
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 111/262 (42%), Gaps = 35/262 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAM----GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD 56
+STI+G+ C G M GG I I I+IV G G ++ P + D
Sbjct: 3 LSTILGI-----CAAFGLMLMAILQGGPLSIFINIPSIMIVFGGTAGNILVHYPFADVFD 57
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIP 114
+ + F YK D +L+ K+G + + N I+DP+ + ++
Sbjct: 58 AINVAKKTFLYKETSASALID--QLMDFANKARKEGILALQASINTIEDPF---LLKAVQ 112
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
++ E T RM++ EID I K + + PA
Sbjct: 113 MAVDGQEPETL----RRMLMT--------------EIDYIQVRHEKGGDIFNALALYAPA 154
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+G+VG ++G+++ + + P +G A+ V+L T G +++ +C P+ ++++ +
Sbjct: 155 MGMVGTLIGLVQMLQTMD-DPSTIGPAMAVALLTTFYGAVIANVVCTPMAGKLRNRSDSE 213
Query: 235 HRLYIIVKKALIAYMNGAIPQV 256
++ + + + ++G P++
Sbjct: 214 ILTKTLIAEGMQSILSGENPRI 235
>gi|86157811|ref|YP_464596.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774322|gb|ABC81159.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
Length = 261
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 44/267 (16%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI G+ + I+ G GG+ L+Q +IV G G ++A P + D G
Sbjct: 3 VTTIAGIAAAVGLILLGQALEGGHVGSLLQATAALIVFGGTFGAVLVAFPRR---DVG-- 57
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
KAL Q LKL++ TE +D S V +
Sbjct: 58 -------KALSQ------LKLVF-------------TERKVDLGALSRELVDYAGVARRD 91
Query: 121 ELTT-----------FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
+ F+ +++++ G S + ++ +D E++ G
Sbjct: 92 GVLALEARLPGIPDPFLRRALQLVVDGVDASV-TRSTLEAAVDADFEERVVGAKVWEAAG 150
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
P +GI+GA+LG+I M NLS P LG I V+ T+ G+ + L P +++K
Sbjct: 151 GFAPTVGILGAVLGLIHVMENLSD-PSKLGGGIAVAFVATVYGVGSANVLFLPFANKMKR 209
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQV 256
+ +V + ++A G P+V
Sbjct: 210 KLGAERDRKTLVTEGVLAIQEGINPRV 236
>gi|296156472|ref|ZP_06839310.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295893071|gb|EFG72851.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 254
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 29/242 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G + I+ GF GG+ L Q VIV G G ++ N D G+ L
Sbjct: 5 TLFGAVFGVTAIVVGFSLEGGHFTSLFQLEAFVIVVGGTFGAVMIQNTWARFYD-GLKQL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ KA D + L +L L+ G + + + +F SI +
Sbjct: 64 RLAFVKARQVDR--ETLAVL------LEWGDQAKLNGML-------VFESIGA----GGI 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK--LKPYHAISHMGESLPAIGIVGA 180
F + ++ G + + +E+ + E+ + YE+ + G P GI+GA
Sbjct: 105 NPFAQRGLELLANGVSTAV-LEDALQREL--LAYERNHMAAARIWQQAGGYAPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRL 237
+LG+I+ G+L + P LG I ++ TL G+ L+ + PL +I++ + L+ RL
Sbjct: 162 VLGLIQVTGHLLE-PAQLGQGIAMAFVATLYGLALANLVFLPLYGKIRAQVDSELRFRRL 220
Query: 238 YI 239
Y+
Sbjct: 221 YL 222
>gi|291485405|dbj|BAI86480.1| flagellar motor protein MotP [Bacillus subtilis subsp. natto
BEST195]
Length = 280
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVS 205
+MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++
Sbjct: 140 VMDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLN-DPHMLGPNMAIA 198
Query: 206 LTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
L TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 199 LLTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR 248
>gi|228914306|ref|ZP_04077921.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228845300|gb|EEM90336.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL+ ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLSEKV 227
>gi|228952107|ref|ZP_04114202.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228807639|gb|EEM54163.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|229069279|ref|ZP_04202569.1| Chemotaxis protein, MotA [Bacillus cereus F65185]
gi|229078909|ref|ZP_04211461.1| Chemotaxis protein, MotA [Bacillus cereus Rock4-2]
gi|228704323|gb|EEL56757.1| Chemotaxis protein, MotA [Bacillus cereus Rock4-2]
gi|228713766|gb|EEL65651.1| Chemotaxis protein, MotA [Bacillus cereus F65185]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|321312512|ref|YP_004204799.1| flagellar motor protein MotP [Bacillus subtilis BSn5]
gi|320018786|gb|ADV93772.1| flagellar motor protein MotP [Bacillus subtilis BSn5]
Length = 272
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVS 205
+MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++
Sbjct: 132 VMDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLN-DPHMLGPNMAIA 190
Query: 206 LTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
L TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 191 LLTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR 240
>gi|45658759|ref|YP_002845.1| chemotaxis motility protein A [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602003|gb|AAS71482.1| chemotaxis motility protein A [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 252
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P +GI+G ++G++ + NL K LG I + T GI + L PL ++IKS
Sbjct: 159 PTVGIIGTVMGLVGVLENLGAGTKALGEGIATAFIATFYGIAFANLLFFPLANRIKSWSK 218
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIE 259
+Q + + +IA +G ++ +E
Sbjct: 219 EQSDRRQAIIRGVIALQSGDNRRILME 245
>gi|75760653|ref|ZP_00740681.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74491867|gb|EAO55055.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|228920438|ref|ZP_04083783.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839068|gb|EEM84364.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|296332049|ref|ZP_06874513.1| flagellar motor protein MotP [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675556|ref|YP_003867228.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296150820|gb|EFG91705.1| flagellar motor protein MotP [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305413800|gb|ADM38919.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 280
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVS 205
+MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++
Sbjct: 140 VMDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLN-DPHMLGPNMAIA 198
Query: 206 LTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
L TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 199 LLTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGIQSGKNPR 248
>gi|206970702|ref|ZP_03231654.1| putative chemotaxis protein MotA [Bacillus cereus AH1134]
gi|218231406|ref|YP_002366412.1| flagellar motor protein MotP [Bacillus cereus B4264]
gi|218896659|ref|YP_002445070.1| putative chemotaxis protein MotA [Bacillus cereus G9842]
gi|228900308|ref|ZP_04064538.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 4222]
gi|228907360|ref|ZP_04071218.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 200]
gi|228958006|ref|ZP_04119743.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228964709|ref|ZP_04125816.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|229109184|ref|ZP_04238783.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-15]
gi|229127053|ref|ZP_04256052.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-Cer4]
gi|229144339|ref|ZP_04272745.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST24]
gi|229149928|ref|ZP_04278156.1| Chemotaxis protein, MotA [Bacillus cereus m1550]
gi|229178136|ref|ZP_04305507.1| Chemotaxis protein, MotA [Bacillus cereus 172560W]
gi|296502309|ref|YP_003664009.1| flagellar motor protein MotP [Bacillus thuringiensis BMB171]
gi|206734338|gb|EDZ51508.1| putative chemotaxis protein MotA [Bacillus cereus AH1134]
gi|218159363|gb|ACK59355.1| putative chemotaxis protein MotA [Bacillus cereus B4264]
gi|218545199|gb|ACK97593.1| putative chemotaxis protein MotA [Bacillus cereus G9842]
gi|228605266|gb|EEK62716.1| Chemotaxis protein, MotA [Bacillus cereus 172560W]
gi|228633609|gb|EEK90210.1| Chemotaxis protein, MotA [Bacillus cereus m1550]
gi|228639126|gb|EEK95550.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST24]
gi|228656406|gb|EEL12245.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-Cer4]
gi|228674194|gb|EEL29439.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-15]
gi|228794959|gb|EEM42458.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228801713|gb|EEM48593.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228852221|gb|EEM97017.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 200]
gi|228859343|gb|EEN03773.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 4222]
gi|296323361|gb|ADH06289.1| flagellar motor protein MotP [Bacillus thuringiensis BMB171]
Length = 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|30019772|ref|NP_831403.1| flagellar motor protein MotP [Bacillus cereus ATCC 14579]
gi|29895317|gb|AAP08604.1| Chemotaxis motA protein [Bacillus cereus ATCC 14579]
Length = 254
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+
Sbjct: 104 FIQKGIRLMLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 162
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 163 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 204
>gi|16080025|ref|NP_390851.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. 168]
gi|221310917|ref|ZP_03592764.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. 168]
gi|221324442|ref|ZP_03605736.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. SMY]
gi|732299|sp|P39063|YTXD_BACSU RecName: Full=Uncharacterized protein YtxD
gi|348048|gb|AAA68282.1| putative [Bacillus subtilis]
gi|2293222|gb|AAC00300.1| YtxD [Bacillus subtilis]
gi|2635457|emb|CAB14951.1| putative flagellar motor component [Bacillus subtilis subsp.
subtilis str. 168]
Length = 272
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVS 205
+MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++
Sbjct: 132 VMDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLN-DPHMLGPNMAIA 190
Query: 206 LTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
L TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 191 LLTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR 240
>gi|148254924|ref|YP_001239509.1| putative chemotaxis protein MotA (flagellar motor component)
[Bradyrhizobium sp. BTAi1]
gi|146407097|gb|ABQ35603.1| putative chemotaxis protein MotA (Flagellar motor component)
[Bradyrhizobium sp. BTAi1]
Length = 257
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGE 170
P LE E F+ +R + G + +NL + + +++ E K Y AI G+
Sbjct: 93 PVGLEKVETDEPFLAKGIRYVADGYDLEFIRDNLERDRDNFLMHLDEGSKIYRAI---GD 149
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
PA G+VG ++G+++ N++ P LG + +L TL G ++S +C P+ ++
Sbjct: 150 CAPAFGMVGTLIGMVQMFANMTD-PSKLGPFMATALLATLYGALVSNLICLPIADKLHGK 208
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L + ++ ++ + P + E LP R
Sbjct: 209 LLDEETNRTLIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|221315244|ref|ZP_03597049.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221320161|ref|ZP_03601455.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. JH642]
Length = 273
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVS 205
+MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++
Sbjct: 133 VMDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLN-DPHMLGPNMAIA 191
Query: 206 LTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
L TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 192 LLTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR 241
>gi|209694504|ref|YP_002262432.1| flagellar motor protein PomA [Aliivibrio salmonicida LFI1238]
gi|208008455|emb|CAQ78621.1| sodium-driven polar flagellar protein MotA [Aliivibrio salmonicida
LFI1238]
Length = 254
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
+ G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G ++S + P+
Sbjct: 144 TAFGDVAPAMGMIGTLIGLVGMLSNM-DDPKSIGPAMAVALLTTLYGSVISNMIAFPIAH 202
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+++ + ++ ++ ++A +G P+V Y R L +R
Sbjct: 203 KLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRNYLNEKKR 247
>gi|168180923|ref|ZP_02615587.1| chemotaxis MotA protein [Clostridium botulinum NCTC 2916]
gi|182668370|gb|EDT80349.1| chemotaxis MotA protein [Clostridium botulinum NCTC 2916]
Length = 270
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + +I G G + + + I G L ++ P+ K V ++
Sbjct: 8 TPIGLVLCFGLVIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLLVVIV 67
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F + + DV++ +L + +R E ++D N N
Sbjct: 68 QTFKDNGM---SNIDVIQNFV----DLSRKARREGLLSLEDAIN-------------NLT 107
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +RM++ G I ++M+ EID + + G PA G++G ++
Sbjct: 108 DDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLI 166
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ S I + +G +L T G +++ + NP+ + + + +V
Sbjct: 167 GLIQMLANLTDSSTI-ASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREMVL 225
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P++ E L +ER
Sbjct: 226 EGVLAIQSGVNPRIMEEKLVSYLSPTER 253
>gi|269103245|ref|ZP_06155942.1| Flagellar motor rotation protein MotA [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163143|gb|EEZ41639.1| Flagellar motor rotation protein MotA [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 253
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
+ G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G IL+ + P+
Sbjct: 144 TSFGDVGPAMGMIGTLIGLVAMLSNMD-DPKSIGPAMAVALLTTLYGSILANMVALPIAD 202
Query: 226 QIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ S R Q RL ++ ++A +G P+V Y + L +R
Sbjct: 203 KL-SLRKDQERLNRRLILDGVLAIQDGQNPRVIDGYLKNYLHEKKR 247
>gi|242281266|ref|YP_002993395.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242124160|gb|ACS81856.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 253
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA+G++G ++G+++ + +S P +G A+ V+L TL G IL+ + P++ ++K+
Sbjct: 153 PAMGMIGTVIGLVQMLQTMSD-PSTIGPAMAVALLTTLYGAILANLVFTPMSGKLKTRSK 211
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLP 266
++ L +V + +I+ G P++ E LP
Sbjct: 212 EEILLREMVMEGIISISKGENPKIIEEKLNSFLP 245
>gi|194365635|ref|YP_002028245.1| flagellar motor protein [Stenotrophomonas maltophilia R551-3]
gi|194348439|gb|ACF51562.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 246
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG P +GI+GA+LG+I M NL+ P LG I + T T+ GI + L P+ +++
Sbjct: 149 MGIYAPTLGIIGAVLGLIAVMKNLA-DPSKLGHGIAAAFTATIYGIASANLLFLPIAAKL 207
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
KS R ++ + LI+ G P+
Sbjct: 208 KSVISHNTRDREMIIEGLISIAQGENPR 235
>gi|229172374|ref|ZP_04299933.1| Chemotaxis protein, MotA [Bacillus cereus MM3]
gi|228610845|gb|EEK68108.1| Chemotaxis protein, MotA [Bacillus cereus MM3]
Length = 277
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|117921339|ref|YP_870531.1| flagellar motor protein PomA [Shewanella sp. ANA-3]
gi|117613671|gb|ABK49125.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 255
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
Query: 150 EIDIILYEK-----LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E DI L E+ + + A +G PA+G++G ++G++ + N+S PK +G ++ V
Sbjct: 126 EKDIALTEERHRNGIAIFRAFGDVG---PAMGMIGTLVGLVAMLSNMS-DPKSIGPSMAV 181
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRK 263
+L TL G +++ +C P+ ++ + R+ + L ++ A++A +G P+V + +
Sbjct: 182 ALLTTLYGAVVANMVCIPIADKL-TLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKN 240
Query: 264 VLPLSER 270
L +R
Sbjct: 241 YLAEKQR 247
>gi|311069472|ref|YP_003974395.1| flagellar motor protein MotP [Bacillus atrophaeus 1942]
gi|310869989|gb|ADP33464.1| flagellar motor protein MotP [Bacillus atrophaeus 1942]
Length = 273
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVS 205
+MD EI + K + GE PA G++G ++G++ + NL+ P +LG + V+
Sbjct: 132 VMDSEIAAMEERHRKGRRVLEKAGEFAPAWGMIGTLVGLVLMLKNLN-DPGMLGPNMAVA 190
Query: 206 LTGTLLGIILSYSLCNPLTSQIKS 229
L TL G +L+ + NP+ ++++
Sbjct: 191 LLTTLYGSLLANMVFNPIAAKLEE 214
>gi|203284202|ref|YP_002221942.1| flagellar motor rotation protein A [Borrelia duttonii Ly]
gi|203287741|ref|YP_002222756.1| flagellar motor rotation protein A [Borrelia recurrentis A1]
gi|201083645|gb|ACH93236.1| flagellar motor rotation protein A [Borrelia duttonii Ly]
gi|201084961|gb|ACH94535.1| flagellar motor rotation protein A [Borrelia recurrentis A1]
Length = 261
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA G++G ++G+I +GNL + LG+++ V+L TL G I+S + P+ +++S L
Sbjct: 154 PAFGMIGTLIGLIALLGNL-EDRSALGSSMAVALVTTLYGTIMSNLMLTPIQLKLESIDL 212
Query: 233 KQHRLYIIVKKALIAYMNGAIPQV 256
++ + ++ + +++ G P++
Sbjct: 213 EEASVRAMIVEGILSIQAGDNPRI 236
>gi|150388138|ref|YP_001318187.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
gi|149948000|gb|ABR46528.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
Length = 280
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E TF+ D M +++ RS IE+++D +I+ K ++ ++ + PA G++
Sbjct: 111 DQEENTFLRDAM-ILLNDYKRSDAIEDILDNDIESRQMNLYKCHNVLNMIAHIAPAFGLI 169
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK---STRLKQH 235
G ++G+I + N+S +I+ + +L TL G +++ + PL +++K R+ Q+
Sbjct: 170 GTLVGMIGLLANISIPDQIMNN-MAAALVSTLYGSLIANIIAVPLMARLKEHIEQRVLQY 228
Query: 236 RL 237
R+
Sbjct: 229 RI 230
>gi|145298031|ref|YP_001140872.1| flagellar motor protein PomA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850803|gb|ABO89124.1| Flagellar motor protein PomA [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 252
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ TF+ + M++ G+ I +++++I++ + +G+ PA+
Sbjct: 95 LEAAEVPNTFMKKGIDMLVDGHDADV-IRAVLEKDIELTAERHVIAIKVFRALGDLGPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+S PK +G A+ V+L TL G I + + P+ +++ ++
Sbjct: 154 GMIGTLVGLVAMLANMS-DPKSIGPAMAVALLTTLYGAIEANMIAIPIADKLELRSGEEQ 212
Query: 236 RLYIIVKKALIAYMNGAIPQV 256
+V A++ +G P+V
Sbjct: 213 LSRCLVLDAIMGIQDGQNPRV 233
>gi|254248922|ref|ZP_04942242.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|124875423|gb|EAY65413.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
Length = 260
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL- 61
T++G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+ L
Sbjct: 11 TLVGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQLR 70
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENN 120
L + + + D+L+ G R + + + + S + I P
Sbjct: 71 LAFVRAREVDRKNLSDLLEW----------GDRAKLDGLL--AFESMDVSGIHPFARRGL 118
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL + + +E+ + E+D +L G P GI+G+
Sbjct: 119 EL-----------LANGVSTAVLEDALQRELDAYERSRLAAVRVWQQAGGYAPTFGILGS 167
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRL 237
+LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + ++ +L
Sbjct: 168 VLGLVQVTSHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAQIDSEMRFRKL 226
Query: 238 YI 239
Y+
Sbjct: 227 YL 228
>gi|227815518|ref|YP_002815527.1| flagellar motor protein MotP [Bacillus anthracis str. CDC 684]
gi|227007728|gb|ACP17471.1| flagellar motor protein MotP [Bacillus anthracis str. CDC 684]
Length = 178
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 28 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 86
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 87 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 128
>gi|118477163|ref|YP_894314.1| flagellar motor protein MotP [Bacillus thuringiensis str. Al Hakam]
gi|118416388|gb|ABK84807.1| chemotaxis protein, MotA [Bacillus thuringiensis str. Al Hakam]
Length = 284
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 134 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 192
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 193 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 234
>gi|225863586|ref|YP_002748964.1| putative chemotaxis protein MotA [Bacillus cereus 03BB102]
gi|225788831|gb|ACO29048.1| putative chemotaxis protein MotA [Bacillus cereus 03BB102]
Length = 277
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|228926762|ref|ZP_04089830.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832875|gb|EEM78444.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 277
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|196045128|ref|ZP_03112361.1| putative chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|229183919|ref|ZP_04311135.1| Chemotaxis protein, MotA [Bacillus cereus BGSC 6E1]
gi|196024130|gb|EDX62804.1| putative chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|228599571|gb|EEK57175.1| Chemotaxis protein, MotA [Bacillus cereus BGSC 6E1]
Length = 277
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|258592567|emb|CBE68876.1| MotA/TolQ/ExbB proton channel precursor [NC10 bacterium 'Dutch
sediment']
Length = 252
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 102/255 (40%), Gaps = 27/255 (10%)
Query: 6 GLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF 65
GL I + I+G GG+ + +I+AG +G ++ LK +
Sbjct: 8 GLAIGLTAIVGSVLLDGGDLRAFVNLPAFLIIAGGTVGATMVTASLK----------DTL 57
Query: 66 GYKALGQDTYCDVLKL----LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
L + C + L + + + +L + +R E + D ++ N
Sbjct: 58 ALPKLMKRALCAGVALEPHEVIVTLVDLAQTARKEGVLALQDRVSA------------NG 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ F+ + ++I G A + +M EI + +K MG P +GI+G +
Sbjct: 106 VDPFLRKGIELVIDG-ADETIVREIMQAEIHSMKARHVKGIEIFGIMGGYAPTMGIIGTV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ + L + LG I V+ T GI + L P++ +K + R+ ++
Sbjct: 165 MGLVHVLSKLGEGTDSLGRGIAVAFLATFYGIFSANVLFLPISGNLKVKSEAEVRIREVM 224
Query: 242 KKALIAYMNGAIPQV 256
+ ++ +G P +
Sbjct: 225 MEGVLGIQSGLNPHM 239
>gi|224370726|ref|YP_002604890.1| MotA3 [Desulfobacterium autotrophicum HRM2]
gi|223693443|gb|ACN16726.1| MotA3 [Desulfobacterium autotrophicum HRM2]
Length = 298
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
+I ++ E+ + + + M E PA G+VG+++G+I + + S I+ T
Sbjct: 133 QIRESLNAEMFFFRLRREETSRVLQTMAEVAPAFGLVGSVVGLIGTIAGVGDSAMIMST- 191
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+ ++LT TL GI+L+ P + I+ K+ L I+ + + A P++
Sbjct: 192 VPIALTSTLYGIVLANFFFLPFAANIRERTAKELMLQKIITEGVAAIAGDLHPRM 246
>gi|52143731|ref|YP_083098.1| flagellar motor protein MotP [Bacillus cereus E33L]
gi|51977200|gb|AAU18750.1| chemotaxis protein [Bacillus cereus E33L]
Length = 277
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|49477309|ref|YP_035847.1| flagellar motor protein MotP [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|218902842|ref|YP_002450676.1| putative chemotaxis protein MotA [Bacillus cereus AH820]
gi|228933011|ref|ZP_04095874.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229121279|ref|ZP_04250510.1| Chemotaxis protein, MotA [Bacillus cereus 95/8201]
gi|49328865|gb|AAT59511.1| chemotaxis protein MotA [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218537884|gb|ACK90282.1| putative chemotaxis protein MotA [Bacillus cereus AH820]
gi|228662124|gb|EEL17733.1| Chemotaxis protein, MotA [Bacillus cereus 95/8201]
gi|228826612|gb|EEM72383.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 277
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL+ ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLSEKV 227
>gi|114563952|ref|YP_751466.1| flagellar motor protein PomA [Shewanella frigidimarina NCIMB 400]
gi|114335245|gb|ABI72627.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 255
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
TF+ + M++ G+ + N ++++I + MG+ PA+G++G ++G
Sbjct: 103 TFMQKAVDMLVDGHDGDV-VRNALEKDIALTEERHKTGVGIFKAMGDVAPAMGMIGTLVG 161
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVK 242
++ + N+ PK +G ++ V+L TL G +++ + P+ ++ S R+ + L ++
Sbjct: 162 LVAMLSNM-DDPKSIGPSMAVALLTTLYGAVIANMIAIPMADKL-SLRMNEELLNRNLIM 219
Query: 243 KALIAYMNGAIPQV 256
A++A +G P+V
Sbjct: 220 DAVLAIQDGQNPRV 233
>gi|301053264|ref|YP_003791475.1| flagellar motor protein [Bacillus anthracis CI]
gi|300375433|gb|ADK04337.1| flagellar motor protein [Bacillus cereus biovar anthracis str. CI]
Length = 277
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLIKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|254519160|ref|ZP_05131216.1| MotA/TolQ/ExbB proton channel family protein [Clostridium sp.
7_2_43FAA]
gi|226912909|gb|EEH98110.1| MotA/TolQ/ExbB proton channel family protein [Clostridium sp.
7_2_43FAA]
Length = 260
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 31/221 (14%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
CII GF GG L Q ++IV G +G +A P K +K
Sbjct: 15 CIIVGFLLEGGALGALYQFTALLIVVGGTIGAVGVAFPGKTLK----------------- 57
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETEN-----HIDDPYNSTIFTSIPTVLENNELTTFIC 127
+ + KK + N EN I S+ L N E TFI
Sbjct: 58 -------RFPKVFSIAFKKRNSNLIENVEFFKKITVKTRKNGLLSLEADLNNPETDTFIK 110
Query: 128 DYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
++MI+ G ++ ++ ++ I + G P +GI+G ++G+++
Sbjct: 111 KGLQMIVDGVDPEI-MKGSLETRLEQISERHNQGISIFEAAGGYAPTMGIIGTVMGLVQV 169
Query: 188 MGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
+ NL P LG I V+ TL GI + + P+ +++K
Sbjct: 170 LSNL-DDPSTLGPKIAVAFIATLYGIGTANLIWLPIANKLK 209
>gi|30261728|ref|NP_844105.1| flagellar motor protein MotP [Bacillus anthracis str. Ames]
gi|47526944|ref|YP_018293.1| flagellar motor protein MotP [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184554|ref|YP_027806.1| flagellar motor protein MotP [Bacillus anthracis str. Sterne]
gi|65318993|ref|ZP_00391952.1| COG1291: Flagellar motor component [Bacillus anthracis str. A2012]
gi|254723804|ref|ZP_05185590.1| flagellar motor protein MotP [Bacillus anthracis str. A1055]
gi|254734567|ref|ZP_05192279.1| flagellar motor protein MotP [Bacillus anthracis str. Western North
America USA6153]
gi|254759754|ref|ZP_05211778.1| flagellar motor protein MotP [Bacillus anthracis str. Australia 94]
gi|300117354|ref|ZP_07055144.1| flagellar motor protein MotP [Bacillus cereus SJ1]
gi|30255956|gb|AAP25591.1| putative chemotaxis protein MotA [Bacillus anthracis str. Ames]
gi|47502092|gb|AAT30768.1| putative chemotaxis protein MotA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178481|gb|AAT53857.1| chemotaxis protein MotA, putative [Bacillus anthracis str. Sterne]
gi|298725189|gb|EFI65841.1| flagellar motor protein MotP [Bacillus cereus SJ1]
Length = 254
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 104 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 162
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 163 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 204
>gi|256376463|ref|YP_003100123.1| MotA/TolQ/ExbB proton channel [Actinosynnema mirum DSM 43827]
gi|255920766|gb|ACU36277.1| MotA/TolQ/ExbB proton channel [Actinosynnema mirum DSM 43827]
Length = 257
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 140 SYEIENLMDEEIDII-LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
S EI +++ EI+ Y+K+ + MG P IGI+G +LG+I + NLS P L
Sbjct: 121 SKEIREILEGEIETKQRYDKVG-VKMFTDMGALAPTIGIIGTVLGLIHVLENLSD-PAKL 178
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKS-TRLKQHRLYIIVKKALIAYMNGAIPQV 256
G I + TL G++ + ++ P+ +++K + L+ ++ ++V + ++A G+ P++
Sbjct: 179 GHLIAGAFVATLWGVMTANAIWLPIGNRLKRISDLECEQMEVVV-EGVLAIQAGSNPRL 236
>gi|254683215|ref|ZP_05147076.1| flagellar motor protein MotP [Bacillus anthracis str. CNEVA-9066]
gi|254740976|ref|ZP_05198664.1| flagellar motor protein MotP [Bacillus anthracis str. Kruger B]
Length = 254
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 104 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 162
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 163 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 204
>gi|59711321|ref|YP_204097.1| flagellar motor protein PomA [Vibrio fischeri ES114]
gi|197334887|ref|YP_002155477.1| chemotaxis protein PomA [Vibrio fischeri MJ11]
gi|59479422|gb|AAW85209.1| flagellar motor protein MotA1 [Vibrio fischeri ES114]
gi|197316377|gb|ACH65824.1| chemotaxis protein PomA [Vibrio fischeri MJ11]
Length = 254
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
+ G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G ++S + P+
Sbjct: 144 TAFGDVAPAMGMIGTLVGLVGMLSNM-DDPKSIGPAMAVALLTTLYGSVISNMVAFPIAH 202
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+++ + ++ ++ ++A +G P+V Y R L +R
Sbjct: 203 KLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRNYLNEKKR 247
>gi|328958274|ref|YP_004375660.1| flagellar motor protein MotP [Carnobacterium sp. 17-4]
gi|328674598|gb|AEB30644.1| flagellar motor protein MotP [Carnobacterium sp. 17-4]
Length = 269
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 115/269 (42%), Gaps = 32/269 (11%)
Query: 23 GNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLL 82
GN + +VI G +++ PLK IK L I K L D D KL+
Sbjct: 26 GNIASFVDAPSLVITLGGSFSAILISFPLKSIK----KLPSIL--KKLVLDPNPDYAKLI 79
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
+L + +R++ I++ V ++NEL + ++M++ G E
Sbjct: 80 ETF-ASLSRKARSQGILAIEEDI----------VEQDNEL---MVTGLQMVVDG----LE 121
Query: 143 IENLMDEEIDIILYEKLKPYHAISH-----MGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
E + D I I E ++ H++ GE PA G++G ++G++ +G L+ P
Sbjct: 122 PETVRD--IMEITSENIEKRHSVGQDIFLKWGEMAPAFGMIGTLIGLVIMLGELN-DPST 178
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+G + +L T G L+ + P+ S ++ ++ + ++ + +++ G P+V
Sbjct: 179 IGVGMATALITTFYGSFLANLIFIPIASNLQMQTNEEMKFCEMIIEGVLSLQAGENPRVI 238
Query: 258 IEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+ + +P + A+ + Q N
Sbjct: 239 EQKLKSYMPFESKEDATKAAENLQQEEQN 267
>gi|170736168|ref|YP_001777428.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|206562637|ref|YP_002233400.1| chemotaxis protein PomA [Burkholderia cenocepacia J2315]
gi|169818356|gb|ACA92938.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|198038677|emb|CAR54637.1| chemotaxis protein PomA [Burkholderia cenocepacia J2315]
Length = 254
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL- 61
T++G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+ L
Sbjct: 5 TLVGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQLR 64
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENN 120
L + + + D+L+ G R + + + + S + I P
Sbjct: 65 LAFVRAREVDRKNLSDLLEW----------GDRAKLDGLL--AFESMDVSGIHPFARRGL 112
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL + + +E+ + E+D +L G P GI+G+
Sbjct: 113 EL-----------LANGVSTAVLEDALQRELDAYERSRLAAVRVWQQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRL 237
+LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + ++ +L
Sbjct: 162 VLGLVQVTSHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAQIDSEMRFRKL 220
Query: 238 YI 239
Y+
Sbjct: 221 YL 222
>gi|120552992|ref|YP_957343.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120322841|gb|ABM17156.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 257
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+GES PAIG++G ++G+++ + L P +G A+ ++L TL G ++ + PL ++
Sbjct: 147 IGESAPAIGMLGTLVGLVQMLNTLD-DPSSIGPAMAIALLTTLYGAFIAQLMALPLADKL 205
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
+ R +++ ++ + M G P+V E
Sbjct: 206 QLKAEDDARNQMLIITSIKSIMRGENPRVMTE 237
>gi|229058359|ref|ZP_04196743.1| Chemotaxis protein, MotA [Bacillus cereus AH603]
gi|228719868|gb|EEL71458.1| Chemotaxis protein, MotA [Bacillus cereus AH603]
Length = 277
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G + E++ ++ +++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDEA-ELKEVLMRDVETEVYELRKGATLLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +++ + PL+ ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVIANMIAIPLSEKV 227
>gi|42521781|ref|NP_967161.1| chemotaxis motA protein [Bdellovibrio bacteriovorus HD100]
gi|39574311|emb|CAE77815.1| chemotaxis motA protein [Bdellovibrio bacteriovorus HD100]
Length = 262
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 38/255 (14%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T IG+ + + I+ G GG+ L+Q +IV +G ++++ K +K +G+ L
Sbjct: 16 ATWIGILVGVGGILLGNLLEGGHTSSLMQLTAFIIVLTGTIGAVMVSSSEKDLK-TGLQL 74
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET-------ENHIDDPYNSTIFTSIP 114
+ KA + ++L I+ + + ++ E N I+DP + +
Sbjct: 75 AK----KAFRHEESRSKVRLNEIV--DCARLAKKENILALEPRLNRIEDPLLKGVLRN-- 126
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
V++ ++TT I ++ + +I E L + G P
Sbjct: 127 -VVDGVDITT------------------IRDIFETQIHTEEEELLGGAKIWTDAGGFAPT 167
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS--TRL 232
IGI+GA+LG+I MGNL+ + K LG I V+ T+ G+ + L PL +++K L
Sbjct: 168 IGIIGAVLGLIHVMGNLTDTSK-LGAGIAVAFVATVYGVSSANLLFLPLGNKLKRRVQAL 226
Query: 233 KQHRLYIIVKKALIA 247
+ ++ ++ LIA
Sbjct: 227 TREKMMVLEGGLLIA 241
>gi|292492680|ref|YP_003528119.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291581275|gb|ADE15732.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 254
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 126/271 (46%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL I+ ++ G +G + + P I+IV G + +M L S
Sbjct: 3 LATLIGL-ISSFGVVAGAILLGSSVLVFFNPPSILIVLGGTIAVVLMKFSLSQFLGSFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F YKA + +++K + +K E+ D N + + +++ +
Sbjct: 62 AMKAFVYKA---EKPEEIIKQALEMANTARKDGLLALESW--DIKNEFMKKGVTLLVDGH 116
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E + +R +++ R + + ++I + AI G+ PA+G++G
Sbjct: 117 E-----PEMVRRVLMTELRQTLERHDLGQKI----------FRAI---GDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL-YI 239
++G+++ + ++ PK +G A+ V+L TL G +++ + P ++ + R + RL
Sbjct: 159 LIGLVQMLSSMD-DPKKIGPAMAVALLTTLYGAMIANMVALPFADKL-ALRSNEERLNRF 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ +++++ G P+V E +P S+R
Sbjct: 217 IIIESILSIQQGHNPRVLEELLLTFMPGSKR 247
>gi|163939533|ref|YP_001644417.1| flagellar motor protein MotP [Bacillus weihenstephanensis KBAB4]
gi|229132540|ref|ZP_04261389.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST196]
gi|229166568|ref|ZP_04294320.1| Chemotaxis protein, MotA [Bacillus cereus AH621]
gi|163861730|gb|ABY42789.1| MotA/TolQ/ExbB proton channel [Bacillus weihenstephanensis KBAB4]
gi|228616822|gb|EEK73895.1| Chemotaxis protein, MotA [Bacillus cereus AH621]
gi|228650886|gb|EEL06872.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST196]
Length = 277
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G + E++ ++ +++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDEA-ELKEVLMRDVETEVYELRKGATLLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +++ + PL+ ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVIANMIAIPLSEKV 227
>gi|221635438|ref|YP_002523314.1| chemotaxis protein PomA [Thermomicrobium roseum DSM 5159]
gi|221157783|gb|ACM06901.1| chemotaxis protein PomA [Thermomicrobium roseum DSM 5159]
Length = 267
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
LEN+ + M++V + E ++ +++ + + Y MG P +G
Sbjct: 96 LENHPIEDPFLKKGIMLVVDGTDAELTEQILWADVEAMEQRHARGYGIFQTMGGFAPTMG 155
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
I+G ++G++ + +L + P+ LG AI V+ TL G+ + L PL +++K
Sbjct: 156 IIGTVMGLVHVLSSL-KDPESLGPAIAVAFLATLYGVATANLLWLPLHNKLK 206
>gi|120599625|ref|YP_964199.1| flagellar motor protein PomA [Shewanella sp. W3-18-1]
gi|146292381|ref|YP_001182805.1| flagellar motor protein PomA [Shewanella putrefaciens CN-32]
gi|120559718|gb|ABM25645.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|145564071|gb|ABP75006.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|319425681|gb|ADV53755.1| stator-force generator of Na+ coupled flagellar motor, PomA
[Shewanella putrefaciens 200]
Length = 255
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 117 LENNELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE +++ +F+ + M++ G+ + ++++ID+ G+ PA+
Sbjct: 95 LEEAQISNSFMQKAVDMLVDGHDGEV-VRAALEKDIDLTEERHRNGIAIFRAFGDVGPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+S PK +G A+ V+L TL G +L+ + P+ ++ S R+ +
Sbjct: 154 GMIGTLVGLVAMLSNMS-DPKSIGPAMAVALLTTLYGAMLANMVAIPIADKL-SLRMGEE 211
Query: 236 RL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L ++ A++A +G P+V + + L +R
Sbjct: 212 MLNRNLIMDAVLAIQDGQNPRVIEGFLKNYLAEKQR 247
>gi|38327417|gb|AAR17737.1| motility protein A [Bdellovibrio bacteriovorus]
Length = 250
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 38/255 (14%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T IG+ + + I+ G GG+ L+Q +IV +G ++++ K +K +G+ L
Sbjct: 4 ATWIGILVGVGGILLGNLLEGGHTSSLMQLTAFIIVLTGTIGAVMVSSSEKDLK-TGLQL 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET-------ENHIDDPYNSTIFTSIP 114
+ KA + ++L I+ + + ++ E N I+DP + +
Sbjct: 63 AK----KAFRHEESRSKVRLNEIV--DCARLAKKENILALEPRLNRIEDPLLKGVLRN-- 114
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
V++ ++TT I ++ + +I E L + G P
Sbjct: 115 -VVDGVDITT------------------IRDIFETQIHTEEEELLGGAKIWTDAGGFAPT 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS--TRL 232
IGI+GA+LG+I MGNL+ + K LG I V+ T+ G+ + L PL +++K L
Sbjct: 156 IGIIGAVLGLIHVMGNLTDTSK-LGAGIAVAFVATVYGVSSANLLFLPLGNKLKRRVQAL 214
Query: 233 KQHRLYIIVKKALIA 247
+ ++ ++ LIA
Sbjct: 215 TREKMMVLEGGLLIA 229
>gi|107026972|ref|YP_624483.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116691832|ref|YP_837365.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|105896346|gb|ABF79510.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116649832|gb|ABK10472.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
Length = 254
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL- 61
T++G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+ L
Sbjct: 5 TLVGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQLR 64
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENN 120
L + + + D+L+ G R + + + + S + I P
Sbjct: 65 LAFVRAREVDRKNLSDLLEW----------GDRAKLDGLL--AFESMDVSGIHPFARRGL 112
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL + + +E+ + E+D +L G P GI+G+
Sbjct: 113 EL-----------LANGVSTAVLEDALQRELDAYERSRLAAVRVWQQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRL 237
+LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + ++ +L
Sbjct: 162 VLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSEMRFRKL 220
Query: 238 YI 239
Y+
Sbjct: 221 YL 222
>gi|116327382|ref|YP_797102.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332003|ref|YP_801721.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120126|gb|ABJ78169.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125692|gb|ABJ76963.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 244
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P +GI+G ++G++ + NL + LG I + T GI + L PL ++I+S
Sbjct: 151 PTVGIIGTVMGLVGVLENLGAGTRALGEGIATAFIATFYGITFANLLFFPLANRIRSWSK 210
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIE 259
+Q V + +IA +G ++ +E
Sbjct: 211 EQSDRRQAVIRGVIALQSGDNRRILME 237
>gi|298530632|ref|ZP_07018034.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510006|gb|EFI33910.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 253
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+ +M+ EI I + MG PA+G++G I+G++ + +L P +G A+
Sbjct: 123 IQEIMETEISHIEDRHQTGADILGAMGAFAPAMGMIGTIIGLVLMLQDLD-DPAAIGPAM 181
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
++L T G+IL+ L P++ ++K TR K+ I+VK+ ++
Sbjct: 182 AIALITTFYGVILANVLFVPMSGKLK-TRSKEE---ILVKEMML 221
>gi|42780819|ref|NP_978066.1| flagellar motor protein MotP [Bacillus cereus ATCC 10987]
gi|42736739|gb|AAS40674.1| chemotaxis protein MotA, putative [Bacillus cereus ATCC 10987]
Length = 277
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|206974871|ref|ZP_03235786.1| putative chemotaxis protein MotA [Bacillus cereus H3081.97]
gi|206746890|gb|EDZ58282.1| putative chemotaxis protein MotA [Bacillus cereus H3081.97]
Length = 277
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|217959211|ref|YP_002337759.1| flagellar motor protein MotP [Bacillus cereus AH187]
gi|222095351|ref|YP_002529411.1| flagellar motor protein motp [Bacillus cereus Q1]
gi|229195940|ref|ZP_04322693.1| Chemotaxis protein, MotA [Bacillus cereus m1293]
gi|217066753|gb|ACJ81003.1| putative chemotaxis protein MotA [Bacillus cereus AH187]
gi|221239409|gb|ACM12119.1| chemotaxis protein [Bacillus cereus Q1]
gi|228587499|gb|EEK45564.1| Chemotaxis protein, MotA [Bacillus cereus m1293]
Length = 277
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|218290400|ref|ZP_03494530.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
LAA1]
gi|218239528|gb|EED06722.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
LAA1]
Length = 265
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 30/252 (11%)
Query: 23 GNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLL 82
GN LIQP ++IV G LG ++++PLKV + + K L
Sbjct: 25 GNIAALIQPSAMMIVFGGTLGATMLSSPLKV---------------------FLSLPKYL 63
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE-NNELTTFICDYMR---MIIVGNA 138
I + K+ R + ID + + +L + + +F +MR +IV
Sbjct: 64 RIAFFAPKRDPRAQ----IDQLVDLAVMARREGILALEDHVNSFDDAFMRNGVRLIVDGI 119
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+++++ E+ I + G P +GI+G ++G++ +G+LS L
Sbjct: 120 DPELVKDMLQTELAHIEERHEVGINMFEAAGGFAPTMGIIGTVMGLVHVLGSLSNVSS-L 178
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I + TL G+ + P+ +++++ ++ + + +++ G P V
Sbjct: 179 GPEIATAFIATLYGVASANIFWLPVANKLRARSQEEMLEREMTLEGILSIQAGENPNVLR 238
Query: 259 EYGRKVLPLSER 270
+ L S+R
Sbjct: 239 QKLLSFLAASDR 250
>gi|54308003|ref|YP_129023.1| flagellar motor protein PomA [Photobacterium profundum SS9]
gi|46912429|emb|CAG19221.1| putative sodium-driven polar flagellar protein MotA [Photobacterium
profundum SS9]
Length = 253
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
S G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G IL+ + P+
Sbjct: 144 SSFGDVAPAMGMIGTLIGLVAMLSNM-DDPKSIGPAMAVALLTTLYGSILANMVAIPIAD 202
Query: 226 QIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ S R + +L ++ ++A +G P+V Y + L +R
Sbjct: 203 KL-SLRKNEEKLNRQLILDGVLAIQDGQNPRVIDGYLKNYLNEKKR 247
>gi|311696642|gb|ADP99515.1| MotA/TolQ/ExbB proton channel [marine bacterium HP15]
Length = 248
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+GES PAIG++G ++G+++ + L P +G A+ ++L TL G ++ + PL ++
Sbjct: 138 IGESAPAIGMLGTLVGLVQMLNTLD-DPSSIGPAMAIALLTTLYGAFIAQLVALPLADKL 196
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
+ + R +++ ++ M G P+V E
Sbjct: 197 QLKAEDEARNQVLIITSIKNIMRGENPRVMTE 228
>gi|167770208|ref|ZP_02442261.1| hypothetical protein ANACOL_01551 [Anaerotruncus colihominis DSM
17241]
gi|167667530|gb|EDS11660.1| hypothetical protein ANACOL_01551 [Anaerotruncus colihominis DSM
17241]
Length = 279
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M+IV +++ L++ E+D + + PA G++G ++G+I + +L
Sbjct: 127 MLIVDAVDPEKVKTLLETELDYLDERHAQDRAFYDKASAYAPAFGMIGTLMGLINLLKSL 186
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
P + A+ ++L T G ILS + P++++++ +++ +IV + + A G
Sbjct: 187 D-DPDAIAPAMALALVTTFYGTILSNLIFTPISNKLRVRHEEEYLCKMIVVEGVQAIQAG 245
Query: 252 AIPQVAIEYGRKVLP 266
P+ E +++P
Sbjct: 246 DNPKFIEEKLTQLIP 260
>gi|229138427|ref|ZP_04267016.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST26]
gi|228644964|gb|EEL01207.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST26]
Length = 240
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 95 FIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGL 153
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 154 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 195
>gi|324325746|gb|ADY21006.1| flagellar motor protein MotP [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 277
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+
Sbjct: 127 FIQKGIRLMLSGYDEE-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGL 185
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
I + NL + +I GT + V++ TL G +L+ + PL ++
Sbjct: 186 IIMLQNLQDTSQI-GTGMAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|294139894|ref|YP_003555872.1| chemotaxis pomA protein [Shewanella violacea DSS12]
gi|293326363|dbj|BAJ01094.1| chemotaxis pomA protein [Shewanella violacea DSS12]
Length = 255
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 117 LENNELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY--HAISHMGESLP 173
LE E+T TF+ + M++ G+ + L E DI L E+ + +G+ P
Sbjct: 95 LEEAEITNTFMQKAVDMLVDGHDGDVVRDAL---EKDIALTEERHKMGISIFTAIGDVAP 151
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A+G++G ++G++ + N+ PK +G A+ V+L TL G +++ + P+ ++ R+
Sbjct: 152 AMGMIGTLVGLVGMLSNMD-DPKSIGPAMAVALLTTLYGAMIANMVAIPIAGKL-GLRMA 209
Query: 234 QHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ L ++ A++A +G P+V + + L +R
Sbjct: 210 EEMLNRNLIMDAVLAIQDGQNPRVIEGFLKNYLSEKQR 247
>gi|163789639|ref|ZP_02184077.1| MotA/TolQ/ExbB proton channel [Carnobacterium sp. AT7]
gi|159875171|gb|EDP69237.1| MotA/TolQ/ExbB proton channel [Carnobacterium sp. AT7]
Length = 269
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 37/290 (12%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
IIGL + II + GN I +VI G +++ PLK IK
Sbjct: 8 IIGLILGFGLIIWSITS-SGNIASFIDTPSLVITLGGSFSAILISFPLKSIK-------- 58
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE--NNE 121
T +LK L +L N ET + S +I +E +NE
Sbjct: 59 ----------TLPSILKTL-VLDPNPNYNELIETFASLSRKARSQGILAIEEDIEQQDNE 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH-----MGESLPAIG 176
L + ++M++ G E E + D I I E ++ H++ GE PA G
Sbjct: 108 L---MVSGLQMVVDG----LEPETVRD--IMEITTENIEKRHSVGQDIFLKWGEMAPAYG 158
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++G ++G+I +G L P +G + +L T G L+ + P+ S +++ +++ +
Sbjct: 159 MIGTLIGLIIMLGELD-DPSTIGVGMATALITTFYGSFLANLVFIPIASNLQNQTIEEMK 217
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
++ + +++ G P+V + + LP + A ++ Q N
Sbjct: 218 FCEMIIEGVLSLQAGENPRVIEQKLKGYLPFENKEDAMKEAAKIQQEEEN 267
>gi|24216276|ref|NP_713757.1| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
gi|45656520|ref|YP_000606.1| motility protein A [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|24197542|gb|AAN50775.1| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
gi|45599755|gb|AAS69243.1| motility protein A [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 260
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 112/269 (41%), Gaps = 22/269 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++G + +I G + G +P + ++I G G +MA P + G
Sbjct: 5 TVVGFGGACVLMIFGIISAGLSPLDIFDIPSVIITFGGATAGTIMAVPWESTLAVGKITQ 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
++F + D+++L+ L+ + + +R E ++D N +P +
Sbjct: 65 KVF------KTEKHDLIELIKTLV-SFSEKARREGLLALEDDVNE-----LPDEFLRKGI 112
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
T ++V + N+M+ E+ I + G PA G++G ++
Sbjct: 113 T---------LVVDGTDPELVRNIMETEMGNIASRHNNGKAWWENWGALAPAFGMIGTLI 163
Query: 183 GIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
G+++ + NL S P +GT + +L TL G + + P+ ++ + + I+
Sbjct: 164 GLVQMLKNLGSGDPSAIGTGMAAALITTLYGSMGANMFAIPVMKKLIRKSEDELTIKQIM 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++ +G P++ + LP SER
Sbjct: 224 IEGTLSIQSGDNPRIVKDKLSSFLPPSER 252
>gi|317133448|ref|YP_004092762.1| MotA/TolQ/ExbB proton channel [Ethanoligenens harbinense YUAN-3]
gi|315471427|gb|ADU28031.1| MotA/TolQ/ExbB proton channel [Ethanoligenens harbinense YUAN-3]
Length = 266
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
IIGL + ++ GF GG L++ +IV G +G ++ P+ IK
Sbjct: 6 IIGLVVAFGGVLMGFTQEGGVLTNLLKLPAFMIVVGGTIGSAFISFPIANIK-------R 58
Query: 64 IFG-YKALGQDTYCDVLKLLYILMYNLKKGSRN-----ETE-NHIDDPYNSTIFTSIPTV 116
I G +K + D KL+ ++ K R+ E+E + I DP
Sbjct: 59 IPGAFKTMMFQKKHDYPKLIDMMCEIANKARRDGLLSLESEADKIKDP------------ 106
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
FI + I G + ++ L++ EI+ + MG + P +G
Sbjct: 107 --------FIKKGLGYIADGADPEF-LKQLLNNEIEANFKNVEDAAKVMEGMGGTSPTMG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++G ++G+ +G++ +GT I + T+ G+ + + PL +Q+K T + +
Sbjct: 158 VLGTVMGMTTVLGHMGSDTSKIGTEIAGAFIATMYGVGIGNLIWLPLGNQMKVTAMHEAE 217
Query: 237 LYIIVKKALIAYMNG 251
IV + L+A G
Sbjct: 218 HQEIVMEGLMAIQAG 232
>gi|83815022|ref|YP_446692.1| chemotaxis motA protein [Salinibacter ruber DSM 13855]
gi|294508628|ref|YP_003572687.1| chemotaxis motA protein [Salinibacter ruber M8]
gi|83756416|gb|ABC44529.1| chemotaxis motA protein [Salinibacter ruber DSM 13855]
gi|294344957|emb|CBH25735.1| Chemotaxis motA protein [Salinibacter ruber M8]
Length = 273
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 31/259 (11%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST IGL I+ +I G +G P +++V G V+ +K
Sbjct: 4 STSIGL-ISGFVLITGAILLGNTWGKFFDPASLLMVVGGTAAAVVVNYSFDDLKRVIEMT 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----ENHIDDPYNSTIFTSIPTVL 117
++F ++ D + N+ + +R E + HIDD
Sbjct: 63 QDLFAFEPPSLQRRLDQIT-------NMARTARREGVLALDRHIDDV------------- 102
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
++EL F + M + G EI ++D+ I + ++ + G PA G+
Sbjct: 103 -DDELLEF---GLEMAVDGMGED-EIAGMLDQRIAEMKGKRQLVADFFTQAGTYAPAFGM 157
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I+ + NL KI G+ + +L T G +L+ PL + + + +
Sbjct: 158 IGTLIGLIQMLNNLDDPSKI-GSGMATALVTTFYGALLANLAFLPLGDRARKQNELRGKA 216
Query: 238 YIIVKKALIAYMNGAIPQV 256
+ I ++ ++A G P++
Sbjct: 217 HYITREGILAIARGDSPRM 235
>gi|242280307|ref|YP_002992436.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242123201|gb|ACS80897.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 250
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ + + ++G + +GG + + ++IV G L +A P + + + ++
Sbjct: 4 STLIGMLVGLSLVVGAIF-IGGAVDVFVNVPGMMIVIGGTLASICVAFPFEEVLQAMLAG 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ F + + + ++ M + + SR E LEN +
Sbjct: 63 FKAFSSRKVKVNEVVNI-------MVKVAEISRREG----------------LIALENVQ 99
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH-----MGESLPAIG 176
+ +I NA I + EI +K H I+ + PA G
Sbjct: 100 TENVVLRKSCQLIADNADPELIRATLQIEIS-----AMKRRHKIAQDVYKRLAGLAPAFG 154
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
++G ++G+++ + NL Q P +G A+ V++ T G +L+ L P+ +++++ L++
Sbjct: 155 MLGTLIGLVQMLSNL-QDPASIGPAMAVAILTTFYGSLLATLLFIPIGAKLRARTLQEQ 212
>gi|260773299|ref|ZP_05882215.1| Flagellar motor rotation protein MotA [Vibrio metschnikovii CIP
69.14]
gi|260612438|gb|EEX37641.1| Flagellar motor rotation protein MotA [Vibrio metschnikovii CIP
69.14]
Length = 254
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G I++ + P+ ++
Sbjct: 147 GDVAPAMGMIGTLIGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAIMANMIFFPIADKLA 205
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEY-------GRKVLPLS 268
R ++ ++ ++A +G P+V Y G++VL +
Sbjct: 206 LRRGQETLNRRLIMDGVLAIQDGQNPRVIDGYLKNYLNEGKRVLDVD 252
>gi|148554193|ref|YP_001261775.1| MotA/TolQ/ExbB proton channel [Sphingomonas wittichii RW1]
gi|148499383|gb|ABQ67637.1| MotA/TolQ/ExbB proton channel [Sphingomonas wittichii RW1]
Length = 228
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ AI+ E+ PA+G++G I+G+++ ++ + P +G A+ V++ TL G+ILS ++
Sbjct: 125 WRAIA---ETAPAMGMIGTIIGLVQMFAHM-EDPAAIGPAMAVAMLTTLYGVILSSAVAG 180
Query: 222 PLTSQIKS 229
P+ ++++
Sbjct: 181 PIAGRLET 188
>gi|119775567|ref|YP_928307.1| flagellar motor protein PomA [Shewanella amazonensis SB2B]
gi|119768067|gb|ABM00638.1| MotA/TolQ/ExbB proton channel [Shewanella amazonensis SB2B]
Length = 255
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +L+ + P+ ++
Sbjct: 147 GDVAPAMGMIGTLIGLVAMLSNM-DDPKSIGPAMAVALLTTLYGAMLANMVAIPVADKL- 204
Query: 229 STRLKQHRL-YIIVKKALIAYMNGAIPQV 256
S R+ + L ++ A++A +G P+V
Sbjct: 205 SLRMSEEMLNRNLIMDAVLAIQDGQNPRV 233
>gi|95929858|ref|ZP_01312599.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134154|gb|EAT15812.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 255
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 110/259 (42%), Gaps = 31/259 (11%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLK-VIKDSGVS 60
STIIG +I GG+ + + P I+IVAG LG ++ P K V + V+
Sbjct: 4 STIIGAVAAFGLMIAAMMN-GGSILLFVDPASIMIVAGGTLGSTLIHYPFKEVFRAVSVA 62
Query: 61 LLEIFGY-KALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVL 117
+F +A G+ + +L+ K+G S + ++DP
Sbjct: 63 KKTLFHKDQAPGEI----ISQLIEYAGKARKEGILSLQSVMSQVEDP------------- 105
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F ++M + G + ++M+ E++ + + M PA+G+
Sbjct: 106 -------FFLKGLQMAVDGQ-EPEALRDMMERELEYVQERHETGADIFTTMAAYAPAMGM 157
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+++ + + P +G A+ V+L T G + + + P++ ++K +
Sbjct: 158 IGTLIGLVQMLQTMD-DPSSIGPAMAVALLTTFYGAVAANVIFTPMSGKLKHRSSSEMLC 216
Query: 238 YIIVKKALIAYMNGAIPQV 256
++ + + + + G P+V
Sbjct: 217 KTLISEGMNSILAGENPRV 235
>gi|258404711|ref|YP_003197453.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257796938|gb|ACV67875.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 261
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 119 NNELTTFICDYMRMIIVGNARSYE---IENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
N F+ ++M A YE + + +D EI+ I K S +G PA+
Sbjct: 103 NEASDNFLAKGLQMA----ADGYEPDVLRDTLDREIEYIEDRHEKGAEIFSSLGMYAPAM 158
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G+VG ++G+++ + L + P +G A+ ++L TL G +++ + P++ ++K+ +
Sbjct: 159 GMVGTLIGLVQMLQTL-EDPSTIGPAMAMALLTTLYGSVMANVIFIPMSGKLKNKSKAE- 216
Query: 236 RLYIIVKKALI 246
++KK+L+
Sbjct: 217 ----VLKKSLV 223
>gi|126173598|ref|YP_001049747.1| flagellar motor protein PomA [Shewanella baltica OS155]
gi|152999878|ref|YP_001365559.1| flagellar motor protein PomA [Shewanella baltica OS185]
gi|160874503|ref|YP_001553819.1| flagellar motor protein PomA [Shewanella baltica OS195]
gi|125996803|gb|ABN60878.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|151364496|gb|ABS07496.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|160860025|gb|ABX48559.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315266741|gb|ADT93594.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 255
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 150 EIDIILYEK-----LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E DI L E+ + + A +G PA+G++G ++G++ + N+S PK +G ++ V
Sbjct: 126 EKDIALTEERHRTGIGIFRAFGDVG---PAMGMIGTLVGLVAMLSNMSD-PKSIGPSMAV 181
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQV 256
+L TL G +++ +C P+ ++ + R+ + L ++ A++A +G P+V
Sbjct: 182 ALLTTLYGAMVANMVCLPIADKL-TLRMGEEMLNRNLIMDAVLAIQDGQNPRV 233
>gi|118589612|ref|ZP_01547017.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118437698|gb|EAV44334.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 240
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 33/174 (18%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPY-HAISHMGESLPAIGIVG 179
+ + D M ++ G+ARS +L+ E+++ I ++ L+ Y + + ++ P IG++G
Sbjct: 86 SVVADIMLKLVQGSARSDTRTDLLKEDVERICIQRINMLRAYLRPLDMIAQTAPLIGLLG 145
Query: 180 AILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS---YSLCNPLTSQIKSTR 231
+LG+I+A + + P +L I V+L T +G+ ++ ++ S+I++ +
Sbjct: 146 TVLGMIEAFQAMQGAGAAVDPSVLAGGIWVALLTTAVGLSVAIPVSAIVGWFDSRIEAEQ 205
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+ L + A+ GAI +ER + IVA E + H
Sbjct: 206 SEMEAL-------VTAFFTGAI--------------AERGAARIVALEASETRH 238
>gi|146296537|ref|YP_001180308.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145410113|gb|ABP67117.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 265
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 22/264 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I GL + ++ F GNP L+Q +IV G + +++ P+ IK + L
Sbjct: 5 SIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSEIKLAIKHLK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F K + + +++ L L +K E I + N + + V++ E
Sbjct: 65 MVFMDKKI---DFSGIVEQLVQLSDRARKEGLLALEQEIPNIQNPLLKKGLGLVVDGIEG 121
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
I +++D E+ + E G P +GI+G ++
Sbjct: 122 EV------------------IRDILDREVYLAENELRAAAEVFEAAGGYSPTMGIIGTVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I + N+S +P + AI V+ TL G+ + + +IK+ ++ L I+
Sbjct: 164 GLISVLSNIS-NPDEVAPAIAVAFVATLYGVSFANLVWLNFGKKIKTKAKQEKMLNEIIV 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVLP 266
+ L++ G P++ E +LP
Sbjct: 223 EGLLSIQAGENPRILREKIGGILP 246
>gi|217974158|ref|YP_002358909.1| flagellar motor protein PomA [Shewanella baltica OS223]
gi|304409469|ref|ZP_07391089.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307303827|ref|ZP_07583580.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|217499293|gb|ACK47486.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|304351987|gb|EFM16385.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306912725|gb|EFN43148.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 255
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 150 EIDIILYEK-----LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E DI L E+ + + A +G PA+G++G ++G++ + N+S PK +G ++ V
Sbjct: 126 EKDIALTEERHRTGIGIFRAFGDVG---PAMGMIGTLVGLVAMLSNMSD-PKSIGPSMAV 181
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQV 256
+L TL G +++ +C P+ ++ + R+ + L ++ A++A +G P+V
Sbjct: 182 ALLTTLYGAMVANMVCLPIADKL-TLRMGEEMLNRNLIMDAVLAIQDGQNPRV 233
>gi|213029647|ref|ZP_03344094.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 52
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 98 ENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
E I++P S IF S P +L + + FI DY+R+II GN ++EI
Sbjct: 7 ERDIENPKESEIFASYPRILADAVMLDFIVDYLRLIISGNMNTFEI 52
>gi|78063206|ref|YP_373114.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77971091|gb|ABB12470.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
Length = 254
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 29/242 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL- 61
T+ G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+ L
Sbjct: 5 TLAGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQLR 64
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENN 120
L + + + D+L+ G R + + + + S + I P
Sbjct: 65 LAFVRAREVDRKNLSDLLEW----------GDRAKLDGLL--AFESMDVSGIHPFARRGL 112
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL + + +E+ + E+D +L G P GI+G+
Sbjct: 113 EL-----------LANGVSTAVLEDALQRELDAYERSRLAAARVWQQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRL 237
+LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + L+ +L
Sbjct: 162 VLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFRKL 220
Query: 238 YI 239
Y+
Sbjct: 221 YL 222
>gi|89093919|ref|ZP_01166864.1| chemotaxis protein MotA [Oceanospirillum sp. MED92]
gi|89081805|gb|EAR61032.1| chemotaxis protein MotA [Oceanospirillum sp. MED92]
Length = 258
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M++ A I N + EID ++ M PA G++G ++G+I+ + L
Sbjct: 110 MLLAEAASEQVIRNTIQNEIDSLVARHHSVQDVFRKMAAYAPAFGMLGTLIGLIQMLSEL 169
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
+P+ +G A+ ++L T G +L+ + P+ ++KS L + I+++ I+ +
Sbjct: 170 D-NPETIGPAMAIALLTTFYGSLLATMVFLPIAGKLKSRTLLEVTNLEIIREGCISILTN 228
Query: 252 AIPQVAIEYGRKVLPLSERPSIEI 275
E +P ++R I++
Sbjct: 229 DHYMHVYEQLSSYIPAAQRKKIKV 252
>gi|15606306|ref|NP_213685.1| flagellar motor protein MotA [Aquifex aeolicus VF5]
gi|6225709|sp|O67122|MOTA_AQUAE RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|2983506|gb|AAC07083.1| flagellar motor protein MotA [Aquifex aeolicus VF5]
Length = 254
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 155 LYEKLKPYHAI-SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGI 213
L EK+ A+ + + PA G++G ++G+I+ + NL+ P LG + V+L TL G
Sbjct: 136 LDEKMSTEVAVWEKLADLFPAFGMIGTLIGLIQMLRNLN-DPSALGPGMAVALITTLYGA 194
Query: 214 ILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
IL+ + P+ +++K + + + I +A+ G P V
Sbjct: 195 ILANAFAIPVANKLKKAKDMEVLVKTIYIEAIEKIQKGENPNV 237
>gi|88799580|ref|ZP_01115156.1| Flagellar motor component [Reinekea sp. MED297]
gi|88777665|gb|EAR08864.1| Flagellar motor component [Reinekea sp. MED297]
Length = 250
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 117 LENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E ++ F+ +++++ G+ ++ L+++++ + +GE PA+
Sbjct: 95 LEGKETSSDFLSKGIQLLVDGHDPDV-VKALLNKDMRMTSDRHRDGKSFFDALGEVAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+ PK +G A+ V+L TL G L+ + P+ ++ + ++
Sbjct: 154 GMIGTLIGLVGMLANM-DDPKTIGPAMAVALLTTLYGSFLATVIAIPIGDKLNNRAKQEE 212
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + L+A G P++ + LP + R
Sbjct: 213 MVQKMCIDGLLAIQAGQNPRIIESMLKSYLPSNLR 247
>gi|117928059|ref|YP_872610.1| MotA/TolQ/ExbB proton channel [Acidothermus cellulolyticus 11B]
gi|117648522|gb|ABK52624.1| MotA/TolQ/ExbB proton channel [Acidothermus cellulolyticus 11B]
Length = 260
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 128 DYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
D++R + + E+ ++D EI E + MG P +GI+G ++ +
Sbjct: 106 DFLRKGLQLAIDGTDPEELREILDAEIVAKRTEYKQGAKLFLDMGGYSPTLGIIGTVVSL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI-KSTRLKQHRLYIIVKK 243
I + NLS SP+ LG I + TL G++L+ + PL+++I + L ++ +++ +
Sbjct: 166 IHVLANLS-SPESLGKLIASAFVATLWGVMLANIVWLPLSNKIGRLGELAVQQMELVI-E 223
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+++ G P++ + + +LP P E QE
Sbjct: 224 GVLSIQAGVNPRLIRQKLQSLLPAD--PKAEKAKQE 257
>gi|152975139|ref|YP_001374656.1| flagellar motor protein MotP [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152023891|gb|ABS21661.1| MotA/TolQ/ExbB proton channel [Bacillus cytotoxicus NVH 391-98]
Length = 277
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI +R+++ G E+ ++ ++I+ +YE K + +G+ PA G++G ++G
Sbjct: 126 AFIQKGIRLMLSGYDED-ELREILTKDIETEVYELKKGAILLDKIGDFAPAWGMIGTLIG 184
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+I + NL + +I GT + V++ TL G +++ + PL ++
Sbjct: 185 LIIMLQNLQDTSQI-GTGMAVAMLTTLYGSVIANMIMIPLAEKV 227
>gi|71279500|ref|YP_267836.1| flagellar motor protein PomA [Colwellia psychrerythraea 34H]
gi|71145240|gb|AAZ25713.1| sodium-driven polar flagellar protein [Colwellia psychrerythraea
34H]
Length = 254
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Query: 117 LENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+T F+ + M++ G+ + + ++I++ + + + PA+
Sbjct: 95 LEEAEITNPFMQKGVDMLVDGHDADV-VRATLQKDINLTTERHETGSDMMMALADVAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+ PK +G A+ V+L TL G L+ + P+ S++K ++
Sbjct: 154 GMIGTLIGLVAMLSNMD-DPKSIGPAMAVALLTTLYGAFLANVIAIPIASKLKLRMAEEK 212
Query: 236 RLYIIVKKALIAYMNGAIPQV 256
+V A++ +G P+V
Sbjct: 213 MNQELVLDAVLGIQDGQNPRV 233
>gi|323697840|ref|ZP_08109752.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323457772|gb|EGB13637.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 250
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M++V + + ++M+ E++ + + MG PA G++G ++G++ + NL
Sbjct: 110 MLVVDGSSEGLVRSVMEIELEFMKQRHRQGQAVFKGMGTMAPAFGMIGTLIGLVNMLSNL 169
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
S P +G A+ V+L T G I++ + P+ ++++ + I+ + + + G
Sbjct: 170 SD-PSSIGPAMAVALLTTFYGAIMANVMFLPMATKLEERSAEDVLFMQIMIEGVSSLQRG 228
Query: 252 AIPQVAIE 259
P V E
Sbjct: 229 DHPSVVKE 236
>gi|157376458|ref|YP_001475058.1| flagellar motor protein PomA [Shewanella sediminis HAW-EB3]
gi|157318832|gb|ABV37930.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 255
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLP 173
LE E+ +F+ + M++ G+ + L E DI L E+ +G+ P
Sbjct: 95 LEEAEIGNSFMQKAVDMLVDGHDGDVVRDAL---EKDIALTEERHKLGVSIFQALGDVAP 151
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A+G++G ++G++ + N+ PK +G A+ V+L TL G +++ + P+ +++ R+K
Sbjct: 152 AMGMIGTLIGLVAMLSNMD-DPKSIGPAMAVALLTTLYGAVVANMVAIPIAGKLE-LRMK 209
Query: 234 QHRL-YIIVKKALIAYMNGAIPQV 256
+ + ++ A++A +G P+V
Sbjct: 210 EEMMNRNLIMDAVLAIQDGQNPRV 233
>gi|170727810|ref|YP_001761836.1| flagellar motor protein PomA [Shewanella woodyi ATCC 51908]
gi|169813157|gb|ACA87741.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
Length = 255
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 117 LENNELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY--HAISHMGESLP 173
LE E+T +F+ + M++ G+ + L E DI L E+ S +G+ P
Sbjct: 95 LEEAEITNSFMQKAVDMLVDGHDGDVVRDAL---EKDIALTEQRHKLGISIFSTVGDVAP 151
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A+G++G ++G++ + N+ PK +G A+ ++L TL G +++ + P+ +++ R+
Sbjct: 152 AMGMIGTLVGLVGMLSNMD-DPKSIGPAMAIALLTTLYGAMVANMVAIPIAGKLE-LRMN 209
Query: 234 QHRL-YIIVKKALIAYMNGAIPQV 256
+ L ++ A++A +G P+V
Sbjct: 210 EEMLNRNLIMDAVLAIQDGQNPRV 233
>gi|325290745|ref|YP_004266926.1| MotA/TolQ/ExbB proton channel [Syntrophobotulus glycolicus DSM
8271]
gi|324966146|gb|ADY56925.1| MotA/TolQ/ExbB proton channel [Syntrophobotulus glycolicus DSM
8271]
Length = 259
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P +GI+G ++G+I+ +GNL+ P L +I + T TL G+ + + P+ +++KS
Sbjct: 154 PTMGIIGTVMGLIQVLGNLT-DPDSLSASIAAAFTATLYGVASANIMFLPIANKLKSKNK 212
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIE 259
+ ++ +I+ +G P + E
Sbjct: 213 SEVETMEMIMDGIISIQSGENPAILKE 239
>gi|229160691|ref|ZP_04288683.1| Chemotaxis protein, MotA [Bacillus cereus R309803]
gi|228622706|gb|EEK79540.1| Chemotaxis protein, MotA [Bacillus cereus R309803]
Length = 289
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + NL + +I GT
Sbjct: 155 ELKEVLMKDVETEVYELRKGATLLDKIGDFAPAWGMIGTLIGLIIMLQNLQDTSQI-GTG 213
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQI 227
+ V++ TL G +L+ + PL ++
Sbjct: 214 MAVAMLTTLYGSVLANMIAIPLAEKV 239
>gi|212636368|ref|YP_002312893.1| flagellar motor protein PomA [Shewanella piezotolerans WP3]
gi|212557852|gb|ACJ30306.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 255
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 117 LENNELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLP 173
LE E++ +F+ + M++ G+ + L E DI L E+ +G+ P
Sbjct: 95 LEEAEISNSFMQKAVDMLVDGHDGDVVRDAL---EKDIALTEQRHKTGVGIFKSIGDVAP 151
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A+G++G ++G++ + N+ PK +G A+ V+L TL G +++ + P+ ++ S R+
Sbjct: 152 AMGMIGTLIGLVGMLSNM-DDPKSIGPAMAVALLTTLYGAVVANMVAIPIADKL-SLRMG 209
Query: 234 QHRL-YIIVKKALIAYMNGAIPQV 256
+ L ++ A++A +G P+V
Sbjct: 210 EEMLNRNLIMDAVLAIQDGQNPRV 233
>gi|228984811|ref|ZP_04144983.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775009|gb|EEM23403.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 251
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + NL + +I GT
Sbjct: 117 ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQDTSQI-GTG 175
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQI 227
+ V++ TL G +L+ + PL ++
Sbjct: 176 MAVAMLTTLYGSVLANMIAIPLAEKV 201
>gi|90410907|ref|ZP_01218921.1| flagellar motor protein [Photobacterium profundum 3TCK]
gi|90328120|gb|EAS44431.1| flagellar motor protein [Photobacterium profundum 3TCK]
Length = 253
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
S G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G I++ + P+
Sbjct: 144 SSFGDVAPAMGMIGTLIGLVAMLSNM-DDPKSIGPAMAVALLTTLYGSIVANMVAIPIAD 202
Query: 226 QIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ S R + +L ++ ++A +G P+V Y + L +R
Sbjct: 203 KL-SLRKNEEKLNRRLILDGVLAIQDGQNPRVIDGYLKNYLNEKKR 247
>gi|47566110|ref|ZP_00237148.1| motility protein A [Bacillus cereus G9241]
gi|47557027|gb|EAL15357.1| motility protein A [Bacillus cereus G9241]
Length = 277
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + NL + +I GT
Sbjct: 143 ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQDTSQI-GTG 201
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQI 227
+ V++ TL G +L+ + PL ++
Sbjct: 202 MAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|229029407|ref|ZP_04185490.1| Chemotaxis protein, MotA [Bacillus cereus AH1271]
gi|228731866|gb|EEL82765.1| Chemotaxis protein, MotA [Bacillus cereus AH1271]
Length = 277
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + NL + +I GT
Sbjct: 143 ELKEVLMKDVETEVYELRKGATLLDKIGDFAPAWGMIGTLIGLIIMLQNLQDTSQI-GTG 201
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQI 227
+ V++ TL G +L+ + PL ++
Sbjct: 202 MAVAMLTTLYGSVLANMIAIPLAEKV 227
>gi|302389669|ref|YP_003825490.1| MotA/TolQ/ExbB proton channel [Thermosediminibacter oceani DSM
16646]
gi|302200297|gb|ADL07867.1| MotA/TolQ/ExbB proton channel [Thermosediminibacter oceani DSM
16646]
Length = 268
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 128 DYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIVGAILG 183
D+M+ M++V ++N+++ E+ L E+ K +I MG PA G++G I+G
Sbjct: 105 DFMKRGIMLVVDGTDPELVKNILETEL-AFLEERHKEGQSIFETMGALAPAYGLIGTIIG 163
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I+ M N P +G + V+L T G +L+ L P+ ++K R KQ I++K+
Sbjct: 164 LIQ-MLNKIDDPSAVGPGMAVALITTFYGAVLANFLFLPIAGKLK-VRSKQE---ILMKE 218
Query: 244 ALI 246
+I
Sbjct: 219 VII 221
>gi|28211322|ref|NP_782266.1| chemotaxis motA protein [Clostridium tetani E88]
gi|28203762|gb|AAO36203.1| chemotaxis motA protein [Clostridium tetani E88]
Length = 276
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 120 NELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+E++ D+++ ++V I+++MD EI + + + G PA G
Sbjct: 107 DEISGINDDFLKKGLQMVVDGIEPETIQDIMDLEIGEMERRHGEGVDMLKAWGAYAPAFG 166
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
+ G ++G+I+ +GNL++S +I + + +L TL G +++ + NP+ + + ++
Sbjct: 167 MAGTLIGLIQMLGNLNESGQI-ASGMSKALITTLYGSLMANIVFNPMAANLSLKSQQEIA 225
Query: 237 LYIIVKKALIAYMNGAIPQVAIE 259
+ ++ + ++A +G P++ E
Sbjct: 226 VREMMLEGILAIQSGVNPRIVEE 248
>gi|229155298|ref|ZP_04283409.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 4342]
gi|228628223|gb|EEK84939.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 4342]
Length = 245
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + NL + +I GT
Sbjct: 111 ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQDTSQI-GTG 169
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQI 227
+ V++ TL G +L+ + PL ++
Sbjct: 170 MAVAMLTTLYGSVLANMIAIPLAEKV 195
>gi|209964121|ref|YP_002297036.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
gi|7025358|gb|AAF35848.1|AF220003_2 polar flagellar motor protein MopA [Rhodospirillum centenum]
gi|209957587|gb|ACI98223.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
Length = 301
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 139 RSYE--IENLMDEEIDIILYEKLKPYHAISHMG--------ESLPAIGIVGAILGIIKAM 188
RS E ++ L ++++ IL +++ A + G E PA+G++G ++G+++ +
Sbjct: 156 RSIEMIVDGLPADDVERILRTEIEADQARARAGAAVLRRAAEVAPAMGLIGTLVGLVQML 215
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
NL Q P +G A+ V+L T G +L + +PL ++
Sbjct: 216 DNL-QDPASIGPAMAVALLTTFYGAVLGSMVLSPLAGKV 253
>gi|77361279|ref|YP_340854.1| flagellar motor protein PomA [Pseudoalteromonas haloplanktis
TAC125]
gi|76876190|emb|CAI87412.1| Flagellar motor component (Chemotaxis motA protein)
[Pseudoalteromonas haloplanktis TAC125]
Length = 228
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G L+ + P+ +++
Sbjct: 121 LGDIAPAMGMIGTLIGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAFLANVVAIPIQTKL 179
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+ + ++ ++ A++ +G P+V
Sbjct: 180 ELRKDEEAMNQRLILDAVLGIQDGQNPKV 208
>gi|317153139|ref|YP_004121187.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316943390|gb|ADU62441.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 290
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
E+ E+++F+ + + +++V N + EI ++ E+ + + M PA G+
Sbjct: 99 EHREISSFLQNGL-ILLVDNYKEEEIREALNSEMAFFNLRRQQSERFFQTMARMAPAFGV 157
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK-STRLK 233
G+++G+I + ++ + IL I V+ TL G++LS + +P+ I STR++
Sbjct: 158 AGSVIGLIGLLMGINDTAVILKN-IPVAFISTLYGLVLSNLVFSPIAENINYSTRVE 213
>gi|114565808|ref|YP_752962.1| hypothetical protein Swol_0239 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114336743|gb|ABI67591.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 263
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P +GI+G ++G+I + N+++ K+ G AI V+ TL G+ + + P ++IK
Sbjct: 154 PTMGIIGTVMGLIHVLSNIAEPDKLAG-AIAVAFLATLYGVASANVMWIPFGTKIKVKSG 212
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ L +V + +++ G P+V E LP R
Sbjct: 213 REILLMELVLEGILSIQAGENPRVIREKLMTFLPADAR 250
>gi|78356581|ref|YP_388030.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218986|gb|ABB38335.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 251
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 27/275 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ G+ ++G + MGGN + ++IV G ++ P + + +
Sbjct: 3 IATLFGIIAGFGLVVGAIF-MGGNFADFVNLPGLMIVFGGTGAAILVTFPFEEVVQAVKG 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++FG + + + M + + SR E T++ + N
Sbjct: 62 GLQVFGARNVKNRDVVNT-------MVRVAEISRREG------------LTALEHIKTEN 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L C +I NA I + + EI + + +G PA G++G
Sbjct: 103 SLLKKACQ----LIADNADHALIRDTVMIEIATMRRRHNVSIAVFNRLGAFAPAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH-RLYI 239
++G+++ + L+ P +G A+ V++ T G +++ L P+ ++K+ L++ L+I
Sbjct: 159 LIGLVQMLTRLN-DPAAIGPAMAVAILTTFYGALMANLLFLPIAGKLKARTLQEEVHLFI 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
I + A N P++ E L ER S+
Sbjct: 218 IFEGAKSILENNN-PRLVHEKLSSFLSPQERRSVR 251
>gi|170700357|ref|ZP_02891368.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|171318848|ref|ZP_02907984.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|170134744|gb|EDT03061.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|171095947|gb|EDT40883.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 254
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 33/244 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GG+ +L Q +VIV G LG ++ N
Sbjct: 5 TLAGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWA---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ D +K L + ++ R H+ D + +L +
Sbjct: 55 -----------RFFDAVKQLRLAFVRAQEVDRK----HLTDLLEWGDRAKLDGLLAFESM 99
Query: 123 -TTFICDYMRM---IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ I + R ++ + +E+ + E+D +L G P GI+
Sbjct: 100 DVSGIHPFARRGLELLANGVSTAVLEDALHRELDAYERSRLAAARVWQQAGGYAPTFGIL 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQH 235
G++LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + L+
Sbjct: 160 GSVLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFR 218
Query: 236 RLYI 239
+LY+
Sbjct: 219 KLYL 222
>gi|56384264|gb|AAV85782.1| MotA [Azospirillum brasilense]
Length = 288
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
+IE ++ E++ K+K + E PA+G++G ++G+++ +G+L+ P +G A
Sbjct: 145 DIERMLIGEVEASGAGKVKSAGVLRRASEVAPAMGLIGTLVGLVQMLGSLND-PSSIGPA 203
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKST 230
+ ++L T G +L PL ++++ T
Sbjct: 204 MALALLTTFYGAVLGNVALAPLAAKVERT 232
>gi|298529616|ref|ZP_07017019.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511052|gb|EFI34955.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 252
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+T G+ + IIG + +GG + ++IV G + + P+ I + +
Sbjct: 3 FATFFGIIVGFSLIIGAIF-IGGAVDTFVNVPGVMIVLGGTMAATSINFPVTDINKAFRA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
IF K++ T DV+ + + ++ EN + NST+ + + +N
Sbjct: 62 AFYIFAGKSV---TANDVVNTMVRIAEISRRDGLLALENIKTE--NSTLKKACQLIADNT 116
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-----SHMGESLPAI 175
+ T I +R+ IV L+ HA+ MG P+
Sbjct: 117 DPET-ISQTLRIEIVA----------------------LRNRHAVIQDVFKKMGTYAPSF 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+++ M + P +G A+ V++ T G +L+ L P+ ++KS R +Q
Sbjct: 154 GMIGTLIGLVQ-MLTMLDDPASIGPAMAVAILTTFYGALLATLLFLPIAGKLKS-RTQQE 211
Query: 236 RLYI-IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L++ I+ + + + P+V E +P +ER
Sbjct: 212 NLHLEIIFQGAQSILENNNPRVVYEKLSSFVPPAER 247
>gi|167624990|ref|YP_001675284.1| flagellar motor protein PomA [Shewanella halifaxensis HAW-EB4]
gi|167355012|gb|ABZ77625.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 255
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 117 LENNELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLP 173
LE E++ +F+ + M++ G+ + L E DI L E+ +G+ P
Sbjct: 95 LEEAEISNSFMQKAVDMLVDGHDGDVVRDAL---EKDIALTEERHKTGIGIFKSIGDVAP 151
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A+G++G ++G++ + N+ PK +G A+ V+L TL G +++ + P+ ++ S R+
Sbjct: 152 AMGMIGTLIGLVGMLSNM-DDPKSIGPAMAVALLTTLYGAVVANMVALPIADKL-SLRMN 209
Query: 234 QHRL-YIIVKKALIAYMNGAIPQV 256
+ L ++ A++A +G P+V
Sbjct: 210 EEMLNRNLIMDAVLAIQDGQNPRV 233
>gi|325523699|gb|EGD01965.1| chemotaxis MotA protein [Burkholderia sp. TJI49]
Length = 254
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 27/241 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GG+ L Q VIV G LG ++ N D+ L
Sbjct: 5 TLAGVVLGGAAIVFGFSLEGGHLATLFQLEAFVIVLGGTLGAVMIQNTWARFFDAVKQLR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENNE 121
F A + L L+ G R + + + + S + I P E
Sbjct: 65 LAFVRAAEVDRKHLSAL---------LEWGDRAKLDGLL--AFESMDVSGIHPFARRGIE 113
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L + + M + IE+ + E+D L G P GI+G++
Sbjct: 114 L---LANGMSTAV--------IEDALQRELDAYERSHLAAARVWQQAGGYAPTFGILGSV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRLY 238
LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + L+ +LY
Sbjct: 163 LGLVQVTSHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAQLDSELRFRKLY 221
Query: 239 I 239
+
Sbjct: 222 L 222
>gi|157962806|ref|YP_001502840.1| flagellar motor protein PomA [Shewanella pealeana ATCC 700345]
gi|157847806|gb|ABV88305.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 255
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 117 LENNELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E++ +F+ + M++ G+ + + ++++I + +G+ PA+
Sbjct: 95 LEEAEISNSFMQKAVDMLVDGHDGDV-VRDALEKDIALTEERHRTGIGIFKSIGDVAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+ PK +G A+ V+L TL G +++ + P+ ++ S R+ +
Sbjct: 154 GMIGTLIGLVGMLSNM-DDPKSIGPAMAVALLTTLYGAVVANMVALPIADKL-SLRMNEE 211
Query: 236 RL-YIIVKKALIAYMNGAIPQV 256
L ++ A++A +G P+V
Sbjct: 212 MLNRNLIMDAVLAIQDGQNPRV 233
>gi|197337539|ref|YP_002157777.1| chemotaxis MotA protein [Vibrio fischeri MJ11]
gi|197314791|gb|ACH64240.1| chemotaxis MotA protein [Vibrio fischeri MJ11]
Length = 260
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E++ L+DE +++ ++ MG P G++G ++G+I + NL+ LG
Sbjct: 129 ELKKLLDESNHSQYKQEMTQAEVLNSMGTYAPGFGMIGTLIGLIIMLDNLNGDMAALGNG 188
Query: 202 IGVSLTGTLLGIILSYSLCNP 222
+ V+L TL GI+L+ P
Sbjct: 189 LAVALLTTLYGILLAQVFFKP 209
>gi|115360212|ref|YP_777350.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|115285500|gb|ABI91016.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
Length = 254
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 33/244 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GG+ +L Q +VIV G LG ++ N
Sbjct: 5 TLAGVILGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWA---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ D +K L + ++ R H+ D + +L +
Sbjct: 55 -----------RFFDAVKQLRLAFVRAQEVDRK----HLTDLLEWGDRAKLDGLLAFESM 99
Query: 123 -TTFICDYMRM---IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ I + R ++ + +E+ + E+D +L G P GI+
Sbjct: 100 DVSGIHPFARRGLELLANGVSTAVLEDALHRELDAYERSRLAAARVWHQAGGYAPTFGIL 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQH 235
G++LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + L+
Sbjct: 160 GSVLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFR 218
Query: 236 RLYI 239
+LY+
Sbjct: 219 KLYL 222
>gi|59713369|ref|YP_206144.1| flagellar motor protein MotA2 [Vibrio fischeri ES114]
gi|59481617|gb|AAW87256.1| flagellar motor protein MotA2 [Vibrio fischeri ES114]
Length = 260
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E++ L+DE +++ ++ MG P G++G ++G+I + NL+ LG
Sbjct: 129 ELKKLLDESNHSQYKQEMTQAEVLNSMGTYAPGFGMIGTLIGLIIMLDNLNGDMAALGNG 188
Query: 202 IGVSLTGTLLGIILSYSLCNP 222
+ V+L TL GI+L+ P
Sbjct: 189 LAVALLTTLYGILLAQVFFKP 209
>gi|119094109|gb|ABL60939.1| flagellar motor protein MotA [uncultured marine bacterium
HF10_19P19]
Length = 253
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ F ++M++ G A ++ +++EI + +A+ + PA+
Sbjct: 95 LEGQEVPDKFFQKGLQMLVDG-ADEAKLVTQLNKEIKAMKNRHEVNQNAVKAWIDIAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
G+VG ++G++ +GN+S PK +G A+ V+L T+ G I++ L PL ++++
Sbjct: 154 GMVGTLIGLVLMLGNMS-DPKAIGPAMAVALLTTMYGAIIANVLFLPLLNKLEK 206
>gi|294084382|ref|YP_003551140.1| MotA/TolQ/ExbB proton channel [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663955|gb|ADE39056.1| MotA/TolQ/ExbB proton channel [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 254
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ F M+M++ G A ++ +++EI + + + + PA+
Sbjct: 95 LEGQEVPDKFFSKGMQMLVDG-ADETKLTAQLNQEIKAMKMRHESNQNVVKAWIDIAPAM 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G++G ++G++ +GN++ PK +G A+ V+L TL G ++ L P+ ++++
Sbjct: 154 GMIGTLVGLVLMLGNMA-DPKAIGPAMAVALLTTLYGAFIANVLFAPMLTKLE 205
>gi|85711189|ref|ZP_01042249.1| flagellar motor protein [Idiomarina baltica OS145]
gi|85695102|gb|EAQ33040.1| flagellar motor protein [Idiomarina baltica OS145]
Length = 255
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 120/272 (44%), Gaps = 29/272 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMAN-PLKVIKDSGV 59
++T++G+ I ++ +GG+P + I ++IV G L VMAN PL+ +G
Sbjct: 3 IATLVGIIGAIGFVVAAMI-LGGDPGLFIDTQSLLIVVGGSLF-IVMANFPLQQFFATGK 60
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+++ F +K D + + K G E I +P
Sbjct: 61 VVVKAFFFKIEHPQELID--SAVEMADSARKGGFLALEEAEIPNP--------------- 103
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F + M++ G+ +++ + ++I + + + + PA+G++G
Sbjct: 104 -----FFRKGVDMLVDGHDAEV-VKHTLSKDISMSFTRHEEGARFFKILADVAPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL-Y 238
++G++ + N+ PK +G A+ V+L TL G L+ + P+ +++ R +Q +L
Sbjct: 158 TLIGLVAMLANMD-DPKAIGPAMSVALLTTLYGAFLANVIAIPIANKL-VLRAEQEKLNR 215
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ A++ +G P+V R L S+R
Sbjct: 216 QLILDAILGIQDGQNPRVIEGLLRNYLAESKR 247
>gi|83591880|ref|YP_425632.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83574794|gb|ABC21345.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 272
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
+LE+ F+ M +++ G ++E ++ ++I + + E PA+
Sbjct: 115 ILESLRDEPFLHKGMGLVVDGLPEP-DVEAILAQDIHATQQRLARATSVLRRAAEVAPAM 173
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ- 234
G++G ++G+++ +GNL+ +P ++G ++ V+L T G I+ + PL +++
Sbjct: 174 GLIGTLIGLVQMLGNLN-NPAVIGPSMAVALLTTFYGAIMGNVVFLPLAGKLERNGADDT 232
Query: 235 --HRLYII 240
R+Y++
Sbjct: 233 LVRRIYLV 240
>gi|172062648|ref|YP_001810299.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
gi|171995165|gb|ACB66083.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
Length = 254
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 97/244 (39%), Gaps = 33/244 (13%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ + I+ GF GG +L Q +VIV G LG ++ N
Sbjct: 5 TLAGVVLGGAAIVFGFALEGGRFSMLFQFEALVIVLGGTLGAVMIQNTWA---------- 54
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ D +K L + ++ R H+ D + +L +
Sbjct: 55 -----------RFFDAVKQLRLAFVRAQEVDRK----HLTDLLEWGDRAKLDGLLAFESM 99
Query: 123 -TTFICDYMRM---IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ I + R ++ + +E+ + E+D +L G P GI+
Sbjct: 100 DVSGIHPFARRGLELLANGVSTAVLEDALHRELDAYERSRLAAARVWHQAGGYAPTFGIL 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQH 235
G++LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + L+
Sbjct: 160 GSVLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFR 218
Query: 236 RLYI 239
+LY+
Sbjct: 219 KLYL 222
>gi|218133671|ref|ZP_03462475.1| hypothetical protein BACPEC_01540 [Bacteroides pectinophilus ATCC
43243]
gi|217991046|gb|EEC57052.1| hypothetical protein BACPEC_01540 [Bacteroides pectinophilus ATCC
43243]
Length = 269
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 162 YHAISHMGESLPAIGIVGAILGII---KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYS 218
+ I+ MG PA G++G ++G+I KAMG+ + +G + +L TL G +++
Sbjct: 149 WDTIASMG---PAWGMIGTLIGLINMLKAMGDDMSA---IGPNMATALITTLYGSVIANW 202
Query: 219 LCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ P ++++K K+++ +V + L++ G P+V E + L ++R I
Sbjct: 203 IAIPTSNKLKDISAKEYQSRALVVEGLLSIQAGENPRVIEEKLKSFLSPADREGI 257
>gi|78358628|ref|YP_390077.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78221033|gb|ABB40382.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 254
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+ +++ EI + I+ MG PA+G++G ++G+++ + +S P +G A+
Sbjct: 123 IQEILETEISSLESRHETGVEIINAMGAYAPALGMIGTVIGLVQMLQTMS-DPSSIGPAM 181
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+L T G +L+ + P+ ++K ++ + + + ++A G P++ E
Sbjct: 182 AVALITTFYGAVLANLVFIPMAGKLKMRSREEVTMREMQMEGILAISRGENPRIIQEKLS 241
Query: 263 KVLPLSER 270
P ER
Sbjct: 242 SYQPPKER 249
>gi|152980181|ref|YP_001353772.1| MotA chemotaxis protein [Janthinobacterium sp. Marseille]
gi|151280258|gb|ABR88668.1| MotA chemotaxis protein [Janthinobacterium sp. Marseille]
Length = 246
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 30/206 (14%)
Query: 28 LIQPFEIVIVAGAGLGGFVMA----NPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLY 83
L+QP +IV +G ++ N ++ +K SG ++F K +D Y ++K +
Sbjct: 30 LVQPAAFIIVVVGTIGAVLLQSGWRNFVQGLKMSG----QVFMPK---EDDYPALIKDIT 82
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
++ E I D + FI +R+I+ G ++
Sbjct: 83 AWSVIARREGLLSLERVIKDIQDP-----------------FIAHGLRLIVDG-VDPTKL 124
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
+++D EI + G P IGI+GA+LG+I M NLS P LG+ I
Sbjct: 125 RDVLDLEIGAYETRQRLSIKIWEAAGGYAPTIGILGAVLGLIHVMENLS-DPSRLGSGIA 183
Query: 204 VSLTGTLLGIILSYSLCNPLTSQIKS 229
V+ T+ G+ + + P++S++K+
Sbjct: 184 VAFVATIYGVGFANLIFLPISSKLKA 209
>gi|256830738|ref|YP_003159466.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
gi|256579914|gb|ACU91050.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
Length = 285
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 115 TVLENNELTTFICDYMRM---IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES 171
T++E+ T+ + ++R +V N + ++++ E+ + + + M +
Sbjct: 94 TLVEDERETSIL--FLRRALGFVVDNYSREQTTDILNTEMYFFKQRRDESERVLRVMADI 151
Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
PAIG+ G+++G+I + ++ + +L T I ++LT TL G+IL+ + PL ++I+
Sbjct: 152 CPAIGLAGSVVGLIGMLSGVNDTGVVLAT-IPIALTSTLYGVILANFVFLPLAARIR 207
>gi|167588460|ref|ZP_02380848.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 254
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 27/241 (11%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ I+ GF GG+ L Q VIV G LG ++ N D+ V L
Sbjct: 5 TLFGVVFGGAAIVFGFSLEGGHFATLFQLEAFVIVLGGTLGAVMIQNTWARFFDA-VKQL 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENNE 121
+ A Q D L +L + G R + + + S + I P E
Sbjct: 64 RL----AFVQARQVDRQSLTDLLEW----GDRAKLNGLL--AFESMDVSGIHPFARRGLE 113
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L + + +E+ + E+D + G P GI+G++
Sbjct: 114 L-----------LANGVSTAVLEDALQRELDAYERSHMAAARVWQQAGGYAPTFGILGSV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRLY 238
+G+I+ ++ + P LG I V+ TL G+ L+ + PL ++++ + L+ +LY
Sbjct: 163 MGLIQVTSHILE-PAQLGPGIAVAFVATLYGLALANLVFLPLYGKLRAQVDSELRFRKLY 221
Query: 239 I 239
+
Sbjct: 222 L 222
>gi|291286230|ref|YP_003503046.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290883390|gb|ADD67090.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 254
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
E+ F+ +R+ + G I+N+++ E++ ++ + M PA+G+
Sbjct: 99 EDEVKDEFLKKGIRLAVDGTEPEV-IKNILETELEYMVSRHKLGASVLGCMEAFGPAMGM 157
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G++ AM + P +G A+ V+L T+ G +L+ P +I+ ++ L
Sbjct: 158 IGTLIGLV-AMLQSMEDPSTIGPAMAVALLTTMYGAMLANLFAGPFRIKIEVRSGQEQLL 216
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
I+ ++A G P++ + LP S+R S
Sbjct: 217 REIMIGGIMAIQAGDNPRIVEQKLNAYLPPSQRKS 251
>gi|239787604|emb|CAX84072.1| MotA/TolQ/ExbB proton channel protein [uncultured bacterium]
Length = 250
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAI---SHMGESLPAIGIVGAILGIIKAMGNL 191
V A +E L+ +E+ Y+K + + + + ES PA G++G ++G+++ + ++
Sbjct: 113 VDGADPAFLEKLLAKELS---YQKDRHRNGVGIFEGIAESAPAFGLLGTLIGLVQMLVHM 169
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
P +G + ++L T GI ++ + P++ ++ + ++ + ++ +I G
Sbjct: 170 D-DPATIGPGLAMALVSTFYGIFIANMVAIPISYKLMAYSKEEQMVRQVIIDGMIGIQKG 228
Query: 252 AIPQVAIEYGRKVLPLSER 270
P++ +E VLP S R
Sbjct: 229 VNPRMLLESLIAVLPPSGR 247
>gi|288960026|ref|YP_003450366.1| chemotaxis protein [Azospirillum sp. B510]
gi|288912334|dbj|BAI73822.1| chemotaxis protein [Azospirillum sp. B510]
Length = 311
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
IE ++ E++ K + E PA+G++G ++G+++ +G+LS P +G A+
Sbjct: 172 IERMLTGEVEATAGGHGKSAGVLRRASEVAPAMGLIGTLVGLVQMLGSLSD-PSAIGPAM 230
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIK 228
++L T G +L + +PL ++++
Sbjct: 231 ALALLTTFYGAVLGNVVLSPLAAKVE 256
>gi|187918155|ref|YP_001883718.1| chemotaxis MotA protein [Borrelia hermsii DAH]
gi|119861003|gb|AAX16798.1| chemotaxis MotA protein [Borrelia hermsii DAH]
Length = 261
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL--------PAIG 176
F MR+++ G E I +LY +L +G L PA G
Sbjct: 107 FFKSGMRLVVDGTD---------PEIIRTMLYLELDQMQERHKIGADLFGTWAKLAPAFG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
+ G ++G+I +GNL + LG+++ V+L TL G I++ + P+ +++S L++
Sbjct: 158 MTGTLIGLIALLGNL-EDRSALGSSMAVALITTLYGTIMANLMLFPIQIKLESIDLEEAS 216
Query: 237 LYIIVKKALIAYMNGAIPQV 256
+ ++ + +++ G P++
Sbjct: 217 VRTMIVEGILSIQAGDNPRI 236
>gi|153956380|ref|YP_001397145.1| hypothetical protein CKL_3789 [Clostridium kluyveri DSM 555]
gi|219856693|ref|YP_002473815.1| hypothetical protein CKR_3350 [Clostridium kluyveri NBRC 12016]
gi|146349238|gb|EDK35774.1| MotA [Clostridium kluyveri DSM 555]
gi|219570417|dbj|BAH08401.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 264
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S I+ L +L + GGF GG+ L+ P +IV G +G ++ PL ++K
Sbjct: 3 ISVILFLIFGLLALGGGFILDGGHLSALLGPTAAMIVFGGTIGAVGVSFPLDLLKRI-PK 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++++ + ++ + Y +K E I N
Sbjct: 62 MVKVMISPP--KTELPSLISYFKDVSYRTRKNGLLSLEGEISSDPN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI +++++ G + ++++ E++ + G P +GIVG
Sbjct: 106 -LDPFIKKGLQLVVDG-VDPQAVRSILELELESTSERHRQGAAVFQSAGGYSPTMGIVGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + P LG I V+ TL GI + + P+ +++ K+ + +
Sbjct: 164 VMGLVHVLGNL-EDPSTLGPKIAVAFLATLYGIGAANLIWLPIANRLNVLDDKEVKEKTL 222
Query: 241 VKKALIAYMNGAIPQVAIE 259
+ + ++ G P E
Sbjct: 223 IVEGILYIQEGINPNTIAE 241
>gi|313681735|ref|YP_004059473.1| mota/tolq/exbb proton channel [Sulfuricurvum kujiense DSM 16994]
gi|313154595|gb|ADR33273.1| MotA/TolQ/ExbB proton channel [Sulfuricurvum kujiense DSM 16994]
Length = 256
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 118/264 (44%), Gaps = 40/264 (15%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ ++G+ I I G GGNP ++ ++I+ L +++ + +K + +
Sbjct: 3 LTVVLGILGAIASISIGDLMEGGNPVHVVHITSLIIIMPTTLLAAMVSTDAEHVKGAYKA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
+ IF K D + + +++ + + G S +D
Sbjct: 63 VPIIF--KKSQVDLHARIKQIIELSTMARRDGLLSLEAKVAQLD---------------- 104
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH----MGESLPA 174
+ F+ + M + GN E++ ++ E +++++ E YH +H GE+ P
Sbjct: 105 ----SEFLKQGLSMAVDGN----EVDTIV-ETMELVIEETEHYYHGCAHYWIIAGETSPV 155
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR--- 231
+G+VGA+LG+I A+ L +P + I + T T+ GI +Y L P+ +++
Sbjct: 156 LGLVGAVLGLILALQKLD-NPAEMAAGIAGAFTATVTGIFSAYVLFGPMGNKLAKKAHHI 214
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQ 255
+K+ +L + + +I ++G P+
Sbjct: 215 VKEQKLML---EGIIGIVHGDNPR 235
>gi|209516112|ref|ZP_03264971.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209503396|gb|EEA03393.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 254
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 93/240 (38%), Gaps = 25/240 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ G+ I+ GF GG+ L Q VIV G LG ++ N D+ L
Sbjct: 5 TLFGVLFGGAAIVFGFALEGGHFLTLFQYEAFVIVLGGTLGAVMIQNTWARFFDA----L 60
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
++ G A + D L +L + + D F L N L
Sbjct: 61 KLLGL-AFTRARQVDQKSLADLLEWGDQAKLNGLLAFESMDASGIHPFAKRGLELLANGL 119
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
+T + +E+ + E+D + G P GI+G++L
Sbjct: 120 STAV----------------LEDALQRELDAYARNHMAAARVWQQAGGYAPTFGILGSVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS---TRLKQHRLYI 239
G+I+ ++ P LG+ I + TL G+ L+ + PL ++++ + ++ RLY+
Sbjct: 164 GLIQVTNHI-LDPAQLGSGIATAFVATLYGLALANLVFLPLYGKLQAQVDSEVRFRRLYL 222
>gi|325109022|ref|YP_004270090.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324969290|gb|ADY60068.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 258
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
+E ++ E++ + + +G PA G++G ++G+I +GN+ P +G +
Sbjct: 125 MEAVLRSEMEAVSSRHKTGKSLMETVGRYAPAFGMIGTLMGLIIMLGNMDD-PAAIGPGM 183
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+L TL G ++S + P ++ ++ + ++ + +++ +G P+V +
Sbjct: 184 AVALITTLYGAMVSNIVFLPFADKLGFYSKRELEVREVIVRGILSIQDGDNPRVLEQKLN 243
Query: 263 KVLPLSER 270
LP+++R
Sbjct: 244 TFLPVAQR 251
>gi|317129963|ref|YP_004096245.1| MotA/TolQ/ExbB proton channel [Bacillus cellulosilyticus DSM 2522]
gi|315474911|gb|ADU31514.1| MotA/TolQ/ExbB proton channel [Bacillus cellulosilyticus DSM 2522]
Length = 270
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+++M E+ + K I GE PA G++G ++G++ + NL+ P LG +
Sbjct: 130 IKDIMMAEVVAMEERHRKGRSIIEKAGEYAPAWGMIGTLIGLVLMLQNLN-DPSSLGPNM 188
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+L TL G +L+ + P+ S++ + ++ + IV + +I +G P++ E
Sbjct: 189 AVALLTTLYGSLLANLVFIPMASKLALSTEEEVFIKQIVIEGVIGVQSGQNPKILQEKLS 248
Query: 263 KVLP 266
LP
Sbjct: 249 AFLP 252
>gi|83589324|ref|YP_429333.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
gi|83572238|gb|ABC18790.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
Length = 277
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 119 NNELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGES 171
EL D++R ++V + N++++ I Y + +H+ G
Sbjct: 99 EKELDGVKDDFLRTALQLVVDGTDPEQTRNVLEQYI----YATSERHHSGISLFEAAGGY 154
Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
P +GI+G ++G++ + NLS +P LG +I ++ TL G+ + L P+ +++K+
Sbjct: 155 APTMGIIGTVMGLVHVLSNLS-TPDKLGPSIAMAFIATLYGVSSANLLWLPIATKLKNKD 213
Query: 232 LKQHRLYIIVKKALIAYMNGAIP 254
++ ++ + ++A G P
Sbjct: 214 ARERLYQEMILEGVLALQAGKNP 236
>gi|255022044|ref|ZP_05294050.1| Flagellar motor component [Acidithiobacillus caldus ATCC 51756]
gi|254968530|gb|EET26086.1| Flagellar motor component [Acidithiobacillus caldus ATCC 51756]
Length = 227
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 125 FICDYMRMIIVGNA-----RSYEIENLMDEEIDII---LYEKLKPYHAISHMGESLPAIG 176
F+ + +RM + G R+ + E+D++ L+E Y P G
Sbjct: 71 FMRNGLRMAVDGTGTTTIMRTLRLRLHTQTELDMMAAGLFEAAGGY---------APTFG 121
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
I+GA+ G+I+ M +LS P LG I + T+ G++L+ C P +++++ +Q
Sbjct: 122 IMGAVTGLIEVMHHLSH-PSELGMGIAAAFVSTVYGLVLANVFCIPTANRLRTVIAEQ 178
>gi|91793919|ref|YP_563570.1| flagellar motor protein PomA [Shewanella denitrificans OS217]
gi|91715921|gb|ABE55847.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 255
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 150 EIDIILYEKLKPYHAIS---HMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
E DI L E+ + IS G+ PA+G++G ++G++ + N+ PK +G ++ V+L
Sbjct: 126 EKDIALTEE-RHKTGISIFRAFGDVAPAMGMIGTLVGLVAMLSNM-DDPKSIGPSMAVAL 183
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQV 256
TL G +++ + P+ ++ S R+ + L ++ A++A +G P+V
Sbjct: 184 LTTLYGAMIANMVAIPMADKL-SLRMAEEMLNRNLIMDAVLAIQDGQNPRV 233
>gi|150390476|ref|YP_001320525.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
gi|149950338|gb|ABR48866.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
Length = 262
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 128 DYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
D+++ M+IV + NL++ E+ I + MG PA G+VG ++G+
Sbjct: 105 DFLQKGVMLIVDGTDPELVRNLLETELAFIEERHQGGQGLLEMMGALAPAFGMVGTLIGL 164
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK-STRLKQHRLYIIVKK 243
I + +L P +G + V+L T G +++ + PL +++K +R + R I+V +
Sbjct: 165 INLLRDLD-DPASIGPNMSVALLTTFYGALMANLIFIPLANKLKLRSREEILRKEIMV-E 222
Query: 244 ALIAYMNGAIPQVAIEYGRKVLP 266
L++ G P++ E + LP
Sbjct: 223 GLLSIQAGENPRIIEEKLKAFLP 245
>gi|147678454|ref|YP_001212669.1| flagellar motor component [Pelotomaculum thermopropionicum SI]
gi|146274551|dbj|BAF60300.1| flagellar motor component [Pelotomaculum thermopropionicum SI]
Length = 262
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 108/244 (44%), Gaps = 42/244 (17%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMA---NPLKVIKDS 57
+++++GL I ++ ++ F GG+ L++P +IV G +G +++ N L +
Sbjct: 3 LTSLVGLAIAVVSLVAAFVLDGGHIMALLKPTAALIVFGGTIGATIVSFSFNELAAVP-- 60
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
L ++ ++ L + L + L R E +++
Sbjct: 61 --RLFKVILFQKLPDEVA------LIEQIVGLADKVRREGLLYLE--------------- 97
Query: 118 ENNELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL-- 172
N+L +MR ++V + +M+ E +Y + +H+ + + E+
Sbjct: 98 --NQLPQIGDAFMRKGIQLVVDGTDPELVRRIMETE----MYAIQERHHSSASIFEAAGG 151
Query: 173 --PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
P +GI+G ++G++ + NL +SP+ LG +I ++ TL G+ + P+ ++K+
Sbjct: 152 YAPTMGILGTVMGLVHVLSNL-ESPETLGPSIALAFIATLYGVGSANVFWLPIADKLKNM 210
Query: 231 RLKQ 234
K+
Sbjct: 211 SKKE 214
>gi|84514794|ref|ZP_01002157.1| Flagellar motor protein MotA [Loktanella vestfoldensis SKA53]
gi|84510953|gb|EAQ07407.1| Flagellar motor protein MotA [Loktanella vestfoldensis SKA53]
Length = 239
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA+G++G ++G++ +GN+S PK +G A+ V+L T+ G I++ L PL T+L
Sbjct: 137 PAMGMIGTLIGLVLMLGNMS-DPKAIGPAMAVALLTTMYGAIVANVLFGPLL-----TKL 190
Query: 233 KQHRLYIIVKKALI 246
+ + Y ++ + ++
Sbjct: 191 EGYTAYEVIYREMV 204
>gi|56461235|ref|YP_156516.1| flagellar motor protein PomA [Idiomarina loihiensis L2TR]
gi|56180245|gb|AAV82967.1| Flagellar motor component [Idiomarina loihiensis L2TR]
Length = 255
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ--IKST 230
PA+G++G ++G++ + N+ PK +G A+ V+L TL G L+ + P+ ++ +++
Sbjct: 151 PAMGMIGTLIGLVAMLSNMD-DPKAIGPAMAVALLTTLYGAFLANVIAIPIANKLLLRAE 209
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ K +R I+ A++ +G P+V R L S+R
Sbjct: 210 QEKLNRQLIL--DAILGIQDGQNPRVIEGILRNYLAESKR 247
>gi|160901601|ref|YP_001567182.1| MotA/TolQ/ExbB proton channel [Petrotoga mobilis SJ95]
gi|160359245|gb|ABX30859.1| MotA/TolQ/ExbB proton channel [Petrotoga mobilis SJ95]
Length = 259
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 35/264 (13%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPY---ILIQPFEIVIVA--GAGLGGFVMANPLKVIK 55
+STIIGL + I I+ G G+ + I I F I +V GA +N K+
Sbjct: 3 ISTIIGLALAIAAIVVG----AGSEFTTLIDIPSFFITVVGSVGATFIAHPSSNSFKMFN 58
Query: 56 DSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT 115
+LE F ++ D L+ L L Y+ + +R + +++ IP+
Sbjct: 59 ----MILEAF------KNPKIDNLETLRTL-YSFSEKARRDGMISLEE--------DIPS 99
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
V + F+ D +R + G EI+ +++ ++D+ + + G PA
Sbjct: 100 VKSD-----FLRDGLRAAVDGT-DPEEIKKILEVKMDMYQETEEDKISVLDTWGAMAPAW 153
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G+VG ++G++ + LS P +G + ++L TL G +++Y P ++K K
Sbjct: 154 GMVGTLIGLVLLLDTLSD-PTTIGPRMSLALITTLYGALIAYIFALPPAEKLKKRVDKNI 212
Query: 236 RLYIIVKKALIAYMNGAIPQVAIE 259
++ + +++ + G P + E
Sbjct: 213 NQMRMMLEGILSIVQGENPHLMEE 236
>gi|119503685|ref|ZP_01625768.1| flagellar motor protein PomA [marine gamma proteobacterium
HTCC2080]
gi|119460747|gb|EAW41839.1| flagellar motor protein PomA [marine gamma proteobacterium
HTCC2080]
Length = 255
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+F+ D ++M++ G+ + ++ +M +++ + +G+ PA+G++G ++G
Sbjct: 103 SFLKDGIQMLVDGSNQEV-VKAVMAKDMQQTMDRHNWGERVWRAVGDVAPAMGMIGTLVG 161
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ + N++ PK +G + V+L TL G +L+ + P+ ++ + + ++ +
Sbjct: 162 LVGMLVNMN-DPKAIGPQMAVALLTTLYGAVLANMVALPIADKLHLRKSNEKLIHQMCID 220
Query: 244 ALIAYMNGAIPQV 256
++A G P+V
Sbjct: 221 GVLAIQAGQNPRV 233
>gi|225849165|ref|YP_002729329.1| flagellar motor protein MotA [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644734|gb|ACN99784.1| chemotaxis protein MotA (Motility protein A) [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 253
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
GE+ P G+VGA++G+I A+ L ++P + I + T T+ GI+ SY L P ++K
Sbjct: 150 GETTPVFGLVGAVMGLILALKRL-ENPVEMAEGIAGAFTATVTGIVSSYLLFGPFGHKMK 208
Query: 229 S 229
+
Sbjct: 209 A 209
>gi|260438797|ref|ZP_05792613.1| chemotaxis protein PomA [Butyrivibrio crossotus DSM 2876]
gi|292808786|gb|EFF67991.1| chemotaxis protein PomA [Butyrivibrio crossotus DSM 2876]
Length = 269
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ ++ MG PA G+VG ++G+I + N+S + LG + V+L TL G +L+ +
Sbjct: 149 WDTLAAMG---PAWGMVGTLIGLINMLKNMSDASA-LGPNMAVALITTLYGSMLANWIAM 204
Query: 222 PLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
P+ ++++ + L ++ + L++ G P+V E + L ++R S
Sbjct: 205 PIANKLRVNNSDEIILKEVMIEGLLSIQAGENPRVIEEKLKSFLSPNDRNS 255
>gi|315125811|ref|YP_004067814.1| flagellar motor protein PomA [Pseudoalteromonas sp. SM9913]
gi|315014325|gb|ADT67663.1| flagellar motor protein PomA [Pseudoalteromonas sp. SM9913]
Length = 238
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G L+ + P+ ++
Sbjct: 131 LGDIAPAMGMIGTLIGLVAMLSNM-DDPKAIGPAMAVALLTTLYGAFLANVVAIPIQVKL 189
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+ + ++ ++ A++ +G P+V
Sbjct: 190 ELRKDEEAMNQRLILDAVLGIQDGQNPKV 218
>gi|113971063|ref|YP_734856.1| flagellar motor protein PomA [Shewanella sp. MR-4]
gi|114048293|ref|YP_738843.1| flagellar motor protein PomA [Shewanella sp. MR-7]
gi|113885747|gb|ABI39799.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113889735|gb|ABI43786.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
Length = 255
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 150 EIDIILYEK-----LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
E DI L E+ + + A +G PA+G++G ++G++ + N+S PK +G ++ V
Sbjct: 126 EKDIALTEERHRNGIAIFRAFGDVG---PAMGMIGTLVGLVAMLSNMS-DPKSIGPSMAV 181
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRK 263
+L TL G +++ + P+ ++ + R+ + L ++ A++A +G P+V + +
Sbjct: 182 ALLTTLYGAVVANMVAIPIADKL-TLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKN 240
Query: 264 VLPLSER 270
L +R
Sbjct: 241 YLAEKQR 247
>gi|188996770|ref|YP_001931021.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931837|gb|ACD66467.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
Length = 253
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
GE+ P G+VGA++G+I A+ L ++P + I + T T+ GI+ SY L P ++K
Sbjct: 150 GETTPVFGLVGAVMGLILALKRL-ENPVEMAEGIAGAFTATVTGIVSSYLLFGPWGHKMK 208
Query: 229 S 229
+
Sbjct: 209 A 209
>gi|297583573|ref|YP_003699353.1| MotA/TolQ/ExbB proton channel [Bacillus selenitireducens MLS10]
gi|297142030|gb|ADH98787.1| MotA/TolQ/ExbB proton channel [Bacillus selenitireducens MLS10]
Length = 270
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+++M E+ + K + GE PA G++G ++G++ + NL+ P LG +
Sbjct: 130 IKDIMMAEVVAMEERHRKGRSIVEKAGEYAPAWGMIGTLVGLVLMLQNLN-DPSTLGPNM 188
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIK-STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
++L TL G +++ + P+ ++++ ST + R ++V + +I +G P++ E
Sbjct: 189 AIALLTTLYGTLMANLVFLPMANKLELSTEEEVFRKQVVV-EGVIGVQSGQNPKILQEKL 247
Query: 262 RKVLP 266
LP
Sbjct: 248 SAFLP 252
>gi|167750718|ref|ZP_02422845.1| hypothetical protein EUBSIR_01696 [Eubacterium siraeum DSM 15702]
gi|167656397|gb|EDS00527.1| hypothetical protein EUBSIR_01696 [Eubacterium siraeum DSM 15702]
Length = 145
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES-LPAIGIVGAILGIIKAMGN 190
M+IV ++++++D+ ID + E+ + G S PA G++G ++G++ +
Sbjct: 1 MLIVDANDLDKVKSMLDDAIDF-MCERHERGRLFFEKGMSVFPAFGMLGTLVGLVNMLKG 59
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ L + + V+L T G + S L P+ S +K++ ++ I+++ +++
Sbjct: 60 MGADSSNLSSGMAVALITTFYGSLFSNVLFAPIASSLKNSHEQELLCMQIIEEGVLSIAA 119
Query: 251 GAIPQVAIE 259
G+ P++ E
Sbjct: 120 GSNPRLIQE 128
>gi|150019085|ref|YP_001311339.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
gi|149905550|gb|ABR36383.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
Length = 262
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 22/256 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
TI+ + +CI+ GF GG P L+QP +IV G +G ++ PL +K L
Sbjct: 5 TILSILFAFVCIVVGFVIEGGKPIALLQPTAALIVIGGTIGAIGISFPLTTLKKFPKVLS 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
F K D +L I + + G S+ + L N+L
Sbjct: 65 IAFRKKE--SDLKEHILYFKEISIKTRRDG-----------------LLSLESEL-TNDL 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
FI ++M++ G ++N+++ +++ + + G P +GIVG I
Sbjct: 105 DPFIKRGLQMVVDG-IDPASVKNILNTKLEQLSARHEDYSEMFTSAGGYAPTMGIVGTIT 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ + +LS K +G I V+ TL G+ + P+ +++K K+ ++
Sbjct: 164 SLVIILSDLSDVAK-MGEKIAVAFIATLYGLGTANLFWIPIANKLKEINKKEIAEKEMII 222
Query: 243 KALIAYMNGAIPQVAI 258
+A++ G P +
Sbjct: 223 EAVLLIQEGVNPNTLV 238
>gi|116619473|ref|YP_821629.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
gi|116222635|gb|ABJ81344.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
Length = 303
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 36/243 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ G+ + + IIGG G+ + Q +IV G G ++ P+ ++ +
Sbjct: 30 LATLGGIGLALSGIIGGLILEKGSISDVAQGTAAMIVLGGTFGAVLVTTPMAIVVRAFKG 89
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG---SRNETENHIDDPYNSTIFTSIPTVL 117
L +F +A D + ++ L +K S + I DP
Sbjct: 90 LGAVFFERA---DGMTETIEALIGYAGKARKHGIVSLEGDASEIADP------------- 133
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--ISHMGESLPAI 175
F+ + + + G E+ +M EIDI L E A G P I
Sbjct: 134 -------FLRKALNLAVDGT-DMQELRKMM--EIDIALSEHAAESEARVWDSAGGYAPTI 183
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILS----YSLCNPLTSQIKSTR 231
GI+GA++G+I+ M +L + K +G I V+ T+ G+ L+ N L ++++++
Sbjct: 184 GIIGAVMGLIQVMKHL-EDIKEVGHGIAVAFVATVYGVGLANIFFLPAANKLKARMRASS 242
Query: 232 LKQ 234
L++
Sbjct: 243 LRK 245
>gi|254973921|ref|ZP_05270393.1| chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091308|ref|ZP_05320786.1| chemotaxis protein [Clostridium difficile CIP 107932]
gi|255312965|ref|ZP_05354548.1| chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255515724|ref|ZP_05383400.1| chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255648818|ref|ZP_05395720.1| chemotaxis protein [Clostridium difficile QCD-37x79]
gi|260682037|ref|YP_003213322.1| chemotaxis protein [Clostridium difficile CD196]
gi|260685635|ref|YP_003216768.1| chemotaxis protein [Clostridium difficile R20291]
gi|306518933|ref|ZP_07405280.1| chemotaxis protein [Clostridium difficile QCD-32g58]
gi|260208200|emb|CBA60546.1| chemotaxis protein [Clostridium difficile CD196]
gi|260211651|emb|CBE01910.1| chemotaxis protein [Clostridium difficile R20291]
Length = 272
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EI ++++ EID + + G PA G++G ++G+I+ + +L+ SP ++ +
Sbjct: 127 EIRSILELEIDSVEETNNRYSKLFKTWGTFAPAFGMLGTLIGLIQMLSDLT-SPDLIASG 185
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+G +L T G +L+ NP+ I K+ I VK+ ++ + ++I+ G
Sbjct: 186 MGKALITTFYGSLLANIALNPIAYNIDEKTEKE----IYVKEMMLEGI------ISIQSG 235
Query: 262 RKVLPLSERPSIEIVAQEVLQYNHNKK 288
+ + ER + + E L+ + K
Sbjct: 236 ESSIVVEERLATYLSNNEKLEIMKSNK 262
>gi|288553787|ref|YP_003425722.1| flagellar motor protein MotP [Bacillus pseudofirmus OF4]
gi|34485058|gb|AAB94399.2| channel protein [Bacillus pseudofirmus OF4]
gi|288544947|gb|ADC48830.1| Flagellar motor rotation protein motP [Bacillus pseudofirmus OF4]
gi|327187184|dbj|BAK08925.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
gi|327187187|dbj|BAK08927.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
gi|327187190|dbj|BAK08929.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
gi|327187193|dbj|BAK08931.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 266
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+++M E+ + K I GE PA G++G ++G++ + NL+ P LG +
Sbjct: 129 IKDIMMAEVVAMEERHRKGRAIIEKAGEYAPAWGMIGTLIGLVLMLQNLN-DPATLGPNM 187
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
V+L TL G +L+ + P+ +++ + ++ + I+ + +I +G P++
Sbjct: 188 AVALLTTLYGTVLANLIFLPMATKLANKTDEEVFVKQIIIEGVIGVQSGQNPKI 241
>gi|163749514|ref|ZP_02156762.1| flagellar motor protein [Shewanella benthica KT99]
gi|161330923|gb|EDQ01850.1| flagellar motor protein [Shewanella benthica KT99]
Length = 255
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 150 EIDIILYEKLKPY--HAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLT 207
E DI L E+ + +G+ PA+G++G ++G++ + N+ PK +G A+ ++L
Sbjct: 126 EKDIALTEQRHKMGISIFTAIGDVAPAMGMIGTLVGLVGMLSNMD-DPKSIGPAMAIALL 184
Query: 208 GTLLGIILSYSLCNPLTSQIKSTRLKQHRL-YIIVKKALIAYMNGAIPQVAIEYGRKVLP 266
TL G +++ + P+ ++ R+ + L ++ A++A +G P+V + + L
Sbjct: 185 TTLYGAMIANMVAIPIAGKL-GLRMAEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKNYLS 243
Query: 267 LSER 270
+R
Sbjct: 244 ERQR 247
>gi|68164501|gb|AAY87230.1| predicted flagellar motor component [uncultured bacterium BAC17H8]
Length = 253
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
LE E+ + ++V A ++ + +EI + I + PA+G
Sbjct: 95 LEGQEVPDAFFEKGLQMLVDGADEAKLTAQLKQEIKSMKSRHEANQGVIKAWVDLAPAMG 154
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
++G ++G++ +GN++ PK +G A+ V+L TL G ++ L PL ++++
Sbjct: 155 MIGTLIGLVLMLGNMA-DPKAIGPAMAVALLTTLYGAFIANILFAPLVTKLEG 206
>gi|88798990|ref|ZP_01114571.1| Flagellar motor component [Reinekea sp. MED297]
gi|88778217|gb|EAR09411.1| Flagellar motor component [Reinekea sp. MED297]
Length = 244
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILS 216
E LK +G P +GI+GA+LG+I+ M + + I G I + T+ G+ L+
Sbjct: 136 EWLKGADFFDSLGGYAPTMGIIGAVLGLIQVMTQIEDTQAI-GLGIATAFVATIYGVGLA 194
Query: 217 YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
P+ +++S + + + + L++ ++G P++
Sbjct: 195 NLFFLPVAGRLRSEAMTRSQQEEMALDGLLSILDGENPRM 234
>gi|126697828|ref|YP_001086725.1| chemotaxis protein [Clostridium difficile 630]
gi|255099424|ref|ZP_05328401.1| chemotaxis protein [Clostridium difficile QCD-63q42]
gi|115249265|emb|CAJ67078.1| Flagellar motor rotation protein MotA [Clostridium difficile]
Length = 272
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EI ++++ EID + + G PA G++G ++G+I+ + +L+ SP ++ +
Sbjct: 127 EIRSILELEIDSVEDTNNRYSKLFKTWGTFAPAFGMLGTLIGLIQMLADLT-SPDLIASG 185
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+G +L T G +L+ NP+ I K+ I VK+ ++ + ++I+ G
Sbjct: 186 MGKALITTFYGSLLANIALNPIAYNIDEKTEKE----IYVKEMMLEGI------ISIQSG 235
Query: 262 RKVLPLSERPSIEIVAQEVLQYNHNKK 288
+ + ER + + E L+ + K
Sbjct: 236 ESSIVVEERLATYLSNNEKLEIMKSNK 262
>gi|183222195|ref|YP_001840191.1| chemotaxis MotA protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189912249|ref|YP_001963804.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776925|gb|ABZ95226.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780617|gb|ABZ98915.1| Chemotaxis MotA protein; putative membrane protein; putative signal
peptide [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 245
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQ-PFEIVIVAG---AGLGGFVMANPLKVIKDS 57
ST++G+ + IL + G + P +IV G A F ++ K ++D+
Sbjct: 4 STLLGILVAILSVFVAILIEGASLRSFFHIPAMFLIVGGTLGATFASFSISQISKAVRDT 63
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
AL + D LKL++ + + +R + ++D L
Sbjct: 64 ---------RYALRKQKETD-LKLVF---FRFWEKARKDGLLSLEDESKK---------L 101
Query: 118 ENNELTTFICDYMRMIIVG-NARSYEIENLMD--EEIDIILYEKLKPYHAISHMGESLPA 174
+N +F+ +++I+ G + R+ E E L + EE + + + K + + P
Sbjct: 102 DN----SFLQKGIQLIVDGSDPRTIE-EILWEAHEEKEKVDLKSAKIFETAAGFS---PT 153
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
IGI+G +LG++ + NL K LG I + T GI + + P+++Q+K
Sbjct: 154 IGIIGTVLGLVTVLENLDGGTKALGQGIATAFIATFYGISFANLILLPISNQLK 207
>gi|315928503|gb|EFV07808.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
305]
Length = 200
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 125 FICDYMRMIIVGNA-----RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + M M++ G + S EI+ EE Y++ Y + GE+ P +G+VG
Sbjct: 107 FLKNAMMMLVDGKSFEEIHESMEIQTEQLEE----HYKECAEYWIV--FGETCPTMGLVG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSL 219
A+ G+I A+ L +P+ + I + T T+ GI +Y+L
Sbjct: 161 AVFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYAL 199
>gi|291280095|ref|YP_003496930.1| flagellar motor protein MotA [Deferribacter desulfuricans SSM1]
gi|290754797|dbj|BAI81174.1| flagellar motor protein MotA [Deferribacter desulfuricans SSM1]
Length = 254
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA+G++G ++G++ + +S P +G A+ V+L T G I++ PL ++K+
Sbjct: 153 PAMGMIGTLIGLVAMLQTMSD-PSSIGPAMAVALLTTFYGAIIANLFAAPLAGKLKTRSA 211
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ L I+ ++A G P++ + LP R S
Sbjct: 212 EEILLREIMIAGIMAIQAGDNPRIVEQKLNAYLPPKMRKS 251
>gi|307825894|ref|ZP_07656109.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307733013|gb|EFO03875.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 277
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 34 IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGS 93
+VIV G + ++ PL+ IK S S+ IF Y++L + + + + +N K +
Sbjct: 57 LVIVIGGTIAAIFLSYPLRDIKHSLKSIKLIFFYESLNPQREANEIIAVSQMWFNKDKLA 116
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLM-DEEID 152
T + I++PY T F + D+ + + + + I L E+ +
Sbjct: 117 IENTIDSINNPYLKTGF-------------QLVVDHTPVEDILSLLKWRIARLRAKEKAE 163
Query: 153 IILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT--AIGVSLTGTL 210
++ L Y PA G++G ++ +I M + + I G ++G +L T
Sbjct: 164 ASIFYSLAAYS---------PAFGMLGTLIAMIN-MLQIIELKDIAGISYSMGTALITTF 213
Query: 211 LGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
G+I++ + NP+ IK R + R+ I+
Sbjct: 214 YGLIMANLIFNPIA--IKLERRTEQRIMIM 241
>gi|326795347|ref|YP_004313167.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326546111|gb|ADZ91331.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 255
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ M M + Y I + +ID + MG PA G++G ++G+
Sbjct: 105 FLKRAMNMASDASDEDY-IRKTLQADIDSLKMRHYVIQDVFKKMGLYAPAFGMLGTLIGL 163
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I+ + L +P+ +G ++ V+L T G +LS + NP+ ++K+ + + + I++
Sbjct: 164 IQMLAQL-DNPESIGPSMAVALLTTFYGSLLSTVIFNPIAGKLKARTILEIQTLEIIRDG 222
Query: 245 LIAYM 249
++ +
Sbjct: 223 TVSLL 227
>gi|51598541|ref|YP_072729.1| flagellar motor rotation protein A [Borrelia garinii PBi]
gi|219684631|ref|ZP_03539574.1| chemotaxis protein MotA (Motility protein A) [Borrelia garinii PBr]
gi|51573112|gb|AAU07137.1| flagellar motor rotation protein A [Borrelia garinii PBi]
gi|219671993|gb|EED29047.1| chemotaxis protein MotA (Motility protein A) [Borrelia garinii PBr]
Length = 260
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G++G ++G++ +GNL + LG+
Sbjct: 122 EVIRTMLYLELDQMQERHRVGSELFKTWAKLAPAFGMIGTLIGLVALLGNL-EDKSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++ ++ + ++ + +++ +G P++
Sbjct: 181 SMAVALITTLYGTIMANLMFTPVQLKLEKIDSEEAAVKTMIIEGVLSIQSGDNPRI 236
>gi|323698016|ref|ZP_08109928.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323457948|gb|EGB13813.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 297
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++V N + EI ++ E+ + + + + PA G+ G+++G+I + ++
Sbjct: 113 LLVDNYKEEEIRECLNAEMAFFNLRRQQSERFFQTLARTAPAFGVAGSVIGLIGLLMGIN 172
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK-STR 231
+ IL I V+ TL G+ILS+ + +P+ I STR
Sbjct: 173 DTAVILKN-IPVAFISTLYGLILSHLVFSPIAENINYSTR 211
>gi|15615802|ref|NP_244106.1| flagellar motor protein MotP [Bacillus halodurans C-125]
gi|10175863|dbj|BAB06959.1| flagellar motor apparatus [Bacillus halodurans C-125]
Length = 269
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+++M E+ + K I E PA G++G ++G++ + NL+ P LG +
Sbjct: 130 IKDIMMAEVTAMEERHTKSRALIDKAAEYAPAWGMIGTLIGLVLMLQNLN-DPSTLGPNM 188
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
V+L TL G +L+ + P+++++ + + + I+ + +I +G P++
Sbjct: 189 AVALLTTLYGTVLANLVFLPMSTKLMNKTDSEVFVKQIIIEGVIGVQSGQNPKI 242
>gi|332534967|ref|ZP_08410785.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
gi|332035585|gb|EGI72077.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
Length = 238
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA+G++G ++G++ + N+ PK +G A+ V+L TL G L+ + P+ +++ +
Sbjct: 136 PAMGMIGTLIGLVAMLSNM-DDPKAIGPAMAVALLTTLYGAFLANVVAIPIQVKLELRKD 194
Query: 233 KQHRLYIIVKKALIAYMNGAIPQV 256
++ ++ A++ +G P+V
Sbjct: 195 EEAMNQRLILDAILGIQDGQNPKV 218
>gi|255305282|ref|ZP_05349454.1| chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 272
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EI ++++ EID + + G PA G++G ++G+I+ + +L+ SP ++ +
Sbjct: 127 EIRSILELEIDSVEDTNNRYSKLFKTWGTFAPAFGMLGTLIGLIQMLADLT-SPDLIASG 185
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+G +L T G +L+ NP+ I K+ + ++ + +I+ +G V E
Sbjct: 186 MGKALITTFYGSLLANIALNPIAYNIDEKTEKEIYVKEMMLEGIISIQSGESSIVVEE-- 243
Query: 262 RKVLPLSERPSIEIV 276
R LS +EI+
Sbjct: 244 RLATYLSNNEKLEII 258
>gi|119953080|ref|YP_945289.1| chemotaxis MotA protein [Borrelia turicatae 91E135]
gi|119861851|gb|AAX17619.1| chemotaxis MotA protein [Borrelia turicatae 91E135]
Length = 261
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G+ G ++G+I +GNL + LG+
Sbjct: 122 EIIRTMLYLELDQMQERHKIGADLFGTWAKLAPAFGMTGTLIGLIALLGNL-EDRSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++S +++ + ++ + +++ G P++
Sbjct: 181 SMAVALITTLYGTIMANLMLLPIQIKLESIDIEEASVKTMIVEGILSIQAGDNPRI 236
>gi|120603949|ref|YP_968349.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|120564178|gb|ABM29922.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
Length = 252
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 143 IENLMDEEIDIILY---EKLKPYHA-----ISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
++ L E I+ IL E ++ H + MG PA+G++G ++G+++ + ++
Sbjct: 115 VDGLEPEAIEDILRCEMENMETRHESGAAIFAAMGAYAPALGLIGTVIGLVQMLKRMN-D 173
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
P +G A+ V+L T G +L+ + PL +++ ++ +L + ++A G P
Sbjct: 174 PSTIGPAMSVALITTFYGAVLANLVFLPLVGKLRHRSRQEIQLMEMQLAGILAIARGENP 233
Query: 255 QVAIE 259
++ E
Sbjct: 234 RIIRE 238
>gi|229017015|ref|ZP_04173935.1| Chemotaxis protein, MotA [Bacillus cereus AH1273]
gi|229023197|ref|ZP_04179708.1| Chemotaxis protein, MotA [Bacillus cereus AH1272]
gi|228738122|gb|EEL88607.1| Chemotaxis protein, MotA [Bacillus cereus AH1272]
gi|228744286|gb|EEL94368.1| Chemotaxis protein, MotA [Bacillus cereus AH1273]
Length = 116
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + NL + +I T
Sbjct: 9 ELKEVLMKDVETEVYELRKGATLLDKIGDFAPAYGMIGTLIGLIIMLQNLQDTSQI-ATG 67
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQI 227
+ V++ TL G I++ + PL+ ++
Sbjct: 68 MAVAMLTTLYGSIIANMIVIPLSEKV 93
>gi|46578467|ref|YP_009275.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|46447878|gb|AAS94534.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|311232395|gb|ADP85249.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 252
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 143 IENLMDEEIDIILY---EKLKPYHA-----ISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
++ L E I+ IL E ++ H + MG PA+G++G ++G+++ + ++
Sbjct: 115 VDGLEPEAIEDILRCEMENMETRHESGAAIFAAMGTYAPALGLIGTVIGLVQMLKRMN-D 173
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
P +G A+ V+L T G +L+ + PL +++ ++ +L + ++A G P
Sbjct: 174 PSTIGPAMSVALITTFYGAVLANLVFLPLVGKLRHRSRQEIQLMEMQLAGILAIARGENP 233
Query: 255 QVAIE 259
++ E
Sbjct: 234 RIIRE 238
>gi|302343052|ref|YP_003807581.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301639665|gb|ADK84987.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 260
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 71/161 (44%), Gaps = 1/161 (0%)
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
P LE + + ++ R +I +++ E + ++ + M E P
Sbjct: 92 PLALEKMKPPSEFMGTAFQLVADGMRPEDIRHVLTIEAEAAYSRSMEVIGVMEKMAELAP 151
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A G++G ++G++ + NLS P +G A+ V+L T G + + L +P ++++ +
Sbjct: 152 AWGMIGTLIGLVIMLLNLSD-PSAIGPAMAVALLTTFYGALWANFLLSPGATKLEERAGR 210
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
Q + +V + + P+ + +P S+R ++
Sbjct: 211 QSEDFKLVIEGAMGMARNENPRQIQQRLMGFMPPSDRAELQ 251
>gi|87121844|ref|ZP_01077730.1| chemotaxis protein MotA [Marinomonas sp. MED121]
gi|86162873|gb|EAQ64152.1| chemotaxis protein MotA [Marinomonas sp. MED121]
Length = 265
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + M N Y I + +ID + MG PA G++G ++G+
Sbjct: 105 FLKRALNMAADANDEDY-IRKTLQADIDSLKMRHYVVQDVFKKMGSYAPAFGMLGTLVGL 163
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I+ + L P+ +G A+ V+L T G +++ + P+ ++K+ + + + I++
Sbjct: 164 IQMLSKLD-DPEAIGPAMAVALLTTFYGSLMATVIFLPIAGKLKARTILEIQTLEIIRDG 222
Query: 245 LIAYM 249
++ M
Sbjct: 223 TVSLM 227
>gi|119472096|ref|ZP_01614327.1| flagellar motor protein PomA [Alteromonadales bacterium TW-7]
gi|119445116|gb|EAW26409.1| flagellar motor protein PomA [Alteromonadales bacterium TW-7]
Length = 238
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA+G++G ++G++ + N+ PK +G A+ V+L TL G L+ + P+ +++ +
Sbjct: 136 PAMGMIGTLIGLVAMLSNM-DDPKAIGPAMAVALLTTLYGAFLANVVAIPIQVKLELRKD 194
Query: 233 KQHRLYIIVKKALIAYMNGAIPQV 256
++ ++ A++ +G P+V
Sbjct: 195 EEAMNQRLILDAILGIQDGQNPKV 218
>gi|154173849|ref|YP_001407728.1| flagellar motor protein MotA [Campylobacter curvus 525.92]
gi|112803558|gb|EAU00902.1| flagellar motor protein [Campylobacter curvus 525.92]
Length = 257
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 30/259 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ +++ I G GG+P +I ++IV + + + K IK +
Sbjct: 3 LSTILGMLLSVTSISIGDILEGGSPLHVIHVSSLLIVIPTAIFSAMTSTNKKFIKPAFKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L IF + T DV KL+ L+ +L +R + + +P +TI E+
Sbjct: 63 LKIIF------KGTGTDVPKLIKELI-DLSVTARRDGLLAL-EPKVATI--------EDE 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM----GESLPAIG 176
F+ M M++ G EN+ EI I E+ YH H GES P G
Sbjct: 107 ----FLKSAMMMLVDGQPIGDIRENM---EIKIEQLEEY--YHECGHFWIKTGESCPTFG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
+VGA++ + L P + I + T T+ GI+ +Y++ P ++I + R
Sbjct: 158 LVGAVM-GLMLALALLDDPAAMAAGIAGAFTATVTGIMGAYAIFGPWGAKIMANAKDIIR 216
Query: 237 LYIIVKKALIAYMNGAIPQ 255
++ +A+ GA P+
Sbjct: 217 TKTVIIEAVTGIAEGANPR 235
>gi|1185053|gb|AAB58962.1| flagellar motor apparatus [Borrelia burgdorferi]
Length = 260
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G+ G ++G++ +GNL + LG+
Sbjct: 122 EVIRTMLYLELDQMQERHKVGSDLFKTSRKLAPAFGMTGTLIGLVALLGNL-EDKSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++ ++ + ++ + +++ +G P++
Sbjct: 181 SMAVALITTLYGTIMANLMFTPVQLKLEKIDTEEAAVKTMIIEGVLSIQSGDNPRI 236
>gi|307718608|ref|YP_003874140.1| chemotaxis protein MotA [Spirochaeta thermophila DSM 6192]
gi|306532333|gb|ADN01867.1| chemotaxis protein MotA [Spirochaeta thermophila DSM 6192]
Length = 262
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLS-QSPKILG 199
E I +LY +L + +G + PA G++G ++G+I + NL+ +G
Sbjct: 122 EIIKTVLYTELNEMQSRHEVGAKIFDDWSKIAPAFGMIGTLIGLIAMLKNLAGGDTSAIG 181
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
+ +L TL G + + PL +++ + + I+ + +++ G P+V +E
Sbjct: 182 QGMATALITTLYGSLFANLFLIPLKNKLMDRDRDETLVREIMIEGILSIQAGDNPRVLLE 241
Query: 260 YGRKVLPLSERPSIEIVAQEV 280
LP ER E V QEV
Sbjct: 242 KLLSFLPPKER---EAVRQEV 259
>gi|15594626|ref|NP_212415.1| flagellar motor rotation protein A (motA) [Borrelia burgdorferi
B31]
gi|195941365|ref|ZP_03086747.1| flagellar motor rotation protein A (motA) [Borrelia burgdorferi
80a]
gi|216264391|ref|ZP_03436383.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
156a]
gi|218249470|ref|YP_002374804.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
ZS7]
gi|223888815|ref|ZP_03623406.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
64b]
gi|224533111|ref|ZP_03673711.1| chemotaxis protein MotA [Borrelia burgdorferi WI91-23]
gi|225552323|ref|ZP_03773263.1| chemotaxis protein MotA [Borrelia sp. SV1]
gi|226320582|ref|ZP_03796142.1| chemotaxis protein MotA [Borrelia burgdorferi 29805]
gi|226321599|ref|ZP_03797125.1| chemotaxis protein MotA [Borrelia burgdorferi Bol26]
gi|3915766|sp|Q44902|MOTA_BORBU RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|1165266|gb|AAA85605.1| MotA [Borrelia burgdorferi]
gi|2688185|gb|AAC66667.1| flagellar motor rotation protein A (motA) [Borrelia burgdorferi
B31]
gi|215980864|gb|EEC21671.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
156a]
gi|218164658|gb|ACK74719.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
ZS7]
gi|223885631|gb|EEF56730.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
64b]
gi|224511838|gb|EEF82239.1| chemotaxis protein MotA [Borrelia burgdorferi WI91-23]
gi|225371321|gb|EEH00751.1| chemotaxis protein MotA [Borrelia sp. SV1]
gi|226232788|gb|EEH31541.1| chemotaxis protein MotA [Borrelia burgdorferi Bol26]
gi|226234001|gb|EEH32722.1| chemotaxis protein MotA [Borrelia burgdorferi 29805]
gi|312149366|gb|ADQ29437.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
N40]
Length = 260
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G+ G ++G++ +GNL + LG+
Sbjct: 122 EVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGTLIGLVALLGNL-EDKSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++ ++ + ++ + +++ +G P++
Sbjct: 181 SMAVALITTLYGTIMANLMFTPVQLKLEKIDTEEAAVKTMIIEGVLSIQSGDNPRI 236
>gi|225549157|ref|ZP_03770132.1| chemotaxis protein MotA [Borrelia burgdorferi 94a]
gi|225370383|gb|EEG99821.1| chemotaxis protein MotA [Borrelia burgdorferi 94a]
gi|312148419|gb|ADQ31078.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
JD1]
Length = 260
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G+ G ++G++ +GNL + LG+
Sbjct: 122 EVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGTLIGLVALLGNL-EDKSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++ ++ + ++ + +++ +G P++
Sbjct: 181 SMAVALITTLYGTIMANLMFTPVQLKLEKIDTEEAAVKTMIIEGVLSIQSGDNPRI 236
>gi|221217706|ref|ZP_03589174.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
72a]
gi|224533822|ref|ZP_03674410.1| chemotaxis protein MotA [Borrelia burgdorferi CA-11.2a]
gi|225550103|ref|ZP_03771063.1| chemotaxis protein MotA [Borrelia burgdorferi 118a]
gi|221192383|gb|EEE18602.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
72a]
gi|224513115|gb|EEF83478.1| chemotaxis protein MotA [Borrelia burgdorferi CA-11.2a]
gi|225369215|gb|EEG98668.1| chemotaxis protein MotA [Borrelia burgdorferi 118a]
Length = 260
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G+ G ++G++ +GNL + LG+
Sbjct: 122 EVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGTLIGLVALLGNL-EDKSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++ ++ + ++ + +++ +G P++
Sbjct: 181 SMAVALITTLYGTIMANLMFTPVQLKLEKIDTEEAAVKTMIIEGVLSIQSGDNPRI 236
>gi|75675429|ref|YP_317850.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74420299|gb|ABA04498.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
Length = 257
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGE 170
P LE E T F+ +R + G + +NL + + +++ E K Y AI G+
Sbjct: 93 PVGLEKVETTEPFLAKGVRFVADGYDLEFIRDNLERDRDNFLMHLDEGSKIYRAI---GD 149
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKI---LGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
PA G++G ++G+++ N++ K+ + TA+ +L G L+ + C P+ ++
Sbjct: 150 CAPAFGMIGTLIGMVQMFANMTDPSKLGPFMATALLATLYGALVANL----FCLPIADKL 205
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L + ++ ++ + P + E LP R
Sbjct: 206 HGKLLDEETNRTLIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|315186379|gb|EFU20139.1| MotA/TolQ/ExbB proton channel [Spirochaeta thermophila DSM 6578]
Length = 262
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLS-QSPKILG 199
E I +LY +L + +G + PA G++G ++G+I + NL+ +G
Sbjct: 122 EIIKTVLYTELNEMQSRHEVGAKVFDDWSKIAPAFGMIGTLIGLIAMLKNLAGGDTSAIG 181
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
+ +L TL G + + PL +++ + + I+ + +++ G P+V +E
Sbjct: 182 QGMATALITTLYGSLFANLFLIPLKNKLMDRDRDETLVREIMIEGILSIQAGDNPRVLLE 241
Query: 260 YGRKVLPLSERPSIEIVAQEV 280
LP ER E V QEV
Sbjct: 242 KLLSFLPPKER---EAVRQEV 259
>gi|42524416|ref|NP_969796.1| motility protein A [Bdellovibrio bacteriovorus HD100]
gi|39576625|emb|CAE80789.1| motility protein A [Bdellovibrio bacteriovorus HD100]
Length = 293
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--SPKILGTAIGVSLTGTLLGII 214
E++K +H +S PA G++GA LG+I + L + + +G A+ +L T G++
Sbjct: 166 EEIKVWHTMSRFP---PAFGLLGATLGMISLLQTLGEPGAQDRIGPAMATALVATFYGLV 222
Query: 215 LSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ + P++ ++++ L I+K+ ++ P EY + L ++R
Sbjct: 223 VANLILIPISEKLQTVSKADVTLREIIKEGILLVHEKKHPLFIKEYLKSFLSPAQRED-- 280
Query: 275 IVAQEVLQYNHNKKAS 290
L+ + KKA+
Sbjct: 281 ---DGALKVDTAKKAA 293
>gi|219685775|ref|ZP_03540586.1| chemotaxis protein MotA (Motility protein A) [Borrelia garinii
Far04]
gi|219672714|gb|EED29742.1| chemotaxis protein MotA (Motility protein A) [Borrelia garinii
Far04]
Length = 260
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G++G ++G++ +GNL + LG+
Sbjct: 122 EVIRTMLYLELDQMQERHRVGSELFKTWAKLAPAFGMIGTLIGLVALLGNL-EDKSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++ ++ + ++ + +++ +G P++
Sbjct: 181 SMAVALITTLYGTIMANLMFTPVQLKLEKIDSEEAVVKTMIIEGVLSIQSGDNPRI 236
>gi|154687113|ref|YP_001422274.1| flagellar motor protein MotP [Bacillus amyloliquefaciens FZB42]
gi|154352964|gb|ABS75043.1| YtxD [Bacillus amyloliquefaciens FZB42]
Length = 271
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G I + I+ G G + ++ + F +IV G ++ P + +K + L +
Sbjct: 13 MLGCIIVAIGILSGTGLAGISSFLDLTSF--LIVTGGLAAAIFISFPPRDLKKTPSVLKQ 70
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F QD D +K L + +L + +R + +DD + E+
Sbjct: 71 VFSR----QD---DNVKELVRVFVSLSEQARRQGLLSLDD--------------QAREIK 109
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
++ + I +MD EI + K G+ PA G++G ++G
Sbjct: 110 DPFLKKGLLLAIDGWDEETIRLVMDSEIAAMEERHRKGRRVFEKAGDFAPAWGMIGTLVG 169
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
++ + NL+ P LG + V+L TL G +L+ + P+ ++++
Sbjct: 170 LVLMLKNLN-DPHTLGPNMAVALLTTLYGALLANLVFIPIAAKLEE 214
>gi|332558676|ref|ZP_08412998.1| MotA [Rhodobacter sphaeroides WS8N]
gi|3024167|sp|Q53174|MOTA_RHOSH RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|758646|emb|CAA59974.1| MotA [Rhodobacter sphaeroides]
gi|332276388|gb|EGJ21703.1| MotA [Rhodobacter sphaeroides WS8N]
gi|1586756|prf||2204359A motA gene
Length = 253
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
PA+G+VG ++G++ +GN+S PK +G A+ V+L TL G +++ + P+ ++++
Sbjct: 151 PAMGMVGTLIGLVLMLGNMS-DPKSIGPAMAVALLTTLYGALMANVIFAPILNKLE 205
>gi|83312264|ref|YP_422528.1| flagellar motor component [Magnetospirillum magneticum AMB-1]
gi|82947105|dbj|BAE51969.1| Flagellar motor component [Magnetospirillum magneticum AMB-1]
Length = 405
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 81/181 (44%), Gaps = 22/181 (12%)
Query: 98 ENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE 157
E H + P +S++F + + L T + D++R++ +G+ + + L+ + E
Sbjct: 47 EAHAEMPLSSSLFFHHKPMRDLPWLLTPLVDFIRLMTLGSNNAKQARRLLQAYRET---E 103
Query: 158 KLKPYHAISHMGESLP---AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGII 214
K H + P + I G L ++ ++G L + + + ++ G ++GI
Sbjct: 104 KRALDHVLRQASLVWPMGFCLWIAG--LAVLASLGGLGLT-ALAWWGVSLAAAGVMVGIW 160
Query: 215 LSYSLCNPLTSQIKSTRLKQHRLYII--VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
L ++ + HRL ++ + + ++Y+NG Q+ E R VLP + +PS
Sbjct: 161 L-----------VRLRTIADHRLGVLDAMTEGCLSYLNGYAQQICAENARFVLPPALKPS 209
Query: 273 I 273
Sbjct: 210 F 210
>gi|254438117|ref|ZP_05051611.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
gi|198253563|gb|EDY77877.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
Length = 266
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA+G++G ++G++ +GN+S P+ +G A+ V+L T+ G I++ + P+ S +L
Sbjct: 164 PAMGMIGTLIGLVLMLGNMS-DPQAIGPAMAVALLTTMYGAIVANVIFAPMLS-----KL 217
Query: 233 KQHRLYIIVKKALI 246
+ + Y +V + +I
Sbjct: 218 EGYTAYEVVYREMI 231
>gi|302873042|ref|YP_003841675.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|307688802|ref|ZP_07631248.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|302575899|gb|ADL49911.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
Length = 260
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N+ + FI ++ G +S I+ +++ E++ + + S G P +GI+
Sbjct: 102 NDGIDPFIKKGFQLAADGTEQSV-IQGILETELEQMADRHDEGIEMFSAAGGYSPTMGII 160
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G ++G+++ + NL P LG I + TL GI ++ P+ +++K
Sbjct: 161 GTVMGLLQVVANLD-DPLALGVKIAAAFMATLYGIAMANLFWLPIANKLK 209
>gi|94500735|ref|ZP_01307264.1| chemotaxis MotA protein [Oceanobacter sp. RED65]
gi|94427057|gb|EAT12038.1| chemotaxis MotA protein [Oceanobacter sp. RED65]
Length = 266
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+S +I +M + +D + ++ MG P G+VG I+G+I + N+ L
Sbjct: 126 KSADIRVIMGDAMDSHWQRQSLEGKVLNTMGVYAPGFGMVGTIVGLIIMLDNMGDDMANL 185
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ---HRLYI 239
G + ++L TL G++L+ L P + + + ++ H+L I
Sbjct: 186 GKGLALALITTLYGVLLANLLFKPTAAHVTEKQEQEFFKHQLMI 229
>gi|221639653|ref|YP_002525915.1| chemotaxis protein motA [Rhodobacter sphaeroides KD131]
gi|221160434|gb|ACM01414.1| Chemotaxis protein motA [Rhodobacter sphaeroides KD131]
Length = 253
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
PA+G+VG ++G++ +GN+S PK +G A+ V+L TL G +++ + P+ ++++
Sbjct: 151 PAMGMVGTLIGLVLMLGNMS-DPKSIGPAMAVALLTTLYGALIANVIFAPILNKLE 205
>gi|213025492|ref|ZP_03339939.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 41
Score = 40.0 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
LMDEEI+ E P ++++ +G+SLPA GIV A++G++
Sbjct: 2 LMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAVMGVV 41
>gi|77463801|ref|YP_353305.1| flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126462637|ref|YP_001043751.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|77388219|gb|ABA79404.1| Flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126104301|gb|ABN76979.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
Length = 253
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
PA+G+VG ++G++ +GN+S PK +G A+ V+L TL G +++ + P+ ++++
Sbjct: 151 PAMGMVGTLIGLVLMLGNMS-DPKSIGPAMAVALLTTLYGALIANVIFAPILNKLE 205
>gi|302874599|ref|YP_003843232.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|307690790|ref|ZP_07633236.1| chemotaxis MotA protein [Clostridium cellulovorans 743B]
gi|302577456|gb|ADL51468.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
Length = 268
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I+ +++ EID + + + + +G+ PA G+VG ++G+I + L P + +++
Sbjct: 126 IKEILELEIDQMEERHSEGINLMKTLGDYAPAFGMVGTLIGLINMLAYL-DDPTTIASSM 184
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLK---QHRLYI-------------IVKKALI 246
V+L T G ILS L P ++ +K K Q + I +V++ LI
Sbjct: 185 AVALITTFYGTILSNMLYLPTSANLKLKSQKEVLQKEMMIEGILSVQSGVNTRVVEETLI 244
Query: 247 AYMNG 251
AY++
Sbjct: 245 AYLSS 249
>gi|253681791|ref|ZP_04862588.1| chemotaxis protein PomA [Clostridium botulinum D str. 1873]
gi|253561503|gb|EES90955.1| chemotaxis protein PomA [Clostridium botulinum D str. 1873]
Length = 269
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
+RM++ G I +++ EI + + G PA G++G ++G+I+ +
Sbjct: 115 LRMVVDG-IEPETIREILELEIGEMEKRHKDGSEVLKAWGGYAPAFGMLGTLIGLIQMLA 173
Query: 190 NLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
NL P LG +G +L T G +++ + NP+ + + ++ + ++ + ++A
Sbjct: 174 NLD-DPSNLGPGMGKALITTFYGSLMASLILNPMAANLMYKSSQEVTIREMMLEGVLAIQ 232
Query: 250 NGAIPQVAIE 259
+G P++ E
Sbjct: 233 SGVNPRIVEE 242
>gi|302387786|ref|YP_003823608.1| MotA/TolQ/ExbB proton channel [Clostridium saccharolyticum WM1]
gi|302198414|gb|ADL05985.1| MotA/TolQ/ExbB proton channel [Clostridium saccharolyticum WM1]
Length = 271
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 51/253 (20%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S I+G + I+ II G +I I ++IV G + + + P KV+
Sbjct: 3 ISLIVGWVLGIVLIIYGIGLQKMGNFIDIP--SVIIVVGGTIAALIASYPFKVLAQVPKH 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKG--SRNETENHIDDPYNSTIFTSIPTVLE 118
+ + K + D L + + KKG E N I DP+ + SI
Sbjct: 61 IGIMLSPKKYNAEKVIDTL--VEMAKTARKKGLLVLEEQANGIKDPF---LKQSI----- 110
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEI---------DIILYEKLKPYHAISHMG 169
M+IV + +I +++ E+ D+ +YEK G
Sbjct: 111 -------------MLIVDAMDAEKIREMLESEVAAMSERHDQDVSMYEK----------G 147
Query: 170 ESL-PAIGIVGAILGII---KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
S+ PA G++G ++G++ K+M S S LG + V+L T G +L++ L P+
Sbjct: 148 TSVAPAFGMIGTLVGLVNMLKSMNMDSGSANSLGADMSVALITTFYGCVLAHLLFGPMAK 207
Query: 226 QIKSTRLKQHRLY 238
+++ R + LY
Sbjct: 208 KLR-IRNDEELLY 219
>gi|332883636|gb|EGK03917.1| hypothetical protein HMPREF9456_01458 [Dysgonomonas mossii DSM
22836]
Length = 505
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 183 GIIKAMGNLSQSP-KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
G + M ++P K+ T++ T +LL I+ +S NP++S ++ T K+H + +
Sbjct: 68 GFFRFMNKKEENPDKVYATSLISLATTSLLFILFCFSFINPISSWMEYTEHKEHIWMMAI 127
Query: 242 KKALIAYMNGAIPQVAIEYGRK 263
AL A+M IP + Y ++
Sbjct: 128 GVALDAFMT--IPFAYLRYQKR 147
>gi|308174664|ref|YP_003921369.1| flagellar motor rotation protein [Bacillus amyloliquefaciens DSM 7]
gi|307607528|emb|CBI43899.1| motility protein (flagellar motor rotation) [Bacillus
amyloliquefaciens DSM 7]
gi|328554594|gb|AEB25086.1| flagellar motor protein MotP [Bacillus amyloliquefaciens TA208]
gi|328912998|gb|AEB64594.1| motility protein (flagellar motor rotation) [Bacillus
amyloliquefaciens LL3]
Length = 271
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I +MD EI + K G+ PA G++G ++G++ + NL+ P LG +
Sbjct: 129 IRLVMDSEIAAMEERHRKGRRVFEKAGDFAPAWGMIGTLVGLVLMLKNLN-DPHTLGPNM 187
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
++L TL G +L+ + P+ ++++ + + ++ + ++ +G P+
Sbjct: 188 AIALLTTLYGALLANLVFIPIAAKLEEKTESEIFIKQVIIEGVVGIQSGKNPR 240
>gi|20807042|ref|NP_622213.1| flagellar motor component [Thermoanaerobacter tengcongensis MB4]
gi|20515529|gb|AAM23817.1| Flagellar motor component [Thermoanaerobacter tengcongensis MB4]
Length = 273
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ I + ++ F GG L+ +IV G +G + + L+ IK
Sbjct: 5 IATIVGIIIGVGSLVYAFTLEGGTIGSLLGVSAALIVFGGTIGATITSYSLEDIKKVPAL 64
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++ F + ++ Y +++K L +R+E S E N
Sbjct: 65 LVKAFKDE---KENYMEIIKYFTYLAQK----ARSE---------GLLSLESEIESEEIN 108
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + + + +++ G+ I+ M+ +I + + K G P +GI+G
Sbjct: 109 KFDPILKECLELVVDGSDMEL-IKTTMENKIYMEDMQAKKEAGIFEAAGGYAPTMGIIGT 167
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS-TRLKQHRLYI 239
++G++ + ++S+ P+ LG AI ++ TL G+ + P+ ++K+ ++K +
Sbjct: 168 VMGLVHVLSSISE-PEKLGPAIAMAFIATLYGVSSANLFWLPIAQKLKNKAKIKTTEREL 226
Query: 240 IVKKAL 245
I++ +L
Sbjct: 227 ILEGSL 232
>gi|328948406|ref|YP_004365743.1| MotA/TolQ/ExbB proton channel [Treponema succinifaciens DSM 2489]
gi|328448730|gb|AEB14446.1| MotA/TolQ/ExbB proton channel [Treponema succinifaciens DSM 2489]
Length = 260
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + +R+++ GN S I ++++ E+ + + + P G++G ++G+
Sbjct: 107 FLKEGLRLMVDGNDGS-AIRSILENEMAQAESRHMSWINVVIQWAGFAPGYGMMGTVIGL 165
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I + NL + LG + V+L TL G +L+ L PL ++ + + +V +
Sbjct: 166 IGMLRNL-EDKSALGPNMAVALITTLYGSMLANWLFGPLAQKLIMQNGNEMNVKEMVLEG 224
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+++ G P++ G+K+L + S + + ++L+
Sbjct: 225 ILSIQAGDNPRI---LGQKLLTYLDPKSRKAIESDILK 259
>gi|121998796|ref|YP_001003583.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121590201|gb|ABM62781.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
Length = 301
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 15/172 (8%)
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETEN--HIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
D V +L++I++ N + +R++ E I + ++ LEN F+ +
Sbjct: 54 DEVLRVFRLVWIVIRNERVYTRDDMEELIRISQLWFKGDVRAVEDALENVA-NPFLRTGV 112
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM-- 188
+++I +I +L+ I + ++ M PA G++G ++G+I M
Sbjct: 113 QLLIDLTPEE-DILDLLQWRIQRLRAKEHAEAQIFRVMASFAPAFGMIGTLVGLINMMFI 171
Query: 189 ---GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
G+++Q +G +GV+L T GI+L+ + P+ +K R + RL
Sbjct: 172 LDDGDIAQ----IGQQMGVALLTTFYGILLANLVLKPVA--VKLERRTEQRL 217
>gi|331269324|ref|YP_004395816.1| chemotaxis MotA protein [Clostridium botulinum BKT015925]
gi|329125874|gb|AEB75819.1| chemotaxis MotA protein [Clostridium botulinum BKT015925]
Length = 269
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA G++G ++G+I+ + NL P LG +G +L T G +++ + NP+ + +
Sbjct: 157 PAFGMLGTLIGLIQMLANLD-DPSNLGPGMGKALITTFYGSLMASLILNPMAANLMYKSS 215
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIE 259
++ + ++ + ++A +G P++ E
Sbjct: 216 QEVTIREMMLEGVLAIQSGVNPRIVEE 242
>gi|268316338|ref|YP_003290057.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
gi|262333872|gb|ACY47669.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
Length = 262
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHM----GESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
E + E + + + E+ +P + + G P+ G++G ++G+++ M NL+ P +G
Sbjct: 120 EQEIAEMLQVRMTEEFRPIQLFAKIMNSAGTFAPSFGMIGTLIGLVQMMQNLT-DPTQIG 178
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
+ V++ TL G +L+ + PL ++ K
Sbjct: 179 AGMAVAMLTTLYGAVLANLVFLPLANKTK 207
>gi|146277437|ref|YP_001167596.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
gi|145555678|gb|ABP70291.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 253
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 107/230 (46%), Gaps = 29/230 (12%)
Query: 1 MSTIIGLFITILCIIGGF-YAMGGNPYILIQPFEIVIVAGAGLGGFVMA-NPLKVIKDSG 58
++ IIGL ++ ++G YA G P++ I F IV+V G V+A P V
Sbjct: 3 IAAIIGLIGAVVMVVGSMIYAGGVTPFVDIPSFFIVVV---GTAFIVLAMKPFPVFLGHF 59
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ ++F + T D +++ I M L +R + ++ ++P
Sbjct: 60 KAMSKVF------KPTRFDTNEVISI-MVELSNTARKDGIMALEG-------KAVPD--- 102
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F +++++ G + ++ L EI + A+ + PA+G+V
Sbjct: 103 -----PFFEKGLQLLVDGTDEAKLVKQL-KYEIKAMKVRHEAYQGAVKAWIDIGPAMGMV 156
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G ++G++ +GN++ PK +G A+ V+L TL G +++ + P+ ++++
Sbjct: 157 GTLIGLVLMLGNMT-DPKSIGPAMAVALLTTLYGALMANVIFAPILNKLE 205
>gi|78485927|ref|YP_391852.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78364213|gb|ABB42178.1| MotA/TolQ/ExbB family protein [Thiomicrospira crunogena XCL-2]
Length = 263
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
M + PA G++G ++G++ + ++ P +G + V+L TL G++++ + P +I
Sbjct: 157 MASAAPAFGMIGTLVGLVIMLNSMEGDPSKIGGGLAVALLTTLYGVLMAQLIFKPAARKI 216
Query: 228 KSTR-LKQHRLYIIVKKALIAYMNGA 252
+ + L+ +R +I+ + L+ G+
Sbjct: 217 EQKQDLEAYRNHILTEGILLMAEGGS 242
>gi|92113629|ref|YP_573557.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91796719|gb|ABE58858.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
Length = 299
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM---- 188
+++ N + EI +++ I + + M PA G++G ++G+I +
Sbjct: 137 LVIANTQDDEIHDVLRWRIARMRAREYAESQIFRTMATYAPAFGMLGTLIGLINMLEVIN 196
Query: 189 -GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL---------- 237
G+L+ ++G + V+L T GI+L+ L P+ +K R + RL
Sbjct: 197 GGDLT----VIGPRLAVALMSTFYGILLANLLFKPIA--VKLERRTEERLIEMHMVMEGV 250
Query: 238 YIIVKKALIAYMNGAIPQVAIEYG---RKVLPLSERPSIEIVAQE 279
++ K+ L +++ + E+ R P ++ P + QE
Sbjct: 251 MLVAKRRLPSFIEDTLHSFMAEHQDEIRGPAPRTDAPDADARKQE 295
>gi|254479610|ref|ZP_05092918.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Carboxydibrachium pacificum DSM 12653]
gi|214034453|gb|EEB75219.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Carboxydibrachium pacificum DSM 12653]
Length = 271
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ I + ++ F GG L+ +IV G +G + + L+ IK
Sbjct: 3 IATIVGIIIGVGSLVYAFTLEGGTIGSLLGVSAALIVFGGTIGATITSYSLEDIKKVPAL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++ F + ++ Y +++K L +R+E S E N
Sbjct: 63 LVKAFKDE---KENYMEIIKYFTYLAQK----ARSE---------GLLSLESEIESEEIN 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + + + +++ G+ I+ M+ +I + + K G P +GI+G
Sbjct: 107 KFDPILKECLELVVDGSDMEL-IKTTMENKIYMEDMQAKKEAGIFEAAGGYAPTMGIIGT 165
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS-TRLKQHRLYI 239
++G++ + ++S+ P+ LG AI ++ TL G+ + P+ ++K+ ++K +
Sbjct: 166 VMGLVHVLSSISE-PEKLGPAIAMAFIATLYGVSSANLFWLPIAQKLKNRAKIKTTEREL 224
Query: 240 IVKKAL 245
I++ +L
Sbjct: 225 ILEGSL 230
>gi|92117048|ref|YP_576777.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799942|gb|ABE62317.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
Length = 257
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGESLPA 174
+E NE F+ +R + G + +NL + + +++ E K Y AI G+ PA
Sbjct: 99 VETNE--PFLAKGIRFVADGYDLEFIRDNLERDRDNFLMHLDEGSKIYRAI---GDCAPA 153
Query: 175 IGIVGAILGIIKAMGNLSQSPKI---LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
G++G ++G+++ N++ K+ + TA+ +L G L+ + C P+ ++
Sbjct: 154 FGMIGTLIGMVQMFANMTDPSKLGPFMATALLATLYGALVANL----FCLPIADKLHGKL 209
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L + ++ ++ + P + E LP R
Sbjct: 210 LDEETNRTLIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|85715413|ref|ZP_01046395.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85697834|gb|EAQ35709.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 257
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGESLPA 174
+E NE F+ +R + G + +NL + + +++ E K Y AI G+ PA
Sbjct: 99 VETNE--PFLAKGIRFVADGYDLEFIRDNLERDRDNFLMHLDEGSKIYRAI---GDCAPA 153
Query: 175 IGIVGAILGIIKAMGNLSQSPKI---LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
G++G ++G+++ N++ K+ + TA+ +L G L+ + C P+ ++
Sbjct: 154 FGMIGTLIGMVQMFANMTDPSKLGPFMATALLATLYGALVANL----FCLPIADKLHGKL 209
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L + ++ ++ + P + E LP R
Sbjct: 210 LDEETNRTLIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|242279926|ref|YP_002992055.1| MotA3 [Desulfovibrio salexigens DSM 2638]
gi|242122820|gb|ACS80516.1| MotA3 [Desulfovibrio salexigens DSM 2638]
Length = 289
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M++V N EI++ + E+ + + M PA G+ G+++G+I + +
Sbjct: 112 MLLVDNFEEDEIKDCLKTEMSFFNMRRGESERVFQSMARFAPAFGVAGSVIGLIGLLMGI 171
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
+P ++ I V+ TL G+I S + P+ ++
Sbjct: 172 -DNPAMILKHIPVAFISTLYGVIFSNMIFAPMAETVR 207
>gi|205374482|ref|ZP_03227278.1| flagellar motor protein MotP [Bacillus coahuilensis m4-4]
Length = 274
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
+ GE PA G++G ++G++ + NL+ P LG + ++L T G +LS + PL+
Sbjct: 151 LDKAGEYAPAWGMIGTLIGLVLMLKNLN-DPTTLGPNMAIALLTTFYGSLLSNLVFIPLS 209
Query: 225 SQIKSTRLKQHRLYI-IVKKALIAYMNGAIPQVAIE----YGRKVLPLSERPSIEIVAQE 279
++ + R K+ Y I+ + +I +G P++ E + K E+ +E QE
Sbjct: 210 GKL-AVRTKKEIFYKQIIIEGVIGVQSGQNPKLLEEKLSVFLSKTDREKEQQKVEADGQE 268
Query: 280 VL 281
+
Sbjct: 269 AV 270
>gi|320354495|ref|YP_004195834.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
gi|320122997|gb|ADW18543.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
Length = 287
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+V N +I ++++ E+ + + + + PA GIVG++ G+I + +
Sbjct: 114 LVDNYEPQQIRDILNTEMYFFKLRREDSERVLRTIADFCPAFGIVGSVAGLIPMLAGIDD 173
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+ IL T + ++LT L G+IL P + ++ ++ L I+ + +IA +
Sbjct: 174 TGIILKT-VPLALTSILYGLILPNFFFIPFAANLRERTNQELLLQKIIMEGIIAIESELN 232
Query: 254 PQV 256
P V
Sbjct: 233 PTV 235
>gi|195953081|ref|YP_002121371.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
gi|195932693|gb|ACG57393.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
Length = 145
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 155 LYEKLKPYHAISHMG-ESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGT 209
L KLK I G S P +G++G+IL +I++ NL++ +P ++ +IG +L T
Sbjct: 50 LITKLKDSMWILDFGITSGPLLGLLGSILALIESFANLAERGISNPVVISKSIGFALVAT 109
Query: 210 LLGIILS------YSLCNPLTSQIK 228
GI L+ Y + N + IK
Sbjct: 110 AFGICLALWDLVFYKMLNDMIRNIK 134
>gi|224369951|ref|YP_002604115.1| MotA2 [Desulfobacterium autotrophicum HRM2]
gi|223692668|gb|ACN15951.1| MotA2 [Desulfobacterium autotrophicum HRM2]
Length = 256
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 157 EKLKPYHAI-----SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLL 211
E LK H I MG PA G++G ++G+++ + NL Q P +G A+ +L T
Sbjct: 130 ESLKMRHFIVQDVFRKMGIYSPAFGMLGTLIGLVQMLSNL-QEPSQIGPAMATALLTTFY 188
Query: 212 GIILSYSLCNPLTSQIKS 229
G ++S P+ ++K+
Sbjct: 189 GSLMSTMFFLPIAGKLKA 206
>gi|302338087|ref|YP_003803293.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
gi|301635272|gb|ADK80699.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
Length = 260
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 149 EEIDIILYE---KLKPYHAI-----SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I ILY +L+ HA+ G PA G++G ++G+I + NL P +G+
Sbjct: 122 ELIKSILYNDVGQLEERHAVGIKIFDDWGALTPAFGMIGTLIGLIAMLANLD-DPDAIGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+ +L TL G L+ L P ++++ R + RL
Sbjct: 181 GMATALITTLYGSFLANLLFIPFKNKLED-RDRAERL 216
>gi|213586190|ref|ZP_03368016.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 54
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVI 54
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K I
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGMGAFIVGNNGKAI 54
>gi|213421510|ref|ZP_03354576.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 59
Score = 38.9 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 5 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPS 36
>gi|289548705|ref|YP_003473693.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
gi|289182322|gb|ADC89566.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
Length = 249
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 86/222 (38%), Gaps = 29/222 (13%)
Query: 8 FITILCIIGGFYAM-------GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+T++ I+GG A+ G + L+QP VIV L ++ PL
Sbjct: 3 LLTLVGILGGLTALLIGAVLKGASLLFLLQPAAFVIVVPTTLFASLVTVPLSKFYLIVEG 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F D +L L + ++K E +D + I ++ ++
Sbjct: 63 LRMAFRKD---DDRSVQTKNILIDLAHTVRKEGMLALETKAEDITDPFIRKAVDLMVLGV 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ TF+ S E E EE I E K + ES P G+VGA
Sbjct: 120 DEATFV------------ESLETEVAKREEELEIAVEYWK------NAAESAPTFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNP 222
+ G++KA+ +L + + L I + T+ GI SY + P
Sbjct: 162 VFGLMKALQSLDNAQE-LAHGISAAFVATVYGITSSYLIFGP 202
>gi|315036633|gb|EFT48565.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
Length = 172
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDY 129
D D + +I +++ K S NE E ID+P++ F+ + T ENN + FI +Y
Sbjct: 107 DQQIDFYDIRHIQIHDFYKWSENEPEKPIDNPFSEVKFSEL-TEEENNAIDAFINEY 162
>gi|257417763|ref|ZP_05594757.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|158021643|gb|ABW08102.1| hypothetical protein [Enterococcus faecalis]
gi|257159591|gb|EEU89551.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
Length = 172
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDY 129
D D + +I +++ K S NE E ID+P++ F+ + T ENN + FI +Y
Sbjct: 107 DQQIDFYDIRHIQIHDFYKWSENEPEKPIDNPFSEVKFSEL-TEEENNAIDAFINEY 162
>gi|224532267|ref|ZP_03672899.1| chemotaxis protein MotA (Motility protein A) [Borrelia valaisiana
VS116]
gi|224511732|gb|EEF82138.1| chemotaxis protein MotA (Motility protein A) [Borrelia valaisiana
VS116]
Length = 260
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G+ G ++G++ +GNL + LG+
Sbjct: 122 EVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGTLIGLVALLGNL-EDKSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++ ++ + ++ + +++ +G P++
Sbjct: 181 SMAVALITTLYGTIMANLMFIPVQLKLEKIDSEEAAVKTMIIEGVLSIQSGDNPRI 236
>gi|188586028|ref|YP_001917573.1| MotA/TolQ/ExbB proton channel [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350715|gb|ACB84985.1| MotA/TolQ/ExbB proton channel [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 266
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
MG PA G+ G ++G++ + +L P +G + ++L TL G++ + + P+ +++
Sbjct: 148 MGTFSPAFGMSGTLIGLVSMLDDLD-DPDAIGPGMALALLTTLYGVVAANLIFLPIANKL 206
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+ + L ++ + +++ G P++ E + L R I +EV+ N
Sbjct: 207 EVKSNDEILLKEVMLEGMLSIQAGENPRIVEEKLKAFLAPKSRDEIAEEDEEVVDAN 263
>gi|291336866|gb|ADD96398.1| predicted flagellar motor component [uncultured organism
MedDCM-OCT-S09-C206]
Length = 254
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
PA+G++G ++G++ +GN+ PK +G A+ V+L TL G ++ L P+ +++
Sbjct: 151 PAMGMIGTLIGLVLMLGNMG-DPKSIGPAMAVALLTTLYGAFVANVLFAPIAKKLE 205
>gi|168186128|ref|ZP_02620763.1| chemotaxis protein PomA [Clostridium botulinum C str. Eklund]
gi|169295763|gb|EDS77896.1| chemotaxis protein PomA [Clostridium botulinum C str. Eklund]
Length = 268
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA G++G ++G+I+ + NL P LG + +L T G +++ + NP+ + +
Sbjct: 157 PAFGMLGTLIGLIQMLANLD-DPSNLGPGMSKALITTFYGSLIASLILNPMAANLMYKSS 215
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIE 259
K+ + ++ + ++A +G P++ E
Sbjct: 216 KECTIREMMLEGVLAIQSGVNPRIVEE 242
>gi|182418467|ref|ZP_02949761.1| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237666315|ref|ZP_04526300.1| chemotaxis protein MotA [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377849|gb|EDT75393.1| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237657514|gb|EEP55069.1| chemotaxis protein MotA [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 272
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G P G++G ++G+I+ +GNLS + I + +G +L T G +L+ + +P+ +
Sbjct: 154 GAFAPGFGMLGTLIGLIQMLGNLSDASTI-ASGMGKALITTYYGSLLANLIASPIAQNLS 212
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + + ++ + +IA +G P++ + L SER
Sbjct: 213 AKSAYEVNMREMMVEGIIAIQSGVNPRIVEDKLISYLSPSER 254
>gi|111115106|ref|YP_709724.1| flagellar motor rotation protein A [Borrelia afzelii PKo]
gi|216264071|ref|ZP_03436065.1| chemotaxis protein MotA (Motility protein A) [Borrelia afzelii
ACA-1]
gi|110890380|gb|ABH01548.1| flagellar motor rotation protein A [Borrelia afzelii PKo]
gi|215980115|gb|EEC20937.1| chemotaxis protein MotA (Motility protein A) [Borrelia afzelii
ACA-1]
Length = 260
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G+ G ++G++ +GNL + LG+
Sbjct: 122 EVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGTLIGLVALLGNL-EDKSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++ ++ + ++ + +++ +G P++
Sbjct: 181 SMAVALITTLYGTIMANLMFIPVQLKLEKIDSEEAAVKTMIIEGVLSIQSGDNPRI 236
>gi|270208355|ref|YP_003329133.1| hypothetical protein pBEE99p85 [Enterococcus faecalis]
gi|307289013|ref|ZP_07568970.1| hypothetical protein HMPREF9505_02384 [Enterococcus faecalis
TX0109]
gi|268309219|gb|ACY95604.1| hypothetical protein [Enterococcus faecalis]
gi|306500035|gb|EFM69395.1| hypothetical protein HMPREF9505_02384 [Enterococcus faecalis
TX0109]
gi|315146370|gb|EFT90386.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
Length = 171
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
AL D D + +I +++ K S NE E ID+P++ F+ + T ENN + FI +
Sbjct: 102 ALIGDQQIDFYDIRHIQIHDFYKWSENEPEKPIDNPFSEVKFSEL-TEEENNAIDAFINE 160
Query: 129 Y 129
Y
Sbjct: 161 Y 161
>gi|51894109|ref|YP_076800.1| flagellar motor protein MotA [Symbiobacterium thermophilum IAM
14863]
gi|51857798|dbj|BAD41956.1| flagellar motor protein MotA [Symbiobacterium thermophilum IAM
14863]
Length = 265
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
P +GI+G ++G+I MG LS+ P LG AI V+ TL G+ + P+ +IK+
Sbjct: 154 PTLGIMGTVMGLITIMGRLSE-PDTLGPAIAVAFLATLYGLGSANLFFLPMGYKIKA 209
>gi|332666532|ref|YP_004449320.1| hypothetical protein Halhy_4610 [Haliscomenobacter hydrossis DSM
1100]
gi|332335346|gb|AEE52447.1| hypothetical protein Halhy_4610 [Haliscomenobacter hydrossis DSM
1100]
Length = 262
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG------NLSQSPKI- 197
++D +++ + + Y + ++ + +P++G +G +LGI A+G + S+ P+I
Sbjct: 145 QVIDHQVEAMQEQSQSNYDILHYLAQGIPSLGFLGTVLGISGAIGKFYLATDFSKLPQIT 204
Query: 198 --LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS-TRLKQH 235
L A + LG+IL+Y ++ K TR++++
Sbjct: 205 SMLNIAFDTTFFSLFLGLILTYVFNRTQDNENKFYTRMREY 245
>gi|224534324|ref|ZP_03674902.1| chemotaxis protein MotA [Borrelia spielmanii A14S]
gi|224514426|gb|EEF84742.1| chemotaxis protein MotA [Borrelia spielmanii A14S]
Length = 261
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 149 EEIDIILYEKLKPYHAISHMGESL--------PAIGIVGAILGIIKAMGNLSQSPKILGT 200
E I +LY +L +G L PA G+ G ++G++ +GNL + LG+
Sbjct: 122 EVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGTLIGLVALLGNL-EDKSALGS 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
++ V+L TL G I++ + P+ +++ ++ + ++ + +++ +G P++
Sbjct: 181 SMAVALITTLYGTIMANLMFIPVQLKLEKIDSEEAAVKTMIIEGVLSIQSGDNPRI 236
>gi|187250855|ref|YP_001875337.1| biopolymer transport protein [Elusimicrobium minutum Pei191]
gi|186971015|gb|ACC98000.1| Biopolymer transport protein [Elusimicrobium minutum Pei191]
Length = 209
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 130 MRMIIVGNARSYEIENLMDEEID---IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
++ ++ N + +++ DE ID +L++KL ++ +G + P IG+ G +LG+++
Sbjct: 85 IKTLLTSNRQGANLKDYSDEVIDWEVTLLHKKLP---VLATLGSTTPFIGLFGTVLGVMR 141
Query: 187 AMGNL------SQSPKILGTAIGVSLTGTLLGIILSYSLC---NPLTSQI 227
A +L + P ++ I +L T G+ ++ N T+QI
Sbjct: 142 AFADLAAMTAATAGPSVVAKGIAEALINTAAGLFVAVPAVIAYNYFTTQI 191
>gi|326791533|ref|YP_004309354.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
gi|326542297|gb|ADZ84156.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
Length = 260
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSL 219
K + +I+ +G PA G++G ++G+I + NL+ P LG + V+L T G +++ +
Sbjct: 144 KFWDSIAELG---PAWGMIGTLIGLIIMLDNLND-PSTLGPKMAVALVTTFYGSMIANLV 199
Query: 220 CNPLTSQIKSTRLKQHRLYI-IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
P+++++ S R L+ ++ + L++ G P+V E + L R ++
Sbjct: 200 ATPISNKL-SLRSNDEILHKQVMVEGLLSIQAGENPRVIEEKLKAFLSPGTRKVFDV 255
>gi|258510422|ref|YP_003183856.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477148|gb|ACV57467.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 265
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 117/274 (42%), Gaps = 30/274 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + I ++GG+ GN LIQP ++IV G LG ++++ LKV
Sbjct: 3 LATVLGLLLGIGGLLGGYILDKGNIAALIQPSAMMIVFGGTLGATMLSSSLKV------- 55
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE-N 119
+ + K L I + K+ R + ID + + +L
Sbjct: 56 --------------FLSLPKYLRIAFFAPKRDPRAQ----IDQLVDLAVMARREGILALE 97
Query: 120 NELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ + +F +MR +IV +++++ E+ I + G P +G
Sbjct: 98 DHVNSFDDAFMRNGVRLIVDGIDPELVKDMLQTELAHIEERHEVGINMFEAAGGFAPTMG 157
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
I+G ++G++ +G+LS LG I + TL G+ + P+ +++++ ++
Sbjct: 158 IIGTVMGLVHVLGSLSDVSS-LGPEIATAFIATLYGVASANIFWLPVANKLRARSQEEML 216
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ G P V + L S+R
Sbjct: 217 EREMTLEGILSIQAGENPNVLRQKLLSFLAASDR 250
>gi|118443368|ref|YP_877985.1| chemotaxis motA protein [Clostridium novyi NT]
gi|118133824|gb|ABK60868.1| chemotaxis motA protein [Clostridium novyi NT]
Length = 269
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
PA G++G ++G+I+ + NL P LG + +L T G +++ + NP+ + +
Sbjct: 157 PAFGMLGTLIGLIQMLANLD-DPGNLGPGMSKALITTFYGSLIASLILNPMAANLMYKSS 215
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIE 259
K+ + ++ + ++A +G P++ E
Sbjct: 216 KECTIREMMLEGVLAIQSGVNPRIVEE 242
>gi|229547292|ref|ZP_04436017.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|229307627|gb|EEN73614.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|315167617|gb|EFU11634.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
Length = 172
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDY 129
D D + +I ++ K S NE E ID+P++ F+ + T ENN + FI +Y
Sbjct: 107 DQQIDFYDIRHIQIHEFYKWSENEPEKPIDNPFSEVKFSEL-TEEENNAIDAFINEY 162
>gi|307274780|ref|ZP_07555946.1| hypothetical protein HMPREF9521_00393 [Enterococcus faecalis
TX2134]
gi|306508481|gb|EFM77585.1| hypothetical protein HMPREF9521_00393 [Enterococcus faecalis
TX2134]
Length = 129
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDY 129
D D + +I ++ K S NE E ID+P++ F+ + T ENN + FI +Y
Sbjct: 64 DQQIDFYDIRHIQIHEFYKWSENEPEKPIDNPFSEVKFSEL-TEEENNAIDAFINEY 119
>gi|331663388|ref|ZP_08364298.1| chemotaxis protein MotB [Escherichia coli TA143]
gi|331059187|gb|EGI31164.1| chemotaxis protein MotB [Escherichia coli TA143]
Length = 366
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
VK L++ +NG P +A+E+GRK L SERPS
Sbjct: 4 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSF 36
>gi|77164351|ref|YP_342876.1| flagellar motor protein PomA [Nitrosococcus oceani ATCC 19707]
gi|254434685|ref|ZP_05048193.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
gi|76882665|gb|ABA57346.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|207091018|gb|EDZ68289.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
Length = 256
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+G+ PA+G++G ++G+++ + ++ PK +G A+ V+L TL G +++ + P ++
Sbjct: 146 IGDVAPAMGMIGTLIGLVQMLSSMD-DPKKIGPAMAVALLTTLYGAMIANMVALPFADKL 204
Query: 228 KSTRLKQHRL 237
+ R + RL
Sbjct: 205 -ALRSNEERL 213
>gi|255527287|ref|ZP_05394167.1| MotA/TolQ/ExbB proton channel [Clostridium carboxidivorans P7]
gi|296188355|ref|ZP_06856747.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Clostridium carboxidivorans P7]
gi|255509025|gb|EET85385.1| MotA/TolQ/ExbB proton channel [Clostridium carboxidivorans P7]
gi|296047481|gb|EFG86923.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Clostridium carboxidivorans P7]
Length = 264
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ L FI +++++ G + ++++ E++ K + G P +GI+
Sbjct: 103 DPNLDPFIKKGLQLVVDG-VDPQAVRSILELELESTSERHKKGAAIFAQAGGYAPTLGII 161
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G ++G++ + +LS P LG I TL G+ + L PL +++K+ K+
Sbjct: 162 GTVMGLVHILADLSD-PNTLGPKIASGFLATLYGLSSANLLFLPLATRLKALDEKE 216
>gi|163857258|ref|YP_001631556.1| putative outer membrane proton channel [Bordetella petrii DSM
12804]
gi|163260986|emb|CAP43288.1| putative outer membrane proton channel [Bordetella petrii]
Length = 301
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISH--------MGESLPAIGIVGAILGIIKAMGNL-SQ 193
I++ +++I +L ++ A H M PA G++G ++G+I M L S
Sbjct: 116 IDHTPEDQIIELLQWRIARLRAREHAEAQMFRIMAGFAPAFGMLGTLVGLINLMTVLGSG 175
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G + V+L T GI+L+ +C P+ +K R + RL ++
Sbjct: 176 DMALIGQQLAVALMTTFYGILLANLVCKPIA--VKLERRTEQRLMLM 220
>gi|146341586|ref|YP_001206634.1| putative chemotaxis protein MotA [Bradyrhizobium sp. ORS278]
gi|146194392|emb|CAL78417.1| putative chemotaxis protein MotA (Flagellar motor component)
[Bradyrhizobium sp. ORS278]
Length = 257
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 114 PTVLENNELTT-FICDYMRMIIVGNARSYEIENLMDEEIDIILY--EKLKPYHAISHMGE 170
P LE E F+ +R + G + +NL + + +++ E K Y AI G+
Sbjct: 93 PVGLEKVETDEPFLAKGIRYVADGYDLEFIRDNLERDRDNFLMHLDEGSKIYRAI---GD 149
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKI---LGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
PA G++G ++G+++ N++ K+ + TA+ +L G L+ + C P+ ++
Sbjct: 150 CAPAFGMIGTLIGMVQMFANMTDPSKLGPFMATALLATLYGALVANL----FCLPIADKL 205
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L + ++ ++ + P + E LP R
Sbjct: 206 HGKLLDEETNRTLIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|194288710|ref|YP_002004617.1| biopolymer transport transmembrane protein [Cupriavidus taiwanensis
LMG 19424]
gi|193222545|emb|CAQ68548.1| BIOPOLYMER TRANSPORT TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis
LMG 19424]
Length = 206
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY-HAISHMGESLP 173
T+ +N+ L + +R +++ S + + EE ++ +L+ Y +A+ + P
Sbjct: 63 TLEQNSPLGRVLAAGLRHVVLQPHTSRDAAKDVVEEAGRVVAHELERYLNALGTIASVAP 122
Query: 174 AIGIVGAILGIIKAMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
+G++G ++G+I+ GN SP+ L I V+L T G+I++
Sbjct: 123 LMGLLGTVIGMIEIFGNQGGTGTSPEQLAHGISVALYNTAFGLIVA 168
>gi|283850491|ref|ZP_06367779.1| hypothetical protein DFW101DRAFT_0349 [Desulfovibrio sp. FW1012B]
gi|283574062|gb|EFC22034.1| hypothetical protein DFW101DRAFT_0349 [Desulfovibrio sp. FW1012B]
Length = 87
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANP 50
M + G+F+ + I G+Y GG +L+QP E +I+ GA LG A P
Sbjct: 1 MIVLAGVFVVLASICLGYYLEGGIFSVLVQPAEWLIIFGAALGPCSSAPP 50
>gi|300114850|ref|YP_003761425.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299540787|gb|ADJ29104.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 256
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+ PA+G++G ++G+++ + ++ PK +G A+ V+L TL G +++ + P ++
Sbjct: 147 GDVAPAMGMIGTLIGLVQMLSSMD-DPKKIGPAMAVALLTTLYGAMIANMVALPFADKL- 204
Query: 229 STRLKQHRL 237
+ R + RL
Sbjct: 205 ALRSNEERL 213
>gi|328543882|ref|YP_004303991.1| MotA/TolQ/ExbB proton channel [polymorphum gilvum SL003B-26A1]
gi|326413626|gb|ADZ70689.1| MotA/TolQ/ExbB proton channel [Polymorphum gilvum SL003B-26A1]
Length = 239
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 22/151 (14%)
Query: 90 KKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDE 149
+ G R E I+ P ++ + MR+ +VG+ +IE+ +
Sbjct: 61 RAGRRREALGSIEAPVSAA--------------EEAVATAMRLRLVGSVSRSDIEDEIGR 106
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGV 204
I L+ A+ +G+ P +G+ G +LG+I A L S P L I V
Sbjct: 107 LAVIRLHSLQGGLKALDAIGQLAPLLGLFGTVLGMIAAFQELQSAGNSVDPSALAGGIWV 166
Query: 205 SLTGTLLGIILSYSLCNPLT---SQIKSTRL 232
+L T G+ ++ + LT S+I+ R+
Sbjct: 167 ALLTTAAGLAVAMPVSIVLTFFESRIECERV 197
>gi|157164025|ref|YP_001466587.1| permease [Campylobacter concisus 13826]
gi|112800734|gb|EAT98078.1| chemotaxis protein PomA [Campylobacter concisus 13826]
Length = 255
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
NNE F+ + M + GN I L++ +ID +G A+G++
Sbjct: 101 NNESNQFLKKGLSMAVDGN-EPDAIRALLEIDIDQTSTRHANNIKIFEQVGGFAGAMGMI 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL- 237
G ++G++ + N+S P +G ++ V+L TL G ++ + +P+ + I S R L
Sbjct: 160 GTLIGLVAMLLNMSD-PSAIGPSMAVALLTTLYGAMIGNIIGSPV-ANILSIRDADEALE 217
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ + ++A G P+ LP +R S
Sbjct: 218 KQVILEGIMAIQAGDNPRTLEAKLLAFLPPKDRKS 252
>gi|219670207|ref|YP_002460642.1| MotA/TolQ/ExbB proton channel [Desulfitobacterium hafniense DCB-2]
gi|219540467|gb|ACL22206.1| MotA/TolQ/ExbB proton channel [Desulfitobacterium hafniense DCB-2]
Length = 257
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 26/230 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST++G+ I +I GF GG+ L +IV G G + PLK +K
Sbjct: 3 ISTLLGIIIGFGALILGFILEGGHVSSLFLLPPAIIVFGGTFGAVFASFPLKEMKKLSTW 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F K+ G L+ L+ +K R +
Sbjct: 63 LKIAFTDKSYG------TLEAYETLIRFAEKARREGLLSL--------------EQELEE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY--HAISHMGESLPAIGIV 178
F M+++I G E L E +I + EK G P +GI+
Sbjct: 103 VEDRFTRQGMQLVIDGTDPDITREIL---ESNIAVMEKRHKVGISVFEAAGGYSPTLGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G ++G++ +GNL+ P L +I + TL G+ + L P+ +++K
Sbjct: 160 GTVMGLVHVLGNLTD-PDSLSKSIAGAFLATLYGVAFANLLYLPIATKLK 208
>gi|289612399|emb|CBI60114.1| unnamed protein product [Sordaria macrospora]
Length = 79
Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IG + I + GGF GG+ P + P E++I+ GA +G ++ N + +K G
Sbjct: 1 MFPAIGFVVLIAMVFGGFAFTGGDLGPVLHALPHEMLIIGGAAVGALIIGNSGRELKGMG 60
Query: 59 VSLLEIFGYKALGQDTYCD 77
+++ + Y D
Sbjct: 61 GGFMKVLKGPKYKKQDYLD 79
>gi|159040815|ref|YP_001540067.1| hypothetical protein Cmaq_0229 [Caldivirga maquilingensis IC-167]
gi|157919650|gb|ABW01077.1| hypothetical protein Cmaq_0229 [Caldivirga maquilingensis IC-167]
Length = 435
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 174 AIGIVGAILG----IIKAMGNLSQSPKIL---GTAI--GVSLTGTLLGIILSYSLCNPLT 224
A GIV IL I+ + SP L A+ G + G + +LS S+ + +
Sbjct: 68 AQGIVRTILKSGKPILYVARTMEGSPNFLIDVADAVREGYPILGVVTEDVLSKSVIDKVK 127
Query: 225 SQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
I ++++ R+ ++ + LI+YMN A P A E R V L R + + ++ ++
Sbjct: 128 YLIALDKIRRSRVLLVTARNLISYMNWAFPN-ATEVSRAVAELQRRFGLTFIFMDLKEF 185
>gi|189426713|ref|YP_001953889.1| tonB-system energizer ExbB [Geobacter lovleyi SZ]
gi|189422972|gb|ACD97369.1| tonB-system energizer ExbB [Geobacter lovleyi SZ]
Length = 144
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIG 203
+E+++ L KL H I+ +G + P IG++G +LGI+ + Q + KI+ T +
Sbjct: 46 KELELALTRKL---HIIATVGSNAPYIGLLGTVLGIMLTFSTMGQQGFVDATKIM-TGLA 101
Query: 204 VSLTGTLLGIIL---SYSLCNPLTSQIKSTRL 232
++L T +G+++ + ++ N L Q K T L
Sbjct: 102 LALKATAIGLVVAIPAVTIYNILVRQAKETLL 133
>gi|313905137|ref|ZP_07838506.1| MotA/TolQ/ExbB proton channel [Eubacterium cellulosolvens 6]
gi|313470040|gb|EFR65373.1| MotA/TolQ/ExbB proton channel [Eubacterium cellulosolvens 6]
Length = 266
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 116/253 (45%), Gaps = 35/253 (13%)
Query: 34 IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKG- 92
++IV G + G + P++++KD + F + G D V K++ + M + G
Sbjct: 34 LLIVVGGTIAGLIACYPIRILKDVPKHIGICF--RGKGYDVPAVVDKIVELAMVARQSGL 91
Query: 93 -SRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEI 151
+ E I +P+ ++ +++ N+ D +R ++ +++++M
Sbjct: 92 LALEEKAGEITEPFFK---AAVLMIVDAND-----PDKVRFVL-----ERQLDDMMTR-- 136
Query: 152 DIILYEKLKPYHAISHMGESL-PAIGIVGAILGIIKAMGNLSQS----PKILGTAIGVSL 206
+E+ K + G +L PA G++G ++G++ + + S LG +GV+L
Sbjct: 137 ----HEEAKGLYI---KGSALAPAFGMIGTLVGLVNMLKGMDLSGGGGASTLGQDMGVAL 189
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI-IVKKALIAYMNGAIPQVAIEYGRKVL 265
T G LS + +P+ ++ S R + LY + + +I+ +G P+ E+ +
Sbjct: 190 ITTFYGSALSNVIFHPIAQKL-SVRENEEVLYCSTIIEGVISIQSGENPKYIREH--LLA 246
Query: 266 PLSERPSIEIVAQ 278
L + ++++AQ
Sbjct: 247 SLKTKQQLKLLAQ 259
>gi|330883820|gb|EGH17969.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 113
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
++V A I +++ E+D I E ++ MG P +GI+GA++G+I MGN
Sbjct: 48 LLVDGAEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTVGIIGAVMGLIHVMGN 105
Query: 191 LSQSPKILG 199
L+ P LG
Sbjct: 106 LA-DPSQLG 113
>gi|308067926|ref|YP_003869531.1| membrane protein involved in the export of O-antigen and teichoic
acid [Paenibacillus polymyxa E681]
gi|305857205|gb|ADM68993.1| Membrane protein involved in the export of O-antigen and teichoic
acid [Paenibacillus polymyxa E681]
Length = 447
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 190 NLSQSPK----ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
+L + PK +LGTA+ + L GTLL I+LSYS + L + S RL
Sbjct: 76 DLVKDPKDEHELLGTAVLLKLVGTLLAIVLSYSFISLLRPEDSSVRL 122
>gi|15893596|ref|NP_346945.1| chemotaxis motility protein A, gene motA [Clostridium
acetobutylicum ATCC 824]
gi|15023147|gb|AAK78285.1|AE007545_2 Chemotaxis motility protein A, gene motA [Clostridium
acetobutylicum ATCC 824]
gi|325507716|gb|ADZ19352.1| Chemotaxis motility protein A, gene motA [Clostridium
acetobutylicum EA 2018]
Length = 262
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 95/228 (41%), Gaps = 20/228 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +I+ + + ++ +I GF GG+ LI +IV G +G + P+ IK G S
Sbjct: 1 MDSIVFVLVALVSVIVGFIIDGGSVINLIHVSPAIIVFGGTIGAVGTSFPIGDIKKLG-S 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++++ K L L + +R E SI ++ +
Sbjct: 60 IVKVALSKPKSD------LPALIAYFKQIAFKTRKEG------------LLSIEEMISDE 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI ++M++ G +++ ++ +++I G P +GI+G
Sbjct: 102 SVDPFIKKGLQMVVDG-IEPQTVKDTLELSVELIEERHNMGASIFQAAGGYAPTLGIIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
+ ++ + NLS LG +I + TL GI + + P+ +++K
Sbjct: 161 VCSLVVVLANLSSDTSQLGESISSAFLATLYGISSANLVYLPIANKLK 208
>gi|163781626|ref|ZP_02176626.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
gi|159882846|gb|EDP76350.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
Length = 240
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 44/223 (19%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
+GG+P I + IV G G+ + PLK S+ + F +K + ++
Sbjct: 8 VGGSPAAFINIPSLFIVVGGGMAAALGGFPLKDFIRGVSSIKDAFLWKP---PDALETVE 64
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
L + +++ E+ I+ Y E + D +RM++ G
Sbjct: 65 FLSEIATKVRREGILALESEIELYY---------------ERDPLLGDMIRMLVDG---- 105
Query: 141 YEIENL----------MDEEI--DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
E+E + +D+++ ++ ++EKL + PA G++G ++G+I+ +
Sbjct: 106 LELEEIKISAEGAIAQVDDKLGTNVAVWEKL---------ADLFPAFGMIGTLVGLIQML 156
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
NL+ P LG + V+L TL G IL+ + P+++++K +
Sbjct: 157 KNLN-DPSALGPGMAVALITTLYGAILANAFAIPISNKLKKIK 198
>gi|89895941|ref|YP_519428.1| hypothetical protein DSY3195 [Desulfitobacterium hafniense Y51]
gi|89335389|dbj|BAE84984.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 804
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 96 ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIIL 155
+ E ID P I T I T+ E +L MR+++ G +R +E + DE
Sbjct: 51 QKETEIDSPDPDDIHT-IGTLAEIKQLLKLPGGTMRVLVEGKSRGKILEFITDEP----- 104
Query: 156 YEKLKPYHAISHMGESLPAI-GIVGAILGIIKAMGNLSQS--PKILGTAIGVSLTGTLLG 212
Y K++ A + E+ P I + ++ + LS+ + LGT +GV+ +G L
Sbjct: 105 YFKVRVEEAEEGVKENTPEIDALTHGVIHQFEEYAKLSKKVPQETLGTVLGVNDSGRLAD 164
Query: 213 IILSY 217
I+ S+
Sbjct: 165 IVASH 169
>gi|304316145|ref|YP_003851290.1| PTS system transcriptional activator [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777647|gb|ADL68206.1| PTS system transcriptional activator [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 899
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 104 PYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKL---- 159
P N T IPT +N + I D +R + +IE++++++I ++++
Sbjct: 368 PTNET--EEIPTASNDNSIYEIINDRLRQLKAKGISDIDIESILEKDIAKYFHKQIYGIT 425
Query: 160 --KPYHAISH-MGESLPAIGIVGAILGIIKAM--GNLSQSPKILGTAIGVSLTGTLLGII 214
K + H +GE + I I I ++ + LSQ+ TA+ + L + +
Sbjct: 426 EEKNKQNLIHILGEDI--INITDRIAELVSELLGKELSQNSY---TALALHLNTLIERVN 480
Query: 215 LSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ + NP S+IK ++ + + KK + Y+N +IP+
Sbjct: 481 KNKPIVNPQLSKIKQLYPREFEVAVEAKKIIEKYLNVSIPE 521
>gi|330883800|gb|EGH17949.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 116
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYE--KLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
++V A I +++ E+D I E ++ MG P +GI+GA++G+I MGN
Sbjct: 52 LLVDGAEPAAIRSIL--EVDFITQETRDIQAAKVFESMGGYAPTVGIIGAVMGLIHVMGN 109
Query: 191 LSQSPKI 197
L+ ++
Sbjct: 110 LADPSQL 116
>gi|254463495|ref|ZP_05076911.1| chemotaxis protein MotA [Rhodobacterales bacterium HTCC2083]
gi|206680084|gb|EDZ44571.1| chemotaxis protein MotA [Rhodobacteraceae bacterium HTCC2083]
Length = 239
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 117 LENNEL-TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
LE E+ F M++++ G + ++ L ++EI + + + + PA+
Sbjct: 81 LEGQEVPDKFFGKGMQLLVDGADETKLVQQL-NQEIKSMKGRHEANQNVVKAWIDLAPAM 139
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G++G ++G++ +GN+ + K +G ++ V+L T+ G IL+ + P+ ++++
Sbjct: 140 GMIGTLIGLVLMLGNM-EDVKSIGPSMAVALLTTMYGAILANVIFGPMLTKLE 191
>gi|53805154|ref|YP_113182.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53758915|gb|AAU93206.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 218
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLGIILSYSLC 220
++ +G + P +G+ G + GI+ A+ ++S+S K ++ IG +L T +GI ++
Sbjct: 124 LASIGSTAPFVGLFGTVWGIMHALQDISRSGKASLEVVAGPIGEALIATAIGIAVAVPAV 183
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKAL 245
++ +R KQ L I + L
Sbjct: 184 LAYNFLMRQSRRKQQALEIFAEDFL 208
>gi|227326901|ref|ZP_03830925.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 53
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMAN 49
M I+G + + I+GG+ +GG L QP E++I+ GA +G F++ N
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAAVGAFIVGN 49
>gi|223040123|ref|ZP_03610403.1| chemotaxis protein PomA [Campylobacter rectus RM3267]
gi|222878600|gb|EEF13701.1| chemotaxis protein PomA [Campylobacter rectus RM3267]
Length = 236
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMD---EEIDIILYEKLKPYHAISHMGESLPAI 175
NNE F+ + M + GN I L++ E+ + +K + IS S+
Sbjct: 81 NNETDPFLKKGLSMAVDGN-EPDAIRTLLEIDMEQSSSRHNDNIKIFDQISGFAGSM--- 136
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G++ + N+S P +G ++ V+L TL G ++ L P+ + + ++
Sbjct: 137 GMIGTLIGLVAMLMNMSD-PSAIGPSMAVALITTLYGAMIGNILGAPVANILGIRDKDEN 195
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+++ + ++A G P+ LP ER S
Sbjct: 196 TAKVLMLEGIMAIQAGDNPRTLEMKLLSFLPPKERVS 232
>gi|53802322|ref|YP_112972.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53756083|gb|AAU90374.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 218
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLGIILSYSLC 220
++ +G + P +G+ G + GI+ A+ ++S+S K ++ IG +L T +GI ++
Sbjct: 124 LASIGSTAPFVGLFGTVWGIMHALQDISRSGKASLEVVAGPIGEALIATAIGIAVAVPAV 183
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKAL 245
++ +R KQ L I + L
Sbjct: 184 LAYNFLMRRSRRKQQALEIFAEDFL 208
>gi|209808938|ref|YP_002264476.1| biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
gi|208010500|emb|CAQ80866.1| biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
Length = 451
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 173 PAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC---NPLTS 225
P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L N L+S
Sbjct: 358 PMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLTHNILSS 417
Query: 226 QIKSTR--LKQHRLYIIVKKA 244
Q +S R L++ L ++ ++A
Sbjct: 418 QAESIRTILEKQGLSLVAEQA 438
>gi|295111384|emb|CBL28134.1| Flagellar motor component [Synergistetes bacterium SGP1]
Length = 239
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 105/255 (41%), Gaps = 22/255 (8%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
A GGN I ++I G +G +++NP +K G L F + ++
Sbjct: 2 AGGGNFGAYIDVPSMMITIGGAVGATILSNPSDRLKAIGGGLKSAFVSH---EPNLVGMV 58
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
+++ ++ E+ + + N + SI V++ + + +R I
Sbjct: 59 QMIVSFAEKTRREGLLALESDVAELDNEFLKKSIQLVVDGTD-----PELVRAI------ 107
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
+D EI ++ + E P+ G++G ++G+I +GNL+ LG
Sbjct: 108 -------LDTEIGVLEDRHSANKSVFDTLAEFAPSYGMIGTLVGLIAMLGNLADVSS-LG 159
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
+ V+L T+ G +++ P+ ++ + ++ ++ + ++A G P++ E
Sbjct: 160 PNMAVALITTMYGSMMANMFGIPIGKKLAARSAQEVVAMELMVEGILAIQAGENPRIVEE 219
Query: 260 YGRKVLPLSERPSIE 274
+ LP R S +
Sbjct: 220 KLKVYLPPRLRSSFD 234
>gi|113866635|ref|YP_725124.1| biopolymer transport channel protein [Ralstonia eutropha H16]
gi|113525411|emb|CAJ91756.1| biopolymer transport channel protein [Ralstonia eutropha H16]
Length = 239
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY-HAISHMGESLP 173
T+ +N+ L + +R +++ S + + EE ++ +L+ Y +A+ + P
Sbjct: 96 TLEQNSPLGRVLAAGLRHVVLQPHTSRDAAKDVVEEAGRVVAHELERYLNALGTIASVAP 155
Query: 174 AIGIVGAILGIIK---AMGNLSQSPKILGTAIGVSLTGTLLGIILS 216
+G++G ++G+I+ + G SP+ L I V+L T G+I++
Sbjct: 156 LMGLLGTVIGMIEIFGSQGGTGASPEQLAHGISVALYNTAFGLIVA 201
>gi|317051550|ref|YP_004112666.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316946634|gb|ADU66110.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 255
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT 224
++ +G P++G++G ++G++ AM P +G A+ ++L TL G +++ P+
Sbjct: 145 LNSIGMFAPSMGMIGTLIGLV-AMLQTMDDPSTIGPAMAIALLTTLYGSMIANMFALPVA 203
Query: 225 SQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ ++ + IV +++ G P++ + LP S+R +
Sbjct: 204 GKLAERSQEELLVKEIVIMGIMSIQAGDNPRIVEQKLNAFLPPSQRKT 251
>gi|188588451|ref|YP_001920388.1| hypothetical protein CLH_0993 [Clostridium botulinum E3 str. Alaska
E43]
gi|188498732|gb|ACD51868.1| conserved hypothetical protein [Clostridium botulinum E3 str.
Alaska E43]
Length = 202
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 96 ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIIL 155
E N I P+N I I ++ NNEL I D II+ + +I+ +++E+I+++
Sbjct: 102 EKINFIPAPFNMMIKNYIDEMI-NNELNPIINDIYNTIIIKSKEKIDIQKIVEEKINLLD 160
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILG 183
KL+ IS + L I I+G ILG
Sbjct: 161 LNKLESI-IISVAKKELKHIEILGFILG 187
>gi|317407353|gb|EFV87319.1| outer membrane proton channel [Achromobacter xylosoxidans C54]
Length = 288
Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 42/238 (17%), Positives = 95/238 (39%), Gaps = 30/238 (12%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG + +L ++ NP + + IV G +A PL
Sbjct: 4 STVIGAVVGLLTLVIVIALAATNPGMYFNLPGLAIVLGGTCAALFIAYPLS--------- 54
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYN-STIFTSIPTVLENN 120
+V++ ++ L+ + + +++ + I++ N + ++ +
Sbjct: 55 ---------------EVMR-VFKLVVTVFRSDQHDQQRDIEELVNMAQLWMNTDVHKVEQ 98
Query: 121 ELTTFICDYMR---MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
EL ++R +I+ N +I L+ + + ++ M PA G+
Sbjct: 99 ELKKVSNPFLRTGVQLIIDNTPEDQIIELLQWRVARLKAREMAEAQMFRVMATFAPAFGM 158
Query: 178 VGAILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
+G ++G+I M L S +G + + L T GI+L+ +C P+ +++ ++
Sbjct: 159 LGTLVGLINLMSVLGDGSMTTIGQQLAIGLMTTFYGILLANLVCKPIAVKLERRTARR 216
>gi|311106777|ref|YP_003979630.1| MotA/TolQ/ExbB proton channel family protein 2 [Achromobacter
xylosoxidans A8]
gi|310761466|gb|ADP16915.1| MotA/TolQ/ExbB proton channel family protein 2 [Achromobacter
xylosoxidans A8]
Length = 296
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I+ N +I L+ + + + M PA G++G ++G+I M L
Sbjct: 114 LIIDNTPEDQIIELLQWRVARLRAREQAEAQMFRVMATFAPAFGMLGTLVGLINLMSVLG 173
Query: 193 Q-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
S +++G + + L T GI+L+ +C P+ +++ ++
Sbjct: 174 DGSMQMIGQQLAIGLMTTFYGILLANLVCKPIALKLERRTARR 216
>gi|323705099|ref|ZP_08116675.1| PTS system transcriptional activator [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535525|gb|EGB25300.1| PTS system transcriptional activator [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 906
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 112 SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKL------KPYHAI 165
IPT +N + I D +R + +IE++++++I ++++ K +
Sbjct: 381 EIPTASNDNSIYEIINDRLRQLKAKGISDIDIESILEKDIAKYFHKQIYGITEEKNKQNL 440
Query: 166 SH-MGESLPAIGIVGAILGIIKAM--GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNP 222
H +GE + I I I ++ + +LSQ+ TA+ + L + + + + NP
Sbjct: 441 IHILGEDI--ISITDRIAELVSELLGKDLSQNSY---TALALHLNTLIERVNKNKPIVNP 495
Query: 223 LTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
S+IK ++ + + KK + Y+N +IP+
Sbjct: 496 QLSKIKQLYPREFEVAVEAKKIIEKYLNVSIPE 528
>gi|114320553|ref|YP_742236.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114226947|gb|ABI56746.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
Length = 267
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
+GE+ PA G++G ++G+++ + +L P +G + +L TL G + + + P+ ++
Sbjct: 146 IGEAAPAFGMIGTLVGLVQMLAHLD-DPAAIGPGMATALLTTLYGAMFAQLVALPIADKL 204
Query: 228 K 228
+
Sbjct: 205 E 205
>gi|189235720|ref|XP_966631.2| PREDICTED: similar to glucose dehydrogenase [Tribolium castaneum]
Length = 742
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 21/107 (19%)
Query: 32 FEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKK 91
F+ V++ GAG GG V+AN L + + + +LE GY G D + D+ + + + +
Sbjct: 176 FDFVVI-GAGAGGTVVANRLSEVANWNILVLEAGGY---GND-FSDIPNMYFPIQF---- 226
Query: 92 GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+H + YNST T+ LEN+ +C Y R +G +
Sbjct: 227 -------SHFNWGYNSTPQTTACLGLENH-----VCLYPRGKGIGGS 261
>gi|187932462|ref|YP_001885052.1| chemotaxis protein MotA [Clostridium botulinum B str. Eklund 17B]
gi|187720615|gb|ACD21836.1| chemotaxis protein MotA [Clostridium botulinum B str. Eklund 17B]
Length = 271
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
S G P G++G ++G+I+ + NL+ S I + +G +L T G +++ +P+
Sbjct: 153 SAWGAFAPGFGMLGTLIGLIQMLANLTDSSTI-ASGMGKALITTFYGSLIANIFASPIAQ 211
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+ + K+ + ++ + +++ +G P++
Sbjct: 212 NLNNKSQKEVAIKEMMLEGILSIQSGVNPRI 242
>gi|261856273|ref|YP_003263556.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
gi|261836742|gb|ACX96509.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
Length = 272
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 101/244 (41%), Gaps = 32/244 (13%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T++G+F +IG + + P + +V G + +++ PL + + +
Sbjct: 4 ATLLGIFGGFGIVIGAIFLSSNHVSDFFSPTSLFLVLGGTIAATLISYPLHEV----LRV 59
Query: 62 LEIFGYKALGQDTYC--DVLKLLYI--LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+F + Y D+ +L+ + L + + +E I++P
Sbjct: 60 FRVFTIVLRNERLYTERDIAELVDVAKLKFQGQINRADEKLTKINNP------------- 106
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F+ M+M++ G A + +I L+ I + + M PA G+
Sbjct: 107 -------FLRTGMQMVLDG-ASNEDIMTLLQWRIGRMRARERAEAQIFRTMAAFAPAFGM 158
Query: 178 VGAILGIIKAMGNLSQSP-KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
+G +LG+I + + + +G + ++L TL GI+LS + P+ +K R + R
Sbjct: 159 LGTLLGLINMLHAMDAAHFADIGVNMALALITTLYGILLSNMIFKPIA--LKLERRTEQR 216
Query: 237 LYII 240
+ ++
Sbjct: 217 VMVM 220
>gi|94309482|ref|YP_582692.1| MotA/TolQ/ExbB proton channel [Cupriavidus metallidurans CH34]
gi|93353334|gb|ABF07423.1| biopolymer transport channel protein [Cupriavidus metallidurans
CH34]
Length = 206
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY-HAISHMGESLPAIG 176
+N+ L + +R +++ S + + EE ++ +L+ Y +A+ + P +G
Sbjct: 66 QNSPLGRVLAAGLRHVVLQPQTSRDAAKDVVEEAGRVVAHELERYLNALGTIASVAPLMG 125
Query: 177 IVGAILGIIKAMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
++G ++G+I+ GN +P+ L I V+L T G+I++
Sbjct: 126 LLGTVIGMIEIFGNQGGTGANPEQLAHGISVALYNTAFGLIVA 168
>gi|312881678|ref|ZP_07741456.1| MotA/TolQ/ExbB proton channel family protein [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370741|gb|EFP98215.1| MotA/TolQ/ExbB proton channel family protein [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 450
Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 64/115 (55%), Gaps = 22/115 (19%)
Query: 143 IENLMDEEIDIILYEK----LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----S 194
+E ++DE+ ++ EK LK + A++ P +G++G + G+I+ ++Q
Sbjct: 331 LEAVVDEQSEL---EKGLSMLKLFAALA------PMLGLLGTVTGMIETFQVITQFGNGD 381
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLC---NPLTSQIKSTR--LKQHRLYIIVKKA 244
PKI+ I ++L T+LG+I + L N L+SQ ++ R L++ + ++ ++A
Sbjct: 382 PKIMADGISMALVTTVLGLITAMPLLLAHNILSSQAETIRTTLEKQGIALVAEQA 436
>gi|197337647|ref|YP_002157783.1| TolQ protein [Vibrio fischeri MJ11]
gi|197314899|gb|ACH64348.1| TolQ protein [Vibrio fischeri MJ11]
Length = 451
Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 173 PAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC---NPLTS 225
P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L N L+S
Sbjct: 358 PMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLTHNILSS 417
Query: 226 QIKSTR--LKQHRLYIIVKKALIAYMNGAIPQVA 257
Q +S R L++ L ++ ++A A A+ A
Sbjct: 418 QAESIRTILEKQGLGLVAEQAEKAVQPNAMDMAA 451
>gi|89895778|ref|YP_519265.1| hypothetical protein DSY3032 [Desulfitobacterium hafniense Y51]
gi|89335226|dbj|BAE84821.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 257
Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST++G+ I +I GF GG+ L +IV G G + PL+ +K
Sbjct: 3 ISTLLGIIIGFGALILGFILEGGHMSSLFLLPPAIIVFGGTFGAVFASFPLREMKKLPTW 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F K+ G + + L ++ E +++ + + V++
Sbjct: 63 LKIAFTDKSYGT---LEAYETLIRFAEKARREGLLSLEQELEEVEDRFTRQGMQLVIDGT 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ D R I+ N E + ++ I ++E Y P +GI+G
Sbjct: 120 D-----PDITREILESNIAVMEKRH----KVGISVFEAAGGYS---------PTLGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
++G++ +GNL+ P L +I + TL G+ + L P+ +++K
Sbjct: 162 VMGLVHVLGNLTD-PDSLSKSIAGAFLATLYGVAFANLLYLPIATKLK 208
Searching..................................................done
Results from round 2
>gi|255764488|ref|YP_003065099.2| flagellar motor protein MotA [Candidatus Liberibacter asiaticus
str. psy62]
gi|254547839|gb|ACT57159.2| flagellar motor protein MotA [Candidatus Liberibacter asiaticus
str. psy62]
Length = 290
Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats.
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS
Sbjct: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN
Sbjct: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA
Sbjct: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII
Sbjct: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS
Sbjct: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
>gi|317047825|ref|YP_004115473.1| flagellar motor protein MotA [Pantoea sp. At-9b]
gi|316949442|gb|ADU68917.1| flagellar motor protein MotA [Pantoea sp. At-9b]
Length = 295
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 166/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + ++GG+ +GG+ L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLIILGYIVVLGSVLGGYLLVGGHLGALYQPSELLIIGGAAVGAFLVGNNGKAIKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y D++ LLY LM ++ E I+DP S IF + P +L +
Sbjct: 61 FPLLMRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIEDPSQSEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R+++ GN ++EIE LMDEEI+ +E P ++S +G+ LPA GIV A
Sbjct: 121 QLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPAQSLSAVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG + ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALVAHAMVGTFLGILLAYGFISPLASVLRQKCAESTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + + V + K +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFQELEEHVRNAKNPAKQT 290
>gi|304396267|ref|ZP_07378149.1| flagellar motor protein MotA [Pantoea sp. aB]
gi|308187235|ref|YP_003931366.1| Chemotaxis protein motA (Motility protein A) [Pantoea vagans C9-1]
gi|304356636|gb|EFM21001.1| flagellar motor protein MotA [Pantoea sp. aB]
gi|308057745|gb|ADO09917.1| Chemotaxis protein motA (Motility protein A) [Pantoea vagans C9-1]
Length = 295
Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I + ++GG+ +GG+ L QP E++++ GAG G F++ N K IK + +
Sbjct: 1 MLIIIGYLIVLGSVLGGYALVGGHLGALYQPAELLMIGGAGAGAFLVGNNGKSIKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++F + Y D++ LLY LM ++ E I+DP S IF + P +L +
Sbjct: 61 LPKLFRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIEDPSQSEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R+++ GN ++EIE LMDEEI+ +E P +I+ +G+ LPA GIV A
Sbjct: 121 QLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYEHECDVPAQSIAAVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG + ++ GT LGI+L+Y +PL+S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALVAHAMVGTFLGILLAYGFVSPLSSVLRQKCAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + K +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSAERPSFSELEEHVRNAKNPAKQT 290
>gi|291617785|ref|YP_003520527.1| MotA [Pantoea ananatis LMG 20103]
gi|291152815|gb|ADD77399.1| MotA [Pantoea ananatis LMG 20103]
Length = 295
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + ++GG+ +GG+ L QP E++++AGAG+G F++ N K IK + +
Sbjct: 1 MLIILGYIVVLGSVLGGYALVGGHLGALYQPAELLMIAGAGVGAFLVGNNGKSIKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ LLY LM ++ E I+DP S IF + P +L +
Sbjct: 61 LPLLFRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIEDPAQSEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R+++ GN ++EIE LMDEEI+ +E P +I+ +G+ LPA GIV A
Sbjct: 121 QLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPAQSIAAVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG + ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALVAHAMVGTFLGILLAYGFISPLASVLRQKCAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG PQ+A+E+GRK L +ERPS + + V + K +
Sbjct: 241 VKVTLLSSLNGYAPQIAVEFGRKTLYSAERPSFSELEEHVRNAKNPAKQT 290
>gi|300717115|ref|YP_003741918.1| flagellar motor protein [Erwinia billingiae Eb661]
gi|299062951|emb|CAX60071.1| Flagellar motor protein [Erwinia billingiae Eb661]
Length = 295
Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 163/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + ++GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLIIIGYILVLGSVLGGYAMVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LLY +M ++ E I+ P S IF + P +L +
Sbjct: 61 LPLLMRGSKYNKAVYMDLMALLYRIMAKSRQQGMLSLEADIESPQESEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+++ GN ++EIE LMDEEI+ +E P A+ +G+SLPA GIV A
Sbjct: 121 RLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPATALQTVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + + + LG ++ ++ GT LGI+L+Y +PL ++ + ++
Sbjct: 181 VMGVVHTLASADRPAAELGASVAHAMVGTFLGILLAYGFISPLAGVLRQKCAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L ++RPS + + V K +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTDRPSFTELEEHVRNAKSPAKQT 290
>gi|190890356|ref|YP_001976898.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
gi|190695635|gb|ACE89720.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
Length = 290
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 169/290 (58%), Positives = 219/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T C++G F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCVVGSFMAMGGHVEALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF PTVL+N
Sbjct: 61 LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQQAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|209547921|ref|YP_002279838.1| flagellar motor protein MotA [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533677|gb|ACI53612.1| chemotaxis motility protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 290
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 171/290 (58%), Positives = 220/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T C+IG F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCVIGSFMAMGGHVDALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF S PTVL+N
Sbjct: 61 LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKIVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|218461632|ref|ZP_03501723.1| flagellar motor protein MotA [Rhizobium etli Kim 5]
gi|218662603|ref|ZP_03518533.1| flagellar motor protein MotA [Rhizobium etli IE4771]
Length = 290
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 171/290 (58%), Positives = 219/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T C+IG F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCVIGSFMAMGGHVEALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF PTVL+N
Sbjct: 61 LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQQAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY LC+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCLCSPLVSQIKVVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|116250475|ref|YP_766313.1| flagellar motor protein MotA [Rhizobium leguminosarum bv. viciae
3841]
gi|115255123|emb|CAK06197.1| putative chemotaxis motility protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 290
Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats.
Identities = 171/290 (58%), Positives = 220/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T C+IG F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCVIGSFMAMGGDVNALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF S PTVL+N
Sbjct: 61 LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|156933519|ref|YP_001437435.1| flagellar motor protein MotA [Cronobacter sakazakii ATCC BAA-894]
gi|156531773|gb|ABU76599.1| hypothetical protein ESA_01339 [Cronobacter sakazakii ATCC BAA-894]
Length = 336
Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats.
Identities = 102/287 (35%), Positives = 163/287 (56%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+IG + + + GG+ GG L QP E++I+ GAG+G F++ N K IK + +L
Sbjct: 43 LILIGYLVILGTVFGGYMITGGELGALYQPAELIIIGGAGVGAFIVGNNGKAIKGTLKAL 102
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + Y D++ LLY LM ++ E I++P S IFTS P +L +N
Sbjct: 103 PLLFRRSKYTKSMYMDLMALLYRLMTKSRQQGMFSLERDIENPKESEIFTSYPRILADNT 162
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ MG+SLPA GIV A+
Sbjct: 163 MLEFITDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLALMGDSLPAFGIVAAV 222
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++ V
Sbjct: 223 MGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFVSPLATVLRQKSAETTKMMQCV 282
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
K L++ +NG P +A+E+GRK L SERPS + + V +
Sbjct: 283 KVTLLSSLNGYAPPIAVEFGRKTLYSSERPSFTELDEHVRAVKSPNQ 329
>gi|239834450|ref|ZP_04682778.1| flagellar motor protein MotA [Ochrobactrum intermedium LMG 3301]
gi|239822513|gb|EEQ94082.1| flagellar motor protein MotA [Ochrobactrum intermedium LMG 3301]
Length = 328
Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 209/290 (72%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E VI+ GA LG F +ANP ++KD+G +
Sbjct: 39 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFVIILGAALGTFFIANPFSLVKDTGRA 98
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 99 CMEAFSNAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFQAYPSVLKKE 158
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RS+EIE LMDEEI I +KLKPYHA+ + E+LPA+GIV A
Sbjct: 159 DLTNFICDYCRLIIVGNVRSHEIEALMDEEIHTIARDKLKPYHAMVSISEALPALGIVAA 218
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 219 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVVGPIAAKIKSTREKNNRLYIV 278
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + +RP+I++V QE + ++A+
Sbjct: 279 VKQTLLAYMNGSLPQIAVEYGRKTISAYDRPTIDVVEQETMASAATQQAA 328
>gi|329907015|ref|ZP_08274541.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
gi|327547115|gb|EGF31987.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
Length = 286
Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats.
Identities = 98/285 (34%), Positives = 166/285 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + +L + GGF GG+ L QP E++++ GA LG F++ N K +K + +
Sbjct: 1 MLVIIGYIVVMLSVFGGFAMAGGHLAALWQPLELLMIGGAALGAFLVGNNGKAMKATLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D++ L++ ++ ++K E ++ P S IF+ P++L ++
Sbjct: 61 VPTLFKGSKFTKSLYMDLMSLMFEILTKVRKEGLMSIEGDVEKPEESPIFSKYPSILHDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN +++IENLMD EI+ +E P H I+ +G+ LPA GIV A
Sbjct: 121 HVVEFITDYLRLMVSGNMDAFQIENLMDNEIETHHHEGAVPAHCIAKLGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++S P LG I +L GT LGI+L+Y PL S ++ + ++Y
Sbjct: 181 VMGVVHTMESVSLPPAELGMLIAHALVGTFLGILLAYGFVGPLASLLEQKLDESTKIYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A +NG P +AIE+GRKVL +ERP+ + + + Q
Sbjct: 241 IKVTLLASLNGYAPALAIEFGRKVLFSTERPTFGELEEHIKQSKS 285
>gi|325981671|ref|YP_004294073.1| flagellar motor stator protein MotA [Nitrosomonas sp. AL212]
gi|325531190|gb|ADZ25911.1| flagellar motor stator protein MotA [Nitrosomonas sp. AL212]
Length = 286
Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats.
Identities = 101/285 (35%), Positives = 164/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G I I+ + GGF GG+ L QP E++++ G +G FV+ N K +K + +
Sbjct: 1 MLVSVGYLIIIISVFGGFALAGGHLASLWQPVEVLMIGGGAIGAFVVGNSNKALKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ LLY ++ ++K E +DDP NS IFT P +L ++
Sbjct: 61 LPTVFKGSKYTKALYMDLMTLLYEVLGKIRKEGLMSIEGDVDDPSNSPIFTKYPNILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T FI DY+R+++ GN S EIE+LMD E++ E P H ++ +G+ LPA GIV A
Sbjct: 121 HITEFITDYLRLMVGGNLNSLEIESLMDSELETHHQEGEVPVHVVAKLGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y +PL +++ + +++
Sbjct: 181 VMGVVHTMESVHLPPAELGVLIAAALVGTFLGILLAYGFVSPLAGKLEHNLHESSKMFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A +NG P +A+E+GRKVL +ERPS + + V Q
Sbjct: 241 IKITLLANLNGYSPVLAVEFGRKVLFTTERPSFLELEEHVKQSKS 285
>gi|253998519|ref|YP_003050582.1| flagellar motor protein MotA [Methylovorus sp. SIP3-4]
gi|253985198|gb|ACT50055.1| flagellar motor protein MotA [Methylovorus sp. SIP3-4]
Length = 286
Score = 334 bits (857), Expect = 8e-90, Method: Composition-based stats.
Identities = 97/285 (34%), Positives = 164/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ GG+ L QP E++++ G +G F++ N K +K + +
Sbjct: 1 MLVIVGYVVVLAAVFGGYALAGGHLGALWQPLEVLMIFGGAIGAFIVGNNGKALKATLGA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LL+ ++ ++K EN +++P +S +F+ P + ++
Sbjct: 61 LPTLFKGSKFTKALYMDLLALLFEILSKIRKDGMMSIENDVENPESSPLFSKYPALQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R++I GN ++++ENLMD EI+ E P H I+ +G+ LPA GIV A
Sbjct: 121 HLMEFITDYLRLMISGNMDAFQVENLMDNEIETHHQEGHVPVHCIARLGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M N++ P LG I +L GT LGI+L+Y PL+S ++ + ++Y
Sbjct: 181 VMGVVHTMENVALPPAELGILIAHALVGTFLGILLAYGFIGPLSSLLEQKLDESTKMYQT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L+A +NG P +A+E+GRKVL +ERP + + V Q
Sbjct: 241 VKATLLASLNGYAPAIAVEFGRKVLYSTERPGFTELEEHVKQAKS 285
>gi|188533602|ref|YP_001907399.1| flagellar motor protein MotA [Erwinia tasmaniensis Et1/99]
gi|188028644|emb|CAO96506.1| Chemotaxis protein [Erwinia tasmaniensis Et1/99]
Length = 294
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 102/290 (35%), Positives = 164/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + ++GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + S
Sbjct: 1 MLIILGYIIVLGSVLGGYAMVGGHLGALYQPSEVLIIVGAGVGAFIVGNNGKAIKATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LLY LM ++ E ID+P S IF + P ++ +
Sbjct: 61 LPLLMRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIDNPQESEIFANYPRIIADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R+++ GN ++EIE LMDEEI+ +E P A+ MG+SLPA GIV A
Sbjct: 121 KLVDFISDYLRLMVSGNMNAFEIEALMDEEIETYEHECDVPATALGTMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII + + LG I ++ GT LGI+L+Y +PL ++ + ++
Sbjct: 181 VMGIIHTLAAADRPAAELGALIANAMVGTFLGILLAYGFISPLAGVLRQKCAENIKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V ++ S
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFSELEEHVRNAKSPQQTS 290
>gi|290474939|ref|YP_003467823.1| proton conductor component of motor, torque generator [Xenorhabdus
bovienii SS-2004]
gi|289174256|emb|CBJ81045.1| proton conductor component of motor, torque generator [Xenorhabdus
bovienii SS-2004]
Length = 293
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 101/288 (35%), Positives = 167/288 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + +IGG+ +GG+ L QP E +I+AGAG+G F++ N K IK +
Sbjct: 1 MLVLLGYIVVFGAVIGGYLLVGGHMGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +I + Y D++ LL+ L+ ++ E I++P+ S IFT P +L++
Sbjct: 61 LPKILRRSKYNKAMYMDLMALLFRLLSKSRQNGLLALERDIENPHQSDIFTQYPRLLKDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F DYMR+II GN +EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 YLMDFTTDYMRLIISGNMNPHEIEALMDEEIETYEQESEVPATSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ +Q ++
Sbjct: 181 VMGVVHALGSADRPAGELGALIAHAMVGTFLGILLAYGFVSPLATLLRQRSSEQVKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+K L++ +NG PQ+A+E+GRK L L++RPS + + V + +
Sbjct: 241 IKITLLSSLNGYAPQIAVEFGRKTLFLTDRPSFTELEEHVRRVKSPVQ 288
>gi|292488571|ref|YP_003531455.1| chemotaxis protein MotA [Erwinia amylovora CFBP1430]
gi|292899742|ref|YP_003539111.1| chemotaxis protein [Erwinia amylovora ATCC 49946]
gi|291199590|emb|CBJ46707.1| chemotaxis protein [Erwinia amylovora ATCC 49946]
gi|291554002|emb|CBA21047.1| Chemotaxis protein MotA (Motility protein A) [Erwinia amylovora
CFBP1430]
gi|312172717|emb|CBX80973.1| Chemotaxis protein MotA (Motility protein A) [Erwinia amylovora
ATCC BAA-2158]
Length = 294
Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 164/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + ++GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + S
Sbjct: 1 MLIILGYIIVLGSVLGGYLMVGGHLGALYQPSEVLIIVGAGVGAFIVGNNGKAIKATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LLY LM ++ E ID+P S IF + P +L +
Sbjct: 61 LPLLMRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIDNPQESEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+++ GN ++EIE LMDEEI+ +E P A+ MG+SLPA GIV A
Sbjct: 121 RLVDFISDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPAIALGTMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII + + LG I ++ GT LGI+L+Y +PL+ ++ + ++
Sbjct: 181 VMGIIHTLAAADRPAAELGALIANAMVGTFLGILLAYGFISPLSGVLRQKCAENTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V ++ S
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFIELEEHVRNAKSPQQTS 290
>gi|253996631|ref|YP_003048695.1| flagellar motor protein MotA [Methylotenera mobilis JLW8]
gi|253983310|gb|ACT48168.1| flagellar motor protein MotA [Methylotenera mobilis JLW8]
Length = 286
Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats.
Identities = 96/285 (33%), Positives = 160/285 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + I GG+ GG+ L QP E++++ G +G F++ N K K + +
Sbjct: 1 MFVIIGYVVVCGTIFGGYALAGGHLGGLWQPLEVLMIFGGAVGAFIVGNDSKAQKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LL+ ++ ++K EN +++P S +F+ P + ++
Sbjct: 61 LPTLFKGSKFNKALYMDLLALLFEILTKIRKDGMMSIENDVENPEASPLFSKYPALQHDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+++ GN ++++ENLMD EI+ E P H ++ +G+ LPA GIV A
Sbjct: 121 HLIEFITDYLRLMVSGNMDAFQVENLMDNEIETHHMEGHVPAHCVAKLGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M N++ P LG I +L GT LGI+L+Y PL+ ++ + ++Y
Sbjct: 181 VMGVVHTMENVALPPAELGILIAHALVGTFLGILLAYGFIGPLSGLLEQKLEESTKMYQT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L+A +NG P +A+E+GRKVL +ERP+ + V Q
Sbjct: 241 VKVTLLASLNGYAPAIAVEFGRKVLYSTERPTFAELESHVKQAKG 285
>gi|259908188|ref|YP_002648544.1| flagellar motor protein MotA [Erwinia pyrifoliae Ep1/96]
gi|224963810|emb|CAX55312.1| Chemotaxis protein [Erwinia pyrifoliae Ep1/96]
gi|283478117|emb|CAY74033.1| Chemotaxis protein MotA (Motility protein A) [Erwinia pyrifoliae
DSM 12163]
gi|310767898|gb|ADP12848.1| flagellar motor protein MotA [Erwinia sp. Ejp617]
Length = 294
Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 164/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + ++GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + S
Sbjct: 1 MLIILGYIIVLGSVLGGYAMVGGHLGALYQPSEVLIIVGAGVGAFIVGNNGKAIKATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LLY LM ++ E ID+P S IF + P +L +
Sbjct: 61 LPLLMRGSKYNKAVYMDLMALLYRLMAKSRQQGMLSLERDIDNPQESEIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+++ GN ++EIE LMDEEI+ +E P A+ MG+SLPA GIV A
Sbjct: 121 RLVDFINDYLRLMVSGNMNAFEIEALMDEEIETYEHECEVPAIALGTMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII + + LG I ++ GT LGI+L+Y +PL+ ++ + ++
Sbjct: 181 VMGIIHTLAAADRPAAELGALIANAMVGTFLGILLAYGFISPLSGVLRQKCAENTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V ++ S
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFIELEEHVRNAKSPQQTS 290
>gi|15887906|ref|NP_353587.1| flagellar motor protein MotA [Agrobacterium tumefaciens str. C58]
gi|3914040|sp|Q44456|MOTA_AGRT5 RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|1480837|gb|AAC45321.1| MotA [Agrobacterium tumefaciens]
gi|2459706|gb|AAB71782.1| MotA [Agrobacterium tumefaciens]
gi|15155498|gb|AAK86372.1| flagellar motor protein [Agrobacterium tumefaciens str. C58]
Length = 290
Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats.
Identities = 180/290 (62%), Positives = 232/290 (80%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +IGL IT CIIGG+ AMGG+ +L+QPFE++I+ GAGLGGF+MANP+KV+KDSG +
Sbjct: 1 MNIVIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y DVL +LY LM +L+ SRNE E HID+P S+IF S P+VL+N
Sbjct: 61 LGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT+FICDY+R+II+GNARS+EIE LMDEEI+ IL++KLKPYHAI+ MG+S PAIGIV A
Sbjct: 121 ELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++SP++LG IG +L GT+LGIILSYS+CNPL SQ+K R KQHRLYII
Sbjct: 181 VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ LIAYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA 290
>gi|187926230|ref|YP_001892575.1| flagellar motor protein MotA [Ralstonia pickettii 12J]
gi|241665718|ref|YP_002984077.1| flagellar motor protein MotA [Ralstonia pickettii 12D]
gi|187727984|gb|ACD29148.1| flagellar motor protein MotA [Ralstonia pickettii 12J]
gi|240867745|gb|ACS65405.1| flagellar motor protein MotA [Ralstonia pickettii 12D]
Length = 286
Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats.
Identities = 99/285 (34%), Positives = 164/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + +
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGIGAFVVGNDKKAINATVKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I++P+ ST+F + P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVVLSKIRREGMMSIEADIENPHESTLFANYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A MNG P +A+E+GRKVL +ERPS + V
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSFAELEDHVRGAKT 285
>gi|241203099|ref|YP_002974195.1| flagellar motor protein MotA [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856989|gb|ACS54656.1| chemotaxis motility protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 290
Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats.
Identities = 168/290 (57%), Positives = 218/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T CI+G F AMGG L QPFE +I+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCIVGSFMAMGGEVDALFQPFEFLIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF S PTVL+N
Sbjct: 61 LSEAFRHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYH+I M +S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHSIQIMSDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290
>gi|322832490|ref|YP_004212517.1| flagellar motor protein MotA [Rahnella sp. Y9602]
gi|321167691|gb|ADW73390.1| flagellar motor protein MotA [Rahnella sp. Y9602]
Length = 296
Score = 331 bits (850), Expect = 5e-89, Method: Composition-based stats.
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + + GGF +GG L QP E++I+ GAG+G F + N K IK + +
Sbjct: 1 MLVIIGYIVVLGSVFGGFMLVGGELGALYQPAELLIIGGAGIGAFFVGNNGKAIKSTMRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++F + Y D++ LLY ++ ++ EN ID+P S IF + P +L +
Sbjct: 61 LPQLFRASKYNKALYMDLMALLYRVLAKSRQQGMLSLENDIDNPAESDIFANYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L ++ DY+R+++ GN ++EIE LMDEEI+ +E P ++++ +G+SLPA GIV A
Sbjct: 121 QLVEYLTDYLRLMVSGNMNAFEIEALMDEEIETYEHESEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GI+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGIVHTLAAADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAENAKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+K L++ +NG PQ+A+E+GRK L SERPS + + V Q +
Sbjct: 241 IKVTLLSSINGYAPQIAVEFGRKTLYTSERPSFIELEEHVRQVKSPGQ 288
>gi|300722596|ref|YP_003711886.1| proton conductor component of motor, torque generator [Xenorhabdus
nematophila ATCC 19061]
gi|297629103|emb|CBJ89688.1| proton conductor component of motor, torque generator [Xenorhabdus
nematophila ATCC 19061]
Length = 293
Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats.
Identities = 99/284 (34%), Positives = 167/284 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + +IGG+ +GG+ L QP E +I+AGAG+G F++ N K IK +
Sbjct: 1 MLVLLGYIVVFGAVIGGYLLVGGHMGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ L + L+ ++ E I++P+ S IFT P +L++
Sbjct: 61 LPKVLRRSKYNKAMYMDLMALQFRLLSKSRQHGLLALERDIENPHQSDIFTQYPRLLKDQ 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DYMR+II GN +EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 QLMDFITDYMRLIISGNMNPHEIEALMDEEIETYEQESEVPATSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ +Q ++
Sbjct: 181 VMGVVHALGSADRPAGELGMLIAHAMVGTFLGILLAYGFVSPLATLLRQRSSEQVKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L++ ++G PQ+A+E+GRK L L++RPS + + V +
Sbjct: 241 IKVTLLSSLHGYAPQIAVEFGRKTLFLTDRPSFTELEEHVRRVK 284
>gi|319944148|ref|ZP_08018426.1| chemotaxis MotA protein [Lautropia mirabilis ATCC 51599]
gi|319742642|gb|EFV95051.1| chemotaxis MotA protein [Lautropia mirabilis ATCC 51599]
Length = 285
Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats.
Identities = 102/285 (35%), Positives = 159/285 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + +IGG+ GG+ L QP E++++ GA G F++ANP K +K +
Sbjct: 1 MFVIIGYIVVVASVIGGYAMAGGHVSALFQPLELLMIGGAAFGAFIVANPGKDLKACMAA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F ++ Y V+ +LY ++ +K EN ++ P +S +FT P +L ++
Sbjct: 61 LPSVFKGSKYTKERYLSVMAMLYDILSKARKEGLMAIENDVEQPESSPLFTRYPDLLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY+RM+I GN + EIENLMD E++ +E + P H+I M + LPA GIV A
Sbjct: 121 HLIEFVTDYLRMMISGNLNALEIENLMDNEMETHHHEAMVPAHSIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ Q P ILG I +L GT LGI+++Y PL + + +
Sbjct: 181 VMGVVHTMGSVGQPPAILGEMIAHALVGTFLGILMAYGFVGPLADVLTQKTNEAAKELQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L+A M G P + +E+GRKVL +ERP + V Q
Sbjct: 241 VKVTLLASMQGYAPAICVEFGRKVLYSTERPGFAELEGHVKQKRA 285
>gi|193222290|emb|CAL61470.2| Chemotaxis protein MotA (Motility protein A) [Herminiimonas
arsenicoxydans]
Length = 286
Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats.
Identities = 103/285 (36%), Positives = 162/285 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + + GGF GG+ L QP E++++ GA G F + N K IK + +
Sbjct: 1 MLVIIGYIVVLASVFGGFALAGGHLSSLFQPVELLMIGGAAAGAFFVGNNSKAIKATFKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LL+ ++ ++K E ID P S IFT PTVL ++
Sbjct: 61 LPNVFKGSKYTKSLYMELMTLLFEILTKVRKEGLMSIEGDIDAPEESAIFTKYPTVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN +++IENLMD EID E P H I+ MG+ LPA GIV A
Sbjct: 121 HIIEFITDYLRLMVSGNMDAFQIENLMDNEIDTHHAEGEIPVHCIAKMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y +PL+S ++ + +++
Sbjct: 181 VMGVVHTMASVGLPPAELGILIANALVGTFLGILLAYGFVSPLSSTLEQKLHESSKVFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A +NG P +A+E+GRKVL +ERPS + + Q
Sbjct: 241 IKVTLLASLNGYAPALAVEFGRKVLFSTERPSFSELEDHIKQSKS 285
>gi|148558032|ref|YP_001257192.1| flagellar motor protein MotA [Brucella ovis ATCC 25840]
gi|148369317|gb|ABQ62189.1| chemotaxis motA protein [Brucella ovis ATCC 25840]
Length = 339
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 50 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 109
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 110 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 169
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 170 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 229
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 230 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 289
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 290 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 339
>gi|300694373|ref|YP_003750346.1| mota: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum PSI07]
gi|299076410|emb|CBJ35726.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum PSI07]
Length = 286
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 99/285 (34%), Positives = 163/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + S
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGVGAFVVGNDKKAINATVKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I+ P+ S +F++ P + ++
Sbjct: 61 LPGLFKGSKYTKSLYMEVMALLYVMLSKIRREGMMSIEADIESPHESALFSNYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A MNG P +A+E+GRKVL +ERPS + V
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSFAELEDHVRGAKT 285
>gi|270262420|ref|ZP_06190691.1| chemotaxis protein MotA [Serratia odorifera 4Rx13]
gi|270043104|gb|EFA16197.1| chemotaxis protein MotA [Serratia odorifera 4Rx13]
Length = 298
Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats.
Identities = 96/289 (33%), Positives = 167/289 (57%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + ++
Sbjct: 4 LVILGYLVVLGAVFGGYMMVGGHLGALYQPSEFLIIGGAGIGAFIVGNNGKAIKSTLRAI 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++ +D Y D++ LLY L+ ++ E ID+P S IF++ P +L +N
Sbjct: 64 PKLMRRSKYSKDLYMDLMALLYRLLAKSRQQGMLSLEFDIDNPQESEIFSNYPRILADNT 123
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L FI DY+R+++ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A+
Sbjct: 124 LVEFITDYLRLMVSGNMNAFEIEALMDEEIETFEQESEVPAGSLAMVGDSLPAFGIVAAV 183
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++ +
Sbjct: 184 MGVVHALASADRPAAELGALIANAMVGTFLGILLAYGFISPLATLLRQKSAENVKMMQCI 243
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
K L++ +NG PQ+A+E+GRK L +ERPS + + V + + +
Sbjct: 244 KVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFVELEEHVRRVKAPAQQA 292
>gi|17549630|ref|NP_522970.1| flagellar motor protein MotA [Ralstonia solanacearum GMI1000]
gi|83747600|ref|ZP_00944637.1| Probable chemotaxis motA protein [Ralstonia solanacearum UW551]
gi|207725017|ref|YP_002255414.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
MolK2]
gi|207738643|ref|YP_002257036.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
IPO1609]
gi|300697988|ref|YP_003748649.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum
CFBP2957]
gi|17431884|emb|CAD18562.1| probable chemotaxis (motility protein a) transmembrane [Ralstonia
solanacearum GMI1000]
gi|83725780|gb|EAP72921.1| Probable chemotaxis motA protein [Ralstonia solanacearum UW551]
gi|206590246|emb|CAQ37207.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
MolK2]
gi|206592011|emb|CAQ58917.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
IPO1609]
gi|299074712|emb|CBJ54270.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum
CFBP2957]
Length = 286
Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats.
Identities = 99/285 (34%), Positives = 163/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + S
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGVGAFVVGNDKKAINATVKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I+ P+ S +F++ P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVMLSKIRREGMMSIEADIESPHESALFSNYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A MNG P +A+E+GRKVL +ERPS + V
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSFAELEDHVRGAKT 285
>gi|74317261|ref|YP_315001.1| flagellar motor protein MotA [Thiobacillus denitrificans ATCC
25259]
gi|74056756|gb|AAZ97196.1| probable chemotaxis transmembrane protein MotA [Thiobacillus
denitrificans ATCC 25259]
Length = 286
Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats.
Identities = 98/285 (34%), Positives = 160/285 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I +L + GGF GG+ L QP E++++ G +G F++ N KVIK + +
Sbjct: 1 MLVIVGYVIVVLSVFGGFVLAGGHLAALFQPLELLMIGGGAIGAFLVGNNNKVIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D L LLY L+ ++K E +D P +S +F+ P ++ ++
Sbjct: 61 LPTVLKGSKYTRALYMDTLALLYELLTKIRKEGLMSVEADVDSPESSPLFSKYPAIMADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ G+ ++EIENLMD EI+ +E P H I+ +G+ LPA GIV A
Sbjct: 121 HVVEFLTDYLRLMVSGSMNAFEIENLMDNEIETHHHEGEVPAHVIAKIGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL +++ + ++
Sbjct: 181 VMGVVHTMESVGLPPAELGILIAHALVGTFLGILLAYGFVGPLAGRLEQRVHESTKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L+A +NG P +A+E+GRKVL +ERPS + V
Sbjct: 241 VKVTLLASINGYAPAIAVEFGRKVLFSTERPSFSELEVHVKSAKS 285
>gi|309778973|ref|ZP_07673743.1| chemotaxis protein MotA [Ralstonia sp. 5_7_47FAA]
gi|308922320|gb|EFP67947.1| chemotaxis protein MotA [Ralstonia sp. 5_7_47FAA]
Length = 286
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 98/285 (34%), Positives = 163/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + +
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGIGAFVVGNDKKAINATVKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I++P+ S +F + P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVVLSKIRREGMMSIEADIENPHESALFANYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A MNG P +A+E+GRKVL +ERPS + V
Sbjct: 241 MKVTLLASMNGYAPAIAVEFGRKVLFSTERPSFAELEDHVRGAKT 285
>gi|126417354|gb|ABO13879.1| MotA [Ralstonia solanacearum]
Length = 286
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 98/285 (34%), Positives = 163/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + +
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGVGAFVVGNDKKAINATVKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I+ P+ S +F++ P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVMLSKIRREGMMSIEADIESPHESALFSNYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A MNG P +A+E+GRKVL +ERPS + V
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSFAELEDHVRGAKT 285
>gi|238795649|ref|ZP_04639163.1| hypothetical protein ymoll0001_15000 [Yersinia mollaretii ATCC
43969]
gi|238720375|gb|EEQ12177.1| hypothetical protein ymoll0001_15000 [Yersinia mollaretii ATCC
43969]
Length = 295
Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 165/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYIIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P +L +
Sbjct: 61 MPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIENPRESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPAPQA 290
>gi|225628601|ref|ZP_03786635.1| flagellar motor protein MotA [Brucella ceti str. Cudo]
gi|225616447|gb|EEH13495.1| flagellar motor protein MotA [Brucella ceti str. Cudo]
Length = 339
Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats.
Identities = 153/290 (52%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 50 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 109
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 110 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 169
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 170 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 229
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 230 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 289
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V Q+ + ++A+
Sbjct: 290 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQKTMASVPTQQAA 339
>gi|238756397|ref|ZP_04617707.1| hypothetical protein yruck0001_10360 [Yersinia ruckeri ATCC 29473]
gi|238705370|gb|EEP97777.1| hypothetical protein yruck0001_10360 [Yersinia ruckeri ATCC 29473]
Length = 295
Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats.
Identities = 97/290 (33%), Positives = 167/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+AGAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYMMVGGHLGALYQPSEFLIIAGAGIGAFIVGNNGKAIKATLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P +L +N
Sbjct: 61 MPKLLRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIENPQESEIFSNYPRILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 ILVEFITDYLRLIVSGNMNAFEIEALMDEEIETYEQESEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQNAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKSPAPQA 290
>gi|153011532|ref|YP_001372746.1| flagellar motor protein MotA [Ochrobactrum anthropi ATCC 49188]
gi|151563420|gb|ABS16917.1| chemotaxis motA protein [Ochrobactrum anthropi ATCC 49188]
Length = 290
Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats.
Identities = 155/290 (53%), Positives = 210/290 (72%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E VI+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFVIILGAALGTFFIANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S+IF + P+VL+
Sbjct: 61 CMEAFSNAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESSIFQAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RS+EIE LMDEEI I +KLKPYHA+ + E+LPA+GIV A
Sbjct: 121 DLTHFICDYCRLIIVGNVRSHEIEALMDEEIHTIARDKLKPYHAMVSISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVVGPIAAKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + +RP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYDRPTIDVVEQETMASAPTQQAA 290
>gi|161620212|ref|YP_001594098.1| flagellar motor protein MotA [Brucella canis ATCC 23365]
gi|163844321|ref|YP_001621976.1| flagellar motor protein MotA [Brucella suis ATCC 23445]
gi|161337023|gb|ABX63327.1| chemotaxis motA protein [Brucella canis ATCC 23365]
gi|163675044|gb|ABY39154.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 323
Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 34 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 93
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 94 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 153
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 154 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 213
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 214 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 273
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 274 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 323
>gi|237816640|ref|ZP_04595632.1| flagellar motor protein MotA [Brucella abortus str. 2308 A]
gi|237787453|gb|EEP61669.1| flagellar motor protein MotA [Brucella abortus str. 2308 A]
Length = 339
Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 50 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 109
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 110 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 169
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 170 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 229
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 230 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 289
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 290 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 339
>gi|293395564|ref|ZP_06639847.1| lateral flagellar motor protein MotA [Serratia odorifera DSM 4582]
gi|291421883|gb|EFE95129.1| lateral flagellar motor protein MotA [Serratia odorifera DSM 4582]
Length = 298
Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats.
Identities = 95/289 (32%), Positives = 167/289 (57%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +L
Sbjct: 4 LVILGYLVVLGAVFGGYMIVGGHLGALYQPAEFLIIGGAGVGAFIVGNNGKAIKSTLRAL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++ ++ Y D++ LL+ L+ ++ E ID+P S IF++ P +L +N
Sbjct: 64 PKLMRRSKYSKELYMDLMALLFRLLAKSRQQGMLSLEFDIDNPQESEIFSNYPRILADNH 123
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L FI DY+R+++ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A+
Sbjct: 124 LVEFITDYLRLMVSGNMNAFEIEALMDEEIETFEQESEVPAGSLAMVGDSLPAFGIVAAV 183
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++ +
Sbjct: 184 MGVVHALASADRPAAELGALIANAMVGTFLGILLAYGFISPLATLLRQKSAENVKMMQCI 243
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
K L++ +NG PQ+A+E+GRK L +ERPS + + V + + +
Sbjct: 244 KVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFVELEEHVRRVKAPAQTA 292
>gi|299069797|emb|CBJ41077.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum CMR15]
Length = 286
Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats.
Identities = 99/285 (34%), Positives = 162/285 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + + GG+ GG+ L QP E++I+ GAG+G FV+ N K I + S
Sbjct: 1 MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGVGSFVVGNDKKAINATVKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +V+ LLY+++ +++ E I+ P+ S +F + P + ++
Sbjct: 61 LPGLFKGSKYTKALYMEVMALLYVMLSKIRREGMMSIEADIESPHESALFANYPAIQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICDY+R+++ GN ++IE LMD+EID +E +P I+ +G+++PA GIV A
Sbjct: 121 HALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL S ++ + +L+
Sbjct: 181 VMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYGFIGPLGSLLEQRAEESTKLFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A MNG P +A+E+GRKVL +ERPS + V
Sbjct: 241 IKVTLLASMNGYAPAIAVEFGRKVLFSTERPSFAELEDHVRGAKT 285
>gi|306846300|ref|ZP_07478861.1| flagellar motor protein MotA [Brucella sp. BO1]
gi|306273295|gb|EFM55164.1| flagellar motor protein MotA [Brucella sp. BO1]
Length = 323
Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 34 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 93
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 94 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEFHIDNPKESPIFLAYPSVLKKE 153
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 154 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 213
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 214 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 273
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 274 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 323
>gi|310764848|gb|ADP09798.1| Flagellar motor protein MotA [Erwinia sp. Ejp617]
Length = 298
Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats.
Identities = 98/286 (34%), Positives = 168/286 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I + GGF GG+ L QP E++I+ GAG+G F++ N +K +K +G +
Sbjct: 1 MLVVIGYLVVIATVFGGFVLSGGSLGSLFQPVELLIIGGAGIGAFIVGNNMKSLKATGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ +F + + Y D++ +L++L+ + E I+DP NS IF++ P +L +
Sbjct: 61 LVRLFFGRNYSKVVYMDLMAMLFLLLSKSRVQGLMSLEKDIEDPANSDIFSAYPRLLSDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY R++I G+ +++IE+LMDEEI+ E P +++ +G++ PA GIV A
Sbjct: 121 TLINFVLDYFRLMISGSMNAHQIEDLMDEEIETCQEELEVPAQSLNTVGDAFPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G + LG I ++ GT LGI+++Y PL + ++ Q ++
Sbjct: 181 VMGVVNALGAADRPAAELGMLIAHAMVGTFLGILIAYGFVLPLATVLRQKSSDQVKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+K L++ +NG PQ+A+E+GRK L SERPS E + V + N
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTSERPSFEELETHVREVKSN 286
>gi|302878238|ref|YP_003846802.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302581027|gb|ADL55038.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 284
Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats.
Identities = 91/284 (32%), Positives = 157/284 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + GGF GG+ L QP E++++ G +G F + N + IK +
Sbjct: 1 MLVIVGYVVVCGSVFGGFAMAGGHLGALWQPLELLMIFGGAMGAFCVGNNMTAIKATVKD 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +DTY +++ L+Y L+ ++K E ++ P S +F+ P +L ++
Sbjct: 61 LPSLFKGSKYSKDTYMELMALMYELLTKVRKEGLMSIEGDVEKPEESPVFSKYPKILSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN + EIENLMD E++ +E L H I+ + + +PA GIV A
Sbjct: 121 HVVEFITDYLRIMVSGNLNAMEIENLMDVELETHHHEALVSSHVIAKLADGMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL S ++ + +++
Sbjct: 181 VMGVVHTMESVGMPPAELGMLIAHALVGTFLGILLAYGFVGPLASLLEQKAEEGGKIFQT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A +NG P +A+E+GRK L +RP+ + + V Q
Sbjct: 241 IKVTLLANLNGYAPAMAVEFGRKALSSGDRPNFTELEEHVKQKR 284
>gi|259907646|ref|YP_002648002.1| Flagellar motor protein MotA [Erwinia pyrifoliae Ep1/96]
gi|224963268|emb|CAX54752.1| Flagellar motor protein MotA [Erwinia pyrifoliae Ep1/96]
gi|283477489|emb|CAY73405.1| Chemotaxis protein motA (Motility protein A) [Erwinia pyrifoliae
DSM 12163]
Length = 298
Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats.
Identities = 98/286 (34%), Positives = 169/286 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I + GGF GG+ L QP E++I+ GAG+G F++ N +K +K +G +
Sbjct: 1 MLVVIGYLVVIATVFGGFVLSGGSLSSLFQPVELLIIGGAGVGAFIVGNNMKSLKATGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ +F ++ + Y D++ +L++L+ + E I+DP NS IF++ P +L +
Sbjct: 61 LVRLFFGRSYSKVVYMDLMAMLFLLLSKSRVQGLMSLEKDIEDPANSDIFSAYPRLLSDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY R++I G+ +++IE+LMDEEI+ E P +++ +G++ PA GIV A
Sbjct: 121 TLINFVLDYFRLMISGSMNAHQIEDLMDEEIETCQEELEVPAQSLNTVGDAFPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G + LG I ++ GT LGI+++Y PL + ++ Q ++
Sbjct: 181 VMGVVNALGAADRPAAELGMLIAHAMVGTFLGILIAYGFVLPLATVLRQKSSDQVKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+K L++ +NG PQ+A+E+GRK L SERPS E + V + N
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTSERPSFEELETHVREVKSN 286
>gi|123442805|ref|YP_001006782.1| flagellar motor protein MotA [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332161301|ref|YP_004297878.1| flagellar motor protein MotA [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|122089766|emb|CAL12619.1| chemotaxis MotA protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318605217|emb|CBY26715.1| flagellar motor rotation protein MotA [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325665531|gb|ADZ42175.1| flagellar motor protein MotA [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 295
Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 164/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYIIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ LLY L+ ++ E I+ P S IF++ P +L +
Sbjct: 61 LPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIESPLESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 VLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPAPQA 290
>gi|238758126|ref|ZP_04619306.1| hypothetical protein yaldo0001_12660 [Yersinia aldovae ATCC 35236]
gi|238703664|gb|EEP96201.1| hypothetical protein yaldo0001_12660 [Yersinia aldovae ATCC 35236]
Length = 295
Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 165/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYMIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P +L +
Sbjct: 61 MPKLMHRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIENPLESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKSPAPQA 290
>gi|152980324|ref|YP_001353789.1| flagellar motor protein MotA [Janthinobacterium sp. Marseille]
gi|151280401|gb|ABR88811.1| MotA chemotaxis protein [Janthinobacterium sp. Marseille]
Length = 286
Score = 328 bits (840), Expect = 9e-88, Method: Composition-based stats.
Identities = 100/285 (35%), Positives = 162/285 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + +L + GGF GG+ L QP E++++ GA +G F + N K IK + +
Sbjct: 1 MLVIIGYLVVVLSVFGGFALAGGHLAALFQPLELLMIGGAAVGAFFVGNNGKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LL+ ++ ++K E I+ P S IF PTVL ++
Sbjct: 61 LPSVFKGSRYTKSLYMELMTLLFEILTKVRKEGLMSIEGDIEAPEESAIFAKYPTVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ DY+R+++ GN +++IENLMD EI+ E P H ++ +G+ LPA GIV A
Sbjct: 121 HTIEFMTDYLRLMVSGNMDAFQIENLMDNEIETHHAEGEVPVHCVAKVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+LSY PL+S ++ + +++
Sbjct: 181 VMGVVHTMESVGLPPAELGMLIAHALVGTFLGILLSYGFVTPLSSLLEQKLHESSKIFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L+A +NG P +A+E+GRKVL +ERPS + + + Q
Sbjct: 241 VKVTLLASLNGYAPALAVEFGRKVLFSTERPSFSEMEEHIRQSKS 285
>gi|300312290|ref|YP_003776382.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
gi|300075075|gb|ADJ64474.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
Length = 286
Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats.
Identities = 100/285 (35%), Positives = 165/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + + GGF GG+ L QP E++++ GA G F++ N K IK + +
Sbjct: 1 MLVIIGYIVVMASVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNNGKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F A + Y +++ LL+ ++ +K E I++P +S IF+ P VL ++
Sbjct: 61 LPTVFKGSAYTKALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY+R+++ GN +++IENLMD EI+ +E P H I+ +G+ +PA GIV A
Sbjct: 121 HLIEFMTDYLRLMVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL+S ++ + ++Y
Sbjct: 181 VMGVVHTMESVGIPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L+A +NG P ++IE+GRKVL +ERP+ + + V Q
Sbjct: 241 VKVTLLASLNGYAPALSIEFGRKVLFSTERPTFLELEEHVKQARG 285
>gi|91776292|ref|YP_546048.1| flagellar motor protein MotA [Methylobacillus flagellatus KT]
gi|91710279|gb|ABE50207.1| putative chemotaxis transmembrane protein MotA [Methylobacillus
flagellatus KT]
Length = 286
Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats.
Identities = 99/285 (34%), Positives = 159/285 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I G + + + GGF GG+ L QP E++++ GA +G F++ N K IK + +
Sbjct: 1 MLVIAGYLVVLGSVFGGFAMAGGHLAALFQPIELLMIGGAAIGAFLVGNDAKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LL+ ++ +++ E+ ID+P S IF+ P +L ++
Sbjct: 61 LPSVFKGSKYTKARYMDLLALLFEILTKIRRDGMMAIESDIDNPEASQIFSKYPDILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R++ GN +++IENLMD EI+ +E + P H I+ +GE +PA GIV A
Sbjct: 121 HLMDFICDYLRLMTSGNMDAFQIENLMDNEIETHHHESMVPSHCIARLGEGMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL S ++ + ++
Sbjct: 181 VMGVVHTMESVGLPPGELGMLIAHALVGTFLGILLAYGFVGPLASLLERKADESSKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
K L+A N P +A+E+GRKVL +ERP + V Q
Sbjct: 241 AKVTLLASHNSYAPAIAVEFGRKVLYSTERPEFAELEAHVKQARA 285
>gi|292489121|ref|YP_003532008.1| chemotaxis protein MotA [Erwinia amylovora CFBP1430]
gi|292900240|ref|YP_003539609.1| motility protein A [Erwinia amylovora ATCC 49946]
gi|291200088|emb|CBJ47214.1| chemotaxis protein (motility protein A) [Erwinia amylovora ATCC
49946]
gi|291554555|emb|CBA22157.1| Chemotaxis protein motA (Motility protein A) [Erwinia amylovora
CFBP1430]
gi|312173279|emb|CBX81534.1| Chemotaxis protein motA (Motility protein A) [Erwinia amylovora
ATCC BAA-2158]
Length = 298
Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats.
Identities = 98/286 (34%), Positives = 169/286 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I + GGF GG+ L QP E++I+ GAG+G F++ N +K +K +G +
Sbjct: 1 MLVVIGYLVVIATVFGGFVLSGGSLGSLFQPVELLIIGGAGIGAFIVGNNMKSLKATGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ +F ++ + Y D++ +L++L+ + E I+DP NS IF++ P +L +
Sbjct: 61 LVRLFFGRSYSKVVYMDLMAMLFLLLSKSRVQGLMSLEKDIEDPINSDIFSAYPRLLSDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY R++I G+ +++IE+LMDEEI+ E P +++ +G++ PA GIV A
Sbjct: 121 TLINFVLDYFRLMISGSMNAHQIEDLMDEEIETCQEELEVPSQSLNTVGDAFPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G + LG I ++ GT LGI+++Y PL + ++ Q ++
Sbjct: 181 VMGVVNALGAADRPAAELGMLIAHAMVGTFLGILIAYGFVLPLATVLRQKSSDQVKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+K L++ +NG PQ+A+E+GRK L SERPS E + V + N
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTSERPSFEELETHVREVKSN 286
>gi|51596730|ref|YP_070921.1| flagellar motor protein MotA [Yersinia pseudotuberculosis IP 32953]
gi|153948045|ref|YP_001400613.1| flagellar motor protein MotA [Yersinia pseudotuberculosis IP 31758]
gi|170023988|ref|YP_001720493.1| flagellar motor protein MotA [Yersinia pseudotuberculosis YPIII]
gi|186895792|ref|YP_001872904.1| flagellar motor protein MotA [Yersinia pseudotuberculosis PB1/+]
gi|51590012|emb|CAH21645.1| chemotaxis MotA protein [Yersinia pseudotuberculosis IP 32953]
gi|152959540|gb|ABS47001.1| chemotaxis protein motA [Yersinia pseudotuberculosis IP 31758]
gi|169750522|gb|ACA68040.1| chemotaxis protein MotA [Yersinia pseudotuberculosis YPIII]
gi|186698818|gb|ACC89447.1| chemotaxis protein MotA [Yersinia pseudotuberculosis PB1/+]
Length = 295
Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 166/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+AGAG+G F++ N K IK + +
Sbjct: 1 MLVILGYLVVLGAVFGGYMLVGGHLGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATMRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P ++ +
Sbjct: 61 MPKLMRRSKYNKALYMDLMALLYRLLAKSRQQGMLSLERDIENPLESEIFSNYPRIMADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQESEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPASQA 290
>gi|22125716|ref|NP_669139.1| flagellar motor protein MotA [Yersinia pestis KIM 10]
gi|45441603|ref|NP_993142.1| flagellar motor protein MotA [Yersinia pestis biovar Microtus str.
91001]
gi|108807852|ref|YP_651768.1| flagellar motor protein MotA [Yersinia pestis Antiqua]
gi|108812128|ref|YP_647895.1| flagellar motor protein MotA [Yersinia pestis Nepal516]
gi|149366376|ref|ZP_01888410.1| chemotaxis MotA protein [Yersinia pestis CA88-4125]
gi|162419808|ref|YP_001607211.1| flagellar motor protein MotA [Yersinia pestis Angola]
gi|165925431|ref|ZP_02221263.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938506|ref|ZP_02227063.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008589|ref|ZP_02229487.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210492|ref|ZP_02236527.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401769|ref|ZP_02307260.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422607|ref|ZP_02314360.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426341|ref|ZP_02318094.1| chemotaxis protein motA [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167466605|ref|ZP_02331309.1| chemotaxis protein motA [Yersinia pestis FV-1]
gi|218928796|ref|YP_002346671.1| flagellar motor protein MotA [Yersinia pestis CO92]
gi|229841655|ref|ZP_04461813.1| chemotaxis MotA protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843772|ref|ZP_04463915.1| chemotaxis MotA protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229894515|ref|ZP_04509697.1| chemotaxis MotA protein [Yersinia pestis Pestoides A]
gi|229902448|ref|ZP_04517567.1| chemotaxis MotA protein [Yersinia pestis Nepal516]
gi|270490372|ref|ZP_06207446.1| flagellar motor stator protein MotA [Yersinia pestis KIM D27]
gi|294504145|ref|YP_003568207.1| flagellar motor protein [Yersinia pestis Z176003]
gi|21958634|gb|AAM85390.1|AE013785_3 proton conductor component of motor [Yersinia pestis KIM 10]
gi|45436464|gb|AAS62019.1| chemotaxis MotA protein [Yersinia pestis biovar Microtus str.
91001]
gi|108775776|gb|ABG18295.1| chemotaxis MotA protein [Yersinia pestis Nepal516]
gi|108779765|gb|ABG13823.1| chemotaxis MotA protein [Yersinia pestis Antiqua]
gi|115347407|emb|CAL20309.1| chemotaxis MotA protein [Yersinia pestis CO92]
gi|149290750|gb|EDM40825.1| chemotaxis MotA protein [Yersinia pestis CA88-4125]
gi|162352623|gb|ABX86571.1| chemotaxis protein motA [Yersinia pestis Angola]
gi|165913621|gb|EDR32241.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922540|gb|EDR39691.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992971|gb|EDR45272.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207672|gb|EDR52152.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958454|gb|EDR55475.1| chemotaxis protein motA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048874|gb|EDR60282.1| chemotaxis protein motA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054696|gb|EDR64500.1| chemotaxis protein motA [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680494|gb|EEO76591.1| chemotaxis MotA protein [Yersinia pestis Nepal516]
gi|229689380|gb|EEO81443.1| chemotaxis MotA protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694118|gb|EEO84166.1| chemotaxis MotA protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229703534|gb|EEO90551.1| chemotaxis MotA protein [Yersinia pestis Pestoides A]
gi|262362262|gb|ACY58983.1| flagellar motor protein [Yersinia pestis D106004]
gi|262366195|gb|ACY62752.1| flagellar motor protein [Yersinia pestis D182038]
gi|270338876|gb|EFA49653.1| flagellar motor stator protein MotA [Yersinia pestis KIM D27]
gi|294354604|gb|ADE64945.1| flagellar motor protein [Yersinia pestis Z176003]
gi|320014809|gb|ADV98380.1| chemotaxis MotA protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 295
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 166/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+AGAG+G F++ N K IK + +
Sbjct: 1 MLVILGYLVVLGAVFGGYTLVGGHLGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATMRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P ++ +
Sbjct: 61 MPKLMRRSKYNKALYMDLMALLYRLLAKSRQQGMLSLERDIENPLESEIFSNYPRIMADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQESEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPASQA 290
>gi|238785461|ref|ZP_04629445.1| hypothetical protein yberc0001_17850 [Yersinia bercovieri ATCC
43970]
gi|238713616|gb|EEQ05644.1| hypothetical protein yberc0001_17850 [Yersinia bercovieri ATCC
43970]
Length = 295
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 163/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F+ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYMIVGGHLGALYQPAEFLIIGGAGIGAFIAGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + Y D++ LLY L+ ++ E I++P S IF++ P +L +
Sbjct: 61 MPRLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIENPRESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 ILVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPVPQA 290
>gi|145599065|ref|YP_001163141.1| flagellar motor protein MotA [Yersinia pestis Pestoides F]
gi|145210761|gb|ABP40168.1| chemotaxis MotA protein [Yersinia pestis Pestoides F]
Length = 295
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 166/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+AGAG+G F++ N K IK + +
Sbjct: 1 MLVILGYLVVLGAVFGGYTLVGGHLGALYQPAEFLIIAGAGIGAFIVGNNGKAIKATMRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I++P S IF++ P ++ +
Sbjct: 61 MPKLIRRSKYNKALYMDLMALLYRLLAKSRQQGMLSLERDIENPLESEIFSNYPRIMADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQESEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPASQA 290
>gi|149928471|ref|ZP_01916706.1| putative chemotaxis (motility protein A) transmembrane [Limnobacter
sp. MED105]
gi|149822805|gb|EDM82056.1| putative chemotaxis (motility protein A) transmembrane [Limnobacter
sp. MED105]
Length = 328
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 100/286 (34%), Positives = 159/286 (55%), Gaps = 1/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I ++GGF MGG+ L QP E++I+ G LG F+++N ++K +G +
Sbjct: 42 MLVAIGFVIVIFSVLGGFAFMGGHLVTLWQPVEVLIIGGGALGAFIVSNTPSILKATGKA 101
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F A+ + Y ++ L+Y ++ ++K E +++P S +F P VL ++
Sbjct: 102 LGGAFKPSAITKAFYMSLMALMYEILTKVRKEGLMSIEGDVEEPEQSPLFQKYPEVLADH 161
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN EIENLMD E++ E P A+ M + LPA GIV A
Sbjct: 162 HIVEFLTDYLRLMVSGNLNPMEIENLMDGELETHHQEAHTPQSAVQQMADGLPAFGIVAA 221
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ MG++ Q S LG I +L GT LGI+L+Y PL S I + + +
Sbjct: 222 VMGVVHVMGSVGQVSNAELGVMIAAALVGTFLGILLAYGFVGPLASIINHKIAESSKPFE 281
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L+A +NG P +A+E+GRKVL +ERP+ + + V
Sbjct: 282 CVKTTLLASLNGYSPALAVEFGRKVLYSTERPTFIELEEHVKSTKG 327
>gi|238788296|ref|ZP_04632090.1| hypothetical protein yfred0001_7390 [Yersinia frederiksenii ATCC
33641]
gi|238723542|gb|EEQ15188.1| hypothetical protein yfred0001_7390 [Yersinia frederiksenii ATCC
33641]
Length = 295
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 164/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYIIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I+ P S IF++ P +L +
Sbjct: 61 MPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIESPLESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 VLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPAPQA 290
>gi|17989454|ref|NP_542087.1| flagellar motor protein MotA [Brucella melitensis bv. 1 str. 16M]
gi|189022345|ref|YP_001932086.1| flagellar motor protein MotA [Brucella abortus S19]
gi|297249976|ref|ZP_06933677.1| chemotaxis protein MotA [Brucella abortus bv. 5 str. B3196]
gi|17985333|gb|AAL54351.1| chemotaxis mota protein [Brucella melitensis bv. 1 str. 16M]
gi|189020919|gb|ACD73640.1| flagellar motor protein [Brucella abortus S19]
gi|297173845|gb|EFH33209.1| chemotaxis protein MotA [Brucella abortus bv. 5 str. B3196]
Length = 323
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 34 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 93
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 94 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 153
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 154 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 213
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 214 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 273
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 274 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 323
>gi|306837355|ref|ZP_07470234.1| flagellar motor protein MotA [Brucella sp. NF 2653]
gi|306407547|gb|EFM63747.1| flagellar motor protein MotA [Brucella sp. NF 2653]
Length = 323
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 153/290 (52%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 34 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 93
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 94 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 153
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKP+ A+ + E+LPA+GIV A
Sbjct: 154 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPHQAMITISEALPALGIVAA 213
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 214 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 273
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 274 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 323
>gi|322616923|gb|EFY13831.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618162|gb|EFY15054.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625832|gb|EFY22651.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626284|gb|EFY23094.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632698|gb|EFY29443.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322639042|gb|EFY35735.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640482|gb|EFY37135.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646009|gb|EFY42526.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322655477|gb|EFY51785.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660256|gb|EFY56494.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662936|gb|EFY59143.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668122|gb|EFY64281.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674118|gb|EFY70212.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675528|gb|EFY71602.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683058|gb|EFY79074.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686752|gb|EFY82730.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195357|gb|EFZ80537.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199249|gb|EFZ84344.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323204162|gb|EFZ89174.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207504|gb|EFZ92452.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211879|gb|EFZ96708.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217489|gb|EGA02208.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221976|gb|EGA06365.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323224727|gb|EGA08996.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231511|gb|EGA15624.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235953|gb|EGA20032.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240523|gb|EGA24566.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245415|gb|EGA29415.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323250186|gb|EGA34078.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253634|gb|EGA37462.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259385|gb|EGA43022.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323266190|gb|EGA49680.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270700|gb|EGA54141.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 295
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 101/288 (35%), Positives = 163/288 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN +EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNPFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
VK L++ +NG P +A+E+GRK L SERPS + + V + +
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQ 288
>gi|238795042|ref|ZP_04638636.1| hypothetical protein yinte0001_4560 [Yersinia intermedia ATCC
29909]
gi|238725643|gb|EEQ17203.1| hypothetical protein yinte0001_4560 [Yersinia intermedia ATCC
29909]
Length = 295
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 164/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GGN L QP E +I+ GAG+G F++ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVFGGYMIVGGNLGALYQPAEFLIIGGAGVGAFIVGNNGKAIKATIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I+ P S IF++ P +L +
Sbjct: 61 MPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIESPRESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPAPQA 290
>gi|218513717|ref|ZP_03510557.1| flagellar motor protein MotA [Rhizobium etli 8C-3]
Length = 282
Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats.
Identities = 165/282 (58%), Positives = 214/282 (75%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+T C++G F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +L E F +
Sbjct: 1 MTCGCVVGSFMAMGGHVEALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKALGEAFKHA 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ Y D L +LY LM +L+ SRNE E HID+P STIF PTVL+N ELT FICD
Sbjct: 61 VPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQQAPTVLKNKELTAFICD 120
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
Y+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A+LG+IKAM
Sbjct: 121 YVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAAVLGVIKAM 180
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+IVK+ L+AY
Sbjct: 181 AHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVIVKQTLLAY 240
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
MNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 MNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 282
>gi|238919360|ref|YP_002932875.1| flagellar motor protein MotA [Edwardsiella ictaluri 93-146]
gi|238868929|gb|ACR68640.1| chemotaxis protein MotA [Edwardsiella ictaluri 93-146]
Length = 301
Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats.
Identities = 101/290 (34%), Positives = 170/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + ++ + GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYAVVLIAVFGGYTLVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y DV+ L+Y L+ ++ E I+DP S IF++ P ++ +N
Sbjct: 61 LPRLARGSKYNKALYMDVMGLMYQLLAKSRQQGMLTLERDIEDPKESEIFSNYPRLIADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR+II GN ++EIE+LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLIEFITDYMRLIISGNMNAFEIESLMDEEIETFEQEAEVPAGSLAAVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASLMRQKSAETAKMMHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V Q + K +
Sbjct: 241 IKTTLLSSLNGYAPQIAVEFGRKTLYSTERPSFLELEEHVRQVKYPAKQA 290
>gi|296101765|ref|YP_003611911.1| flagellar motor protein MotA [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056224|gb|ADF60962.1| flagellar motor protein MotA [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 295
Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 165/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELIIIGGAGVGAFIVGNNGKSIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 MMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + + +
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPNQQT 290
>gi|283785635|ref|YP_003365500.1| chemotaxis protein MotA (motility protein A) [Citrobacter rodentium
ICC168]
gi|282949089|emb|CBG88695.1| chemotaxis protein MotA (motility protein A) [Citrobacter rodentium
ICC168]
Length = 294
Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 163/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYMMTGGHLGALYQPAEFVIIGGAGIGAFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ MG+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLALMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNSQT 290
>gi|30248077|ref|NP_840147.1| flagellar motor protein MotA [Nitrosomonas europaea ATCC 19718]
gi|30179962|emb|CAD83957.1| probable chemotaxis (motility protein A) transmembrane
[Nitrosomonas europaea ATCC 19718]
Length = 286
Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats.
Identities = 105/285 (36%), Positives = 161/285 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I+ + GGF GG+ L QP E++++AGA +G F + N K IK + +
Sbjct: 1 MLVAIGYVVVIVSVFGGFAMAGGHLGSLFQPVELIMIAGAAVGAFFVGNSGKAIKATFKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L IF + Y +++ LLY ++ ++K E +DDP S +F P +L ++
Sbjct: 61 LPYIFRDANYTKSVYMELMTLLYEILGKIRKEGLMSIEADVDDPGKSPLFGKYPKILSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T FI DY+R+++ GN EIENLMD EI+ E P H IS MG++LPA GIV A
Sbjct: 121 HATEFITDYLRLMVGGNLNPLEIENLMDGEIETHHQEGEVPVHVISKMGDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL ++++ + +L
Sbjct: 181 VMGVVHTMESVGIPPAELGKLIAAALVGTFLGILLAYGFIGPLANRLEQRLHESGKLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L+A +NG P +A+E+GRKVL +ERPS + + + Q
Sbjct: 241 VKVTLLANLNGYAPALAVEFGRKVLFSTERPSFAELEKHIKQSKA 285
>gi|114330217|ref|YP_746439.1| flagellar motor protein MotA [Nitrosomonas eutropha C91]
gi|114307231|gb|ABI58474.1| putative chemotaxis (motility protein A) transmembrane
[Nitrosomonas eutropha C91]
Length = 286
Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats.
Identities = 106/285 (37%), Positives = 161/285 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I+ + GGF GG+ L QP E++++AGA LG F + N K IK + +
Sbjct: 1 MLVTIGYLIVIVSVFGGFALAGGHLGSLFQPVELLMIAGAALGAFFVGNSGKAIKATFKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LLY ++ ++K E +DDP S +FT P +L ++
Sbjct: 61 LPGVFQGARYTKVVYMELMTLLYEVLGKIRKEGLMSIEADVDDPAKSPLFTKYPKILSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI DY+R+++ GN EIENLMD EI+ E P H I MG++LPA GIV A
Sbjct: 121 HAIEFITDYLRLMVGGNLNPLEIENLMDGEIETHHQEGEVPVHVIGKMGDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y +PL S+++ + +L
Sbjct: 181 VMGVVHTMASVGIPPAELGKLIAAALVGTFLGILLAYGFVSPLASRLEQRLHESSKLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A +NG P +A+E+GRKVL +ERPS + + V Q
Sbjct: 241 IKVTLLANLNGYAPALAVEFGRKVLFSTERPSFIELEKHVKQSKA 285
>gi|238764368|ref|ZP_04625318.1| hypothetical protein ykris0001_37310 [Yersinia kristensenii ATCC
33638]
gi|238697394|gb|EEP90161.1| hypothetical protein ykris0001_37310 [Yersinia kristensenii ATCC
33638]
Length = 295
Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 165/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK +
Sbjct: 1 MLVILGYIVVLGAVFGGYIIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKATLKV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I+ P S IF++ P +L +
Sbjct: 61 MPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLSLERDIESPLESEIFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEIPAGSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + +++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATLLRQQSAETNKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPAQQA 290
>gi|261821135|ref|YP_003259241.1| flagellar motor protein MotA [Pectobacterium wasabiae WPP163]
gi|261605148|gb|ACX87634.1| flagellar motor protein MotA [Pectobacterium wasabiae WPP163]
Length = 295
Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA LG F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAALGAFIVGNNGKAIKATVRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ LL+ +M ++ E ID+P S IF+S P +L ++
Sbjct: 61 LPLLFKGSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILSDS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A
Sbjct: 121 NIVEFITDYLRLMVSGNMNAFEIETLMDEEIETIEHESEIPASSLTMMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + + + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFTELEEHIRRVKSPTQQA 290
>gi|23499889|ref|NP_699329.1| flagellar motor protein MotA [Brucella suis 1330]
gi|254702554|ref|ZP_05164382.1| flagellar motor protein MotA [Brucella suis bv. 3 str. 686]
gi|254706316|ref|ZP_05168144.1| flagellar motor protein MotA [Brucella pinnipedialis M163/99/10]
gi|254711392|ref|ZP_05173203.1| flagellar motor protein MotA [Brucella pinnipedialis B2/94]
gi|256014916|ref|YP_003104925.1| flagellar motor protein [Brucella microti CCM 4915]
gi|256029978|ref|ZP_05443592.1| flagellar motor protein MotA [Brucella pinnipedialis M292/94/1]
gi|23463464|gb|AAN33334.1| chemotaxis motA protein [Brucella suis 1330]
gi|255997576|gb|ACU49263.1| flagellar motor protein [Brucella microti CCM 4915]
Length = 290
Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats.
Identities = 155/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|222084858|ref|YP_002543387.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
gi|221722306|gb|ACM25462.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
Length = 290
Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats.
Identities = 173/290 (59%), Positives = 222/290 (76%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T CIIG F AMGG+ L QPFE VI+AGAG+GGF+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFVVTCGCIIGSFMAMGGDVNALFQPFEFVIIAGAGIGGFIMANPMKVLKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P S IF + PTVL+N
Sbjct: 61 LGEAFRHAVPKERDYLDTLGVLYALMRDLRTKSRNEIEAHIDNPDESVIFQAAPTVLKNR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY+R+II+GNARS+EIE LMDEEI+ I ++K+KPYHAI+ MG+S PAIGIV A
Sbjct: 121 DLTAFICDYVRLIIIGNARSHEIEALMDEEINTIQHDKMKPYHAITIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM ++++SP++LG IG +L GT LGIILSYS+C PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMSHINESPEVLGHLIGSALVGTFLGIILSYSVCAPLVSQIKIVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISSYERPSIDAVEQEMMNPGGESKAA 290
>gi|256059631|ref|ZP_05449828.1| flagellar motor protein MotA [Brucella neotomae 5K33]
Length = 290
Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats.
Identities = 155/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAT 290
>gi|227112503|ref|ZP_03826159.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 295
Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA LG F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAALGAFIVGNNGKAIKATLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LL+ +M ++ E ID+P S IF+S P +L +N
Sbjct: 61 LPLLVKSSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A
Sbjct: 121 TVVEFITDYLRLMVSGNMNAFEIETLMDEEIETIEHESEVPASSLTMMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + + + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFTELEEHIRRVKSPTQQA 290
>gi|294635725|ref|ZP_06714191.1| chemotaxis MotA protein [Edwardsiella tarda ATCC 23685]
gi|291090937|gb|EFE23498.1| chemotaxis MotA protein [Edwardsiella tarda ATCC 23685]
Length = 296
Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + ++ + GG+ +GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYAVVLIAVFGGYALVGGHLGALYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y DV+ L+Y L+ ++ E I+DP +S IF++ P +L +
Sbjct: 61 LPKLARGSKYNKALYMDVMGLMYQLLAKSRQQGMLSLERDIEDPSSSDIFSNYPRLLADQ 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DYMR+II GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 TLIEFVTDYMRLIISGNMNAFEIEALMDEEIETFEQEAEVPAGSLAAVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASLMRQKSAETSKMMHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + V Q K +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFIELEEHVRQVKAPAKQA 290
>gi|170694366|ref|ZP_02885520.1| flagellar motor protein MotA [Burkholderia graminis C4D1M]
gi|187925788|ref|YP_001897430.1| flagellar motor protein MotA [Burkholderia phytofirmans PsJN]
gi|170140789|gb|EDT08963.1| flagellar motor protein MotA [Burkholderia graminis C4D1M]
gi|187716982|gb|ACD18206.1| flagellar motor protein MotA [Burkholderia phytofirmans PsJN]
Length = 286
Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 102/285 (35%), Positives = 171/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIVGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALNKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|319781689|ref|YP_004141165.1| flagellar motor protein MotA [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167577|gb|ADV11115.1| flagellar motor protein MotA [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 291
Score = 324 bits (832), Expect = 6e-87, Method: Composition-based stats.
Identities = 156/291 (53%), Positives = 212/291 (72%), Gaps = 1/291 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL +T+ C++GGF AMGG+ ++LIQP+E VI+ GA G F++ANP+K +KD+G
Sbjct: 1 MGILIGLVVTLGCVLGGFMAMGGHLHVLIQPWEAVIICGAAFGTFLVANPMKTVKDTGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+LE F + Y + L +L+ LM L+ SR+E E HID+P S IF + PTVL N+
Sbjct: 61 ILEAFKQAVPKEQDYLETLGVLHSLMRELRSKSRSEVEAHIDNPEESAIFQAFPTVLHNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+II+GNARS+EIE LMDEEI I +K+K YHA+ +G+ LPA+GIV A
Sbjct: 121 DLTHFICDYCRIIIIGNARSHEIEALMDEEIQTIRSDKMKAYHAMVAVGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG L QSP+ILG IG +L GT LGI LSYS+ P+ ++IK+ R K++RLYII
Sbjct: 181 VLGVVKAMGALDQSPEILGGLIGAALVGTFLGIFLSYSVVGPVATKIKTVREKKNRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH-NKKAS 290
VK+ L+AYMNGA+PQVAIE+GRK + ERP+I+ V Q + KKA+
Sbjct: 241 VKQTLLAYMNGALPQVAIEFGRKTISSYERPTIDAVEQSTMNTGTVEKKAA 291
>gi|307731389|ref|YP_003908613.1| flagellar motor protein MotA [Burkholderia sp. CCGE1003]
gi|323527739|ref|YP_004229892.1| flagellar motor protein MotA [Burkholderia sp. CCGE1001]
gi|307585924|gb|ADN59322.1| flagellar motor protein MotA [Burkholderia sp. CCGE1003]
gi|323384741|gb|ADX56832.1| flagellar motor protein MotA [Burkholderia sp. CCGE1001]
Length = 286
Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats.
Identities = 102/285 (35%), Positives = 171/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIVGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALTKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|60115452|dbj|BAD90018.1| MotA [Pectobacterium carotovorum subsp. carotovorum]
Length = 295
Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAAVGAFIVGNNGKAIKATLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LL+ +M ++ E ID+P S IF+S P +L +N
Sbjct: 61 LPLLVKSSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A
Sbjct: 121 TVVEFITDYLRLMVSGNMNAFEIETLMDEEIETIEHESEVPASSLTMMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + + + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFTELEEHIRRVKSPTQQA 290
>gi|161502955|ref|YP_001570067.1| flagellar motor protein MotA [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160864302|gb|ABX20925.1| hypothetical protein SARI_01017 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 295
Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats.
Identities = 101/288 (35%), Positives = 164/288 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKTMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
VK L++ +NG P +A+E+GRK L SERPS + + V + +
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQ 288
>gi|254699437|ref|ZP_05161265.1| flagellar motor protein MotA [Brucella suis bv. 5 str. 513]
Length = 290
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++ QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVAEQETMASVPTQQAA 290
>gi|253688989|ref|YP_003018179.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755567|gb|ACT13643.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 295
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAAVGAFIVGNNGKAIKATLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LL+ +M ++ E ID+P S IF+S P +L +N
Sbjct: 61 LPLLVKSSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A
Sbjct: 121 TVVEFITDYLRLMVSGNMNAFEIETLMDEEIETIEHESEVPATSLTLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + + + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFTELEEHIRRVKSPTQQA 290
>gi|330821028|ref|YP_004349890.1| Flagellar motor component-like protein [Burkholderia gladioli BSR3]
gi|327373023|gb|AEA64378.1| Flagellar motor component-like protein [Burkholderia gladioli BSR3]
Length = 288
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 99/287 (34%), Positives = 158/287 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + +IG F +GG+ L+QPFE++ + GA G FV++NP + + S
Sbjct: 1 MFVAIGWIVVLASVIGSFVGVGGHLPALLQPFELLCIFGAAAGAFVVSNPRDTLGKTLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + Y +++ LLY L+ ++ E+ I++P NS +F P VL ++
Sbjct: 61 LPSCFKSTSYTKTQYLELIALLYELLQKARRDGMLSLESDIENPANSPLFQKYPHVLGDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE++ E AI M + LPA GIV A
Sbjct: 121 HLLDFIIDYLRMMSTGNLNPLEMQDLMDEELETHHAEVSVAPSAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAELGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRNSAKPFHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
VK L+A ++G P VA+E+GRKVL ++RPS + + + V +K
Sbjct: 241 VKAVLLASLSGYAPAVAVEFGRKVLFTADRPSFQELDEAVRATKTSK 287
>gi|197285529|ref|YP_002151401.1| flagellar motor protein MotA [Proteus mirabilis HI4320]
gi|227356024|ref|ZP_03840415.1| motility protein A [Proteus mirabilis ATCC 29906]
gi|194683016|emb|CAR43483.1| chemotaxis protein (motility protein A) [Proteus mirabilis HI4320]
gi|227163801|gb|EEI48709.1| motility protein A [Proteus mirabilis ATCC 29906]
Length = 297
Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 102/289 (35%), Positives = 167/289 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I ++GGF +GG+ L QP E +I+ GAG+G FV+ N + I +
Sbjct: 1 MLVLLGYIVVICAVLGGFTLVGGHLGALYQPAEFLIIFGAGIGAFVVGNNGRAIVSTVKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ L++ L+ ++ E I++P S IF+ P ++++
Sbjct: 61 LPKLLRNTNYNKAMYMDLMALMFRLLSKARQNGMLALERDIENPQQSDIFSQYPRIMKDV 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +FI DYMR+++ GN YEIE LMDEEI E P +S MG+SLPA GIV A
Sbjct: 121 YMLSFITDYMRLMVTGNMNPYEIEALMDEEIATFEEESEVPAAGLSTMGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G + +G IG ++ GT LGI+L+Y +PL S+I+ +Q ++
Sbjct: 181 VMGVVNALGAADRPAGEMGALIGHAMVGTFLGILLAYGFVSPLASRIRQRSSQQMKMMEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+K L++ MNG PQ+A+E+GRK L L++RPS + + V Q +A
Sbjct: 241 IKTTLLSSMNGYAPQIAVEFGRKTLFLADRPSFIELEEHVRQVRTPMQA 289
>gi|91785661|ref|YP_560867.1| flagellar motor protein MotA [Burkholderia xenovorans LB400]
gi|296157482|ref|ZP_06840317.1| flagellar motor protein MotA [Burkholderia sp. Ch1-1]
gi|91689615|gb|ABE32815.1| Chemotaxis protein MotA [Burkholderia xenovorans LB400]
gi|295892254|gb|EFG72037.1| flagellar motor protein MotA [Burkholderia sp. Ch1-1]
Length = 286
Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 102/285 (35%), Positives = 170/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIVGAGIGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALNKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|218548502|ref|YP_002382293.1| flagellar motor protein MotA [Escherichia fergusonii ATCC 35469]
gi|218356043|emb|CAQ88659.1| proton conductor component of flagella motor [Escherichia
fergusonii ATCC 35469]
gi|324113676|gb|EGC07651.1| chemotaxis protein motA [Escherichia fergusonii B253]
gi|325496922|gb|EGC94781.1| flagellar motor protein MotA [Escherichia fergusonii ECD227]
Length = 295
Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 105/290 (36%), Positives = 167/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLIILGYLVVIGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGAFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYSKAMYMDLLALLYRLMAKSRQQGMFSLERDIENPQESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ S+EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNSFEIEALMDEEIETHESEAEVPANSLAIVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLAGVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + + +
Sbjct: 241 VKVTLLSSLNGYAPPIAVEFGRKTLYSSERPSFVELEEHVRAVKNPNQQA 290
>gi|16765265|ref|NP_460880.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56413158|ref|YP_150233.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62180500|ref|YP_216917.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161613517|ref|YP_001587482.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167552437|ref|ZP_02346190.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167994229|ref|ZP_02575321.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168234011|ref|ZP_02659069.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168238557|ref|ZP_02663615.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168241556|ref|ZP_02666488.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259798|ref|ZP_02681771.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168462542|ref|ZP_02696473.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168820751|ref|ZP_02832751.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444912|ref|YP_002041190.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450514|ref|YP_002045978.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194468783|ref|ZP_03074767.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735541|ref|YP_002114960.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248635|ref|YP_002146097.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197265988|ref|ZP_03166062.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198243470|ref|YP_002215159.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389572|ref|ZP_03216183.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204931070|ref|ZP_03221896.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|224583573|ref|YP_002637371.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912500|ref|ZP_04656337.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|2494510|sp|P55891|MOTA_SALTY RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|1764127|gb|AAC45265.1| MotA [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|6045177|dbj|BAA85316.1| MotA protein [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|16420460|gb|AAL20839.1| proton conductor component of motor [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56127415|gb|AAV76921.1| motility protein A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62128133|gb|AAX65836.1| proton conductor component of motor, torque generator [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161362881|gb|ABX66649.1| hypothetical protein SPAB_01237 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403575|gb|ACF63797.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408818|gb|ACF69037.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194455147|gb|EDX43986.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194711043|gb|ACF90264.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195634498|gb|EDX52850.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197212338|gb|ACH49735.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197244243|gb|EDY26863.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288649|gb|EDY28024.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937986|gb|ACH75319.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602017|gb|EDZ00563.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320114|gb|EDZ05319.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205322878|gb|EDZ10717.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205327857|gb|EDZ14621.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205331990|gb|EDZ18754.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205339404|gb|EDZ26168.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342756|gb|EDZ29520.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350824|gb|EDZ37455.1| chemotaxis protein MotA [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|224468100|gb|ACN45930.1| flagellar motor protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|267993910|gb|ACY88795.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|312912917|dbj|BAJ36891.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085457|emb|CBY95238.1| Chemotaxis protein motA Motility protein A [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224567|gb|EFX49630.1| Flagellar motor rotation protein MotA [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322714976|gb|EFZ06547.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323130207|gb|ADX17637.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326622908|gb|EGE29253.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326627425|gb|EGE33768.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332988816|gb|AEF07799.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 295
Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 101/288 (35%), Positives = 164/288 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
VK L++ +NG P +A+E+GRK L SERPS + + V + +
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQ 288
>gi|13472568|ref|NP_104135.1| flagellar motor protein MotA [Mesorhizobium loti MAFF303099]
gi|14023314|dbj|BAB49921.1| flagellar motor protein; MotA [Mesorhizobium loti MAFF303099]
Length = 291
Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats.
Identities = 151/290 (52%), Positives = 212/290 (73%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL +T+ C++GGF AMGG+ ++L+QP+E V++ GA LG F++ANP+K +KD+G
Sbjct: 1 MGILIGLVVTLGCVLGGFMAMGGHLHVLVQPWEAVVICGAALGTFLVANPMKTVKDTGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+LE F + Y + L +L+ LM L+ SR+E E HID+P S IF + PTVL+N+
Sbjct: 61 ILEAFKQAVPKEQDYLETLGVLHSLMRELRSKSRSEVEAHIDNPEESAIFQAFPTVLKNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICDY R+II+GNARS+EIE LMDEEI I +K+K YHA+ +G+ LPA+GIV A
Sbjct: 121 DLMNFICDYCRIIIIGNARSHEIEALMDEEIQTIRSDKMKAYHALVAVGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG L QSP+ILG IG +L GT LGI LSY++ P+ ++IK+ R K++RLYII
Sbjct: 181 VLGVVKAMGALDQSPEILGGLIGAALVGTFLGIFLSYAVVGPVATKIKTVREKKNRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGA+PQVAIE+GRK + ERP+I+ V Q + +K +
Sbjct: 241 VKQTLLAYMNGALPQVAIEFGRKTISSYERPTIDAVEQSTMNTGSAEKKA 290
>gi|253990167|ref|YP_003041523.1| flagellar motor protein MotA [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781617|emb|CAQ84780.1| chemotaxis mota protein [Photorhabdus asymbiotica]
Length = 295
Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats.
Identities = 98/286 (34%), Positives = 162/286 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + +IGG+ +GG+ L QP E +I+ GAG+G F++ N K IK +
Sbjct: 1 MLVLLGYIVVFGAVIGGYLIVGGHLGALYQPAEFLIITGAGIGAFIVGNNGKAIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ LL+ L+ ++ E I+ P S IFT P +L++
Sbjct: 61 LPKVMRRSKYNKVMYMDLMALLFRLLAKSRQHGVLALERDIEHPQQSDIFTQYPRLLKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR+I+ GN +EIE LMDEEI+ E P ++ +G+SLPA GIV A
Sbjct: 121 HLMDFITDYMRLIVSGNMNPHEIEALMDEEIETYEQESEIPATSLMMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVNALGSADRPAGELGALIAHAMVGTFLGILLAYGFISPLATLLRQRSGEHIKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+K L++ +NG PQ+A+E+GRK L L++RPS + + V +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYLTDRPSFTELEEHVRRVKAP 286
>gi|254711991|ref|ZP_05173802.1| flagellar motor protein MotA [Brucella ceti M644/93/1]
gi|254715061|ref|ZP_05176872.1| flagellar motor protein MotA [Brucella ceti M13/05/1]
Length = 290
Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K + LYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNCLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|256111965|ref|ZP_05452916.1| flagellar motor protein MotA [Brucella melitensis bv. 3 str. Ether]
Length = 290
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 155/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE L ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETLASVPTQQAA 290
>gi|254695268|ref|ZP_05157096.1| flagellar motor protein MotA [Brucella abortus bv. 3 str. Tulya]
Length = 290
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEI+ LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIDALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|62317078|ref|YP_222931.1| flagellar motor protein MotA [Brucella abortus bv. 1 str. 9-941]
gi|83269071|ref|YP_418362.1| flagellar motor protein MotA [Brucella melitensis biovar Abortus
2308]
gi|225685987|ref|YP_002733959.1| flagellar motor protein MotA [Brucella melitensis ATCC 23457]
gi|254691433|ref|ZP_05154687.1| flagellar motor protein MotA [Brucella abortus bv. 6 str. 870]
gi|254698367|ref|ZP_05160195.1| flagellar motor protein MotA [Brucella abortus bv. 2 str. 86/8/59]
gi|254731812|ref|ZP_05190390.1| flagellar motor protein MotA [Brucella abortus bv. 4 str. 292]
gi|256043049|ref|ZP_05445994.1| flagellar motor protein MotA [Brucella melitensis bv. 1 str. Rev.1]
gi|256256619|ref|ZP_05462155.1| flagellar motor protein MotA [Brucella abortus bv. 9 str. C68]
gi|62197271|gb|AAX75570.1| chemotaxis motA protein [Brucella abortus bv. 1 str. 9-941]
gi|82939345|emb|CAJ12292.1| Flagellar motor protein MotA [Brucella melitensis biovar Abortus
2308]
gi|225642092|gb|ACO02005.1| chemotaxis motA protein [Brucella melitensis ATCC 23457]
Length = 290
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|37525778|ref|NP_929122.1| flagellar motor protein MotA [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785207|emb|CAE14142.1| chemotaxis protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 295
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 98/288 (34%), Positives = 162/288 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + +IGG+ +GG+ L QP E +I+ GAG+G F++ N K IK +
Sbjct: 1 MLVLLGYIVVFGAVIGGYLIVGGHLGALYQPAEFLIITGAGIGAFIVGNNGKAIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ LL+ L+ + E I+ P S IFT P +L++
Sbjct: 61 LPKVMRRSKYNKVMYMDLMALLFRLLAKSRMHGVLALERDIEHPQQSDIFTQYPRLLKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR+I+ GN +EIE LMDEEI+ E P ++ +G+SLPA GIV A
Sbjct: 121 HLMDFITDYMRLIVSGNMNPHEIEALMDEEIETYEQESEIPATSLMMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVNALGSADRPAGELGVLIAHAMVGTFLGILLAYGFISPLATLLRQRSGEHLKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+K L++ +NG PQ+A+E+GRK L L++RPS + + V + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYLTDRPSFTELEEHVRRVKAPVQ 288
>gi|209515723|ref|ZP_03264586.1| flagellar motor protein MotA [Burkholderia sp. H160]
gi|209503750|gb|EEA03743.1| flagellar motor protein MotA [Burkholderia sp. H160]
Length = 286
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 104/285 (36%), Positives = 171/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++AGAGLG F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIAGAGLGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 IPTLFKGAKYNKDVYMELMGLLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALTKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|313200597|ref|YP_004039255.1| flagellar motor protein mota [Methylovorus sp. MP688]
gi|312439913|gb|ADQ84019.1| flagellar motor protein MotA [Methylovorus sp. MP688]
Length = 278
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 94/277 (33%), Positives = 160/277 (57%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ + + GG+ GG+ L QP E++++ G +G F++ N K +K + +L +F
Sbjct: 1 MVLAAVFGGYALAGGHLGALWQPLEVLMIFGGAIGAFIVGNNGKALKATLGALPTLFKGS 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ Y D+L LL+ ++ ++K EN +++P +S +F+ P + ++ L FI D
Sbjct: 61 KFTKALYMDLLALLFEILSKIRKDGMMSIENDVENPESSPLFSKYPALQADHHLMEFITD 120
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
Y+R++I GN ++++ENLMD EI+ E P H I+ +G+ LPA GIV A++G++ M
Sbjct: 121 YLRLMISGNMDAFQVENLMDNEIETHHQEGHVPVHCIARLGDGLPAFGIVAAVMGVVHTM 180
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
N++ P LG I +L GT LGI+L+Y PL+S ++ + ++Y VK L+A
Sbjct: 181 ENVALPPAELGILIAHALVGTFLGILLAYGFIGPLSSLLEQKLDESTKMYQTVKATLLAS 240
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+NG P +A+E+GRKVL +ERP + + V Q
Sbjct: 241 LNGYAPAIAVEFGRKVLYSTERPGFTELEEHVKQAKS 277
>gi|254720631|ref|ZP_05182442.1| flagellar motor protein MotA [Brucella sp. 83/13]
Length = 290
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 1 MGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 61 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKP+ A+ + E+LPA+GIV A
Sbjct: 121 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPHQAMITISEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 241 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 290
>gi|238751744|ref|ZP_04613232.1| hypothetical protein yrohd0001_35130 [Yersinia rohdei ATCC 43380]
gi|238710015|gb|EEQ02245.1| hypothetical protein yrohd0001_35130 [Yersinia rohdei ATCC 43380]
Length = 295
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 163/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + ++GG+ +GG+ L QP E +I+ GAG+G F+ N K IK + +
Sbjct: 1 MLVILGYIVVLGAVLGGYSIVGGHLGALYQPAEFLIIGGAGIGAFIAGNNGKAIKATIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D++ LLY L+ ++ E I+ P S IF++ P VL +
Sbjct: 61 MPKLMRRSKYNKILYMDLMALLYRLLAKSRQQGMLSLERDIESPLESEIFSNYPRVLADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I+ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 LLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQECEVPAGSLAVVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVNTLAAADRPAAELGALIAHAMVGTFLGILLAYGFVSPLATLLRQQSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG PQ+A+E+GRK L +ERPS + + V + + +
Sbjct: 241 VKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIELEEHVRRVKAPAQQA 290
>gi|16760872|ref|NP_456489.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141436|ref|NP_804778.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213163276|ref|ZP_03348986.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213622330|ref|ZP_03375113.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647164|ref|ZP_03377217.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213855851|ref|ZP_03384091.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|25298881|pir||AG0746 motility protein A [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16503169|emb|CAD05674.1| motility protein A [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137063|gb|AAO68627.1| motility protein A [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 295
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 101/288 (35%), Positives = 164/288 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGMGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
VK L++ +NG P +A+E+GRK L SERPS + + V + +
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQ 288
>gi|317403795|gb|EFV84275.1| chemotaxis protein MotA [Achromobacter xylosoxidans C54]
Length = 289
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 112/289 (38%), Positives = 170/289 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I+ +IG F A+GG+ L QPFE+ ++ GA G F+ N K + +
Sbjct: 1 MLIVIGFLVVIVSVIGSFVALGGHMGALYQPFELTLIFGAAFGAFLAGNSKKSLMLVKKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G+D Y +++ LLY+L+ ++ E+HI+DP +S IF+ P + ++
Sbjct: 61 LPDTLKSSRYGKDVYMELMALLYVLLNKARREGLMAIESHIEDPASSPIFSEYPRIAKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P I M + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPASMIRQMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P ILG I ++ GT LGI+L+Y PL S+I+ + ++
Sbjct: 181 VLGVIKALAAVDQPPAILGDLISKAMVGTFLGILLAYGFVGPLASRIERRTDEAMKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+K L+A MNG PQ+A+E+GRKVL S RP+ + + V Q KA
Sbjct: 241 IKTTLLASMNGYPPQLAVEFGRKVLYSSVRPTFGELEEHVRQTKSTAKA 289
>gi|50120621|ref|YP_049788.1| flagellar motor protein MotA [Pectobacterium atrosepticum SCRI1043]
gi|49611147|emb|CAG74593.1| chemotaxis protein [Pectobacterium atrosepticum SCRI1043]
Length = 295
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 94/290 (32%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAAIGAFIVGNNGKAIKATIRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ LL+ +M ++ E ID+P S IF+S P +L +N
Sbjct: 61 LPLLIKSSKYNKALYMDLMALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILSDN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 NIVEFITDYLRLMVSGNMNAFEIETLMDEEIETVEHESEVPASSLTMMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL + ++ ++ ++
Sbjct: 181 VMGVVHSLAYVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L +ERPS + + + + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSFTELEEHIRRVKSPTQQA 290
>gi|157371227|ref|YP_001479216.1| flagellar motor protein MotA [Serratia proteamaculans 568]
gi|157322991|gb|ABV42088.1| chemotaxis protein MotA [Serratia proteamaculans 568]
Length = 298
Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats.
Identities = 95/289 (32%), Positives = 168/289 (58%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
I+G + + + GG+ +GG+ L QP E +I+ GAG+G F++ N K IK + ++
Sbjct: 4 LVILGYLVVLGAVFGGYLIVGGHLGALYQPAEFLIIGGAGIGAFIVGNNGKAIKSTLRAI 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++ +D Y D++ LL++L+ ++ E ID+P S IF++ P +L +N
Sbjct: 64 PKLMRRSKYSKDLYMDLMALLFLLLAKSRQQGMLSLEFDIDNPQESEIFSNYPRILADNT 123
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L FI DY+R+++ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A+
Sbjct: 124 LVEFITDYLRLMVSGNMNAFEIEALMDEEIETFEQESEVPAGSLAMVGDSLPAFGIVAAV 183
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ + ++ +
Sbjct: 184 MGVVHALASADRPAAELGALIANAMVGTFLGILLAYGFISPLATLLRQKSAENVKMMQCI 243
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
K L++ +NG PQ+A+E+GRK L +ERPS + + V + + +
Sbjct: 244 KVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFVELEEHVRRVKAPAQQA 292
>gi|260568538|ref|ZP_05839007.1| flagellar motor protein [Brucella suis bv. 4 str. 40]
gi|261313763|ref|ZP_05952960.1| flagellar motor protein MotA [Brucella pinnipedialis M163/99/10]
gi|261318998|ref|ZP_05958195.1| flagellar motor protein MotA [Brucella pinnipedialis B2/94]
gi|261753132|ref|ZP_05996841.1| flagellar motor protein MotA [Brucella suis bv. 3 str. 686]
gi|265986999|ref|ZP_06099556.1| flagellar motor protein MotA [Brucella pinnipedialis M292/94/1]
gi|294853150|ref|ZP_06793822.1| chemotaxis protein MotA [Brucella sp. NVSL 07-0026]
gi|306841069|ref|ZP_07473792.1| flagellar motor protein MotA [Brucella sp. BO2]
gi|260155203|gb|EEW90284.1| flagellar motor protein [Brucella suis bv. 4 str. 40]
gi|261298221|gb|EEY01718.1| flagellar motor protein MotA [Brucella pinnipedialis B2/94]
gi|261302789|gb|EEY06286.1| flagellar motor protein MotA [Brucella pinnipedialis M163/99/10]
gi|261742885|gb|EEY30811.1| flagellar motor protein MotA [Brucella suis bv. 3 str. 686]
gi|264659196|gb|EEZ29457.1| flagellar motor protein MotA [Brucella pinnipedialis M292/94/1]
gi|294818805|gb|EFG35805.1| chemotaxis protein MotA [Brucella sp. NVSL 07-0026]
gi|306288907|gb|EFM60210.1| flagellar motor protein MotA [Brucella sp. BO2]
Length = 296
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|261323601|ref|ZP_05962798.1| flagellar motor protein MotA [Brucella neotomae 5K33]
gi|261299581|gb|EEY03078.1| flagellar motor protein MotA [Brucella neotomae 5K33]
Length = 296
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAT 296
>gi|300904778|ref|ZP_07122606.1| flagellar motor protein MotA [Escherichia coli MS 84-1]
gi|301305234|ref|ZP_07211331.1| flagellar motor protein MotA [Escherichia coli MS 124-1]
gi|300403292|gb|EFJ86830.1| flagellar motor protein MotA [Escherichia coli MS 84-1]
gi|300839440|gb|EFK67200.1| flagellar motor protein MotA [Escherichia coli MS 124-1]
gi|315257276|gb|EFU37244.1| flagellar motor protein MotA [Escherichia coli MS 85-1]
Length = 295
Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GGN L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGNLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|237731927|ref|ZP_04562408.1| motility protein A [Citrobacter sp. 30_2]
gi|226907466|gb|EEH93384.1| motility protein A [Citrobacter sp. 30_2]
Length = 295
Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats.
Identities = 102/286 (35%), Positives = 163/286 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYMMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKAMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
VK L++ +NG P +A+E+GRK L SERPS + + V +
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNP 286
>gi|271500048|ref|YP_003333073.1| flagellar motor protein MotA [Dickeya dadantii Ech586]
gi|270343603|gb|ACZ76368.1| flagellar motor protein MotA [Dickeya dadantii Ech586]
Length = 295
Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TI I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYLVTIGSILGGYLIVGGELGALYQPSELLIIGGAAVGAFIVGNNAKAIKATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ +L+ LM ++ E ID+P S IF++ P +L +N
Sbjct: 61 LPVLFQGSKYTKAVYMDLMAVLFRLMAKSRQQGMLSLEFDIDNPKESEIFSNYPRILADN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 YIVEFVTDYLRLMVSGNMNAFEIETLMDEEIETVEHEVEVPATSLNLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHSLAFVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLASLLRQKNSEKLKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L + RPS + + + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTVRPSFTEMEEHIRNVKAPAQQA 290
>gi|134294328|ref|YP_001118063.1| flagellar motor protein MotA [Burkholderia vietnamiensis G4]
gi|134137485|gb|ABO53228.1| chemotaxis MotA protein [Burkholderia vietnamiensis G4]
Length = 286
Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats.
Identities = 105/285 (36%), Positives = 172/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIVGAGVGAFILGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYNKDVYMELMGLLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEAPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL+S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLSSLAEQRVAEATKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFNELEEHVRRVKA 285
>gi|301018262|ref|ZP_07182775.1| flagellar motor protein MotA [Escherichia coli MS 69-1]
gi|300399772|gb|EFJ83310.1| flagellar motor protein MotA [Escherichia coli MS 69-1]
Length = 295
Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADC 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|251789150|ref|YP_003003871.1| flagellar motor protein MotA [Dickeya zeae Ech1591]
gi|247537771|gb|ACT06392.1| flagellar motor protein MotA [Dickeya zeae Ech1591]
Length = 295
Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats.
Identities = 94/290 (32%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TI I+GG+ +GG L QP E++I+ GA +G F++ N K IK + +
Sbjct: 1 MLVILGYLVTIGSILGGYLIVGGELGALYQPSELLIIGGAAVGAFIVGNNAKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ +L+ LM ++ E ID+P S IF++ P +L ++
Sbjct: 61 LPVLFQGSKYTKAVYMDLMAVLFRLMAKSRQQGMLSLEFDIDNPKESEIFSNYPRILSDD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 YIVEFVTDYLRLMVSGNMNAFEIETLMDEEIETVEHEVEVPATSLNLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHSLAFVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLASLLRQKNSEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L + RPS + + + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTVRPSFTEMEEHIRNVKAPAQQA 290
>gi|157156438|ref|YP_001463196.1| flagellar motor protein MotA [Escherichia coli E24377A]
gi|170681052|ref|YP_001743352.1| flagellar motor protein MotA [Escherichia coli SMS-3-5]
gi|191168080|ref|ZP_03029879.1| chemotaxis protein MotA [Escherichia coli B7A]
gi|194429332|ref|ZP_03061858.1| chemotaxis protein MotA [Escherichia coli B171]
gi|194434129|ref|ZP_03066398.1| chemotaxis protein MotA [Shigella dysenteriae 1012]
gi|209919316|ref|YP_002293400.1| flagellar motor protein MotA [Escherichia coli SE11]
gi|256022445|ref|ZP_05436310.1| flagellar motor protein MotA [Escherichia sp. 4_1_40B]
gi|260868488|ref|YP_003234890.1| proton conductor component MotA [Escherichia coli O111:H- str.
11128]
gi|293410202|ref|ZP_06653778.1| conserved hypothetical protein [Escherichia coli B354]
gi|293415205|ref|ZP_06657848.1| chemotaxis protein MotA [Escherichia coli B185]
gi|300917527|ref|ZP_07134184.1| flagellar motor protein MotA [Escherichia coli MS 115-1]
gi|300924983|ref|ZP_07140908.1| flagellar motor protein MotA [Escherichia coli MS 182-1]
gi|301327681|ref|ZP_07220888.1| flagellar motor protein MotA [Escherichia coli MS 78-1]
gi|307314198|ref|ZP_07593808.1| proton conductor component MotA [Escherichia coli W]
gi|309795999|ref|ZP_07690412.1| flagellar motor protein MotA [Escherichia coli MS 145-7]
gi|331653300|ref|ZP_08354305.1| chemotaxis protein MotA [Escherichia coli M718]
gi|331668587|ref|ZP_08369435.1| chemotaxis protein MotA [Escherichia coli TA271]
gi|157078468|gb|ABV18176.1| chemotaxis protein MotA [Escherichia coli E24377A]
gi|170518770|gb|ACB16948.1| chemotaxis protein MotA [Escherichia coli SMS-3-5]
gi|190901878|gb|EDV61628.1| chemotaxis protein MotA [Escherichia coli B7A]
gi|194412639|gb|EDX28935.1| chemotaxis protein MotA [Escherichia coli B171]
gi|194417673|gb|EDX33773.1| chemotaxis protein MotA [Shigella dysenteriae 1012]
gi|209912575|dbj|BAG77649.1| proton conductor component of motor [Escherichia coli SE11]
gi|257764844|dbj|BAI36339.1| proton conductor component MotA [Escherichia coli O111:H- str.
11128]
gi|284921809|emb|CBG34882.1| chemotaxis protein MotA (motility protein A) [Escherichia coli 042]
gi|291432853|gb|EFF05832.1| chemotaxis protein MotA [Escherichia coli B185]
gi|291470670|gb|EFF13154.1| conserved hypothetical protein [Escherichia coli B354]
gi|300415232|gb|EFJ98542.1| flagellar motor protein MotA [Escherichia coli MS 115-1]
gi|300418858|gb|EFK02169.1| flagellar motor protein MotA [Escherichia coli MS 182-1]
gi|300845776|gb|EFK73536.1| flagellar motor protein MotA [Escherichia coli MS 78-1]
gi|306906167|gb|EFN36685.1| proton conductor component MotA [Escherichia coli W]
gi|308120449|gb|EFO57711.1| flagellar motor protein MotA [Escherichia coli MS 145-7]
gi|315061196|gb|ADT75523.1| proton conductor component of flagella motor [Escherichia coli W]
gi|320177400|gb|EFW52401.1| Flagellar motor rotation protein MotA [Shigella dysenteriae CDC
74-1112]
gi|320178161|gb|EFW53138.1| Flagellar motor rotation protein MotA [Shigella boydii ATCC 9905]
gi|320198586|gb|EFW73186.1| Flagellar motor rotation protein MotA [Escherichia coli EC4100B]
gi|323158624|gb|EFZ44638.1| chemotaxis protein motA [Escherichia coli E128010]
gi|323180689|gb|EFZ66234.1| chemotaxis protein motA [Escherichia coli 1180]
gi|323186333|gb|EFZ71683.1| chemotaxis protein motA [Escherichia coli 1357]
gi|323378227|gb|ADX50495.1| flagellar motor protein MotA [Escherichia coli KO11]
gi|323968312|gb|EGB63719.1| chemotaxis protein MotA [Escherichia coli M863]
gi|323977925|gb|EGB73011.1| chemotaxis protein MotA [Escherichia coli TW10509]
gi|324017972|gb|EGB87191.1| flagellar motor protein MotA [Escherichia coli MS 117-3]
gi|324118950|gb|EGC12839.1| chemotaxis protein MotA [Escherichia coli E1167]
gi|327253020|gb|EGE64674.1| chemotaxis protein motA [Escherichia coli STEC_7v]
gi|331049398|gb|EGI21470.1| chemotaxis protein MotA [Escherichia coli M718]
gi|331063781|gb|EGI35692.1| chemotaxis protein MotA [Escherichia coli TA271]
Length = 295
Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|26248157|ref|NP_754197.1| flagellar motor protein MotA [Escherichia coli CFT073]
gi|300994030|ref|ZP_07180649.1| flagellar motor protein MotA [Escherichia coli MS 45-1]
gi|26108561|gb|AAN80764.1|AE016762_17 Chemotaxis motA protein [Escherichia coli CFT073]
gi|300406398|gb|EFJ89936.1| flagellar motor protein MotA [Escherichia coli MS 45-1]
gi|315290319|gb|EFU49695.1| flagellar motor protein MotA [Escherichia coli MS 153-1]
Length = 295
Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats.
Identities = 104/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GGN L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGNLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|331673415|ref|ZP_08374183.1| chemotaxis protein MotA [Escherichia coli TA280]
gi|331069613|gb|EGI41000.1| chemotaxis protein MotA [Escherichia coli TA280]
Length = 295
Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALAGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|260844300|ref|YP_003222078.1| proton conductor component MotA [Escherichia coli O103:H2 str.
12009]
gi|257759447|dbj|BAI30944.1| proton conductor component MotA [Escherichia coli O103:H2 str.
12009]
Length = 295
Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKSPQQQT 290
>gi|78064832|ref|YP_367601.1| flagellar motor protein MotA [Burkholderia sp. 383]
gi|77965577|gb|ABB06957.1| Flagellar motor component-like protein [Burkholderia sp. 383]
Length = 286
Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats.
Identities = 106/285 (37%), Positives = 170/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ LIQP EI+++ GAG+G F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALIQPVEILMIVGAGVGAFILGNGGKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILATLNGYAPAIAVEFGRKVLFSTERPSFSELEEHVRRVKA 285
>gi|193065493|ref|ZP_03046562.1| chemotaxis protein MotA [Escherichia coli E22]
gi|192926898|gb|EDV81523.1| chemotaxis protein MotA [Escherichia coli E22]
Length = 295
Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 170/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSVETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|261749888|ref|ZP_05993597.1| flagellar motor protein MotA [Brucella suis bv. 5 str. 513]
gi|261739641|gb|EEY27567.1| flagellar motor protein MotA [Brucella suis bv. 5 str. 513]
Length = 296
Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++ QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVAEQETMASVPTQQAA 296
>gi|170703864|ref|ZP_02894554.1| flagellar motor component-like protein [Burkholderia ambifaria
IOP40-10]
gi|172059244|ref|YP_001806896.1| flagellar motor protein MotA [Burkholderia ambifaria MC40-6]
gi|170131225|gb|EDS99862.1| flagellar motor component-like protein [Burkholderia ambifaria
IOP40-10]
gi|171991761|gb|ACB62680.1| flagellar motor protein MotA [Burkholderia ambifaria MC40-6]
Length = 286
Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats.
Identities = 105/285 (36%), Positives = 170/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMITGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFTELEEHVRRVKA 285
>gi|107024397|ref|YP_622724.1| flagellar motor protein MotA [Burkholderia cenocepacia AU 1054]
gi|116688277|ref|YP_833900.1| flagellar motor protein MotA [Burkholderia cenocepacia HI2424]
gi|170731590|ref|YP_001763537.1| flagellar motor protein MotA [Burkholderia cenocepacia MC0-3]
gi|254246759|ref|ZP_04940080.1| hypothetical protein BCPG_01519 [Burkholderia cenocepacia PC184]
gi|105894586|gb|ABF77751.1| flagellar motor component-like protein [Burkholderia cenocepacia AU
1054]
gi|116646366|gb|ABK07007.1| flagellar motor component-like protein [Burkholderia cenocepacia
HI2424]
gi|124871535|gb|EAY63251.1| hypothetical protein BCPG_01519 [Burkholderia cenocepacia PC184]
gi|169814832|gb|ACA89415.1| flagellar motor protein MotA [Burkholderia cenocepacia MC0-3]
Length = 286
Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats.
Identities = 106/285 (37%), Positives = 169/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ LIQP EI+++ GAG+G F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALIQPVEILMIVGAGVGAFILGNGGKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILATLNGYAPAIAVEFGRKVLFSTERPSFSELEEHVRRVKA 285
>gi|16129842|ref|NP_416404.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. MG1655]
gi|89108730|ref|AP_002510.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. W3110]
gi|157161362|ref|YP_001458680.1| flagellar motor protein MotA [Escherichia coli HS]
gi|170019765|ref|YP_001724719.1| flagellar motor protein MotA [Escherichia coli ATCC 8739]
gi|170081545|ref|YP_001730865.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. DH10B]
gi|188495499|ref|ZP_03002769.1| chemotaxis protein MotA [Escherichia coli 53638]
gi|193069861|ref|ZP_03050810.1| chemotaxis protein MotA [Escherichia coli E110019]
gi|218554478|ref|YP_002387391.1| flagellar motor protein MotA [Escherichia coli IAI1]
gi|218695456|ref|YP_002403123.1| flagellar motor protein MotA [Escherichia coli 55989]
gi|238901105|ref|YP_002926901.1| proton conductor component of flagella motor [Escherichia coli
BW2952]
gi|253773153|ref|YP_003035984.1| flagellar motor protein MotA [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161950|ref|YP_003045058.1| flagellar motor protein MotA [Escherichia coli B str. REL606]
gi|256017906|ref|ZP_05431771.1| flagellar motor protein MotA [Shigella sp. D9]
gi|293446277|ref|ZP_06662699.1| chemotaxis protein motA [Escherichia coli B088]
gi|300819875|ref|ZP_07100060.1| flagellar motor protein MotA [Escherichia coli MS 107-1]
gi|300928924|ref|ZP_07144428.1| flagellar motor protein MotA [Escherichia coli MS 187-1]
gi|300951514|ref|ZP_07165349.1| flagellar motor protein MotA [Escherichia coli MS 116-1]
gi|300956596|ref|ZP_07168875.1| flagellar motor protein MotA [Escherichia coli MS 175-1]
gi|301645592|ref|ZP_07245521.1| flagellar motor protein MotA [Escherichia coli MS 146-1]
gi|307138555|ref|ZP_07497911.1| flagellar motor protein MotA [Escherichia coli H736]
gi|312969934|ref|ZP_07784117.1| chemotaxis protein motA [Escherichia coli 1827-70]
gi|331642508|ref|ZP_08343643.1| chemotaxis protein MotA [Escherichia coli H736]
gi|331677775|ref|ZP_08378450.1| chemotaxis protein MotA [Escherichia coli H591]
gi|332278937|ref|ZP_08391350.1| proton conductor component of flagella motor [Shigella sp. D9]
gi|127249|sp|P09348|MOTA_ECOLI RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|146882|gb|AAA24177.1| chemotaxis protein MotA [Escherichia coli]
gi|1736549|dbj|BAA15711.1| proton conductor component of flagella motor [Escherichia coli str.
K12 substr. W3110]
gi|1788199|gb|AAC74960.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. MG1655]
gi|157067042|gb|ABV06297.1| chemotaxis protein MotA [Escherichia coli HS]
gi|169754693|gb|ACA77392.1| proton conductor component of motor [Escherichia coli ATCC 8739]
gi|169889380|gb|ACB03087.1| proton conductor component of flagella motor [Escherichia coli str.
K-12 substr. DH10B]
gi|188490698|gb|EDU65801.1| chemotaxis protein MotA [Escherichia coli 53638]
gi|192956761|gb|EDV87215.1| chemotaxis protein MotA [Escherichia coli E110019]
gi|218352188|emb|CAU97929.1| proton conductor component of flagella motor [Escherichia coli
55989]
gi|218361246|emb|CAQ98830.1| proton conductor component of flagella motor [Escherichia coli
IAI1]
gi|238863327|gb|ACR65325.1| proton conductor component of flagella motor [Escherichia coli
BW2952]
gi|242377611|emb|CAQ32367.1| MotA protein, proton conductor component of motor; no effect on
switching, subunit of Flagellar Motor Complex and
Flagellum [Escherichia coli BL21(DE3)]
gi|253324197|gb|ACT28799.1| Flagellar motor component-like protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973851|gb|ACT39522.1| flagellar motor protein MotA [Escherichia coli B str. REL606]
gi|253978045|gb|ACT43715.1| flagellar motor protein MotA [Escherichia coli BL21(DE3)]
gi|260448987|gb|ACX39409.1| flagellar motor protein MotA [Escherichia coli DH1]
gi|291323107|gb|EFE62535.1| chemotaxis protein motA [Escherichia coli B088]
gi|300316578|gb|EFJ66362.1| flagellar motor protein MotA [Escherichia coli MS 175-1]
gi|300449264|gb|EFK12884.1| flagellar motor protein MotA [Escherichia coli MS 116-1]
gi|300463078|gb|EFK26571.1| flagellar motor protein MotA [Escherichia coli MS 187-1]
gi|300527572|gb|EFK48634.1| flagellar motor protein MotA [Escherichia coli MS 107-1]
gi|301076124|gb|EFK90930.1| flagellar motor protein MotA [Escherichia coli MS 146-1]
gi|309702113|emb|CBJ01428.1| chemotaxis protein MotA (motility protein A) [Escherichia coli ETEC
H10407]
gi|310338219|gb|EFQ03308.1| chemotaxis protein motA [Escherichia coli 1827-70]
gi|315136533|dbj|BAJ43692.1| flagellar motor protein MotA [Escherichia coli DH1]
gi|315617884|gb|EFU98482.1| chemotaxis protein motA [Escherichia coli 3431]
gi|323937149|gb|EGB33429.1| chemotaxis protein MotA [Escherichia coli E1520]
gi|323940441|gb|EGB36632.1| chemotaxis protein MotA [Escherichia coli E482]
gi|323948224|gb|EGB44212.1| chemotaxis protein MotA [Escherichia coli H120]
gi|323961945|gb|EGB57544.1| chemotaxis protein MotA [Escherichia coli H489]
gi|331039306|gb|EGI11526.1| chemotaxis protein MotA [Escherichia coli H736]
gi|331074235|gb|EGI45555.1| chemotaxis protein MotA [Escherichia coli H591]
gi|332089625|gb|EGI94727.1| chemotaxis protein motA [Shigella boydii 5216-82]
gi|332101289|gb|EGJ04635.1| proton conductor component of flagella motor [Shigella sp. D9]
Length = 295
Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats.
Identities = 102/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|260466627|ref|ZP_05812815.1| flagellar motor protein MotA [Mesorhizobium opportunistum WSM2075]
gi|259029633|gb|EEW30921.1| flagellar motor protein MotA [Mesorhizobium opportunistum WSM2075]
Length = 291
Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats.
Identities = 151/290 (52%), Positives = 212/290 (73%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL +T+ C++GGF AMGG+ ++L+QP+E V++ GA LG F++ANP+K +KD+G
Sbjct: 1 MGILIGLVVTLGCVLGGFMAMGGHLHVLVQPWEAVVICGAALGTFLVANPMKTVKDTGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+LE F + Y + L +L+ LM L+ SR+E E HID+P S IF + PTVL+N+
Sbjct: 61 ILEAFKQAVPKEQDYLETLGVLHSLMRELRSKSRSEVEAHIDNPEESAIFQAFPTVLKNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICDY R+II+GNARS+EIE LMDEEI I +K+K YHA+ +G+ LPA+GIV A
Sbjct: 121 DLMAFICDYCRIIIIGNARSHEIEALMDEEIQTIKSDKMKAYHALVAVGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG L QSP+ILG IG +L GT LGI LSY++ P+ ++IK+ R K++RLYII
Sbjct: 181 VLGVVKAMGALDQSPEILGGLIGAALVGTFLGIFLSYAVVGPVATKIKTVREKKNRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGA+PQVAIE+GRK + ERP+I+ V Q + +K +
Sbjct: 241 VKQTLLAYMNGALPQVAIEFGRKTISSYERPTIDAVEQSTMNTGAAEKKA 290
>gi|218705390|ref|YP_002412909.1| flagellar motor protein MotA [Escherichia coli UMN026]
gi|293405382|ref|ZP_06649374.1| chemotaxis protein motA [Escherichia coli FVEC1412]
gi|298381026|ref|ZP_06990625.1| chemotaxis protein MotA [Escherichia coli FVEC1302]
gi|300899143|ref|ZP_07117424.1| flagellar motor protein MotA [Escherichia coli MS 198-1]
gi|218432487|emb|CAR13380.1| proton conductor component of flagella motor [Escherichia coli
UMN026]
gi|291427590|gb|EFF00617.1| chemotaxis protein motA [Escherichia coli FVEC1412]
gi|298278468|gb|EFI19982.1| chemotaxis protein MotA [Escherichia coli FVEC1302]
gi|300357233|gb|EFJ73103.1| flagellar motor protein MotA [Escherichia coli MS 198-1]
Length = 295
Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|218699540|ref|YP_002407169.1| flagellar motor protein MotA [Escherichia coli IAI39]
gi|218369526|emb|CAR17295.1| proton conductor component of flagella motor [Escherichia coli
IAI39]
Length = 295
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 102/290 (35%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGAFYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|324013536|gb|EGB82755.1| flagellar motor protein MotA [Escherichia coli MS 60-1]
Length = 295
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 104/290 (35%), Positives = 170/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GGF+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGFFLTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRTKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|261216768|ref|ZP_05931049.1| flagellar motor protein MotA [Brucella ceti M13/05/1]
gi|261319635|ref|ZP_05958832.1| flagellar motor protein MotA [Brucella ceti M644/93/1]
gi|260921857|gb|EEX88425.1| flagellar motor protein MotA [Brucella ceti M13/05/1]
gi|261292325|gb|EEX95821.1| flagellar motor protein MotA [Brucella ceti M644/93/1]
Length = 296
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K + LYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNCLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|91211114|ref|YP_541100.1| flagellar motor protein MotA [Escherichia coli UTI89]
gi|117624040|ref|YP_852953.1| flagellar motor protein MotA [Escherichia coli APEC O1]
gi|215487101|ref|YP_002329532.1| flagellar motor protein MotA [Escherichia coli O127:H6 str.
E2348/69]
gi|218558753|ref|YP_002391666.1| flagellar motor protein MotA [Escherichia coli S88]
gi|218689886|ref|YP_002398098.1| flagellar motor protein MotA [Escherichia coli ED1a]
gi|227885681|ref|ZP_04003486.1| flagellar motor protein MotA [Escherichia coli 83972]
gi|237705848|ref|ZP_04536329.1| flagellar motor protein MotA [Escherichia sp. 3_2_53FAA]
gi|300935868|ref|ZP_07150826.1| flagellar motor protein MotA [Escherichia coli MS 21-1]
gi|301050753|ref|ZP_07197611.1| flagellar motor protein MotA [Escherichia coli MS 185-1]
gi|306814280|ref|ZP_07448446.1| flagellar motor protein MotA [Escherichia coli NC101]
gi|312967093|ref|ZP_07781311.1| chemotaxis protein motA [Escherichia coli 2362-75]
gi|331647485|ref|ZP_08348577.1| chemotaxis protein MotA [Escherichia coli M605]
gi|331657938|ref|ZP_08358900.1| chemotaxis protein MotA [Escherichia coli TA206]
gi|331683397|ref|ZP_08383998.1| chemotaxis protein MotA [Escherichia coli H299]
gi|91072688|gb|ABE07569.1| chemotaxis MotA protein [Escherichia coli UTI89]
gi|115513164|gb|ABJ01239.1| flagellar motor protein MotA [Escherichia coli APEC O1]
gi|215265173|emb|CAS09561.1| proton conductor component MotA of flagella motor [Escherichia coli
O127:H6 str. E2348/69]
gi|218365522|emb|CAR03249.1| proton conductor component of flagella motor [Escherichia coli S88]
gi|218427450|emb|CAR08347.2| proton conductor component of flagella motor [Escherichia coli
ED1a]
gi|222033637|emb|CAP76378.1| chemotaxis protein motA [Escherichia coli LF82]
gi|226900605|gb|EEH86864.1| flagellar motor protein MotA [Escherichia sp. 3_2_53FAA]
gi|227837254|gb|EEJ47720.1| flagellar motor protein MotA [Escherichia coli 83972]
gi|281178958|dbj|BAI55288.1| proton conductor component of motor [Escherichia coli SE15]
gi|294491110|gb|ADE89866.1| chemotaxis protein MotA [Escherichia coli IHE3034]
gi|300297570|gb|EFJ53955.1| flagellar motor protein MotA [Escherichia coli MS 185-1]
gi|300458980|gb|EFK22473.1| flagellar motor protein MotA [Escherichia coli MS 21-1]
gi|305852439|gb|EFM52890.1| flagellar motor protein MotA [Escherichia coli NC101]
gi|307553907|gb|ADN46682.1| proton conductor component of motor [Escherichia coli ABU 83972]
gi|307626627|gb|ADN70931.1| flagellar motor protein MotA [Escherichia coli UM146]
gi|312288557|gb|EFR16459.1| chemotaxis protein motA [Escherichia coli 2362-75]
gi|312946488|gb|ADR27315.1| flagellar motor protein MotA [Escherichia coli O83:H1 str. NRG
857C]
gi|315286596|gb|EFU46029.1| flagellar motor protein MotA [Escherichia coli MS 110-3]
gi|320194395|gb|EFW69026.1| Flagellar motor rotation protein MotA [Escherichia coli WV_060327]
gi|323186772|gb|EFZ72092.1| chemotaxis protein motA [Escherichia coli RN587/1]
gi|323952391|gb|EGB48264.1| chemotaxis protein MotA [Escherichia coli H252]
gi|323956292|gb|EGB52035.1| chemotaxis protein MotA [Escherichia coli H263]
gi|324007254|gb|EGB76473.1| flagellar motor protein MotA [Escherichia coli MS 57-2]
gi|330911700|gb|EGH40210.1| flagellar motor rotation protein MotA [Escherichia coli AA86]
gi|331043209|gb|EGI15347.1| chemotaxis protein MotA [Escherichia coli M605]
gi|331056186|gb|EGI28195.1| chemotaxis protein MotA [Escherichia coli TA206]
gi|331079612|gb|EGI50809.1| chemotaxis protein MotA [Escherichia coli H299]
Length = 295
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|291085222|ref|ZP_06352452.2| chemotaxis MotA protein [Citrobacter youngae ATCC 29220]
gi|291072390|gb|EFE10499.1| chemotaxis MotA protein [Citrobacter youngae ATCC 29220]
Length = 301
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 101/286 (35%), Positives = 163/286 (56%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + ++
Sbjct: 8 LILLGYLVVIGTVFGGYMMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKAI 67
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 68 PMLFRRSKYTKAMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAV 127
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A+
Sbjct: 128 MLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAV 187
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+ + + LG+ I ++ GT LGI+L+Y +PL S ++ + ++ V
Sbjct: 188 MGVVHALASADRPAAELGSLIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCV 247
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
K L++ +NG P +A+E+GRK L SERPS + + V +
Sbjct: 248 KITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPA 293
>gi|265993414|ref|ZP_06105971.1| flagellar motor protein MotA [Brucella melitensis bv. 3 str. Ether]
gi|262764284|gb|EEZ10316.1| flagellar motor protein MotA [Brucella melitensis bv. 3 str. Ether]
Length = 296
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 154/290 (53%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE L ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETLASVPTQQAA 296
>gi|110642006|ref|YP_669736.1| flagellar motor protein MotA [Escherichia coli 536]
gi|191173025|ref|ZP_03034559.1| chemotaxis protein MotA [Escherichia coli F11]
gi|300982220|ref|ZP_07175932.1| flagellar motor protein MotA [Escherichia coli MS 200-1]
gi|110343598|gb|ABG69835.1| chemotaxis MotA protein [Escherichia coli 536]
gi|190906736|gb|EDV66341.1| chemotaxis protein MotA [Escherichia coli F11]
gi|300307290|gb|EFJ61810.1| flagellar motor protein MotA [Escherichia coli MS 200-1]
Length = 295
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRTKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|167587858|ref|ZP_02380246.1| flagellar motor protein MotA [Burkholderia ubonensis Bu]
Length = 286
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 107/285 (37%), Positives = 170/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TIL + GG+ GG+ LIQP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTILSVFGGYALAGGHLGALIQPIEILMIVGAGVGAFILGNGMKTIKATLQV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYNKDVYMELMGLLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|170769361|ref|ZP_02903814.1| chemotaxis protein MotA [Escherichia albertii TW07627]
gi|170121685|gb|EDS90616.1| chemotaxis protein MotA [Escherichia albertii TW07627]
Length = 295
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 102/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMTKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGMLIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|206558532|ref|YP_002229292.1| flagellar motor protein MotA [Burkholderia cenocepacia J2315]
gi|198034569|emb|CAR50434.1| chemotaxis protein MotA [Burkholderia cenocepacia J2315]
Length = 286
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 107/285 (37%), Positives = 171/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ LIQP EI+++AGAG+G F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALIQPVEILMIAGAGVGAFILGNGGKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPQKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILATLNGYAPAIAVEFGRKVLFSTERPSFSELEEHVRRVKA 285
>gi|15802302|ref|NP_288327.1| flagellar motor protein MotA [Escherichia coli O157:H7 EDL933]
gi|15831854|ref|NP_310627.1| flagellar motor protein MotA [Escherichia coli O157:H7 str. Sakai]
gi|168757930|ref|ZP_02782937.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4401]
gi|168762312|ref|ZP_02787319.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4501]
gi|168770877|ref|ZP_02795884.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4486]
gi|168776559|ref|ZP_02801566.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4196]
gi|168783194|ref|ZP_02808201.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4076]
gi|168789759|ref|ZP_02814766.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC869]
gi|168801870|ref|ZP_02826877.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC508]
gi|195939594|ref|ZP_03084976.1| flagellar motor protein MotA [Escherichia coli O157:H7 str. EC4024]
gi|208810209|ref|ZP_03252085.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4206]
gi|208816669|ref|ZP_03257789.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4045]
gi|208819593|ref|ZP_03259913.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4042]
gi|209396503|ref|YP_002270974.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4115]
gi|217328719|ref|ZP_03444800.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. TW14588]
gi|254793514|ref|YP_003078351.1| flagellar motor protein MotA [Escherichia coli O157:H7 str.
TW14359]
gi|261227609|ref|ZP_05941890.1| proton conductor component of flagella motor [Escherichia coli
O157:H7 str. FRIK2000]
gi|261258225|ref|ZP_05950758.1| proton conductor component of flagella motor [Escherichia coli
O157:H7 str. FRIK966]
gi|291283072|ref|YP_003499890.1| Chemotaxis protein MotA [Escherichia coli O55:H7 str. CB9615]
gi|12515954|gb|AAG56880.1|AE005411_4 proton conductor component of motor; no effect on switching
[Escherichia coli O157:H7 str. EDL933]
gi|13362068|dbj|BAB36023.1| proton conductor component of motor [Escherichia coli O157:H7 str.
Sakai]
gi|187768064|gb|EDU31908.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4196]
gi|188999438|gb|EDU68424.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4076]
gi|189355203|gb|EDU73622.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4401]
gi|189360283|gb|EDU78702.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4486]
gi|189367341|gb|EDU85757.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4501]
gi|189370701|gb|EDU89117.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC869]
gi|189376043|gb|EDU94459.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC508]
gi|208724725|gb|EDZ74432.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4206]
gi|208731012|gb|EDZ79701.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4045]
gi|208739716|gb|EDZ87398.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4042]
gi|209157903|gb|ACI35336.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. EC4115]
gi|209767208|gb|ACI81916.1| proton conductor component of motor [Escherichia coli]
gi|209767210|gb|ACI81917.1| proton conductor component of motor [Escherichia coli]
gi|209767212|gb|ACI81918.1| proton conductor component of motor [Escherichia coli]
gi|209767214|gb|ACI81919.1| proton conductor component of motor [Escherichia coli]
gi|209767216|gb|ACI81920.1| proton conductor component of motor [Escherichia coli]
gi|217318066|gb|EEC26493.1| chemotaxis protein MotA [Escherichia coli O157:H7 str. TW14588]
gi|254592914|gb|ACT72275.1| proton conductor component of flagella motor [Escherichia coli
O157:H7 str. TW14359]
gi|290762945|gb|ADD56906.1| Chemotaxis protein MotA [Escherichia coli O55:H7 str. CB9615]
gi|320188590|gb|EFW63252.1| Flagellar motor rotation protein MotA [Escherichia coli O157:H7
str. EC1212]
gi|320641744|gb|EFX11132.1| flagellar motor protein MotA [Escherichia coli O157:H7 str. G5101]
gi|320647104|gb|EFX15937.1| flagellar motor protein MotA [Escherichia coli O157:H- str. 493-89]
gi|320652387|gb|EFX20685.1| flagellar motor protein MotA [Escherichia coli O157:H- str. H 2687]
gi|320657988|gb|EFX25750.1| flagellar motor protein MotA [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320658561|gb|EFX26255.1| flagellar motor protein MotA [Escherichia coli O55:H7 str. USDA
5905]
gi|320668459|gb|EFX35286.1| flagellar motor protein MotA [Escherichia coli O157:H7 str. LSU-61]
gi|326342268|gb|EGD66049.1| Flagellar motor rotation protein MotA [Escherichia coli O157:H7
str. 1044]
gi|326343819|gb|EGD67581.1| Flagellar motor rotation protein MotA [Escherichia coli O157:H7
str. 1125]
Length = 295
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 102/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P ++ ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRIIADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|315296508|gb|EFU55805.1| flagellar motor protein MotA [Escherichia coli MS 16-3]
Length = 295
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILFGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|307131628|ref|YP_003883644.1| flagellar motor rotation protein motA [Dickeya dadantii 3937]
gi|306529157|gb|ADM99087.1| Flagellar motor rotation protein motA [Dickeya dadantii 3937]
Length = 295
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 93/290 (32%), Positives = 166/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TI I+GG+ +GG L QP E++I+ GA G F++ N K IK + +
Sbjct: 1 MLVILGYLVTIGSILGGYLIVGGELGALYQPSELLIIGGAAAGAFIVGNNGKAIKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + Y D++ +L+ LM ++ E ID+P S IF++ P +L ++
Sbjct: 61 LPTLLKGSQYTKAVYMDLMAVLFRLMAKSRQQGMLSLEFDIDNPKESEIFSNYPRILSDD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 YIVEFVTDYLRLMVSGNMNAFEIETLMDEEIETVEHEVEVPATSLNLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHSLAFVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLASLLRQKNSEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L + RPS + + + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTVRPSFTEMEEHIRNVKAPAQQA 290
>gi|261215634|ref|ZP_05929915.1| flagellar motor protein MotA [Brucella abortus bv. 3 str. Tulya]
gi|260917241|gb|EEX84102.1| flagellar motor protein MotA [Brucella abortus bv. 3 str. Tulya]
Length = 296
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 152/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEI+ LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIDALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|260544319|ref|ZP_05820140.1| flagellar motor protein [Brucella abortus NCTC 8038]
gi|260564281|ref|ZP_05834766.1| flagellar motor protein [Brucella melitensis bv. 1 str. 16M]
gi|260757051|ref|ZP_05869399.1| flagellar motor protein MotA [Brucella abortus bv. 6 str. 870]
gi|260759578|ref|ZP_05871926.1| flagellar motor protein MotA [Brucella abortus bv. 4 str. 292]
gi|260762822|ref|ZP_05875154.1| flagellar motor protein MotA [Brucella abortus bv. 2 str. 86/8/59]
gi|260882861|ref|ZP_05894475.1| flagellar motor protein MotA [Brucella abortus bv. 9 str. C68]
gi|265989487|ref|ZP_06102044.1| flagellar motor protein MotA [Brucella melitensis bv. 1 str. Rev.1]
gi|265999227|ref|ZP_05465419.2| flagellar motor protein [Brucella melitensis bv. 2 str. 63/9]
gi|260097590|gb|EEW81464.1| flagellar motor protein [Brucella abortus NCTC 8038]
gi|260151924|gb|EEW87017.1| flagellar motor protein [Brucella melitensis bv. 1 str. 16M]
gi|260669896|gb|EEX56836.1| flagellar motor protein MotA [Brucella abortus bv. 4 str. 292]
gi|260673243|gb|EEX60064.1| flagellar motor protein MotA [Brucella abortus bv. 2 str. 86/8/59]
gi|260677159|gb|EEX63980.1| flagellar motor protein MotA [Brucella abortus bv. 6 str. 870]
gi|260872389|gb|EEX79458.1| flagellar motor protein MotA [Brucella abortus bv. 9 str. C68]
gi|263000156|gb|EEZ12846.1| flagellar motor protein MotA [Brucella melitensis bv. 1 str. Rev.1]
gi|263092724|gb|EEZ16933.1| flagellar motor protein [Brucella melitensis bv. 2 str. 63/9]
gi|326410313|gb|ADZ67377.1| flagellar motor protein MotA [Brucella melitensis M28]
gi|326553606|gb|ADZ88245.1| flagellar motor protein MotA [Brucella melitensis M5-90]
Length = 296
Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats.
Identities = 153/290 (52%), Positives = 207/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLSVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|265985675|ref|ZP_06098410.1| flagellar motor protein MotA [Brucella sp. 83/13]
gi|264664267|gb|EEZ34528.1| flagellar motor protein MotA [Brucella sp. 83/13]
Length = 296
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 153/290 (52%), Positives = 208/290 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 7 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 66
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 67 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKP+ A+ + E+LPA+GIV A
Sbjct: 127 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPHQAMITISEALPALGIVAA 186
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ ++IKSTR K +RLYI+
Sbjct: 187 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVIGPIANKIKSTREKNNRLYIV 246
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQ+A+EYGRK + ERP+I++V QE + ++A+
Sbjct: 247 VKQTLLAYMNGSLPQIAVEYGRKTISAYERPTIDVVEQETMASVPTQQAA 296
>gi|53720919|ref|YP_109905.1| flagellar motor protein MotA [Burkholderia pseudomallei K96243]
gi|53724324|ref|YP_104372.1| flagellar motor protein MotA [Burkholderia mallei ATCC 23344]
gi|67640464|ref|ZP_00439269.1| chemotaxis protein MotA [Burkholderia mallei GB8 horse 4]
gi|76810929|ref|YP_331497.1| flagellar motor protein MotA [Burkholderia pseudomallei 1710b]
gi|121600572|ref|YP_994716.1| flagellar motor protein MotA [Burkholderia mallei SAVP1]
gi|124383824|ref|YP_001027661.1| flagellar motor protein MotA [Burkholderia mallei NCTC 10229]
gi|126441486|ref|YP_001060852.1| flagellar motor protein MotA [Burkholderia pseudomallei 668]
gi|126448569|ref|YP_001082632.1| flagellar motor protein MotA [Burkholderia mallei NCTC 10247]
gi|126451764|ref|YP_001068159.1| flagellar motor protein MotA [Burkholderia pseudomallei 1106a]
gi|134281489|ref|ZP_01768197.1| chemotaxis protein MotA [Burkholderia pseudomallei 305]
gi|167000406|ref|ZP_02266220.1| chemotaxis MotA protein [Burkholderia mallei PRL-20]
gi|167721694|ref|ZP_02404930.1| flagellar motor protein MotA [Burkholderia pseudomallei DM98]
gi|167740672|ref|ZP_02413446.1| flagellar motor protein MotA [Burkholderia pseudomallei 14]
gi|167817883|ref|ZP_02449563.1| flagellar motor protein MotA [Burkholderia pseudomallei 91]
gi|167826261|ref|ZP_02457732.1| flagellar motor protein MotA [Burkholderia pseudomallei 9]
gi|167847769|ref|ZP_02473277.1| flagellar motor protein MotA [Burkholderia pseudomallei B7210]
gi|167896357|ref|ZP_02483759.1| flagellar motor protein MotA [Burkholderia pseudomallei 7894]
gi|167904731|ref|ZP_02491936.1| flagellar motor protein MotA [Burkholderia pseudomallei NCTC 13177]
gi|167913011|ref|ZP_02500102.1| flagellar motor protein MotA [Burkholderia pseudomallei 112]
gi|167920948|ref|ZP_02508039.1| flagellar motor protein MotA [Burkholderia pseudomallei BCC215]
gi|217424036|ref|ZP_03455536.1| chemotaxis protein MotA [Burkholderia pseudomallei 576]
gi|237814249|ref|YP_002898700.1| chemotaxis protein MotA [Burkholderia pseudomallei MSHR346]
gi|242317302|ref|ZP_04816318.1| chemotaxis protein MotA [Burkholderia pseudomallei 1106b]
gi|254174899|ref|ZP_04881560.1| chemotaxis MotA protein [Burkholderia mallei ATCC 10399]
gi|254183891|ref|ZP_04890482.1| chemotaxis protein MotA [Burkholderia pseudomallei 1655]
gi|254186367|ref|ZP_04892884.1| chemotaxis protein MotA [Burkholderia pseudomallei Pasteur 52237]
gi|254194544|ref|ZP_04900975.1| chemotaxis protein MotA [Burkholderia pseudomallei S13]
gi|254201445|ref|ZP_04907809.1| chemotaxis MotA protein [Burkholderia mallei FMH]
gi|254206787|ref|ZP_04913138.1| chemotaxis MotA protein [Burkholderia mallei JHU]
gi|254260914|ref|ZP_04951968.1| chemotaxis protein MotA [Burkholderia pseudomallei 1710a]
gi|254357190|ref|ZP_04973464.1| chemotaxis MotA protein [Burkholderia mallei 2002721280]
gi|52211333|emb|CAH37322.1| chemotaxis protein MotA [Burkholderia pseudomallei K96243]
gi|52427747|gb|AAU48340.1| chemotaxis MotA protein [Burkholderia mallei ATCC 23344]
gi|76580382|gb|ABA49857.1| chemotaxis MotA protein [Burkholderia pseudomallei 1710b]
gi|121229382|gb|ABM51900.1| chemotaxis MotA protein [Burkholderia mallei SAVP1]
gi|124291844|gb|ABN01113.1| chemotaxis protein MotA [Burkholderia mallei NCTC 10229]
gi|126220979|gb|ABN84485.1| chemotaxis protein MotA [Burkholderia pseudomallei 668]
gi|126225406|gb|ABN88946.1| chemotaxis protein MotA [Burkholderia pseudomallei 1106a]
gi|126241439|gb|ABO04532.1| chemotaxis protein MotA [Burkholderia mallei NCTC 10247]
gi|134247156|gb|EBA47242.1| chemotaxis protein MotA [Burkholderia pseudomallei 305]
gi|147747339|gb|EDK54415.1| chemotaxis MotA protein [Burkholderia mallei FMH]
gi|147752329|gb|EDK59395.1| chemotaxis MotA protein [Burkholderia mallei JHU]
gi|148026254|gb|EDK84339.1| chemotaxis MotA protein [Burkholderia mallei 2002721280]
gi|157934052|gb|EDO89722.1| chemotaxis protein MotA [Burkholderia pseudomallei Pasteur 52237]
gi|160695944|gb|EDP85914.1| chemotaxis MotA protein [Burkholderia mallei ATCC 10399]
gi|169651294|gb|EDS83987.1| chemotaxis protein MotA [Burkholderia pseudomallei S13]
gi|184214423|gb|EDU11466.1| chemotaxis protein MotA [Burkholderia pseudomallei 1655]
gi|217393099|gb|EEC33121.1| chemotaxis protein MotA [Burkholderia pseudomallei 576]
gi|237504138|gb|ACQ96456.1| chemotaxis protein MotA [Burkholderia pseudomallei MSHR346]
gi|238521180|gb|EEP84633.1| chemotaxis protein MotA [Burkholderia mallei GB8 horse 4]
gi|242140541|gb|EES26943.1| chemotaxis protein MotA [Burkholderia pseudomallei 1106b]
gi|243063601|gb|EES45787.1| chemotaxis MotA protein [Burkholderia mallei PRL-20]
gi|254219603|gb|EET08987.1| chemotaxis protein MotA [Burkholderia pseudomallei 1710a]
Length = 286
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 104/285 (36%), Positives = 170/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALVQPVEILMIVGAGVGAFIIGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYNKDIYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|194439071|ref|ZP_03071154.1| chemotaxis protein MotA [Escherichia coli 101-1]
gi|300822335|ref|ZP_07102476.1| flagellar motor protein MotA [Escherichia coli MS 119-7]
gi|301029342|ref|ZP_07192439.1| flagellar motor protein MotA [Escherichia coli MS 196-1]
gi|194422030|gb|EDX38034.1| chemotaxis protein MotA [Escherichia coli 101-1]
gi|299877768|gb|EFI85979.1| flagellar motor protein MotA [Escherichia coli MS 196-1]
gi|300525218|gb|EFK46287.1| flagellar motor protein MotA [Escherichia coli MS 119-7]
gi|323972600|gb|EGB67803.1| chemotaxis protein MotA [Escherichia coli TA007]
gi|332343617|gb|AEE56951.1| chemotaxis protein MotA [Escherichia coli UMNK88]
Length = 295
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHASEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|260855830|ref|YP_003229721.1| proton conductor component MotA [Escherichia coli O26:H11 str.
11368]
gi|257754479|dbj|BAI25981.1| proton conductor component MotA [Escherichia coli O26:H11 str.
11368]
Length = 295
Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats.
Identities = 103/288 (35%), Positives = 168/288 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
VK L++ +NG P +A+E+GRK L SERPS + + V + ++
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQ 288
>gi|186477723|ref|YP_001859193.1| flagellar motor protein MotA [Burkholderia phymatum STM815]
gi|184194182|gb|ACC72147.1| chemotaxis protein MotA [Burkholderia phymatum STM815]
Length = 286
Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats.
Identities = 103/285 (36%), Positives = 171/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++AGAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALMQPVEVLMIAGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPQKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEAPAHALMKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|295678084|ref|YP_003606608.1| flagellar motor protein MotA [Burkholderia sp. CCGE1002]
gi|295437927|gb|ADG17097.1| flagellar motor protein MotA [Burkholderia sp. CCGE1002]
Length = 286
Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats.
Identities = 102/285 (35%), Positives = 170/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP E++++AGAGLG F++ N +K I+ +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIAGAGLGAFILGNGMKTIRATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P A++ +G+++PA GIV A
Sbjct: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAQALAKVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADRPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|254250907|ref|ZP_04944225.1| Flagellar motor component [Burkholderia dolosa AUO158]
gi|124893516|gb|EAY67396.1| Flagellar motor component [Burkholderia dolosa AUO158]
Length = 286
Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats.
Identities = 107/285 (37%), Positives = 171/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ LIQP EI+++AGAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALIQPVEILMIAGAGVGAFILGNGMKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|115350222|ref|YP_772061.1| flagellar motor protein MotA [Burkholderia ambifaria AMMD]
gi|171322725|ref|ZP_02911472.1| flagellar motor protein MotA [Burkholderia ambifaria MEX-5]
gi|115280210|gb|ABI85727.1| flagellar motor component-like protein [Burkholderia ambifaria
AMMD]
gi|171091927|gb|EDT37394.1| flagellar motor protein MotA [Burkholderia ambifaria MEX-5]
Length = 286
Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats.
Identities = 105/285 (36%), Positives = 171/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK + +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMITGAGVGAFILGNGMKTIKATLLV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHTEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFTELEEHVRRVKA 285
>gi|121602234|ref|YP_989407.1| lateral flagellar motor protein MotA [Bartonella bacilliformis
KC583]
gi|120614411|gb|ABM45012.1| lateral flagellar motor protein MotA [Bartonella bacilliformis
KC583]
Length = 301
Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats.
Identities = 137/290 (47%), Positives = 202/290 (69%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S IIGL IT+ CI+GG+ AMGG+ +L+QP+E VI+ G+ +G F+++ P VIKD+ +
Sbjct: 11 LSVIIGLIITLGCILGGYVAMGGHLDVLMQPWEFVIIVGSAIGAFIVSTPFPVIKDTLKA 70
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
E Q + L LLY LM ++ SR+E E+HID+P ST+F P VL+++
Sbjct: 71 TTEALTDAVPKQKDFLATLGLLYTLMREMRSKSRSEMESHIDNPKESTLFQQYPLVLKDD 130
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I + KPY A+ +M ++LPA+GIV A
Sbjct: 131 SLTNFICDYCRLIVMGNTRPFEIEALMDEEIHTISSDSQKPYQAMQNMADALPALGIVAA 190
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++ P++LG IG +L GT GI SYS+ P+ ++IK+ R K+ R+YI+
Sbjct: 191 VLGVIKAMGAITEPPEVLGHLIGAALVGTFAGIFFSYSIFGPIATKIKAVRSKKTRIYIV 250
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGAIPQ+A+EYGRK + +RP+I++V Q + + +K +
Sbjct: 251 VKQTLLAYMNGAIPQIALEYGRKTISAKDRPTIDVVEQHAISGHSAEKKA 300
>gi|186473030|ref|YP_001860372.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
gi|184195362|gb|ACC73326.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
Length = 289
Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats.
Identities = 101/289 (34%), Positives = 163/289 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + + +IG F +GG+ L+QPFE++ + GA +G FV++NP+ V+K + +
Sbjct: 1 MFVAIGWLLVVGSVIGSFVGVGGHLPALVQPFELLCIFGAAIGAFVVSNPVSVLKKTIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F A ++ Y +++ LLY L+ +K E ++ P S +F VL+++
Sbjct: 61 LPGCFKGGAYSKEIYLELIALLYELLQKARKEGMMALEADVNAPEESALFQKYSHVLKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE++ E P +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSTGNVNVLEMQDLMDEELETHHAESSVPANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y P+ + + + + Y
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPVADLLNAKGRAEAKPYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A ++G P VA+E+GRKVL ++RPS + + V K A
Sbjct: 241 VKAVLLASLSGYAPPVAVEFGRKVLFTADRPSFQELDDAVRATKMPKSA 289
>gi|167564511|ref|ZP_02357427.1| flagellar motor protein MotA [Burkholderia oklahomensis EO147]
gi|167571660|ref|ZP_02364534.1| flagellar motor protein MotA [Burkholderia oklahomensis C6786]
Length = 286
Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats.
Identities = 104/285 (36%), Positives = 170/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALVQPVEILMIVGAGVGAFILGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPSLFKGSKYNKDIYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL+S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLSSLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFTELEEHVRRVKA 285
>gi|83719743|ref|YP_443679.1| flagellar motor protein MotA [Burkholderia thailandensis E264]
gi|167582719|ref|ZP_02375593.1| flagellar motor protein MotA [Burkholderia thailandensis TXDOH]
gi|167620833|ref|ZP_02389464.1| flagellar motor protein MotA [Burkholderia thailandensis Bt4]
gi|83653568|gb|ABC37631.1| chemotaxis MotA protein [Burkholderia thailandensis E264]
Length = 286
Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 104/285 (36%), Positives = 171/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALVQPVEILMITGAGVGAFILGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L ++
Sbjct: 61 LPTLFKGSKYNKDIYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL+S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLSSLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|24113275|ref|NP_707785.1| flagellar motor protein MotA [Shigella flexneri 2a str. 301]
gi|30063342|ref|NP_837513.1| flagellar motor protein MotA [Shigella flexneri 2a str. 2457T]
gi|74311760|ref|YP_310179.1| flagellar motor protein MotA [Shigella sonnei Ss046]
gi|110805870|ref|YP_689390.1| flagellar motor protein MotA [Shigella flexneri 5 str. 8401]
gi|24052279|gb|AAN43492.1| proton conductor component of motor [Shigella flexneri 2a str. 301]
gi|30041594|gb|AAP17322.1| proton conductor component of motor [Shigella flexneri 2a str.
2457T]
gi|73855237|gb|AAZ87944.1| proton conductor component of motor [Shigella sonnei Ss046]
gi|110615418|gb|ABF04085.1| flagellar motor protein [Shigella flexneri 5 str. 8401]
gi|281601337|gb|ADA74321.1| Proton conductor component of motor [Shigella flexneri 2002017]
gi|313650106|gb|EFS14519.1| chemotaxis protein motA [Shigella flexneri 2a str. 2457T]
gi|323165314|gb|EFZ51102.1| chemotaxis protein motA [Shigella sonnei 53G]
gi|332757195|gb|EGJ87532.1| chemotaxis protein motA [Shigella flexneri 2747-71]
gi|332757450|gb|EGJ87785.1| chemotaxis protein motA [Shigella flexneri K-671]
gi|332766621|gb|EGJ96825.1| motA protein, proton conductor component of motor no effect on
switching [Shigella flexneri 2930-71]
gi|333004151|gb|EGK23683.1| chemotaxis protein motA [Shigella flexneri K-272]
gi|333017628|gb|EGK36940.1| chemotaxis protein motA [Shigella flexneri K-304]
gi|333017761|gb|EGK37068.1| chemotaxis protein motA [Shigella flexneri K-227]
Length = 295
Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G + A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGGVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|323152619|gb|EFZ38895.1| chemotaxis protein motA [Escherichia coli EPECa14]
Length = 295
Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 103/288 (35%), Positives = 168/288 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLSTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
VK L++ +NG P +A+E+GRK L SERPS + + V + ++
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQ 288
>gi|78063637|ref|YP_373545.1| flagellar motor component-like [Burkholderia sp. 383]
gi|77971522|gb|ABB12901.1| Flagellar motor component-like protein [Burkholderia sp. 383]
Length = 289
Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats.
Identities = 102/289 (35%), Positives = 158/289 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ L+QPFE++ + GA LG FV++NP+ +K + +
Sbjct: 1 MFVAIGWIVVIGSVIGSFVGVGGHLPALLQPFELLCIFGAALGAFVVSNPVTTLKKTIKT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + Y +++ LLY L+ ++ E +D P S +F VLE++
Sbjct: 61 LPTCFKGGGYTKQQYVELIALLYELLQKARRDGMMALEADVDAPEQSPLFQKYSHVLEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEMQDLMDEELHTHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAVLGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRAAAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A M+G P VA+E+GRKVL ++RPS + + + V K A
Sbjct: 241 VKAVLLASMSGYAPPVAVEFGRKVLFTADRPSFKELDEAVRATKSPKAA 289
>gi|242238951|ref|YP_002987132.1| flagellar motor protein MotA [Dickeya dadantii Ech703]
gi|242131008|gb|ACS85310.1| flagellar motor protein MotA [Dickeya dadantii Ech703]
Length = 295
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 94/290 (32%), Positives = 167/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +TI I+GG+ +GG L QP E++I+ G+ +G F++ N K IK + +
Sbjct: 1 MLVILGYLVTIGSILGGYLIVGGELGALYQPSELLIIGGSAIGAFIVGNTGKGIKGTLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ +L+ LM ++ E ID+P S IF++ P +L +N
Sbjct: 61 LPTLFKGSKYTKAVYMDLMAVLFRLMAKSRQQGMLSLEFDIDNPKESEIFSTYPRILSDN 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE LMDEEI+ + +E P +++ MG+ LPA GIV A
Sbjct: 121 YVIEFVTDYLRLMVSGNMNAFEIETLMDEEIETVEHEIEVPATSLNLMGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ ++ + + LG I ++ GT LGI+L+Y +PL S ++ ++ ++
Sbjct: 181 VMGVVHSLAFVDRPAAELGMMIAHAMVGTFLGILLAYGFVSPLASLLRQKNSEKIKVLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L++ +NG PQ+A+E+GRK L + RPS + + + +
Sbjct: 241 IKVTLLSSLNGYAPQIAVEFGRKTLYSTVRPSFTEMEDHIRSVKAPPQQA 290
>gi|332756041|gb|EGJ86394.1| chemotaxis protein motA [Shigella flexneri 4343-70]
gi|333003362|gb|EGK22908.1| chemotaxis protein motA [Shigella flexneri K-218]
Length = 295
Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G + A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGGVHALGSADRPAAELGVLIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|260598379|ref|YP_003210950.1| flagellar motor protein MotA [Cronobacter turicensis z3032]
gi|260217556|emb|CBA31776.1| Chemotaxis protein motA [Cronobacter turicensis z3032]
Length = 285
Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats.
Identities = 100/278 (35%), Positives = 159/278 (57%)
Query: 11 ILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKAL 70
+ + GG+ GG L QP E++I+ GAG+G F++ N K IK + +L +F
Sbjct: 1 MGTVFGGYMMTGGELGALYQPAELIIIGGAGVGAFIVGNNGKAIKGTVKALPLLFRRSKY 60
Query: 71 GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
+ Y D++ LLY LM ++ E I++P S IFTS P +L +N + FI DY+
Sbjct: 61 TKSMYMDLMALLYRLMTKSRQQGMFSLERDIENPKESEIFTSYPRILADNTMLEFITDYL 120
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R+II GN ++EIE LMDEEI+ E P ++++ MG+SLPA GIV A++G++ A+ +
Sbjct: 121 RLIISGNMNTFEIEALMDEEIETHESEAEVPANSLALMGDSLPAFGIVAAVMGVVHALAS 180
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ LG I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +N
Sbjct: 181 ADRPAAELGALIAHAMVGTFLGILLAYGFVSPLATVLRQKSAETTKMMQCVKVTLLSSLN 240
Query: 251 GAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
G P +A+E+GRK L SERPS + + V +
Sbjct: 241 GYAPPIAVEFGRKTLYSSERPSFTELDEHVRAVKSPNQ 278
>gi|311105915|ref|YP_003978768.1| chemotaxis protein MotA [Achromobacter xylosoxidans A8]
gi|310760604|gb|ADP16053.1| chemotaxis protein MotA [Achromobacter xylosoxidans A8]
Length = 291
Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats.
Identities = 107/287 (37%), Positives = 168/287 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + + ++G F A+GG+ L QPFE+ ++ GA G F+ +N K + +
Sbjct: 1 MLIVIGFLVVAVSVVGSFIALGGHLGALYQPFELTLIFGAAFGAFLASNSKKSLMLVKAA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G+D Y +++ LLY+L+ ++ E+HI+DP +S IF+ P + ++
Sbjct: 61 LPDSLKSSRYGKDVYMELMALLYVLLNKARREGLMAIESHIEDPESSPIFSEYPRIAKDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P A+ M + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPVRALQQMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P ILG I ++ GT LGI+L+Y PL S+I + ++
Sbjct: 181 VLGVIKALAAVDQPPAILGDLISKAMVGTFLGILLAYGFVGPLASRIDRRSDEATKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+K L+A MNG PQ+A+E+GRKVL + RP+ + + V Q
Sbjct: 241 IKTTLLASMNGYPPQLAVEFGRKVLFSAVRPTFGELEEHVRQAKSTA 287
>gi|221202106|ref|ZP_03575141.1| chemotaxis protein MotA [Burkholderia multivorans CGD2M]
gi|221209086|ref|ZP_03582081.1| chemotaxis protein MotA [Burkholderia multivorans CGD2]
gi|221171081|gb|EEE03533.1| chemotaxis protein MotA [Burkholderia multivorans CGD2]
gi|221177900|gb|EEE10312.1| chemotaxis protein MotA [Burkholderia multivorans CGD2M]
Length = 286
Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats.
Identities = 107/285 (37%), Positives = 169/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++AGAGLG F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIAGAGLGAFILGNGTKTIKATVRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSPERPSFAELEEHVRRVKA 285
>gi|82702436|ref|YP_412002.1| chemotaxis (motility protein A) transmembrane [Nitrosospira
multiformis ATCC 25196]
gi|82410501|gb|ABB74610.1| probable chemotaxis (motility protein A) transmembrane
[Nitrosospira multiformis ATCC 25196]
Length = 286
Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats.
Identities = 98/285 (34%), Positives = 156/285 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I + + GGF GG+ L QP E++++ GA +G F + N K +K + S
Sbjct: 1 MLVIIGSLIVLGSVFGGFALTGGHLAALFQPVELLMIGGAAMGAFTLGNTKKALKATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y D++ LLY L+ ++K E +DDP S IF + P +L
Sbjct: 61 LPKVVQPPRYTKALYMDLMALLYDLLVKVRKEGLMSIEPDVDDPNESAIFANYPDILAEP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ DY+R+++ GN ++E+ENLMD EI+ E P H IS + +S+PA GIV A
Sbjct: 121 VALEFLTDYLRLMVAGNLNAFELENLMDNEIETHHQEGEIPVHCISRLADSMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M ++ P LG + +L GT LGI+L Y P+ S ++ + ++
Sbjct: 181 VMGVIHTMASVGLPPSELGVLVAQALVGTFLGILLGYGFVGPVASILEQRLNESTKILQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++ L+A +NG P +A+E+GRKVL +ERPS + V +
Sbjct: 241 IRVTLLASINGYTPALAVEFGRKVLYSTERPSFAELESHVRRAKD 285
>gi|238026966|ref|YP_002911197.1| flagellar motor component-like protein [Burkholderia glumae BGR1]
gi|237876160|gb|ACR28493.1| Flagellar motor component-like protein [Burkholderia glumae BGR1]
Length = 289
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 99/289 (34%), Positives = 155/289 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ LIQPFE++ + GA G FV++NP + + +
Sbjct: 1 MFVAIGWIVVIGSVIGSFVGVGGHLPALIQPFELLCIFGAAAGAFVVSNPRDTLVKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + Y +++ LLY ++ ++ E+ I++P +S +F VL ++
Sbjct: 61 LPSCFKSSGYTKTQYLELIALLYEVLQKARREGMLSLESDIENPASSALFQKYSHVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E AI M + LPA GIV A
Sbjct: 121 HLLDFIIDYLRMMSTGNVNPLEMQDLMDEELGTHHAEMSVAPSAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P LG I +L GT LGI+L+Y PL + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAELGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRSSAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A ++G P VA+E+GRKVL S+RPS + + + V K A
Sbjct: 241 VKAVLLASLSGYAPAVAVEFGRKVLFTSDRPSFQELDEAVRATKTVKAA 289
>gi|221214226|ref|ZP_03587198.1| chemotaxis protein MotA [Burkholderia multivorans CGD1]
gi|221165881|gb|EED98355.1| chemotaxis protein MotA [Burkholderia multivorans CGD1]
Length = 286
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 107/285 (37%), Positives = 169/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++AGAGLG F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIAGAGLGAFILGNGSKTIKATVRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSPERPSFAELEEHVRRVKA 285
>gi|307726279|ref|YP_003909492.1| flagellar motor component-like protein [Burkholderia sp. CCGE1003]
gi|307586804|gb|ADN60201.1| flagellar motor component-like protein [Burkholderia sp. CCGE1003]
Length = 294
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 158/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ LIQPFE++ + GA +G FV++NP +K + +
Sbjct: 1 MFVAIGWVLVIGSVIGSFVGVGGHLPALIQPFELLCIFGAAIGAFVVSNPTSTLKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P S IF P VL ++
Sbjct: 61 IPSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEADVFAPEESVIFQKYPHVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPLADLLNAKGRAEAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L+A ++G P +A+E+GRKVL ++RPS + + V K A+
Sbjct: 241 VKAVLLASLSGYAPPIAVEFGRKVLFTADRPSFQELDDAVRATKSPKPAA 290
>gi|325525469|gb|EGD03282.1| flagellar motor protein MotA [Burkholderia sp. TJI49]
Length = 286
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 106/285 (37%), Positives = 171/285 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++AGAG+G F++ N +K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIAGAGVGAFILGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPDKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHVEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|323174593|gb|EFZ60214.1| chemotaxis protein motA [Escherichia coli LT-68]
Length = 295
Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats.
Identities = 102/290 (35%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETNESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G + A+G+ + LG I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGGVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 290
>gi|161523342|ref|YP_001578354.1| flagellar motor protein MotA [Burkholderia multivorans ATCC 17616]
gi|189351885|ref|YP_001947513.1| flagellar motor protein MotA [Burkholderia multivorans ATCC 17616]
gi|160340771|gb|ABX13857.1| flagellar motor component-like protein [Burkholderia multivorans
ATCC 17616]
gi|189335907|dbj|BAG44977.1| chemotaxis MotA protein [Burkholderia multivorans ATCC 17616]
Length = 286
Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats.
Identities = 106/285 (37%), Positives = 169/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++AGAG+G F++ N K IK +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIAGAGIGAFILGNGSKTIKATVRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +D Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKGSKYTKDVYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSPERPSFAELEEHVRRVKA 285
>gi|319898629|ref|YP_004158722.1| Chemotaxis protein motA (Motility protein A) [Bartonella
clarridgeiae 73]
gi|319402593|emb|CBI76138.1| Chemotaxis protein motA (Motility protein A) [Bartonella
clarridgeiae 73]
Length = 291
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 135/290 (46%), Positives = 199/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I CI+GG+ AMGG+ +LIQP+E VI+ G+ +G F+++NP IKD+ +
Sbjct: 1 MGVIIGLVIIFGCILGGYVAMGGHLDVLIQPWEFVIILGSAIGTFIVSNPFPAIKDTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E Q + +L LLY+LM ++ SR+E E HID+P ST+F P +L++
Sbjct: 61 TIEAMKDAVPKQKDFLALLGLLYVLMREMRSKSRSEMEGHIDNPKESTLFQQYPLILKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I ++ KPY A+ +M ++LPA+GIV A
Sbjct: 121 SLTNFICDYCRLIVMGNTRHFEIEALMDEEIHTISHDSQKPYQAMQNMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG +S+ P++LG IG +L GT GI +Y + P+ S+IK+ R K+ R+YI+
Sbjct: 181 VLGVVKAMGAISEPPEVLGHLIGAALVGTFAGIFFAYGIFGPIASKIKTVRNKKVRIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGAIPQ+A+EYGRK + +RP+I++V Q + +K +
Sbjct: 241 VKQTLLAYMNGAIPQIALEYGRKTISAKDRPTIDVVEQHAIAGQGTEKEA 290
>gi|323258568|gb|EGA42234.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
Length = 284
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 98/277 (35%), Positives = 157/277 (56%)
Query: 12 LCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
+ GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + ++ +F
Sbjct: 1 GTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKAIPLLFRRSKYT 60
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
+ Y D+L LLY LM ++ E I++P S IF S P +L + + FI DY+R
Sbjct: 61 KSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADTVMLDFIVDYLR 120
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+II GN +EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+ +
Sbjct: 121 LIISGNMNPFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAVMGVVHALASA 180
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
+ LG I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +NG
Sbjct: 181 DRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCVKITLLSNLNG 240
Query: 252 AIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
P +A+E+GRK L SERPS + + V + +
Sbjct: 241 YAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQ 277
>gi|291613012|ref|YP_003523169.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583124|gb|ADE10782.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 284
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 90/284 (31%), Positives = 156/284 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GGF GG+ L QP E++++ G LG F + N +K +K +
Sbjct: 1 MLVIVGYIVVLASVFGGFALAGGHLGALFQPIELLMIGGGALGAFFVGNTMKSVKATFKD 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + +++Y +++ L+Y L+ ++K E +++P S +F P VL ++
Sbjct: 61 LPTVLKGAKYNKESYMELMALMYELLGKVRKEGLMSIEGDVENPEESPVFAKYPKVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ DY+R+++ GN + EIENLMD EI+ +E + H I+ +G+ +PA GIV A
Sbjct: 121 HAVEFMTDYLRIMVSGNLNAMEIENLMDVEIETHHHEAMVSSHVIAKLGDGMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL ++ + ++
Sbjct: 181 VMGVVHTMESVGIPPAELGMLIAHALVGTFLGILLAYGFVGPLAGLLEQKAEEGSKMLQA 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A +NG P +A+E+GRK L +ERP + + V Q
Sbjct: 241 IKVVLLANLNGYAPAMAVEFGRKALNSTERPGFVELEEHVKQKR 284
>gi|110632664|ref|YP_672872.1| flagellar motor protein MotA [Mesorhizobium sp. BNC1]
gi|110283648|gb|ABG61707.1| flagellar motor protein MotA [Chelativorans sp. BNC1]
Length = 295
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 150/295 (50%), Positives = 212/295 (71%), Gaps = 5/295 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL +T+ C+IGGF AMGG+ +LIQP+E+VI+ GA LG F++ANP+ +KD+G +
Sbjct: 1 MGILLGLVVTLGCVIGGFMAMGGHLEVLIQPWELVIIGGAALGTFLVANPMSTVKDAGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LE F ++ + Y + L +L+ LM L+ SR+E E HID+P S IF + PTVL+N
Sbjct: 61 CLEAFKHQVPKETEYLETLGVLHSLMRELRSKSRSEVEAHIDNPEESAIFQAFPTVLKNY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+II+GNAR +EIE LMDEEI I +KLK YHA+ + + LPA+GIV A
Sbjct: 121 DLTHFICDYCRLIIIGNARPFEIEALMDEEIQTIRRDKLKSYHALQAVADGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG +G +L GT LGI LSY++ P+ +++K R K++RLY+I
Sbjct: 181 VLGVIKAMGALDQSPEVLGALVGAALVGTFLGIFLSYAVIGPIATKVKIVREKKNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL-----QYNHNKKAS 290
VK+ L+AYMNG++PQVA+E+GRK + +RPSI+ V Q+ L KKA+
Sbjct: 241 VKQTLLAYMNGSLPQVALEFGRKTISAYDRPSIDAVEQKTLGQAPAGAAPEKKAA 295
>gi|289207763|ref|YP_003459829.1| chemotaxis (motility protein A) transmembrane [Thioalkalivibrio sp.
K90mix]
gi|288943394|gb|ADC71093.1| putative chemotaxis (motility protein A) transmembrane
[Thioalkalivibrio sp. K90mix]
Length = 283
Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats.
Identities = 94/283 (33%), Positives = 163/283 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GGF A GG+ ++ QP+E +I+ GA LG F++ANP +V+ S
Sbjct: 1 MKYILGFLVVLFAVFGGFAAHGGDLLVIWQPYEYIIIGGAALGSFLIANPPRVVLTVFKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ ++ Y D+L L+Y L +K EN I++P NS +F + P VL ++
Sbjct: 61 LPKLLQGSKYKREDYLDLLALMYKLFTKARKEGLMGVENDIEEPENSELFQAHPRVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI DYMR+II G+ +E++ LMD +++ E KP HA+ + ++LP GIV A
Sbjct: 121 HAMEFITDYMRLIISGSMNPHELDALMDLDLETHHEEAHKPSHAVYRVADALPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ +++G + +L G+ LGI+L+Y P ++ +++ ++ +
Sbjct: 181 VLGIVNTMGSIGGPIEVIGMNVAAALVGSFLGILLAYGFVGPTSAALEARAQEEGKFLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
VK ++A + G PQVA+E+GRK + + RP+ + + V
Sbjct: 241 VKACILANVQGYSPQVAVEFGRKTMEGAMRPTFLELEEHVKAA 283
>gi|296161289|ref|ZP_06844097.1| flagellar motor component-like protein [Burkholderia sp. Ch1-1]
gi|295888447|gb|EFG68257.1| flagellar motor component-like protein [Burkholderia sp. Ch1-1]
Length = 289
Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats.
Identities = 101/289 (34%), Positives = 159/289 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I ++G F +GG+ LIQPFE++ + GA +G FV++NP +K + +
Sbjct: 1 MFVAIGWVLVIGSVLGSFIGVGGHLPALIQPFELLCIFGAAIGAFVVSNPTSTLKKTIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P +S IF P VLE++
Sbjct: 61 IPSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEAEVGAPKDSVIFQKYPHVLEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAESAVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + + Y
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPLADLLTAKGRAEGKPYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A ++G P +A+E+GRKVL ++RPS + + V K A
Sbjct: 241 VKAVLLASLSGYAPAIAVEFGRKVLFTADRPSFQELDDAVRATKTPKSA 289
>gi|323139661|ref|ZP_08074703.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
gi|322395093|gb|EFX97652.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
Length = 291
Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats.
Identities = 145/290 (50%), Positives = 209/290 (72%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS IIGL +T+ C++GGF A+GG+ +L QP+E VI+ G+ LG F++ANP+KVIKD+G +
Sbjct: 1 MSFIIGLIVTMGCMLGGFAALGGHLIVLWQPWEFVIIMGSALGTFIVANPVKVIKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ K + Y D+L LL+ LM L+ +RNE E HID P S +FT+ P VL+N
Sbjct: 61 VVQAVLEKTPKRRDYLDILGLLHALMRELRSKARNEVEVHIDQPSESPLFTAFPNVLKNT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E+TTFICDY R+ I+GN +++EIE+LMDEE+ I ++KLKPYHA++ +G+ LPA+GIV A
Sbjct: 121 EITTFICDYCRLYIIGNVKTFEIESLMDEEMAEIKHDKLKPYHALTAIGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG ++ GT GI +SY + PL ++K R K+ +Y+I
Sbjct: 181 VLGVIKAMGALDQSPELLGGLIGAAMVGTFAGIFVSYGIMTPLAYKVKVARSKECHVYLI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K+ L+A+MNGA+PQVAIE+GRK +P ERP+I+ V E L +
Sbjct: 241 IKQTLLAFMNGALPQVAIEHGRKSIPSHERPTIDEVENETLSGGGPSAEA 290
>gi|317491634|ref|ZP_07950070.1| chemotaxis protein MotA [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921181|gb|EFV42504.1| chemotaxis protein MotA [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 297
Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats.
Identities = 96/287 (33%), Positives = 168/287 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + ++GG+ +GG+ L QP E++I+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYAVVTIAVLGGYVIVGGHLGALYQPAELLIIAGAGIGAFIVGNNGKAIKATLRT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + Y DV+ L+Y+L+ ++ E I++P S +F++ P +L +
Sbjct: 61 LPKLGRSAKYNKALYMDVMGLMYLLLAKARQQGMLTLERDIENPQESELFSNYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR+++ GN ++EIE LMDEEI+ E P +++ +G+SLPA GIV A
Sbjct: 121 ILIEFITDYMRLMVSGNMNAFEIEALMDEEIETFESEAEGPADSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFVSPLASLMRQNCAETVKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+K L++ ++G PQ+A+E+GRK L +ERPS + + V Q
Sbjct: 241 IKTTLLSSLHGYAPQIAVEFGRKTLYSTERPSFMELEEHVRQVKSPA 287
>gi|323529506|ref|YP_004231658.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323386508|gb|ADX58598.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 294
Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats.
Identities = 99/290 (34%), Positives = 159/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ L+QPFE++ + GA +G FV++NP+ +K + +
Sbjct: 1 MFVAIGWVLVIGSVIGSFVGVGGHLPALVQPFELLCIFGAAIGAFVVSNPISTLKKTLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P S IF P VL ++
Sbjct: 61 IPSCFKNGGYTKEKYLELIALLYELLQKARKEGMMSLEADVFAPEESVIFQKYPHVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPLADLLNAKGRAEAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L+A ++G P +A+E+GRKVL ++RPS + + V K A+
Sbjct: 241 VKAVLLASLSGYAPPIAVEFGRKVLFTADRPSFQELDDAVRATKTPKPAA 290
>gi|167838310|ref|ZP_02465169.1| flagellar motor protein MotA [Burkholderia thailandensis MSMB43]
Length = 286
Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats.
Identities = 102/285 (35%), Positives = 170/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALVQPVEILMIVGAGVGAFIIGNGIKTIKATLRV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + +D Y +++ LLY+L+ +K E ID+P S IFT P +L ++
Sbjct: 61 LPTLLKGSKYNKDIYMELMALLYVLLAKARKEGTLTLEADIDEPEKSPIFTQYPKILADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A
Sbjct: 121 HIVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL+S + + +++
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLSSLAEQRVAESTKMFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|238025854|ref|YP_002910085.1| flagellar motor protein MotA [Burkholderia glumae BGR1]
gi|124695900|gb|ABN14294.1| MotA [Burkholderia glumae BGR1]
gi|124695930|gb|ABN14298.1| MotA [Burkholderia glumae BGR1]
gi|237875048|gb|ACR27381.1| MotA [Burkholderia glumae BGR1]
Length = 286
Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats.
Identities = 105/285 (36%), Positives = 170/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G +T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK + +
Sbjct: 1 MLIIVGTLVTLLSVFGGYALAGGHLGALVQPLEILMIVGAGVGAFILGNGVKTIKATLLV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPPLFKSSKYTKALYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HMVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHVEGEGPAHALTRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +L
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKLLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|224824156|ref|ZP_03697264.1| flagellar motor protein MotA [Lutiella nitroferrum 2002]
gi|224603575|gb|EEG09750.1| flagellar motor protein MotA [Lutiella nitroferrum 2002]
Length = 286
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 97/285 (34%), Positives = 167/285 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + +L ++GGF GG+ L+QP E++++ GA +G FV+AN +K + +
Sbjct: 1 MFVGIGYVVILLSVLGGFVMAGGHLAALLQPLEVLMIGGAAIGAFVVANGGTPLKATLAA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + Y ++ LL+ ++ ++K E +D+P +S +F+ P VL ++
Sbjct: 61 LPTLFKGSSYTKAFYMELFALLFEILAKVRKEGLMSVEADVDNPESSPVFSKYPAVLHDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FICDY+R+++ GN ++EIENLMD EI+ +E P +A+ + + +PA GIV A
Sbjct: 121 HVVEFICDYLRLMVGGNLNAFEIENLMDVEIETHHHEGEVPVNAMKGLADGMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL + ++ R++
Sbjct: 181 VMGVVHTMESVGIPPSELGMLIAHALVGTFLGILLAYGFVGPLATILEHKLADGTRVFQT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A +NG PQV++E+GRKVL +RPS + + V Q +
Sbjct: 241 IKVTLLASLNGYAPQVSVEFGRKVLASHDRPSFKELEDHVKQAKN 285
>gi|182679716|ref|YP_001833862.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635599|gb|ACB96373.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 296
Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats.
Identities = 156/289 (53%), Positives = 211/289 (73%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG I + C++GGF AMGG+ ++ QP+E VI+ G+ LG F++AN + IKD+G +
Sbjct: 1 MGFLIGTIIAVGCMLGGFAAMGGHIVVIWQPWEFVIICGSALGTFIVANNVLTIKDTGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E K+L Q Y DVL +LY LM ++ +RNE E H+D+P STIF + P VL N
Sbjct: 61 LGEAIMDKSLKQRDYLDVLGVLYTLMREMRGKARNEVEEHVDNPEESTIFQNFPRVLANK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY R+II+GNAR++EIE LMDEEI+ IL++ LKPYHAI+ + ESLPA+GIV A
Sbjct: 121 ELTNFICDYCRLIIIGNARTHEIEALMDEEIETILHDTLKPYHAITIVAESLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI LSY L +PL ++I++TR KQ RLYII
Sbjct: 181 VLGVIKAMGALDQSPELLGGLIGSALVGTFAGIFLSYGLLSPLANKIRATREKQSRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK+ L+A+MNGA+PQ+A+E+GRK + ++RPSI+IV E + K
Sbjct: 241 VKQTLLAFMNGAMPQIALEHGRKTISSADRPSIDIVENETVTGGTGKAG 289
>gi|226941126|ref|YP_002796200.1| flagellar motor protein MotA [Laribacter hongkongensis HLHK9]
gi|226716053|gb|ACO75191.1| MotA1 [Laribacter hongkongensis HLHK9]
Length = 286
Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats.
Identities = 99/285 (34%), Positives = 162/285 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + +IGGF GG+ L+QP E+VI+ GAG G F+ AN ++ + +
Sbjct: 1 MFVIIGYILVLGSVIGGFMMAGGHVAALLQPNELVIIFGAGTGAFLAANGGAPLRATMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++F + Y ++ LL+ ++ ++K E +D P S IF+ P ++ ++
Sbjct: 61 LPQLFKGDKYNKALYMELFALLFEVLTKVRKEGLMSIEADVDAPQESPIFSKYPVIVNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FICDY+R+++ GN +EIENLMD EI+ +E P A++ M + LPA GIV A
Sbjct: 121 HVIDFICDYLRLMVGGNLNPFEIENLMDIEIETHHHEGSVPVGALAKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+LSY PL+++++ R+
Sbjct: 181 VMGVVHTMESVGIPPAELGKLIAAALVGTFLGILLSYGFIAPLSNRLEYKVNDVTRVLTT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A +NG PQVA+E+GRK L ++RP + + V +
Sbjct: 241 IKVTLLASLNGYAPQVAVEFGRKALYGADRPGFLELEEHVKSAKN 285
>gi|118589945|ref|ZP_01547349.1| flagellar motor protein MotA [Stappia aggregata IAM 12614]
gi|118437442|gb|EAV44079.1| flagellar motor protein MotA [Stappia aggregata IAM 12614]
Length = 298
Score = 314 bits (806), Expect = 6e-84, Method: Composition-based stats.
Identities = 141/285 (49%), Positives = 199/285 (69%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +IGL I +IGGF A+GG +L QP+E+VI+ G +G FV+ANP+KVIK + V+
Sbjct: 1 MTILIGLIIAGASLIGGFAALGGKVSVLWQPWELVIILGVAIGAFVVANPMKVIKGTLVA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + Y DVL LLY LM L+ RN+ E HI+DP S IF P+VL N
Sbjct: 61 VSDALRNAVPNKREYLDVLALLYGLMRELRAKGRNQVEPHIEDPNTSPIFQKYPSVLRNA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LTTFICDY R+IIVGNAR++EIE L+DEE+ I +++KPYHA+S + ++LPAIGI+ A
Sbjct: 121 SLTTFICDYFRLIIVGNARAHEIEALVDEELQTIHRDQMKPYHAMSSIADALPAIGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG + QSP++LG+ IG +L GT +GI SYSL P+ S+I++ R + R YI+
Sbjct: 181 VLGVIKAMGAIDQSPQLLGSLIGAALVGTFVGIFFSYSLFGPIASKIRNVRENRLRTYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK+ L+A+MNGA PQ+A+E+GRK + +RP+I+ V E +
Sbjct: 241 VKQTLLAFMNGADPQIALEHGRKTISDYDRPTIDEVENETMSAGG 285
>gi|163856410|ref|YP_001630708.1| flagellar motor protein MotA [Bordetella petrii DSM 12804]
gi|163260138|emb|CAP42439.1| flagellar motor component MotA [Bordetella petrii]
Length = 291
Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats.
Identities = 105/287 (36%), Positives = 169/287 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + ++ +IG F A+GG+ L QPFE+ ++AG LG F+ N K + +
Sbjct: 1 MLIVIGYAVVLVAVIGSFAALGGHMGALYQPFELTLIAGGALGAFLAGNSRKSLALMRRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + ++ Y +++ LLY+L+ ++ E+HI+DP S IF+ P + +++
Sbjct: 61 LPQAIKGAPYSKEVYMELMALLYVLLNKARREGLMAIESHIEDPDASAIFSEYPRIRQDD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P H++ M + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPSHSLQQMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+G + Q +LG I ++ GT LG++L+Y PL S++ + ++
Sbjct: 181 VLGVIKALGAVDQPAAVLGDLISKAMVGTFLGVLLAYGFVAPLASRLDRRTSESVKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+K L+A MNG PQ+A+E+GRKVL + RPS + + V Q
Sbjct: 241 IKVTLLASMNGYPPQLAVEFGRKVLFSTVRPSFGELEEHVRQAKSAA 287
>gi|170692675|ref|ZP_02883837.1| flagellar motor component-like protein [Burkholderia graminis
C4D1M]
gi|170142331|gb|EDT10497.1| flagellar motor component-like protein [Burkholderia graminis
C4D1M]
Length = 294
Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 159/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ LIQPFE++ + GA +G FV++NP +K + +
Sbjct: 1 MFVAIGWLLVIGSVIGSFIGVGGHLPALIQPFELLCIFGAAIGAFVVSNPTSTLKKTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P S IF P VL ++
Sbjct: 61 IPSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEADVFAPEESVIFQKYPHVLSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y PL + + + + +
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPLADLLNAKGRAEAKPFQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L+A ++G P +A+E+GRKVL +++RPS + + V K A+
Sbjct: 241 VKAVLLASLSGYAPPIAVEFGRKVLFIADRPSFQELDDAVRATKTPKPAA 290
>gi|319405394|emb|CBI79013.1| Chemotaxis protein motA [Bartonella sp. AR 15-3]
Length = 291
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 138/290 (47%), Positives = 198/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I I+GG+ AMGG+ +LIQP+E VI+ G+ +G F++ANP IKD+ +
Sbjct: 1 MGVIIGLVIIFGSILGGYVAMGGHIDVLIQPWEFVIILGSAIGTFIVANPFSAIKDTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E Q + +L LLY+LM ++ SR+E ENHID+P ST+F P +L++
Sbjct: 61 TIEAMKDAVPKQKDFLSLLGLLYVLMREMRSKSRSEMENHIDNPKESTLFQQYPLILKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I Y+ KPY A+ M ++LPA+GIV A
Sbjct: 121 SLTNFICDYCRLIVMGNTRHFEIEALMDEEIHTISYDSQKPYQAMQTMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG +S+ P++LG IG +L GT GI +Y + PL S+IK+ R K+ R+YI+
Sbjct: 181 VLGVVKAMGAISEPPEVLGHLIGAALVGTFAGIFFAYGIFGPLASKIKTVRNKKVRIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGAIPQ+AIEYGRK + +RP+I+++ Q + +K +
Sbjct: 241 VKQTLLAYMNGAIPQIAIEYGRKTISAKDRPTIDVMEQHAIAGQGTEKEA 290
>gi|90418399|ref|ZP_01226311.1| chemotaxis protein motA [Aurantimonas manganoxydans SI85-9A1]
gi|90338071|gb|EAS51722.1| chemotaxis protein motA [Aurantimonas manganoxydans SI85-9A1]
Length = 285
Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 142/285 (49%), Positives = 198/285 (69%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL +T+ C++GGF AMGG+ +L+QPFE VI+ G+ +G F++ANP KV+KD+G +
Sbjct: 1 MGILVGLIVTLSCLLGGFVAMGGHLGVLVQPFEYVIILGSSIGTFLVANPTKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E F K Q+ Y VL LL+ LM ++ SR E E HID+P S IF + P ++++
Sbjct: 61 IKEAFANKVPTQNDYLKVLALLHQLMREMRSKSRGEVEAHIDEPKESPIFQAYPELMKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY R+II+GNAR +EIE LM+EEI I ++LKP HA+ M + LPA+GIV A
Sbjct: 121 SLVHFICDYCRLIIIGNARPHEIEALMEEEIQTISSDRLKPKHALQDMADGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG +L GT GI SY + P+ +++KS R K R+++I
Sbjct: 181 VLGVIKAMGALDQSPEVLGHLIGAALVGTFAGIFFSYGVVGPVATKVKSVREKNIRVFVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ LIAYMNGAIPQVA+EYGRK + +RPSI+ V E +
Sbjct: 241 VRSTLIAYMNGAIPQVALEYGRKTISAYDRPSIDQVETETIGGGA 285
>gi|82776485|ref|YP_402834.1| flagellar motor protein MotA [Shigella dysenteriae Sd197]
gi|309789306|ref|ZP_07683897.1| chemotaxis protein motA [Shigella dysenteriae 1617]
gi|81240633|gb|ABB61343.1| proton conductor component of motor [Shigella dysenteriae Sd197]
gi|308922841|gb|EFP68357.1| chemotaxis protein motA [Shigella dysenteriae 1617]
Length = 295
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 101/290 (34%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P ++ ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRIIADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIEPHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG I ++ GT LGI+L+Y +PL S ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SER S + + V + ++ +
Sbjct: 241 VKVTLLSNLNGYAPPIAVEFGRKTLYSSERLSFIELEEHVRAVKNPQQQT 290
>gi|34497481|ref|NP_901696.1| flagellar motor protein MotA [Chromobacterium violaceum ATCC 12472]
gi|34103336|gb|AAQ59698.1| chemotaxis motA protein [Chromobacterium violaceum ATCC 12472]
Length = 284
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 101/284 (35%), Positives = 166/284 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I + ++GGF A GG+ L+QP E+V++AGA +G F++AN +K + +
Sbjct: 1 MFVGIGYLIILGSVLGGFIAAGGHVAALMQPLEVVMIAGAAIGAFIVANGGAPLKATTKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F G+ Y D+ LL+ ++ ++K E +++P S +F+ PT++ ++
Sbjct: 61 LPTVFKGSPYGKAFYMDLFSLLFEILTKVRKEGLMSIEADVENPEASPVFSKYPTIMHDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FICDY+R+++ GN ++EIENLMD EI+ +E P A+ + + LPA GIV A
Sbjct: 121 HVVEFICDYLRLMVGGNLNAFEIENLMDVEIETHHHEGEVPVSAVKGLADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y PL + ++ + R+Y
Sbjct: 181 VMGVVHTMESVGAPPSELGMLIAHALVGTFLGILLAYGFVGPLGTILEHKLAEGTRVYQT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A +NG PQVA+E+GRK L +RPS + + V Q
Sbjct: 241 IKVTLLASLNGYAPQVAVEFGRKALSSMDRPSFKELEDHVKQKK 284
>gi|330815145|ref|YP_004358850.1| MotA [Burkholderia gladioli BSR3]
gi|327367538|gb|AEA58894.1| MotA [Burkholderia gladioli BSR3]
Length = 286
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 104/285 (36%), Positives = 169/285 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G +T+L + GG+ GG+ LIQP E++++ GAG+G F++ N +K+IK +
Sbjct: 1 MLIFVGTLVTLLSVFGGYALAGGHLGALIQPLEVLMIVGAGVGAFILGNGIKMIKATLRL 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y +++ LLY+L+ +K E IDDP S IFT P +L +
Sbjct: 61 LPTLFKSSKYTKALYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN ++EIE+LMDEEI+ E P HA++ +G+++PA GIV A
Sbjct: 121 HMVEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHVEVEGPAHALTRVGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M + + P +LG I +L GT LGI+LSY L PL S + + +L
Sbjct: 181 VMGVVHTMASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRAAESTKLLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 IKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 285
>gi|187920654|ref|YP_001889686.1| flagellar motor component-like protein [Burkholderia phytofirmans
PsJN]
gi|187719092|gb|ACD20315.1| flagellar motor component-like protein [Burkholderia phytofirmans
PsJN]
Length = 289
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 99/289 (34%), Positives = 157/289 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG + I +IG F +GG+ L+QPFE++ + GA +G FV++NP +K + +
Sbjct: 1 MFVAIGWLLVIGSVIGSFVGVGGHLPALLQPFELLCIFGAAIGAFVVSNPTSTLKKTIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ Y +++ LLY L+ +K E + P S IF VLE++
Sbjct: 61 IPSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEADVGAPEESVIFQKYSHVLEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+RM+ GN E+++LMDEE+ E +AI M + LPA GIV A
Sbjct: 121 HLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG I +L GT LGI+L+Y P+ + + + + Y
Sbjct: 181 VMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPVADLLNAKGRAEAKPYQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK L+A ++G P +A+E+GRKVL ++RPS + + V K A
Sbjct: 241 VKAVLLASLSGYAPPIAVEFGRKVLFTADRPSFQELDDAVRATKMPKSA 289
>gi|226193298|ref|ZP_03788908.1| chemotaxis protein MotA [Burkholderia pseudomallei Pakistan 9]
gi|254298790|ref|ZP_04966241.1| chemotaxis protein MotA [Burkholderia pseudomallei 406e]
gi|157808541|gb|EDO85711.1| chemotaxis protein MotA [Burkholderia pseudomallei 406e]
gi|225934898|gb|EEH30875.1| chemotaxis protein MotA [Burkholderia pseudomallei Pakistan 9]
Length = 278
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 102/277 (36%), Positives = 167/277 (60%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+T+L + GG+ GG+ L+QP EI+++ GAG+G F++ N +K IK + L +F
Sbjct: 1 MTLLSVFGGYALAGGHLGALVQPVEILMIVGAGVGAFIIGNGIKTIKATLRVLPTLFKGS 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+D Y +++ LLY+L+ +K E IDDP S IFT P +L ++ + F+ D
Sbjct: 61 KYNKDIYMELMALLYVLLAKARKEGTLTLEADIDDPEKSPIFTQYPKILADHHIVEFLTD 120
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
Y+R+++ GN ++EIE+LMDEEI+ E P HA+ +G+++PA GIV A++G++ M
Sbjct: 121 YLRLMVGGNMNAFEIESLMDEEIETHHAEGEGPAHALMRVGDAMPAFGIVAAVMGVVHTM 180
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ + P +LG I +L GT LGI+LSY L PL S + + +++ +K ++A
Sbjct: 181 ASADKPPAVLGAMIAQALVGTFLGILLSYGLIGPLASLAEQRVAESTKMFQCIKVTILAS 240
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+NG P +A+E+GRKVL +ERPS + + V +
Sbjct: 241 LNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVKA 277
>gi|33592171|ref|NP_879815.1| flagellar motor protein MotA [Bordetella pertussis Tohama I]
gi|33596123|ref|NP_883766.1| flagellar motor protein MotA [Bordetella parapertussis 12822]
gi|33601522|ref|NP_889082.1| flagellar motor protein MotA [Bordetella bronchiseptica RB50]
gi|33571816|emb|CAE41325.1| chemotaxis protein MotA [Bordetella pertussis Tohama I]
gi|33573126|emb|CAE36771.1| chemotaxis protein MotA [Bordetella parapertussis]
gi|33575958|emb|CAE33037.1| chemotaxis protein MotA [Bordetella bronchiseptica RB50]
gi|332381587|gb|AEE66434.1| flagellar motor protein MotA [Bordetella pertussis CS]
Length = 291
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 107/287 (37%), Positives = 172/287 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + IL ++G F +GG+ L QPFE+ ++AGA +G F+ N K + +
Sbjct: 1 MLIVIGYAVVILAVVGSFIGLGGHLGALYQPFELTLIAGAAVGAFMAGNSRKSLGLVAKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E F +D Y +++ LLY+L+ ++ E+HI+DP +S IF P ++++
Sbjct: 61 IPEAFRSSPYSKDVYMELMALLYVLLNKARREGLMAIESHIEDPLSSPIFNEYPRIMKDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P HA+ + ++LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPTHALQQVADALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P ILG I ++ GT LG++L+Y P+ ++I+ + ++
Sbjct: 181 VLGVIKALAAVDQPPAILGDLISKAMVGTFLGVLLAYGFVAPMAARIERRTSESVKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+K L+A MNG PQ+A+E+GRKVL + RPS + + V Q
Sbjct: 241 IKVTLLASMNGYPPQLAVEFGRKVLFSAVRPSFGELEEHVRQAKSAA 287
>gi|120555690|ref|YP_960041.1| flagellar motor component [Marinobacter aquaeolei VT8]
gi|120325539|gb|ABM19854.1| flagellar motor component [Marinobacter aquaeolei VT8]
Length = 283
Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 99/282 (35%), Positives = 165/282 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + C++GG+ GGN +L QP EI+I+ GA +G F++ANPL +K+ +
Sbjct: 1 MLLIIGAVVVVACVLGGYVLHGGNLAVLWQPTEILIIGGAAVGSFIIANPLHTVKEVFQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + Y D+L LLY + +K E ID+P +S IF+ P ++++
Sbjct: 61 CIRLLTGSPFNKSYYMDLLSLLYEVFDKSRKQGVMAIEEDIDNPESSQIFSRYPAIMKSK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I GN +E+E +M+ EI+ +E +P HA++ + ++LP +GIV A
Sbjct: 121 HLLDFITDYLRIISSGNMAPHELEGMMENEIENRQHELEEPAHAVNKIADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG L++ P+ +G ++ +L GT LGI + Y P + ++ + + Y
Sbjct: 181 VLGIVITMGFLTEGPEKIGLSVAAALVGTFLGIWMGYGFVGPTSIALEHAAKYELKAYEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK A++A ++G PQ+AIE+GRK LP +RP + + V
Sbjct: 241 VKSAIVATVSGQAPQMAIEFGRKALPTEKRPGFQELNDHVRS 282
>gi|238796915|ref|ZP_04640419.1| hypothetical protein ymoll0001_33250 [Yersinia mollaretii ATCC
43969]
gi|238719175|gb|EEQ10987.1| hypothetical protein ymoll0001_33250 [Yersinia mollaretii ATCC
43969]
Length = 297
Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 99/290 (34%), Positives = 169/290 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I IL + GGF GG L QP E++I+ GAG+G F++ N K I + +
Sbjct: 1 MLVIIGYLIVILTVFGGFSLSGGVLGALYQPTELLIIGGAGIGAFIVGNNGKSINATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D++ ++Y+L+ ++ E I+DP NS IF++ P +L ++
Sbjct: 61 LPHLFRGSHYTKVLYMDLMAMMYLLLNKGRQNGLMALEQDIEDPKNSAIFSAYPRLLADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ DY+R+++ G+ ++EIE LMDEEI+ +E P +++ +G+ LPA GIV A
Sbjct: 121 ALMNFVIDYLRLMVSGSMNAFEIEALMDEEIETCEHEHEVPAQSLNEIGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + LG I ++ GT LGI+L+Y PL S ++ +Q ++
Sbjct: 181 VMGVVNALAAADRPAAELGELIAHAMVGTFLGILLAYGFVLPLASLLRQKSSEQIKILQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
++ L++ MNG PQ+A+E+GRK+L +ERP+ + + V + + +S
Sbjct: 241 IRVTLLSSMNGYAPQIAVEFGRKILFSTERPTFIELEEHVREVKSSANSS 290
>gi|114706760|ref|ZP_01439660.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
gi|114537708|gb|EAU40832.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
Length = 287
Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats.
Identities = 136/287 (47%), Positives = 197/287 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G+ + + C++GGF AMGG+ +L+QPFE VI+ G+ G F++ANP KVIKD G +
Sbjct: 1 MGILLGMVVVLGCLLGGFVAMGGHLGVLVQPFEYVIICGSSFGTFLVANPPKVIKDCGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E F Q Y ++L LL+ +M ++ SR+E E H+D P STIF + PT+L++
Sbjct: 61 IGEAFKNAVPKQKDYLEILGLLHAMMREMRSKSRSEVEAHVDAPEESTIFQAYPTILKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FICDY+R+IIVG+ARS+EIE LM+EEI+ I ++ +KP A+ + + LPA+GIV A
Sbjct: 121 QKVNFICDYVRLIIVGSARSHEIEALMEEEIETITHDAMKPKAALQDVADGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP+ILG I +L GT G+ SY + P+ S++KS R K+ R Y++
Sbjct: 181 VLGVIKAMGALDQSPEILGGLIAAALVGTFAGVFFSYGVMGPIASKVKSVREKKCRTYVV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+K LIAYMNGA+PQVAIEYGRK + +RP+I+ V E +
Sbjct: 241 IKSTLIAYMNGAMPQVAIEYGRKTISAYDRPTIDQVEAETIGGGATA 287
>gi|319409194|emb|CBI82838.1| Chemotaxis protein motA [Bartonella schoenbuchensis R1]
Length = 291
Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 140/291 (48%), Positives = 205/291 (70%), Gaps = 1/291 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL +T+ CIIGG+ AMGG+ +L+QP+E VI+ G+ +G F+++NP VIKD+ +
Sbjct: 1 MGVIIGLVLTLGCIIGGYVAMGGHLDVLVQPWEFVIILGSAIGIFIVSNPFSVIKDAMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LE Q + L LLY+LM ++ SR+E E H+D+P S +F P VL+++
Sbjct: 61 TLEATTDAVPKQKDFLATLGLLYVLMREMRSKSRSEMEGHVDNPRESALFQQYPLVLKDS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT+FICDY R+II+GNAR +EIE LMDEEI I+ + K HA+ +M ++LPA+GIV A
Sbjct: 121 SLTSFICDYCRLIIMGNARPFEIEALMDEEIHTIVKDSEKSSHALQNMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S+ P++LG IG +L GT GI SYS+ +P+ ++IK+ R K+ R+YI+
Sbjct: 181 VLGVIKAMGAISEPPEVLGRLIGAALVGTFAGIFFSYSVFSPIATKIKTVRHKKTRIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL-QYNHNKKAS 290
VK+ L+AYMNGAIPQ+A+EYGRK + +RP+I++V Q + K+A+
Sbjct: 241 VKQTLLAYMNGAIPQIALEYGRKTISAKDRPTIDVVEQHTIVGPGAEKEAA 291
>gi|297517350|ref|ZP_06935736.1| flagellar motor protein MotA [Escherichia coli OP50]
Length = 284
Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 100/279 (35%), Positives = 163/279 (58%)
Query: 12 LCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
+ GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +L +F
Sbjct: 1 GTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKALPLLFRRSKYT 60
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
+ Y D+L LLY LM ++ E I++P S IF S P +L ++ + FI DY+R
Sbjct: 61 KAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADSVMLDFIVDYLR 120
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+G+
Sbjct: 121 LIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAAVMGVVHALGSA 180
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
+ LG I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +NG
Sbjct: 181 DRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQCVKVTLLSNLNG 240
Query: 252 AIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 241 YAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 279
>gi|241763662|ref|ZP_04761712.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241367137|gb|EER61503.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 286
Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 105/286 (36%), Positives = 158/286 (55%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG FIT C+ G F A GGN +L++ PFE++ + GA LG F++ N KV+K +
Sbjct: 1 MFVIIGYFITFGCVFGVFVAHGGNIKVLLEALPFEMITIGGAALGSFIVTNQTKVLKSTM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F + Y +++ +LY ++ +K E ++ P S IF PTV
Sbjct: 61 AVLPQVFKGNKYTKARYMELMAMLYDILQKARKEGLMAIEKDVEAPAESEIFKKYPTVGG 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN S+EIE+LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DHHVIEFTTDYLRMMVSGNLNSHEIESLMDSEIETHHQEAHAPVAALTRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y PL ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPSVLGGMIASALVGTFLGILLAYGAVEPLAGLLEQKAEDAAKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P AIE+GRKVL +ERPS + V
Sbjct: 241 HCIKSTLLASMQGYNPATAIEFGRKVLFSTERPSFSELEGHVKGKK 286
>gi|288942641|ref|YP_003444881.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288898013|gb|ADC63849.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 284
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 101/284 (35%), Positives = 155/284 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ I+G I I ++GGF A GG+ L QPFE+VI+ GA GGFV+ANP+ V+ S S
Sbjct: 1 MNFILGSLIVIASVLGGFAAGGGHIIALWQPFELVIILGAAGGGFVIANPMSVVVQSLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y + L LY L +K E I++P +S +F P +L+++
Sbjct: 61 IPALFTGAKYKKAHYMEALGFLYELFNKARKEGLMGIEPDIEEPESSALFQKYPLILKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T FI DYMR+++ GN +E+ENLMD EI+ + HA+ + + LPA GIV A
Sbjct: 121 HATEFISDYMRLVVSGNMNPFELENLMDVEIETHHHATAATSHAVQQVADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M L +G + +L GT GI++SY P+ S + ++ R
Sbjct: 181 VLGIVHTMAALGGPMSEIGGLVAAALVGTFSGILISYGFVGPIASYLGRLADEETRYLSC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K ++A + G PQVA+E+GRK +P RP+ + Q +
Sbjct: 241 IKACILANVQGYSPQVAVEFGRKTMPPELRPNFQEFEQHLRGTK 284
>gi|183598598|ref|ZP_02960091.1| hypothetical protein PROSTU_01996 [Providencia stuartii ATCC 25827]
gi|188020775|gb|EDU58815.1| hypothetical protein PROSTU_01996 [Providencia stuartii ATCC 25827]
Length = 295
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 95/284 (33%), Positives = 158/284 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG I +IGG+ +GG+ L QP E VI+ GAG G FV+ N K I
Sbjct: 1 MLILIGYIIVTGTVIGGYLMLGGHLGALYQPAEFVIILGAGFGAFVVGNSGKSIIALCKV 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + D++ LL+ L+ ++ E I++P S IF+ P VL++
Sbjct: 61 LPRVFRRSSYNKAMSMDLMALLFQLLNKSRQEGLLALEKDIENPQESEIFSQYPRVLKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ DY+R+++ N +S+EIE LMDEE++ E P ++ +G+S+PA GIV A
Sbjct: 121 TTLMFVVDYLRLMVTSNLQSHEIEALMDEELETFRQESEVPASGLNMVGDSMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ A+G+ + LG I ++ GT LGI+++Y PL + I+ +Q ++
Sbjct: 181 VLGVVNALGSADRPAGELGALIAHAMVGTFLGILVAYGFILPLAALIRLRTNEQLKMLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K ++ + G PQ+A+E+GRKVL ++RPS + +V +
Sbjct: 241 IKVTFLSALQGYAPQIAVEFGRKVLYSADRPSFMELEDKVREVK 284
>gi|319403953|emb|CBI77541.1| Chemotaxis protein motA [Bartonella rochalimae ATCC BAA-1498]
Length = 291
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 132/290 (45%), Positives = 200/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I CI+GG+ AMGG+ +L+QP+E VI+ G+ +G F+++NP+ IKD+ +
Sbjct: 1 MGVIIGLIIIFGCILGGYVAMGGHLDVLVQPWEFVIILGSAIGTFIVSNPIPAIKDTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E Q + +L LLY+LM ++ S++E E H+D+P S +F P +L++
Sbjct: 61 TIEAMKDAVPKQKDFLSLLGLLYVLMREMRSKSKSEMEAHVDNPKESALFQQYPLILKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I Y+ KPY A+ +M ++LPA+GIV A
Sbjct: 121 SLTNFICDYCRLIVMGNTRPFEIEALMDEEIHTISYDSQKPYQAMQNMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG +S+ P++LG IG +L GT GI +Y + PL S+IK+ R K+ R+YI+
Sbjct: 181 VLGVVKAMGAISEPPEVLGHLIGAALVGTFAGIFFAYGIFGPLASKIKTVRNKKVRIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGA+PQ+A+EYGRK + +RP+I+I+ Q + ++K +
Sbjct: 241 VKQTLLAYMNGAMPQIALEYGRKTISAKDRPTIDIMEQHAIASQGSEKEA 290
>gi|296447446|ref|ZP_06889371.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296255066|gb|EFH02168.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 289
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 148/289 (51%), Positives = 200/289 (69%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +GL IT+ C+ GGF A+GG+ +L QP+E VI+ G+ LG FV+ANP KVI DSG +
Sbjct: 1 MGFFVGLIITMGCMFGGFAALGGHLVVLWQPWEFVIIMGSSLGTFVIANPTKVIIDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K Y DVL LL+ LM L+ RNE E H+D+P S IFT+ P VLEN
Sbjct: 61 IGQAIMGKGPKHRDYLDVLGLLHALMRELRSKPRNEVEAHVDNPAESKIFTAFPKVLENK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E+T FICDY R+ I+GN R++EIE LMDEEI I Y++LKPYHA++ +G+ LPA+GIV A
Sbjct: 121 EMTAFICDYCRLFIIGNVRTFEIEALMDEEIAAIRYDRLKPYHALTSVGDGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSP++LG IG ++ GT GI +SY + PL +IK R K+ LY+I
Sbjct: 181 VLGVIKAMGALDQSPELLGGLIGAAMVGTFAGIFVSYGVITPLAFKIKVARTKECHLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+K+ L+A+MNG +PQVA+E+GRK +P ERP+I+ V E L + A
Sbjct: 241 IKQTLLAFMNGGMPQVAVEHGRKSIPSYERPTIDEVENETLSGGAAEAA 289
>gi|296103599|ref|YP_003613745.1| chemotaxis protein MotA [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058058|gb|ADF62796.1| chemotaxis protein MotA [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 313
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 105/286 (36%), Positives = 172/286 (60%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
I+G + IL + GGF GGN L QP E++I+ GAG+G F++ N +K +K +G +L
Sbjct: 17 LVIVGYLVVILTVFGGFLLSGGNLMALFQPLELLIIGGAGVGAFIVGNNVKSLKSTGKAL 76
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++IF K + Y D++ L+++L+ + E I+DP NS IF++ P ++ +
Sbjct: 77 VKIFVGKRYNKAVYMDLMALMFLLLSQSRVHGLMSLEKDIEDPQNSDIFSAYPRLMSDPM 136
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L FI DY R++I G+ S+EIE LMDEEI+ E P H+++ +G++ PA GIV A+
Sbjct: 137 LANFILDYFRLMIGGSMNSHEIEALMDEEIETCEEELEVPAHSLNTVGDAFPAFGIVAAV 196
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+G+ + LG IG +L GT LGI+++Y PL + ++ Q ++ +
Sbjct: 197 MGVVNALGSADRPAAELGMLIGHALVGTFLGILIAYGFVLPLATLLRQKSSDQVKILQCI 256
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
K L++ +NG PQ+A+E+GRK + SERPS E + + V + N
Sbjct: 257 KVTLLSSLNGYAPQIAVEFGRKTIFTSERPSFEELEEHVREVKSNA 302
>gi|325291947|ref|YP_004277811.1| flagellar motor protein MotA [Agrobacterium sp. H13-3]
gi|45479282|gb|AAS66684.1| MotA [Agrobacterium sp. H13-3]
gi|325059800|gb|ADY63491.1| flagellar motor protein MotA [Agrobacterium sp. H13-3]
Length = 290
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 180/290 (62%), Positives = 232/290 (80%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +IGL IT CIIGG+ AMGG+ +L+QPFE++I+ GAGLGGF+MANP+KV+KDSG +
Sbjct: 1 MNIVIGLIITFGCIIGGYMAMGGHLDVLVQPFELLIIGGAGLGGFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y DVL +LY LM +L+ SRNE E HID+P S+IF S P+VL+N
Sbjct: 61 LGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT+FICDY+R+II+GNARS+EIE LMDEEI+ IL++KLKPYHAI+ MG+S PAIGIV A
Sbjct: 121 ELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++SP++LG IG +L GT+LGIILSYS+CNPL SQ+K R KQHRLYII
Sbjct: 181 VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ LIAYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA 290
>gi|282599769|ref|ZP_05971808.2| chemotaxis MotA protein [Providencia rustigianii DSM 4541]
gi|282567759|gb|EFB73294.1| chemotaxis MotA protein [Providencia rustigianii DSM 4541]
Length = 300
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 99/289 (34%), Positives = 158/289 (54%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+IG I +IGG+ +GG+ L QP E VI+ GAGLG FV+ N K I L
Sbjct: 7 LILIGYIIVTAAVIGGYVMVGGHLGALYQPAEFVIILGAGLGAFVVGNSGKSIVALCKVL 66
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F A + D++ LL+ L+ ++ E I++P S IFT P +L++
Sbjct: 67 PRLFRRSAYNKAMSMDLMALLFQLLNKSRQQGLLALEKDIENPQESEIFTQYPRILKDPT 126
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI DY+R+++ N +S+EIE LMDEE++ E P ++ +GES+PA GIV A+
Sbjct: 127 AMMFIVDYLRLMVTSNLQSHEIEALMDEELETFRQENEVPATGLNMVGESMPAFGIVAAV 186
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ A+G + LG I ++ GT LGI+++Y PL S ++ +Q +L +
Sbjct: 187 LGVVNALGAADRPAGELGALIAHAMVGTFLGILVAYGFILPLASLVRQRSTEQLKLMECI 246
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
K ++ + G PQ+A+E+GRKVL +RPS + +V + + +
Sbjct: 247 KVTFLSSLQGYAPQIAVEFGRKVLFSVDRPSFIELEDKVREVKVGNRTT 295
>gi|226327781|ref|ZP_03803299.1| hypothetical protein PROPEN_01654 [Proteus penneri ATCC 35198]
gi|225203485|gb|EEG85839.1| hypothetical protein PROPEN_01654 [Proteus penneri ATCC 35198]
Length = 287
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 97/279 (34%), Positives = 163/279 (58%)
Query: 11 ILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKAL 70
+ +IGG+ +GG+ L QP E +I+ GAG+G F++ N + I + L ++
Sbjct: 1 MSAVIGGYLLVGGSLGALYQPAEFIIIFGAGIGAFIVGNNGRAIVSTMKILPKLLRSTNY 60
Query: 71 GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
+ Y D++ L++ L+ ++ E I++P S IF+ P ++++ + +FI DYM
Sbjct: 61 NKAMYMDLMALMFRLLSKARQNGMLALERDIENPQQSDIFSQYPRIMKDVYMLSFITDYM 120
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R+++ GN YEIE+LMDEEI E P +S MG+SLPA GIV A++G++ A+G
Sbjct: 121 RLMVTGNMNPYEIESLMDEEIATFEEESEVPATGLSAMGDSLPAFGIVAAVMGVVNALGA 180
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ +G IG ++ GT LGI+L+Y +PL S+++ +Q ++ +K L++ MN
Sbjct: 181 ADRPAGEMGVLIGHAMVGTFLGILLAYGFISPLASRLRQRSSQQMKMMECIKTTLLSSMN 240
Query: 251 GAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
G PQ+A+E+GRK L L++RPS + + V Q +A
Sbjct: 241 GYAPQIAVEFGRKTLFLADRPSFIELEEHVRQVRTPMQA 279
>gi|114320661|ref|YP_742344.1| putative chemotaxis (motility protein A) transmembrane
[Alkalilimnicola ehrlichii MLHE-1]
gi|114227055|gb|ABI56854.1| putative chemotaxis (motility protein A) transmembrane
[Alkalilimnicola ehrlichii MLHE-1]
Length = 285
Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats.
Identities = 99/285 (34%), Positives = 168/285 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ I ++ + G+ A GGN +L QPFE++I+ GA G F++ANP+KV+K +
Sbjct: 1 MKLILGVIIVLVSVAVGYTAHGGNLAVLWQPFEVLIIFGAAGGAFLIANPMKVVKQVAGN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ I + Y D+L LLY + ++ E +D+P+ S +F P+VL ++
Sbjct: 61 VPRIMKGPPYRKQHYMDLLALLYEVFQKTQRDGLLSIEADVDNPHESELFRKYPSVLNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+CDY+R+++ GN +E+ENLMD E++ E P HA++ + ++LP GI+ A
Sbjct: 121 EALHFLCDYLRLMVGGNMNPFELENLMDVELETHHQEAELPAHAVNRVADALPGFGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ AMG + + +G+ + +L GT +GI+ YSL PL ++ ++ + +
Sbjct: 181 LLGIVIAMGEIDGPVQQIGSLVAAALIGTFIGILAGYSLVGPLGIAMEHRAREKAKYLEV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A +NG P VA+E+GRK + +ERPS E + V +N
Sbjct: 241 IKVTIMAVLNGYKPVVAVEFGRKAMYEAERPSFEELENHVKGHNA 285
>gi|220934495|ref|YP_002513394.1| putative chemotaxis (motility protein A) transmembrane
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995805|gb|ACL72407.1| putative chemotaxis (motility protein A) transmembrane
[Thioalkalivibrio sp. HL-EbGR7]
Length = 285
Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats.
Identities = 96/285 (33%), Positives = 163/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ I+G I + ++GGF A GG + QPFE+VI+ GA LG F+++N +K I
Sbjct: 1 MNLILGAIIVTVSVLGGFMAHGGKLLAIWQPFEVVIICGAALGAFIISNSMKTIMKVFKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + G + Y D+L LLY L +K E I++P S IF P++L+++
Sbjct: 61 IPGLLGGPKYKKTHYLDLLALLYDLFTKARKEGLMGIEPDIEEPQESAIFQKYPSILKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DYMR+++ G+ +E++NLMD E++ +E +P HA+ + ++LPA GIV A
Sbjct: 121 HVVEFISDYMRLVVSGSMNPFELDNLMDIELETHHHEVGEPAHAVQRVADALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M +L + +G + +L GT LGI+L+Y P+++ ++ + + Y
Sbjct: 181 VLGIVNTMDSLGGPIEEIGGKVAAALVGTFLGILLAYGFVGPMSTALERRAEDEAKFYAC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K ++A + G PQVA+E+GRK + + RPS + + Q +
Sbjct: 241 LKACILANVQGYSPQVAVEFGRKTMASTLRPSFQELEQHLRGTKE 285
>gi|319406969|emb|CBI80606.1| Chemotaxis protein motA [Bartonella sp. 1-1C]
Length = 291
Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats.
Identities = 132/290 (45%), Positives = 200/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I CI+GG+ AMGG+ +L+QP+E VI+ G+ +G F+++NP+ IKD+ +
Sbjct: 1 MGVIIGLIIIFGCILGGYVAMGGHLDVLVQPWEFVIILGSAIGTFIVSNPIPAIKDTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E Q + +L LLY+LM ++ S++E E H+D+P S +F P +L++
Sbjct: 61 TIEAMKDAVPKQKDFLSLLGLLYVLMREMRSKSKSEMEAHVDNPKESALFQQYPLILKDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY R+I++GN R +EIE LMDEEI I Y+ KPY A+ +M ++LPA+GIV A
Sbjct: 121 SLTNFICDYCRLIVMGNTRHFEIEALMDEEIHTISYDSQKPYQAMQNMADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG +S+ P++LG IG +L GT GI +Y + PL S+IK+ R K+ R+YI+
Sbjct: 181 VLGVVKAMGAISEPPEVLGHLIGAALVGTFAGIFFAYGIFGPLASKIKTVRNKKARIYIV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNGA+PQ+A+EYGRK + +RP+I+I+ Q + ++K +
Sbjct: 241 VKQTLLAYMNGAMPQIALEYGRKTISAKDRPTIDIMEQHAIASQGSEKEA 290
>gi|284007194|emb|CBA72483.1| flagellar motor protein MotA [Arsenophonus nasoniae]
Length = 289
Score = 307 bits (788), Expect = 8e-82, Method: Composition-based stats.
Identities = 96/278 (34%), Positives = 160/278 (57%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ I ++GG+ +GG+ L QP E +I+ GAGLGGF++AN K IK + L +
Sbjct: 1 MVIGAVLGGYLLVGGHLSALYQPAEFLIIFGAGLGGFIVANNGKAIKSTLRVLPRLLTSS 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ Y D++ L + L+ ++ E I+DP S IF+ P +L + L +F+ D
Sbjct: 61 RYNKSIYMDLMALQFRLLTKSRQAGVLSLERDIEDPEQSDIFSQYPKLLSDPHLMSFLTD 120
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
YMR++I GN ++EIE LMDEEI +E P ++S +G+SLPA GIV A++G++ A+
Sbjct: 121 YMRLMITGNMNAHEIEALMDEEIATFEHEAEVPAVSLSMLGDSLPAFGIVAAVMGVVHAL 180
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ + +G IG ++ GT LGI+L+Y +PL + ++ +Q ++ +K L++
Sbjct: 181 ASADRPAGEMGILIGNAMVGTFLGILLAYGFISPLANLVRQKSHQQIKMMECIKVTLLSS 240
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
++G PQ+A+E+GRK L L +RP + V +
Sbjct: 241 ISGYAPQIAVEFGRKTLFLDDRPFFNELEDHVRSMKNP 278
>gi|291326362|ref|ZP_06124226.2| chemotaxis MotA protein [Providencia rettgeri DSM 1131]
gi|291314724|gb|EFE55177.1| chemotaxis MotA protein [Providencia rettgeri DSM 1131]
Length = 300
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 96/288 (33%), Positives = 162/288 (56%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+IG I + +IGG+ +GG+ L QP E VI+ GAGLG FV+ N K I L
Sbjct: 7 LILIGYIIVTVAVIGGYIMVGGHLGALYQPAEFVIILGAGLGAFVVGNSGKSIVALCKVL 66
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++F + + D++ LL+ L+ ++ E ID+P S IF+ P +L++
Sbjct: 67 PKLFRRSSYNKTMSMDLMALLFQLLNKSRQQGLLALEKDIDNPSESEIFSQYPRILKDES 126
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI DY+R+++ N +S+EIE LMDEE++ E P ++ +G+S+PA GIV A+
Sbjct: 127 TMMFIVDYLRLMVSSNLQSHEIEALMDEELETFRQENEVPASGLNMVGDSMPAFGIVAAV 186
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ A+G+ + LG I ++ GT LGI+++Y PL + I+ +Q ++ +
Sbjct: 187 LGVVNALGSADRPAGELGALIAHAMVGTFLGILVAYGFILPLAALIRLRSSEQLKMMECI 246
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
K ++ + G PQ+A+E+GRKVL ++RPS + +V + ++
Sbjct: 247 KVTFLSALQGYAPQIAVEFGRKVLFSADRPSFVELEDKVREVKVGARS 294
>gi|311279212|ref|YP_003941443.1| flagellar motor protein MotA [Enterobacter cloacae SCF1]
gi|308748407|gb|ADO48159.1| flagellar motor protein MotA [Enterobacter cloacae SCF1]
Length = 296
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 101/286 (35%), Positives = 165/286 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYALTGGHLGALYQPAELIIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 LPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPTESEIFASYPRILADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G+ + LG+ I ++ GT LGI+L+Y +PL + ++ + ++
Sbjct: 181 VMGVVHALGSADRPAAELGSLIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
VK L++ +NG P +A+E+GRK L SERPS + + V +
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNP 286
>gi|221069303|ref|ZP_03545408.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|264676589|ref|YP_003276495.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|220714326|gb|EED69694.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|262207101|gb|ACY31199.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
Length = 286
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 96/286 (33%), Positives = 159/286 (55%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG + CI G + GG+ +L++ PFE+V + G LG F+++N KV+K +
Sbjct: 1 MLVLIGYIVAFGCIFGMYVLHGGSVGVLVKALPFEMVTIGGGALGAFIVSNQPKVLKATA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + Y +V+ LLY L+ +K E+ ++DP +ST+F + P ++
Sbjct: 61 KAIPSALKPSRYNKARYMEVMALLYELLQKARKEGLMSIESDVEDPQSSTVFQNYPQLMA 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN S+EIE LMD EI+ E P A++ + +LPA GI+
Sbjct: 121 DHHVVEFLTDYLRMMVSGNLNSHEIEALMDSEIEAHHAEAHAPVMALNRLAGALPAFGII 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ M + Q P +LG I +L GT LGI+L+Y+L P+ + ++ + +
Sbjct: 181 AAVLGVVNTMAFVGQPPAVLGGMIASALVGTFLGILLAYALVEPMAALLEQRAQDAAKEF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P AIE+GRKVL +ERP + V
Sbjct: 241 ECIKATLLASMQGYNPGTAIEFGRKVLFSTERPGFLELESHVKGKK 286
>gi|160896053|ref|YP_001561635.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160361637|gb|ABX33250.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 286
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 95/286 (33%), Positives = 158/286 (55%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + CI G + GGN ++++ PFE+V + G +G F++ N KV+K +
Sbjct: 1 MLVIIGYIVAFGCIFGTYVLHGGNVQVILKALPFEMVTIGGGAIGAFIVCNQPKVLKATA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + + + +++ LLY ++ +K E+ ++ P S IFT P +L
Sbjct: 61 KAIPGVMKSSRYTKARFMELMALLYEILQKARKEGLMSIESDVEAPNESPIFTKYPELLA 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN S+EIE+LMD EI+ E P +A++ + +LPA GI+
Sbjct: 121 DHHVVEFLTDYLRMMVSGNLNSHEIESLMDSEIEAHHAEAHAPVNALTRLAGALPAFGII 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y+L P+ ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPSVLGGMIASALVGTFLGILLAYALVEPMAGLVEQRAQDAAKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P AIE+GRKVL +ERP + V
Sbjct: 241 ECIKTTLLASMQGYNPATAIEFGRKVLFSTERPGFLELETHVKGKK 286
>gi|288959637|ref|YP_003449978.1| chemotaxis protein [Azospirillum sp. B510]
gi|288911945|dbj|BAI73434.1| chemotaxis protein [Azospirillum sp. B510]
Length = 286
Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 90/280 (32%), Positives = 158/280 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG I I + GG+ GG+ +L PFE +I+ G+G G F +ANP V+ +G
Sbjct: 1 MFVMIGFGIVIFSVFGGYILGGGHLGVLWMPFEFMIILGSGAGAFFIANPKSVVTHTGKE 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F ++ + +VL ++Y + K E HI+ P +S +F P ++
Sbjct: 61 LGHLFKGPKYKKEDFLEVLTMMYQVFKIAKTKGLLALEQHIEKPEDSPLFQQFPKFYGDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+C Y+R++ +G +E+ +LMDE+I+ + +E + AI + +++PA+GIV A
Sbjct: 121 HAIAFLCTYLRLMSLGADNPHELVDLMDEDIETMHHEHQRISDAIQAVADAVPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I MG++++ P++LG IG +L GT GI+++Y P+ S +K+ + + Y
Sbjct: 181 VLGVIHTMGSITEPPEVLGKLIGGALVGTFTGILVAYGFLAPIASGLKNIYHAEGKYYQA 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+K LIA+++G P +++EY R VL RP+ V +
Sbjct: 241 MKTGLIAHLSGYAPAISVEYARNVLEPEYRPTFAQVEEAT 280
>gi|299531266|ref|ZP_07044676.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|298720673|gb|EFI61620.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 286
Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 96/286 (33%), Positives = 159/286 (55%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG + CI G + GG+ +L++ PFE+V + G LG F+++N KV+K +
Sbjct: 1 MLVLIGYIVAFGCIFGMYVLHGGSVGVLVKALPFEMVTIGGGALGAFIVSNQPKVLKATA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + Y +V+ LLY L+ +K E+ ++DP +ST+F + P ++
Sbjct: 61 KAIPSALRPSRYNKARYMEVMALLYELLQKARKEGLMSIESDVEDPQSSTVFQNYPQLMA 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN S+EIE LMD EI+ E P A++ + +LPA GI+
Sbjct: 121 DHHVVEFLTDYLRMMVSGNLNSHEIEALMDSEIEAHHAEAHAPVMALNRLAGALPAFGII 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ M + Q P +LG I +L GT LGI+L+Y+L P+ + ++ + +
Sbjct: 181 AAVLGVVNTMAFVGQPPAVLGGMIASALVGTFLGILLAYALVEPMAALLEQRAQDAAKEF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P AIE+GRKVL +ERP + V
Sbjct: 241 ECIKATLLASMQGYNPGTAIEFGRKVLFSTERPGFLELESHVKGKK 286
>gi|319764524|ref|YP_004128461.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330826740|ref|YP_004390043.1| flagellar motor stator protein MotA [Alicycliphilus denitrificans
K601]
gi|317119085|gb|ADV01574.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329312112|gb|AEB86527.1| flagellar motor stator protein MotA [Alicycliphilus denitrificans
K601]
Length = 286
Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 101/286 (35%), Positives = 156/286 (54%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G +T C+ G F A GGN ++++ PFE++ + GA G FV+ N KV+K +
Sbjct: 1 MFVILGYLVTFGCVFGVFIAHGGNIKVVLEALPFEMITIGGAAAGAFVVNNQPKVLKATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++ + Y ++L +LY ++ +K E ++ P +S IF PTV
Sbjct: 61 AMLPQVLKGNKYTKARYMELLAMLYEILQKARKEGLMAIEADVESPQDSEIFKKFPTVGT 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN ++EIE LMD EID E P A++ + +LPA GIV
Sbjct: 121 DHHVLEFTTDYLRMMVSGNLNAHEIEALMDSEIDTHHQEAHAPVAALTRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y L PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIASALVGTFLGILLAYGLVEPLAGLLEQKAEDAGKEF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P AIE+GRKVL +RPS + V
Sbjct: 241 ACIKSTLLASMQGYNPSTAIEFGRKVLFSGDRPSFSELESHVKGKK 286
>gi|52842528|ref|YP_096327.1| flagellar motor protein MotA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629639|gb|AAU28380.1| chemotaxis (motility protein A) transmembrane [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 301
Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 98/290 (33%), Positives = 164/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K S
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAMGSFIVGNNITVLKSVLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFT P ++ N+
Sbjct: 61 LPATFRGQKSAKQASNDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTGYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K ++A ++ P +A E+GRKVL S+RPS + E+ + +
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEIKNAKTAQTTT 290
>gi|304311520|ref|YP_003811118.1| Flagellar motor component [gamma proteobacterium HdN1]
gi|301797253|emb|CBL45473.1| Flagellar motor component [gamma proteobacterium HdN1]
Length = 284
Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 103/282 (36%), Positives = 163/282 (57%), Gaps = 1/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + + + GG+ G + QP+E++I+ GA G F++AN + VIK G
Sbjct: 1 MLKIIGIIVVLGSVAGGYVLSHGKLGAIWQPYELIIICGAAFGAFLIANGMPVIKGVGSG 60
Query: 61 LLEIFGYK-ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L +F K +D+Y ++L LLY + +K E I++P S IF V N
Sbjct: 61 LGAVFSGKLHWHKDSYMELLSLLYEVFNKARKSGLISIEEDIENPAGSEIFMRYHHVNSN 120
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+L FICDY+R+I GN + E+E+LMD+EI+ ++E +P HA++ + + LP GIV
Sbjct: 121 AKLVDFICDYLRIIASGNLSANELESLMDQEIETAMHEATEPAHAVNRVADGLPGFGIVA 180
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A+LGI+ MG+L P LG +G +L GT LGI+ +Y PL++ ++ + ++Y
Sbjct: 181 AVLGIVITMGSLGGPPDELGHHVGAALVGTFLGILFAYGFLAPLSNAMEHDAKESMKIYE 240
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
K ++A +NG PQ+A+E+GRKVLP ERP+ + +
Sbjct: 241 CAKVCMLAMVNGIPPQLAVEFGRKVLPGGERPTFSELDSALR 282
>gi|163793055|ref|ZP_02187031.1| motA, chemotaxis (motility protein A [alpha proteobacterium BAL199]
gi|159181701|gb|EDP66213.1| motA, chemotaxis (motility protein A [alpha proteobacterium BAL199]
Length = 286
Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats.
Identities = 99/282 (35%), Positives = 160/282 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + ++GG+ AMGG L QPFE+VI+ GAG+G F++ANP V+ +G
Sbjct: 1 MFVIIGWVVVTVSVLGGYMAMGGKLGPLWQPFELVIIGGAGVGAFIVANPKYVLSKAGYG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+D Y ++L LLY + K E HI+ P ST+F + P ++
Sbjct: 61 FKAALKGPKYSKDDYLELLSLLYAIFKLAKTKGMLAIEAHIERPEESTLFQAFPKFSADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CDY+RM+ +G +E+ +L+DEE++ E + A MG+ PA+GIV A
Sbjct: 121 HAMDFLCDYLRMMTLGTNNPHELADLLDEELETHHAEDAQIQSAYQTMGDGFPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGIIK M ++++ P++LG IG +L GT LGI+L+Y +PL++ + + +
Sbjct: 181 VLGIIKTMSSITEPPEVLGKLIGGALVGTFLGILLAYGFVSPLSATMGAVFAADAKYLGC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
++ L+A+++G P V++E+ RK L +RPS V + V
Sbjct: 241 IRAGLLAHVSGYAPAVSVEFARKALMSKDRPSFFEVEEAVAA 282
>gi|154253327|ref|YP_001414151.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
gi|154157277|gb|ABS64494.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
Length = 312
Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats.
Identities = 100/287 (34%), Positives = 159/287 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ + +L + GG+ AMGG+ +L QPFE VI+ GA G F +ANP V+K G
Sbjct: 26 MRLIVGIAVVLLSVFGGYAAMGGHLEVLWQPFEAVIILGAAFGAFCIANPPSVLKAVGGI 85
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + ++L L Y L K E H+++P STIF P ++
Sbjct: 86 FGTLFKGPRYDKAAFLELLGLQYTLFKLAKSKGNLALEAHVENPGESTIFAQFPKFSADH 145
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CDY+RMI +G ++E+E+LMDEE++ E+ + A+ + + PA+GIV A
Sbjct: 146 HAVEFMCDYLRMITLGTENAHELESLMDEELETHHQERERIVSAMQALADGTPALGIVAA 205
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IK MG++ Q P +LG IG +L GT LG+ ++Y P+ +++T + + ++
Sbjct: 206 VLGVIKTMGSIDQPPSVLGGLIGGALVGTFLGVFVAYGFFGPMAQSLRNTYEAESKYFLS 265
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+K L+A+M G P V+IE+ RK L RP+ V Q
Sbjct: 266 MKAGLLAHMAGYAPAVSIEFARKALMSEVRPTFIEVEQSTAALQPAA 312
>gi|157145318|ref|YP_001452637.1| flagellar motor protein MotA [Citrobacter koseri ATCC BAA-895]
gi|157082523|gb|ABV12201.1| hypothetical protein CKO_01058 [Citrobacter koseri ATCC BAA-895]
Length = 278
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 99/270 (36%), Positives = 153/270 (56%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG+ L QP E VI+ GAG+G F++ N K IK + +L +F + Y D+
Sbjct: 1 MMTGGHLGALYQPAEFVIIGGAGIGAFIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDL 60
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
L LLY LM ++ E I++P S IF S P +L + + FI DY+R+II GN
Sbjct: 61 LALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAVMLDFIVDYLRLIISGNM 120
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++EIE LMDEEI+ E P ++++ MG+SLPA GIV A++G++ A+ + + L
Sbjct: 121 NTFEIEALMDEEIETHESEAEVPANSLALMGDSLPAFGIVAAVMGVVHALASADRPAAEL 180
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I ++ GT LGI+L+Y +PL S ++ + ++ VK L++ +NG P +A+
Sbjct: 181 GALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAV 240
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
E+GRK L SERPS + + V + +
Sbjct: 241 EFGRKTLYSSERPSFIELEEHVRAVRNPNQ 270
>gi|146312114|ref|YP_001177188.1| flagellar motor protein MotA [Enterobacter sp. 638]
gi|145318990|gb|ABP61137.1| proton conductor component of motor, torque generator [Enterobacter
sp. 638]
Length = 295
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 101/290 (34%), Positives = 165/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 1 MLIVLGYLVVLGTVFGGYMMTGGHLGALYQPAELIIIGGAGIGAFIVGNNGKSIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 LPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P A++ +G+SLPA GIV A
Sbjct: 121 MMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEVPAAALAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + + LG I ++ GT +GI+L+Y +PL+S ++ + ++
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGTFVGILLAYGFISPLSSVLRQKSAETTKMMQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L++ +NG P +A+E+GRK L SERPS + + V + + +
Sbjct: 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPNQQT 290
>gi|295095517|emb|CBK84607.1| Flagellar motor component [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 277
Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 97/272 (35%), Positives = 155/272 (56%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG+ L QP E+VI+ GAG+G F++ N K IK + ++ +F + Y D+
Sbjct: 1 MMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDL 60
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
L LLY LM ++ E I++P S IF S P +L + + FI DY+R+II GN
Sbjct: 61 LALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNM 120
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+ + + L
Sbjct: 121 NTFEIEALMDEEIETHESESEVPANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAEL 180
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I ++ GT LGI+L+Y +PL S ++ + ++ VK L++ +NG P +A+
Sbjct: 181 GALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAV 240
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
E+GRK L SERPS + + V + + +
Sbjct: 241 EFGRKTLYSSERPSFIELEEHVRAVKNPNQQT 272
>gi|297538878|ref|YP_003674647.1| flagellar motor protein MotA [Methylotenera sp. 301]
gi|297258225|gb|ADI30070.1| flagellar motor protein MotA [Methylotenera sp. 301]
Length = 286
Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 100/285 (35%), Positives = 165/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + + I GG+ GG+ L QP E++++ G LG FV+ N +K +K +G S
Sbjct: 1 MFVIIGYVVILGTIFGGYALGGGHLGGLWQPLELLMIFGGALGAFVVGNDIKALKATGKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L +L+ ++ ++K EN +++P S +F+ P +L ++
Sbjct: 61 LPTLFKGSKYNKALYMDLLAMLFEILAKIRKDGMMSIENDVENPEASPLFSKYPKLLHDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R++ GN +++IE LM+ EI+ E P H I+ +G++LPA GIV A
Sbjct: 121 HLIEFITDYLRLMGSGNMDAFQIETLMESEIETHHMEGHVPAHCIAKLGDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG+L + P LG IG +L GT LGI+L+Y PL+ ++ + ++Y
Sbjct: 181 VMGVVHTMGSLDKPPPELGEMIGHALVGTFLGILLAYGFVGPLSGLLEQKLEESTKMYNA 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK LI+ +NG P +A+E+GRK+L +ERP + + Q
Sbjct: 241 VKVTLISSLNGYAPAIAVEFGRKILYSTERPGFAELEAHIKQAKG 285
>gi|187478166|ref|YP_786190.1| flagellar motor protein MotA [Bordetella avium 197N]
gi|115422752|emb|CAJ49280.1| chemotaxis protein [Bordetella avium 197N]
Length = 291
Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 106/287 (36%), Positives = 169/287 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I+ ++G F +GG+ L QPFE+ ++AGA LG F+ N K + +
Sbjct: 1 MLVVIGYAVVIVAVVGSFIGLGGHLGALYQPFELTLIAGAALGAFLAGNSRKSLVLVRQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +D Y +++ LLY+L+ ++ E+HI+DP +S IF P ++++
Sbjct: 61 IPRAFKSAPYSKDLYMELMALLYVLLNKARREGLMAIESHIEDPSSSPIFNEYPRIMKDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E P HA+ + + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETFRHEHEVPTHALQQVADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P +LG I ++ GT LG++L+Y PL S+++ + ++
Sbjct: 181 VLGVIKALAAVDQPPAVLGDLISKAMVGTFLGVLLAYGFVAPLASRVERRTTESVKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+K L+A MNG PQ+A+E+GRKVL + RPS + + V Q
Sbjct: 241 IKVTLLASMNGYPPQLAVEFGRKVLFSAVRPSFGELEEHVRQAKTTA 287
>gi|212709469|ref|ZP_03317597.1| hypothetical protein PROVALCAL_00511 [Providencia alcalifaciens DSM
30120]
gi|212687807|gb|EEB47335.1| hypothetical protein PROVALCAL_00511 [Providencia alcalifaciens DSM
30120]
Length = 300
Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats.
Identities = 96/289 (33%), Positives = 157/289 (54%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+IG I +IGG+ +GG+ L QP E VI+ GAGLG FV+ N K I L
Sbjct: 7 LILIGYIIVTAAVIGGYVMVGGHLGALYQPAEFVIILGAGLGAFVVGNSGKAIVALCKVL 66
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + D++ LL+ L+ ++ E I++P S IF P +L++
Sbjct: 67 PGLFRRSSYNKAMSMDLMALLFQLLNKSRQQGLLALEKDIENPQESEIFALYPRILKDKT 126
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI DY+R+++ N +++EIE LMDEE++ E P ++ +GES+PA GIV A+
Sbjct: 127 AMMFIVDYLRLMVTSNLQAHEIEALMDEELETFRQENEVPASGLNMVGESMPAFGIVAAV 186
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ A+ + LG I ++ GT LGI+++Y PL S I+ +Q ++ +
Sbjct: 187 LGVVNALAAADRPAGELGALIAHAMVGTFLGILVAYGFILPLASLIRQRSSEQLKMMECI 246
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
K ++ + G PQ+A+E+GRKVL +RPS + +V + +A+
Sbjct: 247 KVTFLSSLQGYAPQIAVEFGRKVLFSVDRPSFMELEDKVREVKIGNRAT 295
>gi|288549779|ref|ZP_05968140.2| chemotaxis MotA protein [Enterobacter cancerogenus ATCC 35316]
gi|288317371|gb|EFC56309.1| chemotaxis MotA protein [Enterobacter cancerogenus ATCC 35316]
Length = 277
Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats.
Identities = 96/272 (35%), Positives = 155/272 (56%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG+ L QP E++I+ GAG+G F++ N K IK + ++ +F + Y D+
Sbjct: 1 MMTGGHLGALYQPAELIIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDL 60
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
L LLY LM ++ E I++P S IF S P +L + + FI DY+R+II GN
Sbjct: 61 LALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNM 120
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+ + + L
Sbjct: 121 NTFEIEALMDEEIETHESESEVPANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAEL 180
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I ++ GT LGI+L+Y +PL S ++ + ++ VK L++ +NG P +A+
Sbjct: 181 GALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAV 240
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
E+GRK L SERPS + + V + + +
Sbjct: 241 EFGRKTLYSSERPSFIELEEHVRAVKNPNQQT 272
>gi|192360488|ref|YP_001981666.1| chemotaxis motA protein [Cellvibrio japonicus Ueda107]
gi|190686653|gb|ACE84331.1| chemotaxis motA protein [Cellvibrio japonicus Ueda107]
Length = 285
Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats.
Identities = 101/288 (35%), Positives = 163/288 (56%), Gaps = 3/288 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ I+G+ + + C+IGGF GGN L+ P EI+I+ GA G ++ NPL V + S
Sbjct: 1 MNIILGIIVVLGCVIGGFVIHGGNALALMSPIEIMIICGASFGAMIIGNPLSVTINVVKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y D+L LLY ++ ++ E I++P +S IF + P +L+++
Sbjct: 61 AGALMTPSKYNKIFYLDMLTLLYDILNKTRREGLMAIEGDIEEPESSPIFANYPEILKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FICDY+R+++ GN +E+E+LM++E++ E AI + + LP GIV A
Sbjct: 121 HIVEFICDYLRIMVAGNMAPHELESLMEQELEGHHQEASIVPGAIQNAADGLPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG + P +G ++ +L GTLLGI+ +Y P +S + + R +
Sbjct: 181 VLGVVITMGKIGGPPSEIGASVAAALVGTLLGILFAYGFIGPFSSYLNHKVRDESRAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+K L+A MNG PQVA+E+GRKVL S RPS + + QY +KK
Sbjct: 241 IKAVLVASMNGVPPQVAVEFGRKVLFHSVRPSFSELEE---QYRASKK 285
>gi|92114148|ref|YP_574076.1| chemotaxis MotA protein [Chromohalobacter salexigens DSM 3043]
gi|91797238|gb|ABE59377.1| chemotaxis MotA protein [Chromohalobacter salexigens DSM 3043]
Length = 293
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 93/290 (32%), Positives = 160/290 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I I GG+ +GG+ L QP EI+++ GA +G F+ AN K IK + +
Sbjct: 1 MLILLGYLVVIASIGGGYTLVGGHFGALFQPSEILMIVGAAVGAFIAANNGKSIKATLRT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ + Y +++ L Y L+ ++ E ID P +S IF+ P + +
Sbjct: 61 FSKLKRTTKYNKTMYMELMALQYRLLTKARRDGMLAIERDIDAPEDSAIFSDYPKIANDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+++ GN +EI+ LM+ EID +E P HA+ +G+ LPA GIV A
Sbjct: 121 LIMAFITDYLRLMVSGNMDPFEIDTLMEHEIDTFQHEAEIPAHALHSVGDGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+G Q +G I +L GT LGI+L+Y P++ +++ + ++
Sbjct: 181 VMGVVHALGAADQGAAAMGQMIAQALVGTFLGILLAYGFVLPVSQRLQLQVTEAIKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V+ L+A +NG PQ+A+E+GRK L +ERPS + + V + + +
Sbjct: 241 VRVTLMASLNGMAPQLAVEFGRKALFTAERPSFTELEEHVRSEGSSTRGT 290
>gi|56695126|ref|YP_165473.1| flagellar motor protein MotA [Ruegeria pomeroyi DSS-3]
gi|56676863|gb|AAV93529.1| chemotaxis protein MotA [Ruegeria pomeroyi DSS-3]
Length = 289
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 87/289 (30%), Positives = 165/289 (57%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ A GG I+++ PFE++++ GA G F+++N + +K +
Sbjct: 1 MIGILGIVVIFVMVFGGYLAAGGKMTIILKSLPFEMMMIGGAATGAFLISNDMGGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + Y D+L LL+ L+ ++ + E E HI+DP +S +F+ P +
Sbjct: 61 KDVGKVFKGPKWKPEDYRDLLCLLFSLIRIARQ-NPVEVEQHIEDPASSALFSKYPRIQA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD MR + +++E ++++ ++ L+ + HA+ + + LPA+GIV
Sbjct: 120 DHEAVDLICDTMRSASMNYDDPHQVEEVLEKRMEANLHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y L P S++K+ + + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGRLIGGALVGTFLGVFLAYGLVGPFASKVKAVVEEDNHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+++K+ L+A ++ P + IE GR+ P RP + Q + +
Sbjct: 240 LLIKEVLVANLHNHNPAMCIEVGRQNTPSHIRPGFTDLEQALKDLKQDA 288
>gi|54295158|ref|YP_127573.1| flagellar motor protein MotA [Legionella pneumophila str. Lens]
gi|53754990|emb|CAH16478.1| hypothetical protein lpl2238 [Legionella pneumophila str. Lens]
Length = 301
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 98/290 (33%), Positives = 165/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K S
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAIGSFIVGNNITVLKSVLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFT+ P ++ N+
Sbjct: 61 LPATFRGQKSAKQASSDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTNYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K ++A ++ P +A E+GRKVL S+RPS + E+ + +
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEIKNAKTAQTTT 290
>gi|222147564|ref|YP_002548521.1| flagellar motor protein MotA [Agrobacterium vitis S4]
gi|221734552|gb|ACM35515.1| chemotaxis transmembrane protein [Agrobacterium vitis S4]
Length = 291
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 176/290 (60%), Positives = 230/290 (79%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG IT+ CI+GGF AMGG+ +LIQPFE++I+ GAGLGGFVMANP+K++KDSG +
Sbjct: 1 MNIIIGFVITVGCILGGFMAMGGHLNVLIQPFELLIIGGAGLGGFVMANPMKIVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y DVL +LY LM +L+ SRNE E HID+P S+IF + P +L+N
Sbjct: 61 LGEAFKHAVPKERAYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQTAPNLLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT+FICDY+R+II+GNARS+EIE LMDEEI+ IL++K+KPYHAI+ MG+S PAIGIV A
Sbjct: 121 ELTSFICDYVRLIIIGNARSHEIEALMDEEINTILHDKMKPYHAITAMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++SP++LG IG +L GT+LGI LSYS+CNPLTSQIK R KQHRLYII
Sbjct: 181 VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIFLSYSVCNPLTSQIKIVRTKQHRLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ + +
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISSYERPSIDAVEQEMMNPGGGNEKA 290
>gi|328545469|ref|YP_004305578.1| Chemotaxis transmembrane protein [polymorphum gilvum SL003B-26A1]
gi|326415210|gb|ADZ72273.1| Chemotaxis transmembrane protein [Polymorphum gilvum SL003B-26A1]
Length = 300
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 143/286 (50%), Positives = 196/286 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ I+GL I + +IGGF A+GG +L QP+E+VI+ G LG F +ANP+K I D+ S
Sbjct: 1 MTIILGLIIAAVSLIGGFAALGGKVAVLWQPWELVIIIGVALGTFFVANPMKAIVDTLRS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
E + Y DVL LLY LM L+ RNE E HI++P S IF S PTV N+
Sbjct: 61 TREAVFNAVPKKRDYLDVLALLYALMRELRAKGRNEVEPHIENPQESEIFRSFPTVYRNS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TF+CDY R+I+VGNAR++EIE LMDEE+ I ++LKPY+A+S + E+LPAIGIV A
Sbjct: 121 GLLTFVCDYFRLILVGNARAHEIEALMDEELQTIHRDQLKPYYALSALAEALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG + QSP+ILG+ IG +L GT +GI LSY+L P+ ++K R + R YII
Sbjct: 181 VLGVIKAMGAIDQSPQILGSLIGAALVGTFVGIFLSYALVAPVAHKVKGVREHRLRPYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
VK++L+A+MNGA PQ+A+E+GRK + +RP+I+ V E +
Sbjct: 241 VKQSLLAFMNGAPPQIALEHGRKTISAYDRPTIDEVENETMNSGGG 286
>gi|307611159|emb|CBX00803.1| hypothetical protein LPW_25071 [Legionella pneumophila 130b]
Length = 301
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 99/290 (34%), Positives = 165/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K S
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAIGSFIVGNNITVLKSVLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFTS P ++ N+
Sbjct: 61 LPATFRGQKSAKQASSDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTSYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K ++A ++ P +A E+GRKVL S+RPS + E+ + +
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEIKNAKTAQTTT 290
>gi|148359857|ref|YP_001251064.1| chemotaxis motility protein A [Legionella pneumophila str. Corby]
gi|296107907|ref|YP_003619608.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
gi|148281630|gb|ABQ55718.1| chemotaxis (motility protein A) transmembrane [Legionella
pneumophila str. Corby]
gi|295649809|gb|ADG25656.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
Length = 301
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 99/290 (34%), Positives = 165/290 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K S
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAIGSFIVGNNITVLKSVLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFTS P ++ N+
Sbjct: 61 LPATFRGQKSAKQASSDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTSYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K ++A ++ P +A E+GRKVL S+RPS + E+ + +
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEIKNAKTAQTTT 290
>gi|254473335|ref|ZP_05086732.1| chemotaxis MotA protein [Pseudovibrio sp. JE062]
gi|211957451|gb|EEA92654.1| chemotaxis MotA protein [Pseudovibrio sp. JE062]
Length = 294
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 140/290 (48%), Positives = 193/290 (66%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ ++GL I I IIGG+ AMGG +L QPFE++IV GA G FV+AN K IKD+G
Sbjct: 1 MNILVGLVIVIGSIIGGYVAMGGYMKVLWQPFELLIVGGAAFGTFVVANTFKTIKDTGRG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E + + D L +LY LM L+ RN+ E ID+P S +F P VL N
Sbjct: 61 IHEALMNAKPKKRDHLDTLSVLYGLMRTLRAKGRNDVEQIIDNPAESELFQRFPRVLANV 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT+FICDY R+II+GN R +EIE LMDEE+ + E++KPY A+S E+LPA+GIV A
Sbjct: 121 SLTSFICDYFRLIIIGNVRPHEIEALMDEELHTLGREEMKPYQALSIAAETLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+KAMG + Q P+ILG+ IG +L GT LGI LSY + +P+ +IKS R +++RLYI
Sbjct: 181 VLGIVKAMGAIDQEPEILGSLIGAALVGTFLGIFLSYGIVSPIAVKIKSIREQRYRLYIE 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+A+MNGA PQ+A+E+GRK + +RP+I+ V E + A+
Sbjct: 241 VKQTLLAFMNGAAPQIALEHGRKTIGADDRPTIDEVEAETMNAGPVTSAA 290
>gi|54298208|ref|YP_124577.1| flagellar motor protein MotA [Legionella pneumophila str. Paris]
gi|53751993|emb|CAH13419.1| hypothetical protein lpp2266 [Legionella pneumophila str. Paris]
Length = 301
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 98/287 (34%), Positives = 164/287 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + +LC+ GGF GG+ + QP E++I+ GA +G F++ N + V+K +
Sbjct: 1 MLIIVGYIVILLCVFGGFSLTGGHLAAIFQPVELLIIGGAAIGSFIVGNNITVLKSVLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D+L LLY L+ ++ EN ID+P S IFTS P ++ N+
Sbjct: 61 LPATFRGQKSAKQASSDLLSLLYHLLSKARQQGLMSLENDIDEPDKSPIFTSYPNLMSNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II N + +++E+LMD EI+ E++ P +AI+ + +++PA GIV A
Sbjct: 121 HLIEFICDYLRLIITSNMQPFQLESLMDMEIESHHEEEMIPANAITKLADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPSELGVLIAHALVGTFLGILIGYGFVGPIATAMEQNANQNQLMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+K ++A ++ P +A E+GRKVL S+RPS + E+ +
Sbjct: 241 IKVTILASLHNNPPIIATEFGRKVLFTSQRPSFNQLNDEIKNAKTAQ 287
>gi|238782804|ref|ZP_04626833.1| hypothetical protein yberc0001_34320 [Yersinia bercovieri ATCC
43970]
gi|238716227|gb|EEQ08210.1| hypothetical protein yberc0001_34320 [Yersinia bercovieri ATCC
43970]
Length = 298
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 101/283 (35%), Positives = 165/283 (58%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
IIG + IL + GGF GG L QP E++I+ GAG+G F++ N K IK + +
Sbjct: 4 LVIIGYLVVILTVFGGFSLAGGELAALYQPTELLIIGGAGVGAFIVGNNGKSIKATFKAF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + + Y D+L +LY+L+ ++ E+ I+DP NS IF++ P +L +
Sbjct: 64 PHLLKGSSYTKVLYMDLLAMLYLLLTKSRQNGIMTLESDIEDPQNSAIFSAYPRLLADPM 123
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L TFI DY+RM++ G+ S+EIE LMDEEI+ +E P H+++ +G++LPA GIV A+
Sbjct: 124 LMTFIIDYLRMMVSGSMNSFEIEALMDEEIETCEHEHEVPAHSLNAVGDALPAFGIVAAV 183
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+ + LG I ++ GT LGI+L+Y PL S ++ ++ ++ +
Sbjct: 184 MGVVNALAAADRPAAELGELIAHAMVGTFLGILLAYGFVLPLASLLRQKSSEEIKMLQCI 243
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+ L++ MNG PQ+A+E+GRK L ERP+ + V +
Sbjct: 244 RVTLLSSMNGYAPQIAVEFGRKTLFSPERPTFLELEDHVREAK 286
>gi|121596102|ref|YP_987998.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|120608182|gb|ABM43922.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
Length = 286
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 98/286 (34%), Positives = 154/286 (53%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI--QPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M ++G IT C+ G F A GGN +L+ PFE++ + GA LG F++ N KV+K +
Sbjct: 1 MLVLLGYIITFGCVFGVFVAHGGNVQVLLTALPFEMITIGGAALGSFIVTNQPKVLKATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L ++F + Y +++ +LY ++ +K E ++ P S +F PTV
Sbjct: 61 ATLPQVFKGNKYTKARYMELMAMLYEILQKARKEGLMSIEQDVESPKESELFKKFPTVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ + F DY+RM++ GN ++EIE LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DPHVVEFTTDYLRMMVSGNLNAHEIEALMDSEIETHHAEAHAPVAALTRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y PL ++ + Y
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIASALVGTFLGILLAYGAVEPLAGLLEQKAADAAKEY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P +IE+GRKVL +RP + V
Sbjct: 241 ECIKSTLLASMQGYNPATSIEFGRKVLFSGDRPGFAELEAHVKGKK 286
>gi|260432133|ref|ZP_05786104.1| lateral flagellar motor protein MotA [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415961|gb|EEX09220.1| lateral flagellar motor protein MotA [Silicibacter lacuscaerulensis
ITI-1157]
Length = 289
Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 161/289 (55%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ A GG I+++ PFE++++ GA +G F+++N + +K +
Sbjct: 1 MIGILGIVVIFVMVFGGYLAAGGKMAIILKSLPFEMMMIGGAAVGAFLISNDMPAVKHTV 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F D Y D+L LL+ L+ + + E E HI+DP +S++F + P +
Sbjct: 61 KDLGKVFKGPKWKPDDYRDLLCLLFALIRMARS-NPVEVEGHIEDPASSSLFAAYPKIQA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ ++ + + HA+ + + LPA+GIV
Sbjct: 120 DKEAVDLICDTMRSAAMNYDDPHQVEEVLEKRMEANFHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y L P ++K+ + + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAGKLKAVVEEDNHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++K+ L+A ++ P + IE GR+ P RP + + +
Sbjct: 240 QLIKEVLVANLHQHNPAMCIEVGRQNTPTHNRPGFTELEEALKGIKQAA 288
>gi|222112257|ref|YP_002554521.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|221731701|gb|ACM34521.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 286
Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats.
Identities = 99/286 (34%), Positives = 154/286 (53%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI--QPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G IT C+ G F A GGN +L+ PFE++ + GA LG F++ N KV+K +
Sbjct: 1 MLVILGYIITFGCVFGVFVAHGGNVQVLLTALPFEMITIGGAALGSFIVTNQPKVLKATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L ++F + Y +++ +LY ++ +K E ++ P S +F PTV
Sbjct: 61 ATLPQVFKGNKYTKARYMELMAMLYEILQKARKEGLMSIEQDVESPKESELFKKFPTVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ + F DY+RM++ GN ++EIE LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DPHVIEFTTDYLRMMVSGNLNAHEIEALMDSEIETHHAEAHAPVAALTRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG I +L GT LGI+L+Y PL ++ + Y
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIASALVGTFLGILLAYGAVEPLAGLLEQKAADAAKEY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P +IE+GRKVL +RP + V
Sbjct: 241 ECIKSTLLASMQGYNPATSIEFGRKVLFSGDRPGFVELEAHVKGKK 286
>gi|197362084|ref|YP_002141721.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|205352374|ref|YP_002226175.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856556|ref|YP_002243207.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|197093561|emb|CAR59023.1| motility protein A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|205272155|emb|CAR37010.1| motility protein A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206708359|emb|CAR32663.1| motility protein A [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261247093|emb|CBG24914.1| motility protein A [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|301158443|emb|CBW17952.1| motility protein A [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
Length = 276
Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats.
Identities = 96/269 (35%), Positives = 154/269 (57%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
GG+ L QP E+VI+ GAG+G F++ N K IK + ++ +F + Y D+L
Sbjct: 1 MTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKAIPLLFRRSKYTKSMYMDLL 60
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
LLY LM ++ E I++P S IF S P +L + + FI DY+R+II GN
Sbjct: 61 ALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAVMLDFIVDYLRLIISGNMN 120
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
++EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+ + + LG
Sbjct: 121 TFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAVMGVVHALASADRPAAELG 180
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +NG P +A+E
Sbjct: 181 ALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAVE 240
Query: 260 YGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+GRK L SERPS + + V + +
Sbjct: 241 FGRKTLYSSERPSFIELEEHVRAVRNPNQ 269
>gi|120613044|ref|YP_972722.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120591508|gb|ABM34948.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
Length = 286
Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats.
Identities = 103/286 (36%), Positives = 156/286 (54%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + + CI G F A GGN +++ PFEIV + G LG FV+ N KV+K +
Sbjct: 1 MFVIIGYLVCLGCIFGVFIAHGGNISVVLHALPFEIVTILGGALGAFVVNNQPKVLKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L F + Y +++ +LY ++ +K E ++ P+ S IF PTV
Sbjct: 61 KALPMAFKGSKYTKARYMELMAMLYEILQKARKEGLMAIEKDVEAPHESEIFKKYPTVGT 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN ++EIE+LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DHHVIEFTTDYLRMMVSGNLNAHEIESLMDSEIETHHQEAHAPVAALARLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y + PL ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPSVLGGMIGSALVGTFLGILLAYGVVEPLGGLVEQKLEDAAKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P AIE+GRKVL +RPS + V
Sbjct: 241 QCIKTTLLASMQGYNPATAIEFGRKVLFSGDRPSFSELESHVKGKK 286
>gi|83648053|ref|YP_436488.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83636096|gb|ABC32063.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 283
Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats.
Identities = 96/282 (34%), Positives = 156/282 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ + + ++GG+ G L QPFE++I+ GA G F+++NP KVIK +
Sbjct: 1 MLLILGVIVVLASVLGGYVLSHGELAALWQPFELIIICGAAFGAFLISNPFKVIKQILHT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + Y D+L L+Y L ++ E +DDP NS IF P ++ +
Sbjct: 61 IPKMIMGSPFNRVVYMDLLSLMYDLFDKARRSGVMAIEADVDDPLNSEIFNRYPAIVRMD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++ GN +E+E LMD E++ + E KP A++ + ++LP GIV A
Sbjct: 121 KLRDFITDYLRIVSTGNMAPHELEGLMDMELETRMQELEKPADAVNRVADALPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M +L P LG + +L GT LGI+ +Y P + + + ++ + Y
Sbjct: 181 VLGIVITMKSLGGPPDELGVHVAAALVGTFLGILAAYGFVGPASHAMHNLAAQEIKAYEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK +++A M G PQ+AIE+GRK L RPS + + V
Sbjct: 241 VKVSILATMTGLAPQLAIEFGRKALNSDVRPSFQELNDYVRS 282
>gi|150395477|ref|YP_001325944.1| flagellar motor protein MotA [Sinorhizobium medicae WSM419]
gi|150026992|gb|ABR59109.1| MotA/TolQ/ExbB proton channel [Sinorhizobium medicae WSM419]
Length = 292
Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats.
Identities = 164/289 (56%), Positives = 225/289 (77%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+E F +K + Y D L +LY LM +L+ SRNE E+HID+P +S+IF S PTVL+N
Sbjct: 61 LVEAFKHKVPKERQYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEDSSIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEEIQTITHDKMKCYHALTSMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P++LG I +L GTLLG+ LSYS+ PL + IKS R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVLGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ ++
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGGSES 289
>gi|110677677|ref|YP_680684.1| flagellar motor protein MotA [Roseobacter denitrificans OCh 114]
gi|109453793|gb|ABG29998.1| chemotaxis MotA protein [Roseobacter denitrificans OCh 114]
Length = 289
Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 156/289 (53%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + GG+ A GG I+ + PFE+ ++ GA +G F+++N + IK +
Sbjct: 1 MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAVGAFLISNDMSAIKHTM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L +F + Y D+L LL+ L+ ++ + E HI+ P S+IF+ +L+
Sbjct: 61 RDLGRVFKGPKWSHEDYKDLLCLLFELIRLARQ-NPVAIEEHIEAPEESSIFSKYEKILK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD +R + +++E ++++ ++ ++ + HA+ + + LPA+GIV
Sbjct: 120 DKEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++ Q P++LG IG +L GT LG+ L+Y P +++KS + Y
Sbjct: 180 AAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFVGPFAAKVKSVTEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RPS + + + N
Sbjct: 240 QLIREVLVANLHAHATNICIEVGRQNTPSHHRPSFAELEEALKSVKQNA 288
>gi|121997036|ref|YP_001001823.1| putative chemotaxis (motility protein A) transmembrane
[Halorhodospira halophila SL1]
gi|121588441|gb|ABM61021.1| putative chemotaxis (motility protein A) transmembrane
[Halorhodospira halophila SL1]
Length = 290
Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 169/290 (58%), Gaps = 1/290 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I +I G+ A GG IL QP+E +I+ GA +GGF++ANP+KVIK +
Sbjct: 1 MLVIIGAAIAFFSVIVGYAAHGGPLAILWQPYEFLIIFGAAIGGFMIANPMKVIKRVLST 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +I G G++ Y D+L LLY + ++ E+ +D+P+ S +F S P +L ++
Sbjct: 61 VPKIPGGSPYGREHYMDLLALLYEIFQRAQRDGLLSIEDDVDNPHESELFKSYPRILNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CDY+R+++ GN +E+ENLMD EI+ E +P A++ + +++P GI+ A
Sbjct: 121 VALEFLCDYLRLMVGGNMNPFEMENLMDVEIETHHKEAAQPAAAVNKVADAMPGFGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ A+G+L + +G + +L GT GI Y+ PL + + +Q +
Sbjct: 181 LLGVVIALGSLDEDVMTIGGLVASALVGTFTGIFAGYAFVGPLGQAMDNRAAEQTKFLET 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV-LQYNHNKKA 289
+K L+A +NG P VA+E+GRK + +ERP+ + + V +Q ++ A
Sbjct: 241 IKLTLLAVLNGYKPVVAVEFGRKAMYEAERPTFFELEEHVKMQAARSQDA 290
>gi|227820850|ref|YP_002824820.1| flagellar motor protein MotA [Sinorhizobium fredii NGR234]
gi|227339849|gb|ACP24067.1| chemotaxis protein motility protein A [Sinorhizobium fredii NGR234]
Length = 292
Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 165/292 (56%), Positives = 223/292 (76%), Gaps = 2/292 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYLAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F +K + Y D L +LY LM +L+ SRNE E+HID+P S IF S PTVL+N
Sbjct: 61 LGEAFKHKVPKERHYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESPIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEEIHTITHDKMKCYHALTSMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P++LG I +L GTLLG+ LSYS+ PL + IK+ R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVLGAKIAAALVGTLLGVFLSYSIVGPLVANIKAVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY--NHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGGGESKAA 292
>gi|254474842|ref|ZP_05088228.1| chemotaxis protein MotA [Ruegeria sp. R11]
gi|214029085|gb|EEB69920.1| chemotaxis protein MotA [Ruegeria sp. R11]
Length = 289
Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 159/289 (55%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ GG I+I+ PFE +++ GAG+G F+++N + +K +
Sbjct: 1 MLGIVGIVVIFVMVFGGYLLAGGKFAIIIKALPFEFMMIGGAGIGAFLISNDMGGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F D Y D+L LL+ L+ + + E E HI+DP NS++F P +L
Sbjct: 61 KDLGKVFKGPKWKPDDYRDLLCLLFSLIRIAR-ANPVEVEQHIEDPENSSVFNRYPKILA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ I+ L+ + HA+ + + LPA+GIV
Sbjct: 120 DKEAVNLICDTMRSASMNYDDPHQVEEVLEKRIEANLHHAMHSSHALQSLADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++ Q P++LG IG +L GT LG+ L+Y + P ++KS + Y
Sbjct: 180 AAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGIVGPFAGKVKSVTEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RP + + +
Sbjct: 240 SLIREVLVANLHNHAAAICIEVGRQNTPSHIRPGFSELEDALKSVKQDA 288
>gi|326319082|ref|YP_004236754.1| flagellar motor stator protein MotA [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375918|gb|ADX48187.1| flagellar motor stator protein MotA [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 286
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 103/286 (36%), Positives = 156/286 (54%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + + CI G F A GGN +++ PFEIV + G LG FV+ N KV+K +
Sbjct: 1 MFVIIGYIVCLGCIFGVFIAHGGNISVVLHALPFEIVTILGGALGAFVVNNQPKVLKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L F + Y +++ +LY ++ +K E ++ P+ S IF PTV
Sbjct: 61 KALPMAFKGSKYTKARYMELMAMLYEILQKARKEGLMAIEKDVEAPHESEIFKKYPTVGH 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN ++EIE+LMD EI+ E P A++ + +LPA GIV
Sbjct: 121 DHHVIEFTTDYLRMMVSGNLNAHEIESLMDSEIETHHQEAHAPVAALARLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y + PL ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPSVLGGMIGSALVGTFLGILLAYGVVEPLGGLVEQKLEDAAKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P AIE+GRKVL +RPS + V
Sbjct: 241 QCIKTTLLASMQGYNPATAIEFGRKVLFSGDRPSFAELEGHVKGKK 286
>gi|163732482|ref|ZP_02139927.1| flagellar motor protein MotA [Roseobacter litoralis Och 149]
gi|161393842|gb|EDQ18166.1| flagellar motor protein MotA [Roseobacter litoralis Och 149]
Length = 289
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 155/289 (53%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + GG+ A GG I+ + PFE+ ++ GA +G F+++N + IK +
Sbjct: 1 MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAVGAFLISNDMSAIKHTM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L +F Y D+L LL+ L+ ++ + E HI+ P S+IF+ +++
Sbjct: 61 RDLGRVFKGPKWSHSDYKDLLCLLFELIRLARQ-NPVAIEEHIESPEESSIFSKYEKIVK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD +R + +++E ++++ ++ ++ + HA+ + + LPA+GIV
Sbjct: 120 DKEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++ Q P++LG IG +L GT LG+ L+Y P +++KS + Y
Sbjct: 180 AAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFVGPFAAKVKSVTEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RPS + + + N
Sbjct: 240 QLIREVLVANLHAHATNICIEVGRQNTPSHHRPSFAELEEALKSVKQNA 288
>gi|149377735|ref|ZP_01895469.1| Flagellar motor component [Marinobacter algicola DG893]
gi|149357961|gb|EDM46449.1| Flagellar motor component [Marinobacter algicola DG893]
Length = 283
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 101/282 (35%), Positives = 163/282 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I I ++GG+ GGN +L QP EI+I+ GA +G F++ANPL IK+
Sbjct: 1 MLLIIGAVIVIASVLGGYVLHGGNLLVLWQPTEILIIGGAAVGSFIIANPLHTIKEVAKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + Y D+L L+Y + +K E ID+P +S IF+ P ++++
Sbjct: 61 VLNQLTGSPYNKSFYMDLLSLMYEIFDKSRKQGVMAIEEDIDNPESSQIFSRYPAIIKSK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY+R+I GN ++E+E +M+ EI+ +E +P HA++ + ++LP +GIV A
Sbjct: 121 YLLAFITDYLRIISSGNMATHELEGMMENEIESRQHELEEPAHAVNKIADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M LS+ P+ +G ++ +L GT LGI + Y P + ++ T + + Y
Sbjct: 181 VLGIVITMNFLSEGPERIGLSVAAALVGTFLGIWMGYGFVGPTSIAMEHTAKYEIKAYEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
K A++A ++G PQ+AIE+GRK LP +RP + + V
Sbjct: 241 AKSAIVATVSGQAPQMAIEFGRKALPSDKRPGFQELNDHVRS 282
>gi|315121853|ref|YP_004062342.1| flagellar motor protein MotA [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495255|gb|ADR51854.1| flagellar motor protein MotA [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 270
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 218/270 (80%), Positives = 249/270 (92%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
MGGN ILIQPFEI+IV+GAGLGGF+MAN LKVIKDSGV++LEIFGYK++ ++ YCD+LK
Sbjct: 1 MGGNLSILIQPFEIIIVSGAGLGGFIMANSLKVIKDSGVAILEIFGYKSIEKEIYCDILK 60
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
++Y+LMY+LKK SR E ENHIDDP+NS+IFTSIPT+L NNELTTFICDY RM+I+GNA+S
Sbjct: 61 IMYVLMYSLKKISRTELENHIDDPHNSSIFTSIPTILSNNELTTFICDYFRMVIIGNAQS 120
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
+EIE LMDEEI+IILYEKLKPYHAIS+MGES PAIGIVGAILGIIKAMGNLSQSPKILG
Sbjct: 121 HEIETLMDEEIEIILYEKLKPYHAISNMGESFPAIGIVGAILGIIKAMGNLSQSPKILGV 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
AIG SLTGT+LGI+LSY +CNPLTSQI S RL+QHRLYIIVKK LIAYMNGAIPQVAIEY
Sbjct: 181 AIGASLTGTMLGILLSYCICNPLTSQIHSIRLRQHRLYIIVKKTLIAYMNGAIPQVAIEY 240
Query: 261 GRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
GRKVLPL ERPSIEIV QEVL+Y+++KK S
Sbjct: 241 GRKVLPLFERPSIEIVEQEVLRYSNHKKES 270
>gi|217976216|ref|YP_002360363.1| MotA/TolQ/ExbB proton channel [Methylocella silvestris BL2]
gi|217501592|gb|ACK49001.1| MotA/TolQ/ExbB proton channel [Methylocella silvestris BL2]
Length = 323
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 139/283 (49%), Positives = 201/283 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ +IG +T+ C++GGF AMGG+ ++ QP+E VI+ G LG F++AN L IKD+G +
Sbjct: 31 LAFLIGTIVTLGCMLGGFAAMGGHLSVIFQPWEFVIILGVSLGTFIIANSLATIKDTGAA 90
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ + + Y DVL +LY LM L+ +R+E E H+D+P S IF + P VL +
Sbjct: 91 IVDAVLDRGPTERDYLDVLGVLYTLMRELRGKARSEVEQHVDNPAESAIFKNFPKVLADV 150
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT+FICDY R+II+GNAR++EIE LMDEEI + ++KLKPYHA+ + + LPAIGIV A
Sbjct: 151 NLTSFICDYCRLIIIGNARTHEIEALMDEEIHTLTHDKLKPYHALQSVADGLPAIGIVAA 210
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++KAMG L QSP+ILG IG +L GT GI +SY + +PL +IK R + RLYII
Sbjct: 211 VLGVVKAMGALDQSPEILGGLIGAALIGTFAGIFVSYGVVSPLAHKIKVARAVRCRLYII 270
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
VK+ L+A+MNGA+PQ+A+E+GRK + +RPSI++V E +
Sbjct: 271 VKQTLLAFMNGAMPQIALEHGRKTIASHDRPSIDMVENETVSG 313
>gi|15964407|ref|NP_384760.1| flagellar motor protein MotA [Sinorhizobium meliloti 1021]
gi|307311549|ref|ZP_07591190.1| flagellar motor protein MotA [Sinorhizobium meliloti BL225C]
gi|307318904|ref|ZP_07598335.1| flagellar motor protein MotA [Sinorhizobium meliloti AK83]
gi|17380459|sp|P97215|MOTA_RHIME RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|15073584|emb|CAC45226.1| Chemotaxis (motility protein A) transmembrane [Sinorhizobium
meliloti 1021]
gi|306895318|gb|EFN26073.1| flagellar motor protein MotA [Sinorhizobium meliloti AK83]
gi|306899566|gb|EFN30195.1| flagellar motor protein MotA [Sinorhizobium meliloti BL225C]
Length = 292
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 164/289 (56%), Positives = 223/289 (77%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F +K + Y D L +LY LM +L+ SRNE E+HID+P S+IF S PTVL+N
Sbjct: 61 LGEAFRHKVPKEREYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESSIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P++LG I +L GTLLG+ LSYS+ PL + IKS R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVLGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ ++
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGGSES 289
>gi|332095071|gb|EGJ00105.1| chemotaxis protein motA [Shigella dysenteriae 155-74]
Length = 276
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 99/271 (36%), Positives = 159/271 (58%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
GG+ L QP E+VI+AGAG+G F++ N K IK + +L +F + Y D+L
Sbjct: 1 MTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLL 60
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
LLY LM ++ E I++P S IF S P +L ++ + FI DY+R+II G+
Sbjct: 61 ALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMN 120
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
++EIE LMDEEI+ E P ++++ +G+SLPA GIV A++G++ A+G+ + LG
Sbjct: 121 TFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAELG 180
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
I ++ GT LGI+L+Y +PL S ++ + ++ VK L++ +NG P +A+E
Sbjct: 181 ALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVE 240
Query: 260 YGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+GRK L SERPS + + V + ++ +
Sbjct: 241 FGRKTLYSSERPSFIELEEHVRAVKNPQQQT 271
>gi|254505141|ref|ZP_05117292.1| hypothetical protein SADFL11_5181 [Labrenzia alexandrii DFL-11]
gi|222441212|gb|EEE47891.1| hypothetical protein SADFL11_5181 [Labrenzia alexandrii DFL-11]
Length = 297
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 136/278 (48%), Positives = 195/278 (70%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+IGGF AMGG +L QP+E+VI+ G +G F++ANP+KVI + V++ + +
Sbjct: 13 SLIGGFAAMGGKVLVLWQPWELVIILGVAIGAFIVANPVKVILGTTVAVSDALRNAVPSK 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
Y DVL LLY LM L+ RN E HI+DP S IF P+VL + +TTFICDY R+
Sbjct: 73 RDYLDVLALLYGLMRELRAKGRNAVEPHIEDPSTSPIFQKYPSVLRDANMTTFICDYFRL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
IIVGNAR++EIE L+DEEI I +++KPYHA+S + ++LPAIGI+ A+LG+IKAMG +
Sbjct: 133 IIVGNARAHEIEALVDEEIQTIHRDQMKPYHAMSSVADALPAIGIIAAVLGVIKAMGAID 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
QSP++LG+ IG +L GT +GI+ SYSL PL ++IKS R + R YI+VK+ L+A+MNGA
Sbjct: 193 QSPQLLGSLIGAALVGTFIGILFSYSLFGPLAAKIKSVRETRLRNYIVVKQTLLAFMNGA 252
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
PQ+A+E+GRK + +RP+I+ V E ++ + ++
Sbjct: 253 DPQIALEHGRKTISGYDRPTIDEVENETMRAGGAETST 290
>gi|300024615|ref|YP_003757226.1| flagellar motor protein MotA [Hyphomicrobium denitrificans ATCC
51888]
gi|299526436|gb|ADJ24905.1| flagellar motor protein MotA [Hyphomicrobium denitrificans ATCC
51888]
Length = 306
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 143/293 (48%), Positives = 205/293 (69%), Gaps = 4/293 (1%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+ +IGLFIT+ C++GGF AMGG+ ++ QP+E VI+ GA LG FV+ANP+K IKD G +
Sbjct: 14 TILIGLFITLACMLGGFTAMGGHVMVIWQPWEYVIICGAALGTFVVANPMKTIKDCGTAT 73
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ F D + ++L LL+ +M L+ SR E E ID P +S +F P+V N+E
Sbjct: 74 TQAFRNDVPTMDEHIELLSLLFFMMRELRDKSRAEMEMIIDAPQDSEVFKRSPSVTANDE 133
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
LTTFICDY R+II+GNAR++EIE+LMDEEI+ ++KLK YHA+ +G+ LPA+GI+ A+
Sbjct: 134 LTTFICDYFRLIIMGNARTHEIESLMDEEIETARHDKLKAYHALVAVGDGLPALGIIAAV 193
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++KAMG + QSP+ILG I +L GT GI SY++ PL +++K R K+ R Y+IV
Sbjct: 194 LGVVKAMGAIDQSPEILGHLIASALVGTFAGIFFSYAVVGPLATKVKIVREKRLRSYVIV 253
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL----QYNHNKKAS 290
K++L+A+MNGA+PQVAIE+GRK + ERP+I V + + +KKA+
Sbjct: 254 KQSLLAFMNGAMPQVAIEHGRKAISAYERPTINEVEAATISGGARPGESKKAA 306
>gi|1842124|gb|AAB47573.1| membrane associated protein MotA [Sinorhizobium meliloti]
gi|1870713|gb|AAB48837.1| MotA [Sinorhizobium meliloti]
Length = 292
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 163/289 (56%), Positives = 223/289 (77%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F +K + Y D L +LY LM +L+ SRNE E+HID+P S+IF S PTVL+N
Sbjct: 61 LGEAFRHKVPKEREYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESSIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P+++G I +L GTLLG+ LSYS+ PL + IKS R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVVGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ ++
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGGSES 289
>gi|170748395|ref|YP_001754655.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
gi|170654917|gb|ACB23972.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
Length = 287
Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats.
Identities = 99/282 (35%), Positives = 154/282 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I C+ G + AMGG+ +L QPFE VI+ GA +G FV+ N V+K
Sbjct: 1 MRLIVGTLIVFACVFGSYAAMGGHLLVLWQPFEFVIILGAAIGAFVIGNTGPVLKAVPAM 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + Q +Y ++L + Y L K+ E HI+DP ST+F + PT N+
Sbjct: 61 LGTLVKGPKYNQQSYVELLGMQYSLFRLAKQKGSMALEPHIEDPGESTLFNAFPTFAANH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CDYMRM+ +G +EI+ LMDEE++ E+ + A+ + + PA+GIV A
Sbjct: 121 HAVEFVCDYMRMVTLGANNVHEIDALMDEELETHHQEQERVVSAMQSLADGTPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IK MG + + P++LG IG +L GT G+ ++Y P+ +KS + + Y+
Sbjct: 181 VLGVIKTMGAIKEPPEVLGHLIGGALVGTFFGVFVAYGFFGPMAQSLKSLFEAESKYYLS 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A++ G P +A+E+ RK L RP+ V
Sbjct: 241 LKAGLLAHIAGQPPVMAVEFARKALMSDVRPTFNEVEAATAA 282
>gi|144899851|emb|CAM76715.1| chemotaxis (motility protein A) transmembrane [Magnetospirillum
gryphiswaldense MSR-1]
Length = 286
Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 163/282 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ +TI +IGG+ A GG+ +L QPFE +I+ GA G + NP ++
Sbjct: 1 MFAIIGIVVTIASVIGGYAAAGGHLDVLWQPFEFIIILGAAFGSMFLGNPKDIVMGVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F +D Y ++L +LY + K E+H++ P S +F P ++
Sbjct: 61 IGMVFKGAHYKKDAYIEMLSMLYAVFKLAKTKGDLALESHVEKPDESPLFQKFPGFSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF CDY+R++ +G + ++E+E+++D E++ + HA++ M +++PA+GIV A
Sbjct: 121 HTRTFFCDYLRLLTLGTSNAHELESIIDGELEAHHKHYHEISHAVNLMADAMPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I MG++++ P++LG IG +L GT G+++SY+ P+ ++ + H +
Sbjct: 181 VLGVIHTMGSITEPPEVLGHLIGAALVGTFTGVLISYAFFAPMARNMQMSFDSDHYYLLA 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A+M G PQV+IE+ RK+LP RP+ + + + V
Sbjct: 241 IKAGLLAHMQGYAPQVSIEFARKILPDELRPTFQELEETVTN 282
>gi|12214187|emb|CAA11955.2| motA protein [Sinorhizobium meliloti]
Length = 292
Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats.
Identities = 165/289 (57%), Positives = 223/289 (77%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIGL +T CI+GG+ AMGG+ +L QPFE++I+ GAG+GGF+MAN +KV+KD+G +
Sbjct: 1 MNIIIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F +K + Y D L +LY LM +L+ SRNE E+HID+P S+IF S PTVL+N
Sbjct: 61 LGEAFRHKVPKEREYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESSIFQSAPTVLQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARSYEIE LMDEEI I ++K+K YHA++ MG++LPAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSYEIEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +S++P++LG I +L GTLLG+ LSYS+ PL + IKS R KQ+RLY+I
Sbjct: 181 VLGVIKAMGAISEAPEVLGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ ++
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGGSES 289
>gi|23013134|ref|ZP_00053072.1| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 286
Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 168/282 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ +T + +IGG+ A GG+ +L QPFE +I+ GA +G ++ NP VI G +
Sbjct: 1 MFAIIGIVVTFVSVIGGYAAPGGHLGVLFQPFEWLIIIGAAVGSLLLGNPKTVILGIGKN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F G+D Y ++L +LY + K E+H++ P S +F P ++
Sbjct: 61 IGLVFKGAHHGKDDYIELLSVLYAVFKLAKTKGDLALESHVEKPDESPLFGKFPKFSSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF CDY+R++ +G + ++E+E+++D E++ + HA++ MG+++PA+GIV A
Sbjct: 121 HTRTFFCDYLRLLTLGTSNAHELESIIDGELEAHHKHYHEIAHAVNLMGDAMPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I MG++++ P++LG IG +L GT G+++SY+ P+ ++ H ++
Sbjct: 181 VLGVIHTMGSITEPPEVLGHLIGAALVGTFSGVLISYAFIAPIARNMQLCFDSDHYYFMA 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+ +M G PQV+IE+ RK+LP RP+ + + + V
Sbjct: 241 IKAGLLGHMQGYAPQVSIEFARKILPDELRPTFQELEETVTN 282
>gi|312115255|ref|YP_004012851.1| flagellar motor protein MotA [Rhodomicrobium vannielii ATCC 17100]
gi|311220384|gb|ADP71752.1| flagellar motor protein MotA [Rhodomicrobium vannielii ATCC 17100]
Length = 289
Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats.
Identities = 131/290 (45%), Positives = 191/290 (65%), Gaps = 1/290 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +GLF+T+ C++ G+ MGG+ ++ QP E +I+ GA +G F++ANP+KVIKD+G
Sbjct: 1 MTIALGLFVTLGCMLAGYVWMGGHVAVIWQPAEYLIICGAAIGTFIVANPMKVIKDTGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ + Y VL LY LM K ++E E HIDDP S+IF + P VL
Sbjct: 61 IVDALKNSEPKESDYLAVLGFLYALMREFKNKPKSEVEKHIDDPSKSSIFANYPEVLAKP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+ I+GNAR EIE LMDEEI I ++ LKPYHA+ + E+ PA+GIV A
Sbjct: 121 DLTQFICDYARLHIMGNARPAEIEALMDEEIQTIRHDGLKPYHALHAVSEAFPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM L + P++LG I ++ GT GI LSY++ P+ +++K+ R KQ LY++
Sbjct: 181 VLGVIKAMAALDKPPEVLGELIASAMVGTFAGIFLSYAVVAPIATKLKTVREKQLHLYML 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ +A+MNGA+ VA+E+GRK++ ERP+I V E L KA+
Sbjct: 241 VKQTFLAFMNGAMASVAVEHGRKMISAHERPTINRVE-ESLTGTPEAKAA 289
>gi|254497975|ref|ZP_05110738.1| flagellar motor protein MotA [Legionella drancourtii LLAP12]
gi|254352752|gb|EET11524.1| flagellar motor protein MotA [Legionella drancourtii LLAP12]
Length = 300
Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 168/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + +LC+ GGF GG+ + QP E++I+ GA +G ++ N L V+K G +
Sbjct: 1 MLIIIGYIVVLLCVFGGFALGGGHLAAIFQPVELLIIGGAAVGSLIVGNSLSVLKALGRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++F + + TY +L LLY L+ ++ E+ I++P +S IFT+ P+++ +
Sbjct: 61 IPKVFRSEKTSKATYISLLGLLYNLLNKARQQGMMSIESDIEEPESSPIFTNYPSLMSEH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FICDY R+II N + +++E LMD EI+ E+L P + I+ + +++PA GIV A
Sbjct: 121 HIIEFICDYFRLIITSNMQPFQLEALMDMEIESHHEEELIPANTITKVADAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++S P LG I +L GT LGI++ Y P+ + ++ + +
Sbjct: 181 VLGVVHTMESISLPPAELGILIAHALVGTFLGILIGYGFIGPIATAMEQRANQTQLMLQS 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K ++A ++ P +A+E+GRKVL ++RPS + E+ + AS
Sbjct: 241 IKATILASLHNNPPLIAVEFGRKVLFSAQRPSFTQLNDEIKNVKQAEPAS 290
>gi|260222451|emb|CBA32027.1| Chemotaxis protein motA [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 285
Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 99/284 (34%), Positives = 159/284 (55%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + + C+ G F GGN +++ P+E++ + GA +G F+ N +KVIK +
Sbjct: 1 MFVIIGWLVCLGCVFGVFIIHGGNISVILHALPWEMLTIGGATVGAFLANNQMKVIKKTV 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L F + Y ++L LL+ ++ +K E +++P S IF PTV
Sbjct: 61 AGLGACFKGSKYTKARYMELLALLFDILQKARKEGLMAIEKDVEEPEQSEIFKKYPTVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + FI DY+RM++ GN ++EIE++MD EI+ +E+ AI + LPA GIV
Sbjct: 121 DHHVIEFITDYLRMMVSGNLNAHEIESIMDSEIETHHHEEHAAVAAIQRIAGGLPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y+ PL ++ + + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYAFAEPLAGLLEQKVEEGSKEF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A M G P AIE+GRKVL +ERP+ + V +
Sbjct: 241 QCIKTTLLASMQGYNPSTAIEFGRKVLYSTERPTFGELEAHVKK 284
>gi|170741397|ref|YP_001770052.1| chemotaxis MotA protein [Methylobacterium sp. 4-46]
gi|168195671|gb|ACA17618.1| chemotaxis MotA protein [Methylobacterium sp. 4-46]
Length = 290
Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 146/290 (50%), Positives = 200/290 (68%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL I + +IGGF A GG+ ++ QP+E VI+ G +G FV+ANP+K + DSG
Sbjct: 1 MGVLIGLVIALGAMIGGFLAEGGHLAVIWQPWEFVIIGGMAIGTFVIANPMKTVVDSGKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LLE + + Y +L LL+ LM LK RNE E H+DDP NS+IF + P +L+N
Sbjct: 61 LLEAVTDRVPKRKDYLSLLGLLHALMRELKAKPRNEVEPHLDDPANSSIFKNYPDILKNL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY R+I++GNAR +EIE LMDEEI + LKPY +IS + E+LPA+GIV A
Sbjct: 121 ELTMFICDYARLILIGNARPHEIEALMDEEIGTHKRDALKPYASISTVAEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ AMG L Q P +LG IG +L GTL GI LSY + PL S++K R KQ R+Y+I
Sbjct: 181 VLGIVNAMGALDQPPHVLGHLIGAALIGTLGGITLSYGILAPLASKVKMVRDKQTRVYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK++LIAYMNGA+PQ+A+E+GRK + L++RP+I+ V + ++A+
Sbjct: 241 VKQSLIAYMNGALPQIAVEHGRKGISLADRPTIDEVETATVGGGQQREAA 290
>gi|32490781|ref|NP_871035.1| flagellar motor protein MotA [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25165987|dbj|BAC24178.1| motA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 296
Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats.
Identities = 97/286 (33%), Positives = 160/286 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + + + GGF G L QP E++I+ GAGLG F++ N K I + +
Sbjct: 1 MLIIVGYCVVFISVFGGFLLAEGQIGALFQPVELLIILGAGLGAFIVGNNGKAIFATIKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++F ++ Y DV+ L+Y L+ ++ E ID P S IF+S P ++E++
Sbjct: 61 FPKLFHSSKYNKNMYMDVMTLMYRLLSKSRQSGLISLEKDIDFPKKSKIFSSYPALIEDD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY R+++ GN SYEIE LM+EEI+ E P ++ +G++LPA GIV A
Sbjct: 121 LIIDFIVDYFRLMVSGNLNSYEIEALMNEEIETCEQEHEVPITSLLQVGDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + LG I ++ GT LGI+L+Y PL + +K + ++
Sbjct: 181 VMGVVNALAAADRPAAELGELIAHAMVGTFLGILLAYGCVMPLGALLKQKSDEHIKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+K L++ +NG PQ+AIE+GRK+L ERPS + + + + +
Sbjct: 241 IKITLLSSINGYAPQIAIEFGRKILYSPERPSFNELEEHIRKVKKS 286
>gi|254463720|ref|ZP_05077131.1| chemotaxis protein MotA [Rhodobacterales bacterium Y4I]
gi|206684628|gb|EDZ45110.1| chemotaxis protein MotA [Rhodobacterales bacterium Y4I]
Length = 289
Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats.
Identities = 89/289 (30%), Positives = 159/289 (55%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + GG+ GG I+++ PFE++++ GA +G F++AN + +K +
Sbjct: 1 MIGIVGIVVIFAMVFGGYLLAGGKMAIILKSLPFEMMMIGGAAVGAFLIANDMGGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F D Y D+L LL+ L+ + + E E HI+DP NS++F P +L
Sbjct: 61 KDIGKVFKGPKWKPDDYRDLLCLLFALIRIAR-ANPVEVEQHIEDPENSSVFNKYPKILG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ ++ L+ L HA+ M + LPA+GIV
Sbjct: 120 DKEAVNLICDTMRSASMNYDDPHQVEEVLEKRMEANLHHALHSSHALQTMADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ LSY L P ++K+ + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLSYGLVAPFAGKVKAVVEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RP + + + +
Sbjct: 240 QLIREVLVANLHNHAAAICIEVGRQNTPSHFRPGFSELEEALKSVKQDA 288
>gi|126730125|ref|ZP_01745937.1| flagellar motor protein MotA [Sagittula stellata E-37]
gi|126709505|gb|EBA08559.1| flagellar motor protein MotA [Sagittula stellata E-37]
Length = 289
Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 156/289 (53%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + GG+ A GG I+++ PFE +++ GA +G F++ N +K +
Sbjct: 1 MLGIIGIVVLFAMVFGGYLAAGGKMGIILKALPFEFMMIGGAAVGAFLIGNDGGTVKHAL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + Y D+L LL+ L+ ++ + E HI+ P STIF P +L
Sbjct: 61 KDIGKVFKGAKWKHEDYRDLLCLLFELIRLARQ-NPVAIEEHIESPSESTIFGKYPKILG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ICD MR + + +++E ++D+ ++ + + + HA+ M ++LPA+GIV
Sbjct: 120 DKYAIELICDTMRSVSMNYDDPHQVEEVLDKRLEGMEHHAMHSSHALQSMADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P++LG IG +L GT LG+ L+Y L P ++K+ + Y
Sbjct: 180 AAVLGVIKTMASIDQPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAGKVKAVAEEDMHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RP+ E + + +
Sbjct: 240 HLIREVLVANLHNHATNICIEVGRQNTPGHFRPTFEDLEEALKSVKQEA 288
>gi|121611335|ref|YP_999142.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121555975|gb|ABM60124.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 286
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 99/284 (34%), Positives = 157/284 (55%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IG + + CI G + GGN ++++ P+E+VI+ G LG FV+ N KVIK +
Sbjct: 1 MYVCIGYLLCLGCIFGAYILHGGNIGVILKALPYELVIIGGGALGAFVVNNQGKVIKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ F ++ Y +++ +L+ L+ +++ + E +DDP S IF+ PTV
Sbjct: 61 RAIPSAFPASRYTKERYMELMAMLHELLQKIRREGLLKIEKDVDDPQGSPIFSKYPTVGR 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ + F+ DY+RM++ GN ++EIE LMD EID E P A++ + +LPA GIV
Sbjct: 121 DPRVIEFMTDYLRMMVSGNLNAHEIEALMDSEIDTYHQESHAPVAALARLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ M + Q P +LG IG +L GT LGI+L+Y + P ++ +
Sbjct: 181 AAVLGVVNTMSAMGQPPAVLGAMIGSALLGTFLGILLAYGVVEPFGGLLEQRADDAGKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A M G P AIE+GRKVL S RP + + V +
Sbjct: 241 QCIKSTLLASMQGYNPATAIEFGRKVLFSSVRPGFLELEKHVKE 284
>gi|85058001|ref|YP_453703.1| flagellar motor protein MotA [Sodalis glossinidius str.
'morsitans']
gi|84778521|dbj|BAE73298.1| chemotaxis protein MotA [Sodalis glossinidius str. 'morsitans']
Length = 298
Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats.
Identities = 98/285 (34%), Positives = 156/285 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + I GGF G L QP E +I+ GAGLG F++ N K I + S
Sbjct: 1 MLVIVGYIIVFMSIFGGFLLAEGQLGALFQPAEFMIIVGAGLGTFIVGNNGKAIFATLKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + Y DV+ L+Y L+ ++ E IDDP+NS IF P++L +
Sbjct: 61 FPRLFHSSRYNKAMYMDVMALMYRLLSKSRQSGLITLEKEIDDPHNSVIFAHYPSLLADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+R+++ GN YEIE LM+EEI+ E P ++ +G++LPA GI+ A
Sbjct: 121 LVIDFLIDYLRLMVSGNLNVYEIEALMNEEIETYEQENDIPVSSLLQVGDALPAFGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + LG I ++ GTLLGI+L+Y PL + +K + ++
Sbjct: 181 VMGVVNALAAADRPAGELGALIANAMVGTLLGILLAYGCVMPLGALLKQKGDEHIKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++ L++ +NG P +AIE+GRK L SERPS + + + +
Sbjct: 241 IRVTLLSSLNGYAPPIAIEFGRKTLYSSERPSFDELEAHLRRIKK 285
>gi|260429107|ref|ZP_05783084.1| lateral flagellar motor protein MotA [Citreicella sp. SE45]
gi|260419730|gb|EEX12983.1| lateral flagellar motor protein MotA [Citreicella sp. SE45]
Length = 289
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + GG+ GG I+++ PFE++++ GA LG F++ N V+K +
Sbjct: 1 MLGIIGIVVIFAMVFGGYVLAGGKMGIILKALPFEMMMIGGAALGTFLLGNDGGVVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F Y D+L LL+ L+ ++ S E H++ P S+IF+ P +
Sbjct: 61 KDISKVFKGTKWKPGDYKDLLCLLFELIRLARQ-SPVAIEEHVETPGESSIFSKYPKIQG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ICD MR + + +++E ++D+ I+ + + +L HA+ ++LPA+GIV
Sbjct: 120 DKVAIELICDTMRSMSMNYDDPHQVEEVLDKRIEALQHHRLHSSHALQSTADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M + Q P++LG IG +L GT LG+ L+Y P ++KS + Y
Sbjct: 180 AAVLGVIKTMAAIDQPPEVLGKMIGGALVGTFLGVFLAYGFFGPFAGKVKSVVEEDLHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RPS + + +
Sbjct: 240 QLIREVLVANLHNHATNICIEVGRQNTPAHFRPSFVDLEEALKDVKQAA 288
>gi|311695401|gb|ADP98274.1| flagellar motor protein MotA [marine bacterium HP15]
Length = 283
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 98/282 (34%), Positives = 163/282 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + ++ G+ GGN +L QP E++I+ GA LG F++ANP+ +K+
Sbjct: 1 MLLIVGSIIVLASVLTGYVLHGGNLMVLWQPTEVLIIFGAALGSFIIANPVHTLKEVFGK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ + Y D+L LLY + +K E ID+P S IF+ P V+++
Sbjct: 61 GVQLLTGSPYKKAFYMDLLSLLYEIFDKSRKQGVMAIEEDIDNPEASQIFSRYPAVMKSK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL FI DY+R+I GN ++E+E +M+ EID +E +P HA++ + ++LP +GIV A
Sbjct: 121 ELLAFITDYLRIISSGNMATHELEGMMENEIDSRQHELEEPAHAVNKIADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M L++ P+ +G ++ +L GT LGI + Y P + ++ + + Y
Sbjct: 181 VLGIVITMNFLTEGPEKIGLSVAAALVGTFLGIFMGYGFVGPASIAMEHAAKYELKAYEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK A++A ++G PQ+AIE+GRK LP +RP + + V
Sbjct: 241 VKSAIVATVSGQAPQMAIEFGRKALPTDKRPGFQELNDHVRS 282
>gi|94312619|ref|YP_585828.1| chemotaxis protein MotA [Cupriavidus metallidurans CH34]
gi|93356471|gb|ABF10559.1| chemotaxis MotA protein, proton conductor component of flagella
motor [Cupriavidus metallidurans CH34]
Length = 299
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 93/267 (34%), Positives = 156/267 (58%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG+ L QP E++I+ GA +G F+ +N K IK + ++ + ++ Y DV
Sbjct: 31 ALTGGHMGALYQPAELIIIGGAAVGAFISSNSGKAIKATMKAMPSLLKGSKYKKELYLDV 90
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ LLY+L+ ++ E I DP +S++F+ P +L + ++ F+ DY+RM++ GN
Sbjct: 91 MALLYVLLSKARREGILFLEKEIADPASSSVFSQYPRILADAKMMEFLTDYLRMMVNGNM 150
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++EIE LMD EI+ + +E P HA+S +G+ LPA GIV A++G++ A+ + P L
Sbjct: 151 NAFEIEALMDHEIETVRHEAEIPAHALSRVGDGLPAFGIVAAVMGVVHALASADLPPAEL 210
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I ++ GT LGI+L+Y +PL S+++ + ++Y +K L+A +NG P VA+
Sbjct: 211 GALIANAMVGTFLGILLAYGFVSPLASRVEHQVSESIKMYECIKVTLLASLNGYAPLVAV 270
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQYNH 285
E+GRKVL + RPS + V +
Sbjct: 271 EFGRKVLYSTVRPSFLELDDHVREVKS 297
>gi|163738050|ref|ZP_02145466.1| chemotaxis protein MotA [Phaeobacter gallaeciensis BS107]
gi|163742554|ref|ZP_02149940.1| flagellar motor protein MotA [Phaeobacter gallaeciensis 2.10]
gi|161384139|gb|EDQ08522.1| flagellar motor protein MotA [Phaeobacter gallaeciensis 2.10]
gi|161388666|gb|EDQ13019.1| chemotaxis protein MotA [Phaeobacter gallaeciensis BS107]
Length = 289
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 91/289 (31%), Positives = 158/289 (54%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ GG I+I+ PFE +++ GAG+G F+++N + +K +
Sbjct: 1 MLGIVGIVVIFVMVFGGYLLAGGKFAIIIKALPFEFMMIGGAGVGAFLISNDMGGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F D Y D+L LL+ L+ + + E E HI+DP NS++F P +L
Sbjct: 61 KDLGKVFKGPKWKPDDYRDLLCLLFSLIRIAR-ANPVEVEQHIEDPENSSVFNRYPKILA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E I D MR + +++E ++++ I+ L+ L HA+ + + LPA+GIV
Sbjct: 120 DKEAVNLISDTMRSASMNYDDPHQVEEVLEKRIEANLHHALHSSHALQSLADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++ Q P++LG IG +L GT LG+ L+Y L P ++KS + Y
Sbjct: 180 AAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAGKVKSVVEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RP + + +
Sbjct: 240 SLIREVLVANLHNHAAAICIEVGRQNTPSHIRPGFSELEDALKSVKQDA 288
>gi|77464894|ref|YP_354398.1| flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126463736|ref|YP_001044850.1| flagellar motor protein MotA [Rhodobacter sphaeroides ATCC 17029]
gi|221640815|ref|YP_002527077.1| flagellar motor protein MotA [Rhodobacter sphaeroides KD131]
gi|332559793|ref|ZP_08414115.1| MotA2 [Rhodobacter sphaeroides WS8N]
gi|77389312|gb|ABA80497.1| Flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126105400|gb|ABN78078.1| flagellar motor protein [Rhodobacter sphaeroides ATCC 17029]
gi|221161596|gb|ACM02576.1| Flagellar motor protein precursor [Rhodobacter sphaeroides KD131]
gi|332277505|gb|EGJ22820.1| MotA2 [Rhodobacter sphaeroides WS8N]
Length = 289
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 159/289 (55%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ GG ++++ PFE++++ GA +G F++AN L +K +
Sbjct: 1 MFGIVGILVIFVMVFGGYMLAGGKLGVILKALPFEMIMIGGAAVGSFLLANDLATVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F Y D+L LL+ L+ + K + E HI++P S++F+ P +
Sbjct: 61 KDLGKVFKGPKWKPGDYRDLLCLLFELVR-IAKVNPVGLEEHIENPEESSVFSRYPKIQH 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+++ ICD +R + ++E ++D+ ++ + L HA+ M ++LPA+GIV
Sbjct: 120 DHDAIELICDTLRAASMNYDDPNQVEEVLDKRVEKAQHHALHSSHALQSMADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P+ILG IG +L GT LG+ L+Y + P +++K+ + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEILGKMIGGALVGTFLGVFLAYGIVGPFATRVKAVVEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ LIA ++ + IE GR+ P RPS + + +
Sbjct: 240 NLIREVLIANLHNHPANMCIEVGRQNTPHHVRPSFTDLEEAIRALKQEA 288
>gi|27381993|ref|NP_773522.1| flagellar motor protein MotA [Bradyrhizobium japonicum USDA 110]
gi|27355163|dbj|BAC52147.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
Length = 349
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 144/283 (50%), Positives = 202/283 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ + +G+FIT+ ++GGF AMGG+ +L+QP+E VI+ G +G F++ANP K + D+GV+
Sbjct: 52 LLSFVGIFITVAALLGGFAAMGGHLAVLMQPWEFVIIMGTAVGTFIVANPWKTVVDTGVA 111
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ GQ Y D+L L+ LM L+ RNE E HIDDP +S IF + P+VL +
Sbjct: 112 CMQAITGAVPGQRYYLDLLGALHALMRELRGKGRNEVEAHIDDPASSEIFKAFPSVLGDP 171
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICDY+R+II+GNAR++EIE LMDEEI I+ KL PYH++ + E+LPA+GIV A
Sbjct: 172 SLLQFICDYVRLIIMGNARTHEIEALMDEEIHTIVKGKLAPYHSLVTVSEALPALGIVAA 231
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG L QSPK+LG IG +L GT GI LSY + +P +IK TR K+ R YII
Sbjct: 232 VLGVIKAMGALDQSPKLLGGFIGAALVGTFAGIFLSYGIISPFAIKIKMTREKKCRPYII 291
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
VK+ L+A+MNGA+PQ+A+E+GRK++ SERPSI++V E +
Sbjct: 292 VKQTLLAFMNGAMPQIAVEHGRKMISSSERPSIDVVENETIAG 334
>gi|126738568|ref|ZP_01754273.1| flagellar motor protein MotA [Roseobacter sp. SK209-2-6]
gi|126720367|gb|EBA17073.1| flagellar motor protein MotA [Roseobacter sp. SK209-2-6]
Length = 289
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 87/289 (30%), Positives = 159/289 (55%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ I + + GG+ GG I+++ PFE++++ GA +G F++ N +K +
Sbjct: 1 MIGIVGILIIFVMVFGGYLLAGGKMAIILKSLPFEMMMIGGAAVGAFLIGNDASGVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F D Y D+L LL+ L+ + + E E HI+DP NS++F P +L
Sbjct: 61 KDVGKVFKGPKWKSDDYRDLLCLLFSLIRIAR-ANPVEVEQHIEDPENSSVFNKYPKILG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD MR + +++E ++++ ++ L+ + HA+ M + LPA+GIV
Sbjct: 120 DSEAVNLICDTMRSASMNYDDPHQVEEVLEKRMEANLHHAMHSSHALQTMADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y L P ++K+ + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKMIGGALVGTFLGVFLAYGLVGPFAGKVKTITEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RP + + + +
Sbjct: 240 QLIREVLVANLHNHAAAICIEVGRQNTPSHIRPGFSELEEALRSVKQDA 288
>gi|83311677|ref|YP_421941.1| flagellar motor component [Magnetospirillum magneticum AMB-1]
gi|82946518|dbj|BAE51382.1| Flagellar motor component [Magnetospirillum magneticum AMB-1]
Length = 286
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 167/282 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ +T + +IGG+ A GG+ +L QPFE +I+ GA +G ++ NP +I +
Sbjct: 1 MFAIIGIVVTFVSVIGGYAAPGGHLSVLFQPFEWLIIIGAAVGSLLLGNPKTIIIGISKN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F G+D Y ++L +LY + K E+H++ P S +F P ++
Sbjct: 61 LGLVFKGAHHGKDDYIELLSVLYAVFKLAKTKGDLALESHVEKPDESPLFGKFPKFSSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF CDY+R++ +G + ++E+E+++D E++ + HA++ MG+++PA+GIV A
Sbjct: 121 HTRTFFCDYLRLLTLGTSNAHELESIIDGELEAHHKHYHEIAHAVNLMGDAMPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I MG++++ P++LG IG +L GT G+++SY+ P+ ++ H ++
Sbjct: 181 VLGVIHTMGSITEPPEVLGHLIGAALVGTFSGVLISYAFIAPIARNMQLCFDSDHYYFLA 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+ +M G PQV+IE+ RK+LP RP+ + + + V
Sbjct: 241 IKAGLLGHMQGYAPQVSIEFARKILPDELRPTFQELEETVTN 282
>gi|85859044|ref|YP_461246.1| chemotaxis protein [Syntrophus aciditrophicus SB]
gi|85722135|gb|ABC77078.1| chemotaxis protein [Syntrophus aciditrophicus SB]
Length = 303
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 91/285 (31%), Positives = 164/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ I +IGG+ GN +L QP E +I+ GA +GGF++++P KV+K S
Sbjct: 19 MLAIIGIVIVFTTVIGGYLLEHGNLAVLFQPAEFLIIFGAAIGGFLISSPSKVVKAVIKS 78
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF K + Y + L LL + Y +++ E+ +D P S +F+ P++L N
Sbjct: 79 ISRIFRGKTFDKKDYTEALMLLNGIFYKIRQQGLVSIESDVDSPQESPLFSQYPSILNNT 138
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
I D +R ++ +E++ L+D E+D+ E ++P +++ + ++LP +GIV A
Sbjct: 139 HAIDLITDTLRTVMTTTIAPHELDALIDHELDVYYEEMMQPAKSVNFVADALPGLGIVAA 198
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG +S+ P++LG IG +L GT +G++ Y P+ I+ + +
Sbjct: 199 VLGVVLTMGKISEPPEVLGKCIGAALVGTFIGVLTCYGFVGPMGKNIEHQAGENILYLTV 258
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K AL+A++ G+ P+VA+E+GR+V+P ++RPS + + + Q
Sbjct: 259 LKVALLAFIGGSAPKVAVEFGRRVIPANDRPSFIEIEEALRQSKG 303
>gi|163758007|ref|ZP_02165095.1| flagellar motor protein MotA [Hoeflea phototrophica DFL-43]
gi|162284296|gb|EDQ34579.1| flagellar motor protein MotA [Hoeflea phototrophica DFL-43]
Length = 290
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 155/290 (53%), Positives = 213/290 (73%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG IT+ C++GG+ AMGG +L QPFE+VI+ GAG+GGF+M+NP KVIKD+ +
Sbjct: 1 MNMIIGFVITLGCVLGGYMAMGGKLGVLNQPFELVIIGGAGIGGFIMSNPTKVIKDTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F K + Y D L +LY LM +L+ SRNE E HID+P S +F PTVLEN
Sbjct: 61 LGEAFKNKVPKEREYLDTLSILYALMRDLRTKSRNEIEAHIDNPDESELFLLAPTVLENK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT+FICDY+R+II+GNAR +EIE LMDEEI I ++LK Y+A+S + ++ PAIGI+ A
Sbjct: 121 ELTSFICDYVRLIIIGNARPHEIEALMDEEIQTISTDRLKAYNAMSTLSDAFPAIGIIAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAMG +++SP++LG IG +L GT+LGI L Y + +P+ + IK R KQ+RLY I
Sbjct: 181 VLGVIKAMGAITESPEVLGGLIGAALVGTMLGIFLCYCVVSPVATNIKIVRTKQNRLYTI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+E+GRK + ERPSI+ V QE++ +A+
Sbjct: 241 VKQTLLAYMNGSVPQVALEHGRKTISSYERPSIDAVEQEMMNPGGGGQAA 290
>gi|114762173|ref|ZP_01441641.1| flagellar motor protein [Pelagibaca bermudensis HTCC2601]
gi|114545197|gb|EAU48200.1| flagellar motor protein [Roseovarius sp. HTCC2601]
Length = 289
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 155/289 (53%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + GG+ GG I+++ PFE++++ GA LG F++ N V+K +
Sbjct: 1 MMGIIGIVVIFGMVFGGYLLAGGKMSIILKSLPFEMMMIGGAALGTFLIGNDAGVVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F Y ++L LL+ L+ ++ S E H++ P STIF+ P +
Sbjct: 61 KDVGKVFKGAKWKPADYKELLCLLFELIRLARQ-SPVAIEEHVESPDESTIFSKYPKIQG 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ICD MR + + +++E ++D+ I+ + + ++ HA+ M + LPA+GIV
Sbjct: 120 DKIAIELICDTMRSMSMNYDDPHQVEEVLDKRIEALEHHRMHSSHALQAMADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y P ++K+ + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFAGPFAVKVKAVVEEDLHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RPS + + +
Sbjct: 240 QLIREVLVANLHNHATNICIEVGRQNTPAHFRPSFTDLEEALKNVKQAA 288
>gi|171057688|ref|YP_001790037.1| chemotaxis signal transduction protein CheY [Leptothrix cholodnii
SP-6]
gi|170775133|gb|ACB33272.1| chemotaxis signal transduction protein CheY [Leptothrix cholodnii
SP-6]
Length = 285
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 101/284 (35%), Positives = 161/284 (56%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG + I CI G + GGN ++++ P+E++ + G LG FV N +KV+K +
Sbjct: 1 MFVLIGWGVAIGCIFGVYIIHGGNISVILKALPWEMITIFGGALGAFVANNQMKVLKATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L F + ++L L+Y ++ +K E I+DP++S +F P V
Sbjct: 61 KGLGACFKGSKYSKARAMELLALIYEILQKSRKEGLMSIEKDIEDPHSSPLFQKFPVVGN 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ +T FI DY+RM++ GN ++EIE+LMD E++ +E AI+ + +LPA GIV
Sbjct: 121 DHHVTEFITDYLRMMVSGNLNAHEIESLMDSELETHHHEAHSAAAAIARLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYGFAEPLAGLLEQKIDEDGKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A M G PQ+AIE+GRKVL +ERPS + V +
Sbjct: 241 QCIKATLLASMQGYAPQIAIEFGRKVLYSTERPSFAELEAHVKK 284
>gi|329888438|ref|ZP_08267036.1| chemotaxis protein motA [Brevundimonas diminuta ATCC 11568]
gi|328846994|gb|EGF96556.1| chemotaxis protein motA [Brevundimonas diminuta ATCC 11568]
Length = 289
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 94/285 (32%), Positives = 164/285 (57%), Gaps = 2/285 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI--QPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G F GG ++ P+E++ + GAG+ F+++N L VIK +
Sbjct: 1 MFQIIGIVMLFAMVFGSFLLHGGKMATILYSLPYELMAIFGAGIAAFLISNSLPVIKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L + F + Y D+L LL+ L +K E+HI+ P S IF P VL+
Sbjct: 61 GGLGKCFAGPKWKKQDYKDLLSLLFQLTKTMKSKGVIALESHIEKPAESAIFQKYPKVLK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ T FICD +RM+ + ++IE+ M+++++ +E L P HA+ + + LPA+GIV
Sbjct: 121 DHFATDFICDTLRMMTMNLEDPHQIEDAMEKQLEKHHHEALAPAHALQTLADGLPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG++++ P++LG IG +L GT LG+ L+Y L P S++ + ++ Y
Sbjct: 181 AAVLGIIKTMGSITEPPEVLGGMIGGALVGTFLGVFLAYGLVGPFASRLNAIVEEEGAYY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
I++ L+A+++G Q+++E GR +P + +PS + + +
Sbjct: 241 KIIQSVLVAHLHGNAAQISVEIGRGDIPSTAQPSFTEMEEALAAA 285
>gi|327394203|dbj|BAK11625.1| chemotaxis protein MotA [Pantoea ananatis AJ13355]
Length = 260
Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 89/255 (34%), Positives = 148/255 (58%)
Query: 36 IVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN 95
++AGAG+G F++ N K IK + +L +F + Y D++ LLY LM ++
Sbjct: 1 MIAGAGVGAFLVGNNGKSIKKTLKALPLLFRGSKYNKAVYMDLMALLYRLMAKSRQQGML 60
Query: 96 ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIIL 155
E I+DP S IF + P +L + +L FI DY+R+++ GN ++EIE LMDEEI+
Sbjct: 61 SLERDIEDPAQSEIFANYPRILADKQLVDFITDYLRLMVSGNMNAFEIEALMDEEIETYE 120
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIIL 215
+E P +I+ +G+ LPA GIV A++G++ A+ + + LG + ++ GT LGI+L
Sbjct: 121 HECEVPAQSIAAVGDGLPAFGIVAAVMGVVHALASADRPAAELGALVAHAMVGTFLGILL 180
Query: 216 SYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+Y +PL S ++ + ++ VK L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 181 AYGFISPLASVLRQKCAETTKMMQCVKVTLLSSLNGYAPQIAVEFGRKTLYSAERPSFSE 240
Query: 276 VAQEVLQYNHNKKAS 290
+ + V + K +
Sbjct: 241 LEEHVRNAKNPAKQT 255
>gi|332531609|ref|ZP_08407506.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
gi|332038972|gb|EGI75401.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
Length = 285
Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats.
Identities = 100/284 (35%), Positives = 155/284 (54%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + +L I G F GGN IL++ PFE+ + G LG FV N KV++ +
Sbjct: 1 MIVIIGYAVAMLAIFGTFVLHGGNVGILLEALPFEMATIFGGALGAFVAGNQPKVLRATM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ + ++ Y D++ LLY ++ +K E +++P+ S +F + P V
Sbjct: 61 AQVPTVLKGSKYTKERYMDLMALLYDILQKARKEGLMAIEKDVEEPHESPLFQAHPIVGN 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F DY+RM++ GN ++EIE LMD EID E P A+ + +LPA GIV
Sbjct: 121 DHHVVEFTTDYLRMMVSGNLNAHEIETLMDSEIDTHHQEAHAPAMAVLRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P ILG I +L GT LGI+L+Y++ PL + ++ +
Sbjct: 181 AAVLGVVNTMGSVGQPPAILGGMIASALVGTFLGIMLAYAIFEPLGTLLEQKAADGTKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A M G P AIE+GRKVL +ERP + V +
Sbjct: 241 QCIKSTLLASMQGYNPATAIEFGRKVLFSTERPGFLELEAHVRK 284
>gi|254418967|ref|ZP_05032691.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
gi|196185144|gb|EDX80120.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
Length = 288
Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats.
Identities = 88/284 (30%), Positives = 165/284 (58%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G + GG +++ P E++ + GAG+ F+++N + V+K S
Sbjct: 1 MFQIIGIVLLFGLVFGSYAISGGKFEVIMHAAPHELMAIGGAGIAAFLISNSMTVVKGSL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L + F + Y D+L LL+ L +K E+HI+ P STIF P VL+
Sbjct: 61 AGLGKAFAGPKWKKQDYKDLLSLLFQLTKTMKSKGVVALESHIEKPKESTIFQKYPKVLK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E L HA+ ++ ++LPA+GIV
Sbjct: 121 DHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEHLDNAHALQNLADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P++LG IG +L GT +G+ L+Y L P +++ S ++ Y
Sbjct: 181 AAVLGVIKTMGSITEPPEVLGGMIGGALVGTFMGVFLAYGLVGPFAARLTSIINEEAAYY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+++ LIA+++G Q+++E GR +P + +PS + + +
Sbjct: 241 KMIQSVLIAHLHGNAAQISVEIGRGDIPSASQPSFAEMEEALNN 284
>gi|116694192|ref|YP_728403.1| flagellar motor component [Ralstonia eutropha H16]
gi|113528691|emb|CAJ95038.1| flagellar motor component [Ralstonia eutropha H16]
Length = 268
Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats.
Identities = 97/266 (36%), Positives = 153/266 (57%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
GG+ L QP E VI+ GA G F+ N K IK + +L +F ++ Y DV+
Sbjct: 1 MTGGHMGALYQPAEFVIIGGAAFGAFIATNTAKAIKATIKALPGLFKSSKYKKELYLDVM 60
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
LLY+L+ ++ E I DP S++F+ P +L + + F+ DY+RM++ GN
Sbjct: 61 SLLYVLLSKARREGILFLEKEIADPAASSVFSQYPRILSDPVVMEFLTDYLRMMVNGNMN 120
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
++EIE LMD EI+ +E P HA+S +G++LPA GIV A++G++ A+G+ P LG
Sbjct: 121 AFEIEALMDHEIETFRHEAEIPAHALSRVGDALPAFGIVAAVMGVVHALGSADLPPAELG 180
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
I ++ GT LGI+L+Y +PL ++I+ + ++Y +K L+A +NG P VA+E
Sbjct: 181 ALIAHAMVGTFLGILLAYGFVSPLAARIELQVSENVKVYECIKVVLLASLNGYAPLVAVE 240
Query: 260 YGRKVLPLSERPSIEIVAQEVLQYNH 285
+GRKVL + RPS + V +
Sbjct: 241 FGRKVLYSTVRPSFLELDDHVREVKS 266
>gi|293604984|ref|ZP_06687381.1| chemotaxis MotA protein [Achromobacter piechaudii ATCC 43553]
gi|292816812|gb|EFF75896.1| chemotaxis MotA protein [Achromobacter piechaudii ATCC 43553]
Length = 263
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 101/263 (38%), Positives = 158/263 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + I+ ++G F A+GG+ L QPFE+ ++ GA G F+ N K + +
Sbjct: 1 MLIVIGFLVVIVSVVGSFIALGGHLGALYQPFELTLIFGAAFGAFLAGNSKKSLMLVKKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + +D Y +++ LLY+L+ ++ E+HI+DP +S IF P + ++
Sbjct: 61 LPDALKSSRYSKDVYMELMALLYVLLNKARREGLMAIESHIEDPASSPIFGEYPRIAKDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI DY+R++I GN S+EIE LMDEEI+ +E+ P HA+ M + LPA GIV A
Sbjct: 121 KLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPAHALQQMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ + Q P ILG I ++ GT LGI+L+Y PL S+++ + ++
Sbjct: 181 VLGVIKALAAVDQPPAILGDLISKAMVGTFLGILLAYGFVGPLASRVERRNDEAMKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRK 263
+K L+A MNG PQ+A+E+GRK
Sbjct: 241 IKTTLLASMNGYPPQLAVEFGRK 263
>gi|269138689|ref|YP_003295390.1| flagellar motor protein [Edwardsiella tarda EIB202]
gi|267984350|gb|ACY84179.1| flagellar motor protein [Edwardsiella tarda EIB202]
gi|304558695|gb|ADM41359.1| Flagellar motor rotation protein MotA [Edwardsiella tarda FL6-60]
Length = 269
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 94/263 (35%), Positives = 155/263 (58%)
Query: 28 LIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMY 87
+ QP E++I+ GAG+G F++ N K IK + +L ++ + Y DV+ L+Y L+
Sbjct: 1 MYQPSELLIIGGAGIGAFIVGNNGKAIKSTLRTLPKLARGSKYNKALYMDVMGLMYQLLA 60
Query: 88 NLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLM 147
++ E I+DP S IF++ P ++ +N L FI DYMR+II GN ++EIE+LM
Sbjct: 61 KSRQQGMLSLERDIEDPKASEIFSNYPRLIADNTLIEFITDYMRLIISGNMNAFEIESLM 120
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLT 207
DEEI+ E P +++ +G+SLPA GIV A++G++ A+ + + LG I ++
Sbjct: 121 DEEIETFEQEAEVPAGSLAAVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMV 180
Query: 208 GTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPL 267
GT LGI+L+Y +PL S ++ + ++ +K L++ +NG PQ+A+E+GRK L
Sbjct: 181 GTFLGILLAYGFISPLASLMRQKSAETTKMMHCIKTTLLSSLNGYAPQIAVEFGRKTLYS 240
Query: 268 SERPSIEIVAQEVLQYNHNKKAS 290
+ERPS + + V Q K +
Sbjct: 241 TERPSFIELEEHVRQVKTPAKQA 263
>gi|254511948|ref|ZP_05124015.1| chemotaxis protein MotA [Rhodobacteraceae bacterium KLH11]
gi|221535659|gb|EEE38647.1| chemotaxis protein MotA [Rhodobacteraceae bacterium KLH11]
Length = 289
Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 82/289 (28%), Positives = 160/289 (55%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG+ + + GG+ A GG I+++ P+E++++ GA +G F+++N + +K +
Sbjct: 1 MIGLIGIAVIFAMVFGGYLAAGGKMAIIMKSLPYEMMMIGGAAVGAFMISNDMGGVKHTA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + Y D+L LL+ L+ + + E E HI++P NS++F++ P +
Sbjct: 61 KDIGKVFKGPKWKPEDYRDLLCLLFSLIRIAR-ANPVEVEQHIEEPENSSLFSAYPKIQA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ ++ + + HA+ + + LPA+GIV
Sbjct: 120 DKEAVDLICDTMRSAAMNYDDPHQVEEVLEKRMEANFHHAMHSSHALQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ Q P++LG IG +L GT LG+ L+Y L P ++K+ + + Y
Sbjct: 180 AAVLGVIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAGKLKTVVEEDNHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++K+ L+A ++ + IE GR+ P RP + + +
Sbjct: 240 QLIKEVLVANLHNHNAAMCIEVGRQNTPTHNRPGFSELEDALKELKQAA 288
>gi|73539428|ref|YP_299795.1| chemotaxis MotA protein [Ralstonia eutropha JMP134]
gi|72122765|gb|AAZ64951.1| chemotaxis MotA protein [Ralstonia eutropha JMP134]
Length = 287
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/285 (34%), Positives = 164/285 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + ++GG+ GG+ L QP E+VI+ GA G F+ N K +K + +
Sbjct: 1 MLVVLGYIVVVAAVLGGYAMTGGHMGALYQPAELVIIGGAAAGAFIATNTTKALKATLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F ++ Y DV+ LLY+L+ ++ E I DP S++F+ P +L +
Sbjct: 61 LPGLFKSSKYKKELYLDVMSLLYVLLSKARREGILFLEKEIADPAASSVFSQYPRILSDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+RM++ GN ++EIE LMD EI+ +E P HA+S +G++LPA GIV A
Sbjct: 121 VVMEFLTDYLRMMVNGNMNAFEIEALMDHEIETFRHEAEIPAHALSRVGDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ + P LG I ++ GT LGI+L+Y +PL ++I+ + ++Y
Sbjct: 181 VMGVVHALASADLPPAELGALIAHAMVGTFLGILLAYGFVSPLAARIELQVSENVKVYEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A +NG P VA+E+GRKVL + RPS + V +
Sbjct: 241 IKVVLLASLNGYAPLVAVEFGRKVLYSTVRPSFLELDDHVREVKS 285
>gi|149203115|ref|ZP_01880086.1| flagellar motor protein MotA [Roseovarius sp. TM1035]
gi|149143661|gb|EDM31697.1| flagellar motor protein MotA [Roseovarius sp. TM1035]
Length = 289
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 87/289 (30%), Positives = 157/289 (54%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + + GG+ A GG ++++ PFE +++ GA +G F+++N IK +
Sbjct: 1 MVGIIGIVVIFVMVFGGYVAAGGKLGLILKALPFEFMMIGGAAVGAFLISNDAPAIKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F Y D+L LL+ L+ ++ + E HI+ P +S IF+ P +L
Sbjct: 61 GDIAKVFKGPKWKPQDYRDLLCLLFELIRLGRQ-NPIAVEEHIESPNDSAIFSKYPKILA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E I D +R + +++E ++++ I+ L+ L HA+ M + LPA+GIV
Sbjct: 120 DAEAVALISDTLRSASMNYDDPHQVEEVLEKRIEANLHHALHSSHALQTMADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P+ILG IG +L GT LG+ LSY L P +++K + Y
Sbjct: 180 AAVLGVIKTMASIDQPPEILGKMIGGALVGTFLGVFLSYGLVGPFAAKVKDVVEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P +RPS + + + +
Sbjct: 240 QLIREVLVANLHNHATNICIEVGRQNTPNHKRPSFNELEEALKSLKQDA 288
>gi|332284001|ref|YP_004415912.1| flagellar motor protein MotA [Pusillimonas sp. T7-7]
gi|330427954|gb|AEC19288.1| flagellar motor protein MotA [Pusillimonas sp. T7-7]
Length = 290
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 106/290 (36%), Positives = 166/290 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + + G F +GG+ L QPFE V++AGA +G ++ ++ K +K S
Sbjct: 1 MFIILGFLIVFISVFGSFVMLGGHLGALYQPFEFVLIAGAAIGAYIASSSSKSVKLLFSS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F G++ Y +++ LLY+L+ ++ E+ I++P +S IF P +L +
Sbjct: 61 LPIAFRKSPYGKELYMELMALLYVLLNKARRDGLMSIESDIEEPESSPIFADYPRILRDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DYMR++I GN S+EIE LMD+EI+ E+ P +A+ + ++LPA GIV A
Sbjct: 121 NLMEFITDYMRLMISGNMSSFEIETLMDQEIEAHFQERSVPSNALRAVADALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKA+ ++ Q P IL I ++ GT LG++L+Y P S I+ + ++
Sbjct: 181 VLGVIKALASVDQPPAILADLISKAMVGTFLGVLLAYGFVAPFASSIERRSVASMKVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+K L+A MNG PQ+A+E+GRKVL RPS + V Q K +
Sbjct: 241 IKVTLLASMNGYPPQLAVEFGRKVLYSYARPSFMELEDHVRQTRSTAKKA 290
>gi|254488786|ref|ZP_05101991.1| chemotaxis MotA protein [Roseobacter sp. GAI101]
gi|214045655|gb|EEB86293.1| chemotaxis MotA protein [Roseobacter sp. GAI101]
Length = 289
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 155/289 (53%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + GG+ A GG I+++ PFE ++ GA G F+++N L +K +
Sbjct: 1 MIGIVGIITIFVMVFGGYLAAGGKMGIILKSLPFEFTMIGGAAAGAFLISNDLPAVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + Y D+L LL+ L+ ++ + E E HI++P STIF+ P +L
Sbjct: 61 KDVGKVFKGPKWKHEDYRDLLCLLFELVRLARQ-NPIEIEPHIENPMESTIFSKYPKILT 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E ICD MR + +++E ++++ ++ L L HA+ + + LPA+GIV
Sbjct: 120 DAEAIAMICDTMRSASMNYDDPHQVEEVLEKRMEANLEHSLHSSHALQTIADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P+ILG IG +L GT LG+ L+Y L P +++ + Y
Sbjct: 180 AAVLGVIKTMASIDQPPEILGKLIGGALVGTFLGVFLAYGLVGPFAAKVADVTKEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ L+A ++ + IE GR+ P RP+ + + +
Sbjct: 240 NLIREVLVANLHNHATNICIEVGRQNTPSHCRPTFSELEEAIKALKQGA 288
>gi|239817127|ref|YP_002946037.1| chemotaxis MotA protein [Variovorax paradoxus S110]
gi|239803704|gb|ACS20771.1| chemotaxis MotA protein [Variovorax paradoxus S110]
Length = 286
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 100/273 (36%), Positives = 159/273 (58%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+ GG+ MGG+ +L QP E++++ GA LG F+ N K IK + L + +
Sbjct: 13 AVFGGYALMGGHFGVLFQPVELLMIGGAALGAFLAGNNGKTIKATLKELPLLLRSSKHNR 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
Y D+L LLY L+ +K + E+ ++DP S IF P +L + + F+CDY+R+
Sbjct: 73 QLYLDLLALLYELLAKARKEGMMKLESDVEDPAQSEIFRRYPEILADAGVMEFLCDYLRL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I GN ++EIE LMD EI+ I +E P H++S + ++LPA+GIV A++G++ A+G+
Sbjct: 133 VISGNTDAFEIEALMDHEIETIKHEAEMPVHSLSRVSDALPALGIVAAVMGVVHALGSAD 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
P +G I ++ GT LG++L+Y +PL S I + +LY K L+A +NG
Sbjct: 193 LPPSEMGALIAHAMVGTFLGVLLAYGFVSPLASLIDQKVSEGMKLYQCTKVTLLASLNGY 252
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
PQ+A+E+GRKVL +ERPS + V +
Sbjct: 253 APQLAVEFGRKVLFSTERPSFTELDSHVREVKA 285
>gi|15600147|ref|NP_253641.1| flagellar motor protein MotA [Pseudomonas aeruginosa PAO1]
gi|218894049|ref|YP_002442918.1| flagellar motor protein MotA [Pseudomonas aeruginosa LESB58]
gi|254238331|ref|ZP_04931654.1| chemotaxis protein MotA [Pseudomonas aeruginosa C3719]
gi|9951235|gb|AAG08339.1|AE004908_5 chemotaxis protein MotA [Pseudomonas aeruginosa PAO1]
gi|126170262|gb|EAZ55773.1| chemotaxis protein MotA [Pseudomonas aeruginosa C3719]
gi|218774277|emb|CAW30094.1| chemotaxis protein MotA [Pseudomonas aeruginosa LESB58]
Length = 283
Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 154/282 (54%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS IIG+ + ++GGF GG +IQPFE++I+ GA LG F+ +NP
Sbjct: 1 MSKIIGIIVVFASVLGGFLLSGGKIGAIIQPFEVLIIGGAALGAFLQSNPGSTFMVVLKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++F + Q Y +VL +LY ++ ++ E I+DP S IF+ P VL++
Sbjct: 61 APKMFSNR-FTQTYYLEVLGMLYEILNKSRREGMMAIEADIEDPAASPIFSKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP GIV A
Sbjct: 120 RMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQSP-KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M L + +G + +L GT LGI+ +Y PL ++ ++ L+
Sbjct: 180 VLGIVITMALLGEGSQAEIGHHVAAALVGTFLGILAAYGFVGPLAGALEHDAKEELNLFE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K L+A +G P +A+E+GRKVL + RP+ + Q V
Sbjct: 240 AIKACLVASASGMPPSLAVEFGRKVLLPAHRPTFAELEQAVR 281
>gi|83859896|ref|ZP_00953416.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
gi|83852255|gb|EAP90109.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
Length = 288
Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 91/281 (32%), Positives = 165/281 (58%), Gaps = 2/281 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI--QPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + GGF GG+ I++ PFE++++ GA +G F+++N L I +
Sbjct: 1 MFQIIGIVVLFGMVFGGFTLAGGHFDIIVAALPFELMMIGGAAIGAFLISNSLGTITKTA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ G+ Y D+L LL+ L +K E+HI++P++S+IF++ P +++
Sbjct: 61 GDFAKLISGPKWGKQDYMDLLTLLFQLTKTMKTKGVIALESHIENPHDSSIFSAYPKIMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++I+ +E P HA+ M ++LPA+GIV
Sbjct: 121 DHFAIDFICDTLRMMTMNLEDPHQVEDAMEKQIEKHHHEAATPAHALQSMADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG + P +LG IG +L GT LG+ L+Y L P +++ ++ Y
Sbjct: 181 AAVLGIIKTMGAIDSPPTVLGAKIGSALVGTFLGVFLAYGLVGPFAARLNEIYEEEGAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
I++ L+A+++G Q+++E GR +P S +PS + +
Sbjct: 241 KIIQAVLVAHLHGNAAQISVEIGRGNVPSSFQPSFAELEEA 281
>gi|260574391|ref|ZP_05842395.1| flagellar motor protein MotA [Rhodobacter sp. SW2]
gi|259023287|gb|EEW26579.1| flagellar motor protein MotA [Rhodobacter sp. SW2]
Length = 289
Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats.
Identities = 83/289 (28%), Positives = 159/289 (55%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI--QPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+GL + + + GG+ GG+ +++ PFE++I+ GA +G F++AN L +K +
Sbjct: 1 MIGIVGLLVIFIMVFGGYMLAGGHIMVVLAALPFEMIIIGGAAVGTFLLANDLATVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F Y D+L LL+ L+ + + E HI++P S++F P + +
Sbjct: 61 KDIGKVFKGPKWKPADYRDLLCLLFELIRIAR-ANPVGLEEHIENPAESSVFGRYPKIQK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD +R + +++E ++D+ ++ L HA+ + ++LPA+GIV
Sbjct: 120 DHESVELICDTLRAASMNYDDPHQVEEVLDKRMETSHTHALHTSHALQSIADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG + Q P ILG IG +L GT LG+ L+Y + P ++++++ + Y
Sbjct: 180 AAVLGVIKTMGAIDQPPAILGKMIGSALVGTFLGVFLAYGIVGPFSTRVQAVVEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+++++ L+A ++ + IE GR+ P RPS + + + +
Sbjct: 240 MLIREVLVANLHNHPANICIEVGRQNTPHHMRPSFADLEEALRSLKQDA 288
>gi|146278782|ref|YP_001168941.1| flagellar motor protein MotA [Rhodobacter sphaeroides ATCC 17025]
gi|145557023|gb|ABP71636.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 289
Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats.
Identities = 83/289 (28%), Positives = 158/289 (54%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + + GG+ GG I+++ PFE++++ GA +G F+++N L +K +
Sbjct: 1 MFGIVGVIVLFVMVFGGYMMAGGKIGIILKALPFEMIMIGGAAVGSFLLSNDLFAVKQTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F Y D+L LL+ L+ + K + E HI++P S +F+ P +
Sbjct: 61 KDVGKVFKGPRWKPADYRDLLCLLFELVR-IAKVNPVGLEEHIENPEASPVFSRYPKIQH 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+++ ICD +R + +++E ++D+ ++ + L HA+ M ++LPA+GIV
Sbjct: 120 DHDAIELICDTLRAASMNYDDPHQVEEVLDKRVEKAQHHALHSSHALQSMADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P+ILG IG +L GT LG+ L+Y L P +++++ + Y
Sbjct: 180 AAVLGVIKTMSSIDQPPEILGKMIGGALVGTFLGVFLAYGLVGPFATRVRAVIEEDGHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++++ LIA ++ + IE GR+ P RPS + + +
Sbjct: 240 NLIREVLIANLHNHPANMCIEVGRQNTPHHVRPSFTDLEEAIRALKQEA 288
>gi|307546934|ref|YP_003899413.1| flagellar motor protein MotA [Halomonas elongata DSM 2581]
gi|307218958|emb|CBV44228.1| flagellar motor protein MotA [Halomonas elongata DSM 2581]
Length = 290
Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats.
Identities = 91/290 (31%), Positives = 161/290 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I +L + GGF GG+ L QP E++++ GAG+G FV +N K +K S
Sbjct: 1 MLIPIGYLIVLLSVFGGFVLAGGSLGPLFQPTELLMIGGAGIGAFVASNNGKALKASFRI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K + Y D++ L Y ++ +++ E ID+P S +F P +L +
Sbjct: 61 IPRLRRSKKYDKAMYLDLMALQYKILTKIRRDGMLGIERDIDNPQESPLFNEHPRLLADP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ TF+ DY+R+++ G+ E++ LM EI+ E P AI +G+++PA GIV A
Sbjct: 121 MIMTFLTDYLRLMVSGSMDPMELDELMLHEIEAFEQEAHIPIDAIGRIGDAMPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++KA+ ++ P+ +G I +L GT LGI++ Y PL S+I+ + ++
Sbjct: 181 VMGVVKALSTVAAGPEQMGQMIAHALVGTFLGILIGYGFIIPLASRIERQAKEAEKMLHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
++ L+A ++G PQ+A+E+GRK L ++RPS + + + Q ++
Sbjct: 241 IRVTLLANLHGYAPQLAVEFGRKALHTADRPSFTEMEEYMRQAKPVAGSA 290
>gi|152986658|ref|YP_001351002.1| flagellar motor protein MotA [Pseudomonas aeruginosa PA7]
gi|150961816|gb|ABR83841.1| chemotaxis protein MotA [Pseudomonas aeruginosa PA7]
Length = 283
Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 155/282 (54%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS IIG+ + ++GG+ GG +IQPFE++I+ GA LG F+ ANP
Sbjct: 1 MSKIIGIIVVFASVLGGYLLSGGKIGAIIQPFEVLIIGGAALGAFLQANPGNTFMVVLKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++FG++ Q Y +VL +LY ++ ++ E I+DP S IF+ P VL++
Sbjct: 61 APKMFGHR-FTQTFYLEVLGMLYEILNKSRREGMMAIEADIEDPSASPIFSKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP GIV A
Sbjct: 120 RMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQSP-KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M L + +G + +L GT LGI+ +Y PL ++ ++ L+
Sbjct: 180 VLGIVITMALLGEGSQAEIGHHVAAALVGTFLGILAAYGFVGPLAGALEHDAKEELNLFE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K L+A +G P +A+E+GRKVL RP+ + Q V
Sbjct: 240 AIKACLVASASGMPPSLAVEFGRKVLLPGHRPTFAELEQAVR 281
>gi|254295278|ref|YP_003061301.1| flagellar motor protein MotA [Hirschia baltica ATCC 49814]
gi|254043809|gb|ACT60604.1| chemotaxis MotA protein [Hirschia baltica ATCC 49814]
Length = 288
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 89/285 (31%), Positives = 164/285 (57%), Gaps = 2/285 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + GGF GG+ ++I+ PFE++++ GAG+G F+++N + IK +
Sbjct: 1 MFQIIGLLVVFGMVFGGFALAGGHFDVIIKAAPFEMMMIGGAGVGSFLISNSMGTIKGAM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ Y D+L LL++L +K E HI++P +S+IF + P +L+
Sbjct: 61 GGFGKALSGPKWKAKDYQDLLTLLFVLTKTMKTKGVVAIEPHIENPKDSSIFQNYPKILK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ ICD +RM+ + +++E+ ++++I+ E HA+ ++ ++ PA+GIV
Sbjct: 121 DHFACDLICDTLRMMTMNMDDPHQVEDAIEKQIEKHHSEAHGAAHAVQNLADAFPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LGIIK MG +SQ P+ LG IG +L GT LGI ++Y + P +++ ++ + Y
Sbjct: 181 AAVLGIIKTMGAISQPPEYLGKLIGSALVGTFLGIFIAYGIVGPFAARMGEVLDEEGQFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
I+K L+++++G Q+++E GR +P S +PS + + +
Sbjct: 241 KIIKDVLVSHLHGNAAQISVELGRGSVPTSCQPSFTQMEEALNAA 285
>gi|194364217|ref|YP_002026827.1| flagellar motor protein MotA [Stenotrophomonas maltophilia R551-3]
gi|194347021|gb|ACF50144.1| flagellar motor protein MotA [Stenotrophomonas maltophilia R551-3]
Length = 284
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 90/284 (31%), Positives = 155/284 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I+ ++GG+ G L QP+E+VI+ GA LG F++ P K +K + +
Sbjct: 1 MLIIVGFLVVIISVLGGYLGAHGRLGALWQPYELVIIGGAALGAFLVGTPAKTVKQTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F Q Y DVL L+Y L+ ++ E+H++ P S +F + P V ++
Sbjct: 61 MVGVFKGPRYKQQDYIDVLSLVYELLNKARREGFMALEDHVERPAESALFGNYPKVQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R++I N +E+E L++ E++ E + P ++ + + LP GIV A
Sbjct: 121 HLIDFITDCLRLMIGSNIEPHELEPLLELELEKHHAEAMAPSQVLTKVADGLPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ +G + +L GT LGI+L Y P+ S +++ + R+Y
Sbjct: 181 VLGIVITMGSIGGDIVEVGGHVAGALVGTFLGILLGYGFVGPMASAMEARAEQDSRIYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
VK AL+A + G P++A+E+ RK LP + RP+ Q +
Sbjct: 241 VKTALLACLRGYNPKIALEFARKTLPSNVRPAFSDFEQHLKTVK 284
>gi|330501612|ref|YP_004378481.1| flagellar motor protein MotA [Pseudomonas mendocina NK-01]
gi|328915898|gb|AEB56729.1| flagellar motor protein MotA [Pseudomonas mendocina NK-01]
Length = 283
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 100/282 (35%), Positives = 157/282 (55%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + C+ GGF GG L+ PFE++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVFGCVFGGFMLSGGKLMALVHPFEVMIIGGAALGAFLQANPGSMFMTVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F Y +VLKLLY ++ ++ E ++DP S IF+ P VL++
Sbjct: 61 SLSMF-GSRFTHAYYLEVLKLLYEILNKSRREGMMAIEADVEDPNASPIFSKYPGVLKDA 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T FICDY+R++ GN +E+E L D E+ + E P HA++ + + +PA+GIV A
Sbjct: 120 RMTAFICDYLRIMSSGNMAPHELEGLFDMELASLKEEVEHPAHAVAKVADGMPAMGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M L++ +G +G +L GT LGI+ SY PL+ ++ ++ LY
Sbjct: 180 VLGIVITMSILAEADNAQIGEKVGTALVGTFLGILASYGFFGPLSGALEHDAKEELNLYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K L+A +G P +A+E+GRKVL + RPS + Q +
Sbjct: 240 AIKATLVASASGMPPTLAVEFGRKVLYPAHRPSFSELEQAMR 281
>gi|206890450|ref|YP_002248654.1| lateral flagellar motor protein MotA [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742388|gb|ACI21445.1| lateral flagellar motor protein MotA [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 288
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 83/288 (28%), Positives = 159/288 (55%), Gaps = 1/288 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG + + I+GG+ GN +L QP E++I+ GA +G V+A+P V++
Sbjct: 1 MLVVIGGLVVLGSIVGGYLLEKGNLSVLFQPAEVLIIFGAAIGALVIASPPHVLRGVIKG 60
Query: 61 LLEIFGY-KALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+ K + Y D L LL L ++K E +++P NSTIF+ P L+N
Sbjct: 61 TITTITGAKGYSKRDYMDTLLLLSELFTKIRKEGLISIEQDVEEPENSTIFSKYPKFLKN 120
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ + D +R ++ YE+E+++D EI+ + + P + + +SLP +GIV
Sbjct: 121 HHAMALLTDTLRTVMTTTVSPYELESILDSEIETLHETESGPVRNLLTIADSLPGLGIVA 180
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A+LG++ MG + + P+++G ++G +L GT +G+++ Y PL +++++ +
Sbjct: 181 AVLGVVLTMGKMKEPPEVIGHSVGAALVGTFMGVLMCYGFVGPLAKRLEASVNHEKEYLQ 240
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
I+K AL+A+++G+ PQ+A+E+ R+ +P RP+ + +E+ +
Sbjct: 241 IIKAALVAFVSGSAPQIAVEFARRTIPPHLRPTFHELEEEIRALKSGR 288
>gi|94970508|ref|YP_592556.1| chemotaxis protein [Candidatus Koribacter versatilis Ellin345]
gi|94552558|gb|ABF42482.1| chemotaxis protein [Candidatus Koribacter versatilis Ellin345]
Length = 301
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 159/282 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + C+IGGF G +L+QP E++I+ GA G ++ANP++++K
Sbjct: 1 MFAIIGIVVVFGCVIGGFLMEKGQIMVLLQPAELLIIGGAAAGTILVANPMRIVKKIVSG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LL + Q Y D LK++Y L+ ++ E+ I++P S IFT + ++
Sbjct: 61 LLGVLKGSKYNQTAYVDSLKMMYELLNKARRQGLVALESDIEEPDKSPIFTKYKSFTSDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+CD MRM + G ++++ ++D ++++ E +P +++ + +SLP +GIV A
Sbjct: 121 HVRDFVCDTMRMSVTGGVDPFDVDQMIDTDMEVHHAEITEPVASLTTVADSLPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG L P+ +G + +L GT LGI+L Y + PL S + T ++H Y +
Sbjct: 181 VLGVVITMGALGGPPEEIGHKVAAALVGTFLGILLCYGMVGPLASNMAKTADEEHAYYGV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
++ +IA+M G P +AIE GR+ +P RPS V + +
Sbjct: 241 LRVVMIAFMKGISPLLAIEMGRRAIPGYVRPSFADVEKACRE 282
>gi|146305659|ref|YP_001186124.1| flagellar motor protein MotA [Pseudomonas mendocina ymp]
gi|145573860|gb|ABP83392.1| Flagellar motor component-like protein [Pseudomonas mendocina ymp]
Length = 283
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/282 (35%), Positives = 157/282 (55%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + C+ GGF GG L+ PFE++I+ GA LGGF+ ANP +
Sbjct: 1 MVKIIGIVVVFACVFGGFVLSGGQLMALVHPFEVLIIGGAALGGFLQANPGSMFMTVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F Y +VLKLLY ++ ++ E ++DP S IF+ P VL++
Sbjct: 61 SLSMF-GTRFTHTYYLEVLKLLYEILNKSRREGMMAIEADVEDPNASPIFSKYPGVLKDA 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T FICDY+R++ GN +E+E L D E+ + E P HA++ + + LPA+GIV A
Sbjct: 120 RMTAFICDYLRIMSSGNMAPHELEGLFDMELASLKEEVEHPAHAVAKIADGLPAMGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M L++ +G + +L GT LGI+ SY PL++ ++ ++ LY
Sbjct: 180 VLGIVITMSILAEADNAQIGEKVATALVGTFLGILASYGFFGPLSNALEHDAKEELNLYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K L+A +G P +A+E+GRKVL + RPS + Q +
Sbjct: 240 AIKATLVASASGMPPSLAVEFGRKVLFPAHRPSFSELEQAMR 281
>gi|163850085|ref|YP_001638128.1| chemotaxis MotA protein [Methylobacterium extorquens PA1]
gi|218528688|ref|YP_002419504.1| chemotaxis MotA protein [Methylobacterium chloromethanicum CM4]
gi|240137218|ref|YP_002961687.1| Chemotaxis protein MotA (Motility protein A) [Methylobacterium
extorquens AM1]
gi|254559230|ref|YP_003066325.1| chemotaxis protein MotA [Methylobacterium extorquens DM4]
gi|163661690|gb|ABY29057.1| chemotaxis MotA protein [Methylobacterium extorquens PA1]
gi|218520991|gb|ACK81576.1| chemotaxis MotA protein [Methylobacterium chloromethanicum CM4]
gi|240007184|gb|ACS38410.1| Chemotaxis protein MotA (Motility protein A) [Methylobacterium
extorquens AM1]
gi|254266508|emb|CAX22272.1| Chemotaxis protein MotA (Motility protein A) [Methylobacterium
extorquens DM4]
Length = 291
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 144/290 (49%), Positives = 197/290 (67%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL I I C++GGF AMGG+ ++ QP+E VI+ G G FV+ANP+K + DSG +
Sbjct: 1 MGILVGLVIAIGCMLGGFVAMGGHLIVIWQPWEFVIIFGMAAGTFVIANPMKTVVDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F K + + +L LL+ LM +LK RNE E H DDP NS IF + P V ++
Sbjct: 61 TMEAFTNKGPKRQDFLSLLGLLHALMRDLKTKPRNEVETHFDDPANSEIFKNYPEVTKDQ 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICDY R+I++GNARS+EIE LM+EEI KLKPY AI+ + E+LPA+GIV A
Sbjct: 121 DLVLFICDYCRLILIGNARSHEIEALMEEEIGTHKKYKLKPYAAINTVAEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+KAMG L QSP+ILG IG +L GT +G+ SY + PL +IK R KQ +Y I
Sbjct: 181 VLGIVKAMGALDQSPQILGGLIGAALVGTFIGVFASYGMLAPLAVKIKGVREKQCSVYTI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK++LIAYMNGA+PQVAIE+GRK + ++RP+I+ V + + A+
Sbjct: 241 VKQSLIAYMNGALPQVAIEHGRKGIAGADRPTIDEVESATVPGARAEPAA 290
>gi|255261774|ref|ZP_05341116.1| chemotaxis protein MotA [Thalassiobium sp. R2A62]
gi|255104109|gb|EET46783.1| chemotaxis protein MotA [Thalassiobium sp. R2A62]
Length = 289
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 87/287 (30%), Positives = 153/287 (53%), Gaps = 3/287 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M ++G+ I + + GG+ GG I+++ PFE++++ GA G FV++N IK +
Sbjct: 1 MIGLVGIVIIFVMVFGGYILAGGKMGIILKSLPFEMIMIGGAAAGAFVLSNDKASIKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F D Y D+L LL+ L+ + + E HI+ P S IF +L+
Sbjct: 61 KDLQKVFKGPKWKPDDYRDLLCLLFELIRIARADA-IALEVHIEAPEKSKIFAKYENILQ 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ E + ICD +R + +++E ++D I+ L K+ HA+ + + LPA+GIV
Sbjct: 120 DQEAVSLICDTLRTGSMNYDDPHQVEEVLDNRIEESLSRKMHSTHALQTIADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P++LG IG +L GT LG+ L+Y P +++K+ + Y
Sbjct: 180 AAVLGVIKTMASIDQPPEVLGKMIGGALVGTFLGVFLAYGFVGPFATKVKAVIEEDAHFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++++ LIA ++ + IE GR+ P RPS + + +
Sbjct: 240 QLIREVLIANLHKHATNICIEVGRQNTPNHVRPSYSELEDALKETKK 286
>gi|107104053|ref|ZP_01367971.1| hypothetical protein PaerPA_01005126 [Pseudomonas aeruginosa PACS2]
Length = 283
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 154/282 (54%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS IIG+ + ++GGF GG +IQPFE++I+ GA LG F+ +NP
Sbjct: 1 MSKIIGIIVVFASVLGGFLLSGGKIGAIIQPFEVLIIGGAALGAFLQSNPGSTFMVVLKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++F + Q Y +VL +LY ++ ++ E I+DP S IF+ P VL++
Sbjct: 61 APKMFSNR-FTQTYYLEVLGMLYEILNKSRREGMMAIEADIEDPAASPIFSKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP GIV A
Sbjct: 120 RMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQSP-KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M L + +G + +L GT LGI+ +Y PL ++ ++ ++
Sbjct: 180 VLGIVITMALLGEGSQAEIGHHVAAALVGTFLGILAAYGFVGPLAVALEHDAKEELNMFE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K L+A +G P +A+E+GRKVL + RP+ + Q V
Sbjct: 240 AIKACLVASASGMPPSLAVEFGRKVLLPAHRPTFAELEQAVR 281
>gi|4928700|gb|AAD33690.1|AF136403_2 RpmA [Pseudomonas aeruginosa]
Length = 283
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 90/274 (32%), Positives = 147/274 (53%), Gaps = 3/274 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS IIG+ + ++GGF GG +IQPFE++I+ GA LG F+ +NP
Sbjct: 1 MSKIIGIIVVFASVLGGFLLSGGKIGAIIQPFEVLIIGGAALGAFLQSNPGSTFMVVLKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++F + Q Y +VL +LY ++ ++ E I+DP S IF+ P VL++
Sbjct: 61 APKMFSNR-FTQTYYLEVLGMLYEILNKSRREGMMAIEADIEDPAASPIFSKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP GIV A
Sbjct: 120 RMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFGIVAA 179
Query: 181 ILGIIKAM--GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LGI+ M Q +I GT LGI+ +Y PL ++ ++ L+
Sbjct: 180 VLGIVITMAFAWRRQQAEIGHHVRRRPWWGTFLGILAAYGFVGPLAGALEHDAKEELNLF 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+K L+A +G P +A+E+GRKVL + RP+
Sbjct: 240 EAIKACLVASASGMPPSLAVEFGRKVLLPAHRPT 273
>gi|104783885|ref|YP_610383.1| flagellar motor protein MotA [Pseudomonas entomophila L48]
gi|95112872|emb|CAK17600.1| Putative flagellar motor MotA protein [Pseudomonas entomophila L48]
Length = 283
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 151/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP +
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTMHVIKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+DP S IF P V+ +
Sbjct: 61 SLKMF-GTRFTHTFYLEVLGLVYEILNKSRREGMMAIEGDIEDPAASPIFAKYPAVMGDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T FICDY+R++ GN +E+E L D E+ + E P HA++ + + +P GIV A
Sbjct: 120 RMTAFICDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L K +G +G +L GT GI+ +Y PL + ++ ++ +Y
Sbjct: 180 VLGIVVTMASLGDGDQKSIGLHVGAALVGTFFGILAAYGFFGPLANALRHDAKEELNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 AIKASLVASASGMPPSLAVEFGRKVLYPGHRPSFAELEQAVR 281
>gi|188579890|ref|YP_001923335.1| chemotaxis MotA protein [Methylobacterium populi BJ001]
gi|179343388|gb|ACB78800.1| chemotaxis MotA protein [Methylobacterium populi BJ001]
Length = 291
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 144/290 (49%), Positives = 195/290 (67%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL I I C++GGF AMGG+ ++ QP+E VI+ G G FV+ANPLKV+ DSG +
Sbjct: 1 MGILVGLVIAIGCMLGGFVAMGGHLIVIWQPWEFVIIGGMAAGTFVIANPLKVVMDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F K + + +L LL+ LM LK RNE E H DDP NS IF + P V ++
Sbjct: 61 TMEAFTNKGPKRQDFLSLLGLLHALMRELKTKPRNEVETHFDDPANSEIFKNYPDVTKDQ 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICDY R+I++GNARS+EIE LM+EEI +LKPY AI+ + E+LPA+GIV A
Sbjct: 121 DLLLFICDYCRLILIGNARSHEIEALMEEEIGTHKKYRLKPYAAINTVAEALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+KAMG L QSP+ILG IG +L GT G+ SY + PL ++K R KQ Y I
Sbjct: 181 VLGIVKAMGALDQSPQILGGLIGAALVGTFFGVFASYGVLAPLAIKVKGVREKQCAPYTI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK++LIAYMNGA+PQVAIE+GRK + ++RP+I+ V + + A+
Sbjct: 241 VKQSLIAYMNGALPQVAIEHGRKGIAGADRPTIDEVESATVPGARAEPAA 290
>gi|116053103|ref|YP_793422.1| flagellar motor protein MotA [Pseudomonas aeruginosa UCBPP-PA14]
gi|254244158|ref|ZP_04937480.1| chemotaxis protein MotA [Pseudomonas aeruginosa 2192]
gi|296391794|ref|ZP_06881269.1| flagellar motor protein MotA [Pseudomonas aeruginosa PAb1]
gi|313109956|ref|ZP_07795883.1| chemotaxis protein MotA [Pseudomonas aeruginosa 39016]
gi|115588324|gb|ABJ14339.1| chemotaxis protein MotA [Pseudomonas aeruginosa UCBPP-PA14]
gi|126197536|gb|EAZ61599.1| chemotaxis protein MotA [Pseudomonas aeruginosa 2192]
gi|310882385|gb|EFQ40979.1| chemotaxis protein MotA [Pseudomonas aeruginosa 39016]
Length = 283
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 154/282 (54%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS IIG+ + ++GGF GG +IQPFE++I+ GA LG F+ ANP
Sbjct: 1 MSKIIGIIVVFASVLGGFLLSGGKIGAIIQPFEVLIIGGAALGAFLQANPGSTFMVVLKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++F + Q Y +VL +LY ++ ++ E I+DP S IF+ P VL++
Sbjct: 61 APKMFSNR-FTQTYYLEVLGMLYEILNKSRREGMMAIEADIEDPAASPIFSKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T ++CDY+R++ GN +E+E L D E+ + + P HA++ + ++LP GIV A
Sbjct: 120 RMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHPSHAVTKVADALPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQSP-KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M L + +G + +L GT LGI+ +Y PL ++ ++ ++
Sbjct: 180 VLGIVITMALLGEGSQAEIGHHVAAALVGTFLGILAAYGFVGPLAVALEHDAKEELNMFE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K L+A +G P +A+E+GRKVL + RP+ + Q V
Sbjct: 240 AIKACLVASASGMPPSLAVEFGRKVLLPAHRPTFAELEQAVR 281
>gi|94500540|ref|ZP_01307071.1| Flagellar motor component [Oceanobacter sp. RED65]
gi|94427330|gb|EAT12309.1| Flagellar motor component [Oceanobacter sp. RED65]
Length = 283
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 90/282 (31%), Positives = 156/282 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG+ + I +I G+ G L QP+E +I+ G+G+G +++NP V KD
Sbjct: 1 MLFFIGMAVVICSVIFGYLGAHGVLLALWQPYEFIIILGSGIGAHIVSNPGGVHKDVFKM 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++ + + D L L+Y ++ +K E +++P +S IF+ P + +N+
Sbjct: 61 LPQVITGGKANKAMHMDCLSLIYDILNKSRKEGMMSIEADVENPQSSGIFSKYPAIQQNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI DY R+I GN +++E++ LMD EID ++E +P AI + +++P GIV A
Sbjct: 121 HLADFIADYFRLIAAGNMQAHELDALMDMEIDTRMHELSQPGSAIQKIADAMPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG + + +G I +L GT G++ Y P+ S+++ ++ +LY
Sbjct: 181 VLGIVITMGAIDGPMEEIGKHIAAALVGTFSGVLFGYGFFGPIASKMEHIAHEEIKLYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
K ++A +NG PQ+A+E+GRKVL +RP+ + +V
Sbjct: 241 AKATIVASVNGLPPQLAVEFGRKVLFAHDRPTFSELESKVRA 282
>gi|332527141|ref|ZP_08403218.1| chemotaxis signal transduction protein CheY [Rubrivivax
benzoatilyticus JA2]
gi|332111569|gb|EGJ11551.1| chemotaxis signal transduction protein CheY [Rubrivivax
benzoatilyticus JA2]
Length = 286
Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 104/286 (36%), Positives = 162/286 (56%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG I ++C+ G F GGN ++++ PFE+ + GA G F+ N KV+K +
Sbjct: 1 MFVIIGWVIVLVCVFGVFIVHGGNIGVILKALPFEMATIGGAAAGAFLANNQPKVLKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L + F + Y D++ LLY ++ +K E ++DP+NS +F TV
Sbjct: 61 RGLGKCFKGSKYTKARYMDLMALLYDILQKARKEGLMSIEKDVEDPHNSPLFQKYATVGN 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ ++ F+ DY+RM++ GN ++EIE+LMD EI+ +E+ AI + +LPA GIV
Sbjct: 121 DHHVSEFVTDYLRMMVSGNLNAHEIESLMDSEIETHHHEEHAAVAAIQRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y+ PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYAFAEPLAGLLEQKVDEATKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G PQVAIE+GRKVL +ERPS + V
Sbjct: 241 QCIKTTLLASMQGYAPQVAIEFGRKVLYSTERPSFSELESHVKGKK 286
>gi|260221394|emb|CBA29912.1| Chemotaxis protein motA [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 285
Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats.
Identities = 98/284 (34%), Positives = 156/284 (54%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G I I C+ G F GGN ++++ PFE++ + GA +G FV N +KVIK +
Sbjct: 1 MFVIVGWLICIACVFGVFIIHGGNISVVLKALPFELITIGGATVGAFVANNQMKVIKATI 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L F +D Y +++ LL+ L+ +K E +++P S IF P V
Sbjct: 61 KGLGSCFKGSKYTKDRYMELMALLFDLLQKARKEGLMAIEKDVEEPEQSEIFKKHPNVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN ++EIEN+MD I+ E AI + LPA GIV
Sbjct: 121 DHHVVEFVTDYLRMMVSGNLNAHEIENIMDGAIEAHHVEAHAAVAAIQRIAGGLPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y+ PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYAFAEPLAGLLEQKVEEGGKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K L+A M G P A+E+GR++L +ERP+ + V +
Sbjct: 241 QCIKTILLASMQGYNPSTAVEFGRQILFSTERPTFSELEAHVKK 284
>gi|89056675|ref|YP_512126.1| flagellar motor protein MotA [Jannaschia sp. CCS1]
gi|88866224|gb|ABD57101.1| chemotaxis protein MotA [Jannaschia sp. CCS1]
Length = 288
Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 162/289 (56%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + ++ + GG+ GG I+++ PFE +++ GA LG F+++N IK +
Sbjct: 1 MLGIVGIAVVLVMVFGGYALAGGKFGIILKALPFESMMIMGAALGAFLISNDKGSIKATI 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L+++F Y D+L LLY L+ ++ + E HI++P S IF P +L+
Sbjct: 61 SALIKVFKGPTWKDSDYRDLLCLLYELIRLQRQNA-VAVEEHIENPEGSEIFGRYPKILK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD MR + +++E ++D+ ++ ++ ++ HA+ + + LPA+GIV
Sbjct: 120 DHEAVELICDTMRSAAMNYNDPHQVEEVLDKRLEQNVHHQMHGSHAMQTVADGLPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P++LG IG +L GT LG+ L+Y P +++K+ + H+ Y
Sbjct: 180 AAVLGVIKTMASIDQPPEVLGGLIGGALVGTFLGVFLAYGFVGPFAAKMKTAIEEDHQFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+++++ LIA ++ + IE GR+ P RP + + +
Sbjct: 240 LMIREVLIANLHSHATNICIEVGRQNAPHHVRPDFNDLEEALRGLKQAA 288
>gi|70734059|ref|YP_257699.1| flagellar motor protein MotA [Pseudomonas fluorescens Pf-5]
gi|68348358|gb|AAY95964.1| motility protein, MotA family [Pseudomonas fluorescens Pf-5]
Length = 309
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 149/282 (52%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP +
Sbjct: 27 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGYMTMHVVKK 86
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F Y +VL L+Y ++ ++ E I+D S IF P VL++
Sbjct: 87 SLGMFS-SRFTHTFYLEVLGLIYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAVLKDE 145
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T F+CDY+R++ GN +E+E L D E+ + + P HA++ + + +P GIV A
Sbjct: 146 RMTAFVCDYLRIMSSGNMAPHELEGLFDMELFSLKEDLEHPSHAVNGIADGMPGFGIVAA 205
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L K +G +G +L GT GI+ +Y PL + ++ +Y
Sbjct: 206 VLGIVVTMASLGDGDQKSIGLHVGAALVGTFFGILAAYGFFGPLAHSLAHDAKEELNVYE 265
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL + RPS + Q V
Sbjct: 266 AIKASLVASASGMPPSLAVEFGRKVLYPAHRPSFAELEQAVR 307
>gi|326795805|ref|YP_004313625.1| flagellar motor stator protein MotA [Marinomonas mediterranea
MMB-1]
gi|326546569|gb|ADZ91789.1| flagellar motor stator protein MotA [Marinomonas mediterranea
MMB-1]
Length = 284
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/284 (34%), Positives = 161/284 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G+ + I+ ++ G+ A GN L QPFE++I+ GA LG F++AN L +
Sbjct: 1 MFALLGILVVIVSVVTGYLASHGNIIALWQPFEVLIICGAALGAFMIANSLTLQIRVFKM 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +IF ++ Y +L LY L + EN I+ P+ S +F P VL +
Sbjct: 61 IPQIFLGSRHKKEFYKQLLGALYSLFQKSRLEGFLAIENDIELPFESNVFQRFPDVLNDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ D R+ + S+E+E L+DEEI+ I E KP HA++ + E+LP GIV A
Sbjct: 121 HLIYFLTDNFRIYTLTGLPSHELEALIDEEIEQISEELEKPAHAVNRVAEALPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ S + +GT + +L GT LGI +Y P ++ +++ + + Y+
Sbjct: 181 VLGIVITMGSIGGSMEEIGTHVAAALVGTFLGIFFAYGFVGPASAHLEALGQHELKAYMC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
VK A+I+ ++G P VA+E GRK+LP RPS +++++ QY
Sbjct: 241 VKAAVISIVSGHPPAVAVETGRKLLPPEMRPSFLELSEDIKQYR 284
>gi|296534173|ref|ZP_06896664.1| chemotaxis protein MotA [Roseomonas cervicalis ATCC 49957]
gi|296265500|gb|EFH11634.1| chemotaxis protein MotA [Roseomonas cervicalis ATCC 49957]
Length = 289
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 95/289 (32%), Positives = 167/289 (57%), Gaps = 2/289 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M + G + ++C+ GG+ GG+ ++ PFE++I+ GA +G F+MAN + +K +
Sbjct: 1 MIVLAGFGVVLVCVFGGYLIAGGSLGPILHALPFEMLIIGGAAVGSFLMANSMAAVKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L ++ + Y D+ +LY L+ + E HI+ P S IFT P VL
Sbjct: 61 GALKKVLKGARYTRQDYLDLCAVLYRLLRVAQMKGAVGLEPHIERPNESEIFTLFPKVLA 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + ICDY+RMI + +++E++M E+ I E+L P HA+ M ++LPA+GIV
Sbjct: 121 DHHALSLICDYLRMIGMNADDPHQVEDVMLRELKKIREEELHPAHALQTMADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++ + P +LG IG +L GT LG++L+Y L PL +++++ ++ +
Sbjct: 181 AAVLGVIKTMGSIDKPPAVLGAMIGGALVGTFLGVLLAYGLVGPLATRLRAIVDEEAKYL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+V+ LIA++ G P VA+E GRK +P P+ +++ + +
Sbjct: 241 EVVRAVLIAHLQGNAPSVAVEIGRKAVPSDLMPTFQVLETAMQEQRAGA 289
>gi|294679002|ref|YP_003579617.1| chemotaxis protein MotA [Rhodobacter capsulatus SB 1003]
gi|294477822|gb|ADE87210.1| chemotaxis protein MotA [Rhodobacter capsulatus SB 1003]
Length = 289
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 83/279 (29%), Positives = 153/279 (54%), Gaps = 3/279 (1%)
Query: 11 ILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ GG+ A GG I+++ PFE++++ GA +G FV++N L IK + + ++F
Sbjct: 11 FAMVFGGYVAAGGKMGIILKALPFEMIMIGGAAVGAFVLSNDLPSIKHTVKDIGKVFKGA 70
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
Y D+L LL+ L+ ++ + E HI+ P NS+IF P +L ++E ICD
Sbjct: 71 KWKPSDYRDLLCLLFELIRLARQ-NPVAIEEHIEAPENSSIFGKYPKILHDHEAVEMICD 129
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
MR + +++E +++++++ + + HA+ + +++PA+GIV A+LG+IK M
Sbjct: 130 TMRSASMNYDDPHQVEEVLEKQLEANYHHAMHSSHAMQSIADAMPALGIVAAVLGVIKTM 189
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
++ Q P+ILG IG +L GT LG+ L+Y P ++IK+ + Y ++++ L+A
Sbjct: 190 ASIDQPPEILGKMIGGALVGTFLGVFLAYGFIGPFATRIKAVVDEDAHFYKLIREVLVAN 249
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++ + IE GR+ P RPS + + +
Sbjct: 250 LHNHATNICIEVGRQNTPHHIRPSFSELEEALKAVKSEA 288
>gi|26991583|ref|NP_747008.1| flagellar motor protein MotA [Pseudomonas putida KT2440]
gi|148549983|ref|YP_001270085.1| flagellar motor protein MotA [Pseudomonas putida F1]
gi|24986671|gb|AAN70472.1|AE016688_11 motility protein, MotA family [Pseudomonas putida KT2440]
gi|148514041|gb|ABQ80901.1| Flagellar motor component-like protein [Pseudomonas putida F1]
gi|313500884|gb|ADR62250.1| Flagellar motor protein MotA [Pseudomonas putida BIRD-1]
Length = 283
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 149/282 (52%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP +
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTMHVIKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++F Y +VL L+Y ++ ++ E I+D S IF PTVL +
Sbjct: 61 SMKMF-GSRFSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTVLADE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T F+CDY+R++ GN +E+E L D E+ + E P HA++ + + +P GIV A
Sbjct: 120 RMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L +G +G +L GT GI+ +Y PL ++ ++ LY
Sbjct: 180 VLGIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEELNLYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAVR 281
>gi|83593177|ref|YP_426929.1| motA, chemotaxis (motility protein A [Rhodospirillum rubrum ATCC
11170]
gi|83576091|gb|ABC22642.1| motA, chemotaxis (motility protein A [Rhodospirillum rubrum ATCC
11170]
Length = 285
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 95/270 (35%), Positives = 154/270 (57%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+IGG+ A GG+ +L QPFE +I+ GA LG F++ NP V+ + SL + +
Sbjct: 13 SVIGGYAAPGGHLAVLWQPFEFIIILGASLGAFLIGNPKTVLTGTLKSLGPMMKGPKHNK 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+Y ++L LLY L K E+HI+ P +S IF P +++ F+CDY+R+
Sbjct: 73 ASYLELLSLLYTLFRLAKTKGDLALESHIEKPEDSPIFQKFPAFSKDHHNVEFLCDYLRL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ +G ++E+E +++ EI+ E A+ +M + +PA+GIV A+LG+I MG+++
Sbjct: 133 LTLGTNNAHEVETIIEAEIESHHVEAHNIPSAMVNMADGMPALGIVAAVLGVIHTMGSIT 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ P++LG IG +L GT +G++LSY P I++ Q + +K ++A+M G
Sbjct: 193 EPPEVLGHLIGAALVGTFMGVLLSYGFFAPFGRAIEAVFNNQTQYLHCMKSGILAHMQGY 252
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
PQV+IE+ RK LP S RPS V V
Sbjct: 253 APQVSIEFARKTLPPSVRPSFAEVEDTVTN 282
>gi|325271246|ref|ZP_08137791.1| flagellar motor protein MotA [Pseudomonas sp. TJI-51]
gi|324103649|gb|EGC00951.1| flagellar motor protein MotA [Pseudomonas sp. TJI-51]
Length = 283
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 149/282 (52%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP +
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGYMTMHVIKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++F Y +VL L+Y ++ ++ E I+D S IF PTVL +
Sbjct: 61 SMKMF-GSRFSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTVLADE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T F+CDY+R++ GN +E+E L D E+ + E P HA++ + + +P GIV A
Sbjct: 120 RMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L +G +G +L GT GI+ +Y PL ++ ++ LY
Sbjct: 180 VLGIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEELNLYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAVR 281
>gi|259417201|ref|ZP_05741120.1| chemotaxis protein MotA [Silicibacter sp. TrichCH4B]
gi|259346107|gb|EEW57921.1| chemotaxis protein MotA [Silicibacter sp. TrichCH4B]
Length = 289
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 87/279 (31%), Positives = 152/279 (54%), Gaps = 3/279 (1%)
Query: 11 ILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ GG+ GG I+I+ PFE++++ GA +G F+++N + +K + + ++F
Sbjct: 11 FAMVFGGYLLAGGKLGIIIKSLPFEMMMIGGAAVGAFLISNDMGGVKHTLKDMGKVFKGP 70
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
D Y D+L LL+ L+ + + E E HI+DP NST+F P +L + E I D
Sbjct: 71 KWKPDDYKDLLCLLFALIRIAR-ANPVEVEQHIEDPENSTVFGKYPKILADKEAINLISD 129
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
MR + +++E ++++ I+ L+ L HA+ M + LPA+GIV A+LG+IK M
Sbjct: 130 TMRSASMNYDDPHQVEEVLEKRIEANLHHALHSSHALQTMADGLPALGIVAAVLGVIKTM 189
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
++ Q P++LG IG +L GT LG+ LSY L P ++KS + Y ++++ L+A
Sbjct: 190 ASIDQPPEVLGKMIGGALVGTFLGVFLSYGLVAPFAGKVKSVVEEDAHFYQLIREVLVAN 249
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++ + IE GR+ P RP + + + + +
Sbjct: 250 LHNHAAAICIEVGRQNTPSHIRPGFSELEEALNEVKQDA 288
>gi|170723855|ref|YP_001751543.1| flagellar motor protein MotA [Pseudomonas putida W619]
gi|169761858|gb|ACA75174.1| flagellar motor MotA protein [Pseudomonas putida W619]
Length = 283
Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 150/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP +
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFMQANPGYMTMHVIKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E+ I+D S IF P VL +
Sbjct: 61 SLKMF-GTRFTHTFYLEVLGLVYEILNKSRREGMMAIESDIEDAAASPIFAKYPAVLGDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T FICDY+R++ GN +E+E L D E+ + E P HA++ + + +P GIV A
Sbjct: 120 RMTAFICDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVNGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L + +G +G +L GT GI+ +Y PL ++ ++ LY
Sbjct: 180 VLGIVVTMASLGEGDQASIGLHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEELNLYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAVR 281
>gi|313672699|ref|YP_004050810.1| lateral flagellar motor protein mota [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939455|gb|ADR18647.1| lateral flagellar motor protein MotA [Calditerrivibrio
nitroreducens DSM 19672]
Length = 284
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 98/284 (34%), Positives = 167/284 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG + ++GG+ GGN ++LIQP E +I+AGA G ++ +P ++K
Sbjct: 1 MTAIIGYIVVFGAVLGGYLMSGGNLHMLIQPSEFIIIAGAATGALIVGSPTALLKLIAGG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ K + Y D+L LLY L +K E+ +++ S IF + P+VL+N+
Sbjct: 61 MKSFLSGKTPSKKEYEDLLMLLYELFIKARKNGLLSLESDVENAKESPIFNNYPSVLKNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +++I+ G + +E+ENLMD +I+ E+ P HAI M + LPA GIV A
Sbjct: 121 HLLHFISDNLKVILTGVMQPHELENLMDVDIETAHKEEHLPAHAIQKMADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG +S+ P++LG IG +L GT LG++L+Y + P+ S +++ + ++ +
Sbjct: 181 VMGVVITMGLISEPPEVLGHHIGAALVGTFLGVLLAYGIVGPIASALENIVIFNSFVFRV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
VK+AL+ ++N P+ AIE R+ +P S RPS E + +++
Sbjct: 241 VKEALVFFVNTPDPKAAIELARRAIPPSARPSFEELEEKLKNIK 284
>gi|170748129|ref|YP_001754389.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
gi|170654651|gb|ACB23706.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
Length = 295
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 132/288 (45%), Positives = 192/288 (66%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL I + GGF+A+GG+ ++ QPFE +IV GA +G F++ANP V+ D+G +
Sbjct: 1 MGVIIGLLIAAASVGGGFWALGGHLTVVWQPFEFIIVGGAAIGAFIVANPAGVVLDTGSA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + ++ Y ++L LL+ L ++ RNE E H++ P S IF + P +
Sbjct: 61 LRDAVFARVPRREDYLELLGLLFALTREVRSKPRNEVEGHLERPGESEIFKAYPRAARDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
LT FICDY+R+II+GNAR Y++E LM+EEI +KLK Y+A+ + LPA+GIV A
Sbjct: 121 ALTLFICDYVRLIIIGNARPYDVEALMEEEIATHRRDKLKVYNALMITADGLPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
ILGI+KAMG L QSP +LG+ IG +L GT GI +SY++ P+ ++IK+TR Q RLYII
Sbjct: 181 ILGIVKAMGALDQSPALLGSLIGSALVGTFTGIFVSYTVVAPVANKIKATRESQARLYII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
VK+ L+AYMNGA+PQ+A+EYGRK + + RP+I+ V + + +
Sbjct: 241 VKQTLLAYMNGALPQIAVEYGRKAITSANRPTIDEVEDATMTASPRGE 288
>gi|167035947|ref|YP_001671178.1| flagellar motor protein MotA [Pseudomonas putida GB-1]
gi|166862435|gb|ABZ00843.1| flagellar motor MotA protein [Pseudomonas putida GB-1]
Length = 283
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G LIQPFE++I+ GA G F+ ANP +
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTMHVIKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++F Y +VL L+Y ++ ++ E I+D S IF PTVL +
Sbjct: 61 SMKMF-GSRFSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTVLADE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T F+CDY+R++ GN +E+E L D E+ + E P HA++ + + +P GIV A
Sbjct: 120 RMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L + +G +G +L GT GI+ +Y PL ++ ++ LY
Sbjct: 180 VLGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEELNLYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAVR 281
>gi|237798268|ref|ZP_04586729.1| flagellar motor protein MotA [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331021120|gb|EGI01177.1| flagellar motor protein MotA [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 283
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 95/282 (33%), Positives = 153/282 (54%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + I I+GG+ G L QP+E++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVIASILGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IFT P VL++
Sbjct: 61 SLKMF-GSRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFTKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + E P HA++ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAVTGVADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L S +G +G +L GT GI+ +Y PL + + ++ +Y
Sbjct: 180 VLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEMNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 281
>gi|330960100|gb|EGH60360.1| flagellar motor protein MotA [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 283
Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 151/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G L QP+E++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMTMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IF P VL++
Sbjct: 61 SLKMF-GSRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + E P HA++ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L S +G +G +L GT GI+ +Y PL + + ++ +Y
Sbjct: 180 VLGIVITMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATCLAHDAKEEMNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 281
>gi|304321131|ref|YP_003854774.1| Flagellar motor protein MotA [Parvularcula bermudensis HTCC2503]
gi|303300033|gb|ADM09632.1| Flagellar motor protein MotA [Parvularcula bermudensis HTCC2503]
Length = 285
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 85/283 (30%), Positives = 166/283 (58%), Gaps = 3/283 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+GL +T++ + GG+ GG I++ P+E++++ GA +G F+ AN IK +G
Sbjct: 1 MLAIVGLVVTLVMVFGGYLFAGGKLGIILHSLPYEMMMIGGAAVGAFLAANDFTRIKHAG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L+ F + Y ++L L++ L+ + S + E HI++P S IF P + +
Sbjct: 61 GDLVAAFAGAKWKKQDYQELLCLMHELIVVFR-ESPVDVEKHIEEPGESEIFGRYPRIAK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ICD +R +++ +++E L+++++D E + HA+ + ++LPA+GIV
Sbjct: 120 DKGAVELICDTIRSMLLNFDDVHQVEELLEKQLDQKKEESMHGAHAVEQVADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ + P++LG IG +L GT LG+ LSY++ P +++K+ R ++H+ Y
Sbjct: 180 AAVLGVIKTMASIDKPPEVLGKMIGGALVGTFLGVFLSYAVVGPFAARMKAVREEEHQFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
++++ L++ ++ P + +E GR+ +P RPS + + +
Sbjct: 240 ELIREVLVSSLHKHAPNICVEVGRRHVPSVMRPSFNELEEALK 282
>gi|99082791|ref|YP_614945.1| flagellar motor protein MotA [Ruegeria sp. TM1040]
gi|99039071|gb|ABF65683.1| Chemotaxis motA protein (Motility protein A) [Ruegeria sp. TM1040]
Length = 289
Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats.
Identities = 85/279 (30%), Positives = 150/279 (53%), Gaps = 3/279 (1%)
Query: 11 ILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ GG+ GG I+++ PFE++++ GA +G F+++N + +K + + ++F
Sbjct: 11 FAMVFGGYLLAGGKLGIILKSLPFEMMMIGGAAVGAFLISNDMGGVKHTLKDMGKVFKGP 70
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
D Y D+L LL+ L+ + + E E HI+DP NS +F P +L + E I D
Sbjct: 71 KWKPDDYKDLLCLLFALIRIAR-ANPVEVEQHIEDPENSAVFGKYPKILADKEAINLISD 129
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
MR + +++E ++++ I+ L+ L HA+ M + LPA+GIV A+LG+IK M
Sbjct: 130 TMRSASMNYDDPHQVEEVLEKRIEANLHHALHSSHALQTMADGLPALGIVAAVLGVIKTM 189
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
++ Q P++LG IG +L GT LG+ LSY L P ++KS + Y ++++ L+A
Sbjct: 190 ASIDQPPEVLGKMIGGALVGTFLGVFLSYGLVAPFAGKVKSVVEEDAHFYQLIREVLVAN 249
Query: 249 MNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++ + IE GR+ P RP + + + +
Sbjct: 250 LHNHAAAICIEVGRQNTPSHIRPGFSELEEALNEVKQGA 288
>gi|197106584|ref|YP_002131961.1| chemotaxis MotA protein [Phenylobacterium zucineum HLK1]
gi|196480004|gb|ACG79532.1| chemotaxis MotA protein [Phenylobacterium zucineum HLK1]
Length = 289
Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 171/289 (59%), Gaps = 2/289 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G + GGN +++ P E++ + GAG+ F++AN L VIK +
Sbjct: 1 MFQIIGIVLLFALVFGSYIISGGNMGVILHALPHEMMAIGGAGVASFLIANSLPVIKATV 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++FG Y D+L LL++L +K E+HI++P STIFT P +++
Sbjct: 61 GNFGKVFGGPKWKAADYRDLLSLLFLLTKTMKSKGVIALESHIENPTESTIFTRFPKIMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E +P HA+ + ++LPA+GIV
Sbjct: 121 DHFAIDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEAQQPSHALQTLADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P++LG IG +L GT LG+ L+Y L P+ ++++ ++ Y
Sbjct: 181 AAVLGVIKTMGSITEPPEVLGGMIGSALVGTFLGVFLAYGLVGPMATRMREVIDEEGSFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
I++ L+A+++G Q+++E GR +P +PS + + + +
Sbjct: 241 RIIQSVLVAHLHGNAAQISVEIGRGSVPSGAQPSFIELEEALSNIPNEA 289
>gi|226944521|ref|YP_002799594.1| Fagellar motor protein [Azotobacter vinelandii DJ]
gi|226719448|gb|ACO78619.1| Fagellar motor protein [Azotobacter vinelandii DJ]
Length = 291
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 92/285 (32%), Positives = 160/285 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +GL + +L + GG+ GG+ L QP E++I+ GA LG F+ AN K+IK + +
Sbjct: 1 MLIALGLIVVMLSVFGGYALSGGSLGPLYQPLELLIIGGAALGAFIAANNGKIIKATLGA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + Y +++ LLY L+ ++ E I++P S +F P V+++
Sbjct: 61 FSRLRRTNSYDKALYLELMSLLYNLLSKARREGMLAIEKEIENPAESALFGECPKVVQDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ TF+ DY+R++I GN ++E++ LM EI+ +E P A++ + ++LPA GIV A
Sbjct: 121 MIVTFLTDYLRLMISGNMAAHELDELMVHEIEEFEHEAHLPVDALTKVSDALPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++KA+ P +G I +L GT LGI+L+Y + P S+I + ++
Sbjct: 181 VMGVVKALSMADAGPDEMGLMIAHALVGTFLGILLAYGVVAPAASRIDRQVGEAVKMLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++ L+A +NG PQ+A+E+GRK L +ERPS + + V
Sbjct: 241 MRVTLLASLNGYAPQLAVEFGRKALHSAERPSAGELEEHVRNGKG 285
>gi|66043828|ref|YP_233669.1| flagellar motor protein MotA [Pseudomonas syringae pv. syringae
B728a]
gi|63254535|gb|AAY35631.1| chemotaxis motA protein [Pseudomonas syringae pv. syringae B728a]
gi|330971542|gb|EGH71608.1| flagellar motor protein MotA [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 283
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 152/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + + +IGG+ G L QP+E++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVLASVIGGYVLSHGKVMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IF P VL++
Sbjct: 61 SLKMF-GTRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + + P HAI+ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEDLEHPSHAITGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L S +G +G +L GT GI+ +Y PL + + ++ +Y
Sbjct: 180 VLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEMNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 281
>gi|289672565|ref|ZP_06493455.1| flagellar motor protein MotA [Pseudomonas syringae pv. syringae
FF5]
gi|330939853|gb|EGH43086.1| flagellar motor protein MotA [Pseudomonas syringae pv. pisi str.
1704B]
gi|330951463|gb|EGH51723.1| flagellar motor protein MotA [Pseudomonas syringae Cit 7]
gi|330978962|gb|EGH78021.1| flagellar motor protein MotA [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 283
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 152/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + + +IGG+ G L QP+E++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVLASVIGGYVLSHGKVMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IF P VL++
Sbjct: 61 SLKMF-GSRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + + P HAI+ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEDLEHPSHAITGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L S +G +G +L GT GI+ +Y PL + + ++ +Y
Sbjct: 180 VLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEMNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 AIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 281
>gi|302189800|ref|ZP_07266473.1| flagellar motor protein MotA [Pseudomonas syringae pv. syringae
642]
gi|330873803|gb|EGH07952.1| flagellar motor protein MotA [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 283
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 152/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IF P VL++
Sbjct: 61 SLKMF-GTRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + E P HAI+ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAITGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L S +G +G +L GT GI+ +Y PL + + ++ +Y
Sbjct: 180 VLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEMNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 281
>gi|285019702|ref|YP_003377413.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
gi|283474920|emb|CBA17419.1| probable flagellar motor protein [Xanthomonas albilineans]
Length = 284
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/281 (32%), Positives = 164/281 (58%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + ++ + GG+ G L QP+E++I+ G+ LG F+++ P K++K++
Sbjct: 1 MLIIVGFIVVLVSVAGGYVLSHGKLGALWQPYELMIIGGSALGAFLVSTPGKIVKETISG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F D Y L L+Y L+ ++ E+H+++P +S IF + P VL ++
Sbjct: 61 IIGVFKGPQYKADDYRGTLTLIYELLNKARRDGFMALEDHVENPASSAIFGNYPKVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R++I N +E+E L++ E++ +E L P HA+S + + LP GIV A
Sbjct: 121 HLLDFITDCLRLMIGSNIEPHELEPLLELELEKHHHEALAPAHALSKVSDGLPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ + +G +G +L GT LGI+++Y +PL++ +++ + R+Y
Sbjct: 181 VLGIVITMGSIGGPIEEIGHHVGAALVGTFLGILMAYGFVSPLSAAMEARAEQDGRIYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
VK AL+A + G P++A+E+ RK LP + RPS +
Sbjct: 241 VKTALLACLRGYNPKIALEFARKTLPTNVRPSFADFESHLK 281
>gi|226225702|ref|YP_002759808.1| chemotaxis MotA protein [Gemmatimonas aurantiaca T-27]
gi|226088893|dbj|BAH37338.1| chemotaxis MotA protein [Gemmatimonas aurantiaca T-27]
Length = 285
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 79/282 (28%), Positives = 150/282 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL + +IGG+ G +L Q E +I+ GAGLG ++ANP V+K
Sbjct: 1 MFVIIGLVVVFGSVIGGYVMHHGQIAVLFQINEFIIIGGAGLGTLIIANPPAVLKACVAQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G Y ++L++LY + +K E HI+ P +S IF P+ N+
Sbjct: 61 TLGLLKPNPYGASAYAELLQVLYEVFQKARKDGLVGLEAHIEAPESSDIFQKYPSFTNNH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +CD +++++ G + + ++D +++ +E + HAI+ +G+++P GIV A
Sbjct: 121 HAVSLLCDTLKVLLTGTVEDHNLAEILDVDLEKHHHEGMLAPHAITTVGDAMPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I MG++ + +G + +L GT +GI+L+Y + P+ +++ +H +
Sbjct: 181 VLGVIITMGSIGGAASEIGEKVAAALVGTFVGILLAYGVFGPVAKAMENRLHAEHDYMLC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
++ AL+++ G P A+E+ R+ + ERPS + + +
Sbjct: 241 IRTALLSFARGDAPMTAVEFSRRNIEPHERPSFTELEELTRK 282
>gi|261855635|ref|YP_003262918.1| flagellar motor protein MotA [Halothiobacillus neapolitanus c2]
gi|261836104|gb|ACX95871.1| flagellar motor protein MotA [Halothiobacillus neapolitanus c2]
Length = 283
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 98/278 (35%), Positives = 153/278 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG + ++GGF GG+ +L+QP E +I+ GA L FV N K +K +
Sbjct: 1 MNVIIGWVLLFGAVLGGFALAGGHLIVLVQPVEYIIIIGAALAAFVAGNSGKTMKATMGG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ Y + L LLY + +K E I+DP NS +F P+VL ++
Sbjct: 61 FATALKGSKYKKALYMETLALLYHIFTRARKEGLMAIEEDIEDPQNSALFKEAPSVLADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI DY+R+++ ++I+NLMD +ID E P I+ + + LPA GIV A
Sbjct: 121 HALDFITDYLRLMVSSTLDVHQIDNLMDIDIDTHHQEASLPGTNIAKIADGLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M ++++ P +LG I +L GT LGI++SY L P+ + ++ + Y
Sbjct: 181 VLGVVHTMESVAEPPAVLGGLIAAALVGTFLGILVSYGLVAPVAANLEHKVNDSTKYYQS 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+K A+IA+MNG PQVA E+GRKVL S+RP + + +
Sbjct: 241 IKAAMIAFMNGYPPQVAAEFGRKVLFSSDRPGFQELEE 278
>gi|330807220|ref|YP_004351682.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375328|gb|AEA66678.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 283
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 151/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G LIQPFE++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVLKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F Y +VL L+Y ++ ++ E I+D S IF P VL++
Sbjct: 61 SLGMFS-SRFSHTFYLEVLGLIYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAVLKDA 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T FICDY+R++ GN +E+E L D E+ + + P HA++ + +++P GIV A
Sbjct: 120 RMTAFICDYLRIMSSGNMAPHELEGLFDMELYSLKEDLEHPSHAVTGIADAMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L K +G +G +L GT GI+ +Y PL + ++ +Y
Sbjct: 180 VLGIVVTMASLGDGDQKSIGLHVGAALVGTFFGILAAYGFFGPLAHSLAHDAKEELNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL + RPS + Q V
Sbjct: 240 AIKASLVASASGMPPSLAVEFGRKVLYPAHRPSFAELEQAVR 281
>gi|77456740|ref|YP_346245.1| flagellar motor protein MotA [Pseudomonas fluorescens Pf0-1]
gi|77380743|gb|ABA72256.1| chemotaxis MotA protein [Pseudomonas fluorescens Pf0-1]
Length = 283
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 152/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G LIQPFE++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVLKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F Y +VL L+Y ++ ++ E I+D S IF P VL++
Sbjct: 61 SLSMFS-SRFSHTFYLEVLGLIYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T FICDY+R++ GN +E+E L D E+ + + P HA++ + +++P GIV A
Sbjct: 120 RMTAFICDYLRIMSSGNMAPHELEGLFDMELYSLKEDLEHPSHAVNGIADAMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L + K +G +G +L GT GI+ +Y PL + ++ +Y
Sbjct: 180 VLGIVVTMASLGEGDQKSIGLHVGAALVGTFFGILAAYGFFGPLAHSLAHDAKEELNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL + RPS + Q V
Sbjct: 240 AIKASLVASASGMPPSLAVEFGRKVLYPAHRPSFAELEQAVR 281
>gi|28872067|ref|NP_794686.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213967913|ref|ZP_03396059.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|301384433|ref|ZP_07232851.1| flagellar motor protein MotA [Pseudomonas syringae pv. tomato
Max13]
gi|302062275|ref|ZP_07253816.1| flagellar motor protein MotA [Pseudomonas syringae pv. tomato K40]
gi|302132279|ref|ZP_07258269.1| flagellar motor protein MotA [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28855320|gb|AAO58381.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213927256|gb|EEB60805.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|331014599|gb|EGH94655.1| flagellar motor protein MotA [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 283
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 152/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IF P VL++
Sbjct: 61 SLKMF-GTRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + + P HAI+ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEDLEHPSHAITGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L S +G +G +L GT GI+ +Y PL + + ++ +Y
Sbjct: 180 VLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEMNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 281
>gi|71736229|ref|YP_272856.1| flagellar motor protein MotA [Pseudomonas syringae pv. phaseolicola
1448A]
gi|257482422|ref|ZP_05636463.1| flagellar motor protein MotA [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289623745|ref|ZP_06456699.1| flagellar motor protein MotA [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648638|ref|ZP_06479981.1| flagellar motor protein MotA [Pseudomonas syringae pv. aesculi str.
2250]
gi|298484925|ref|ZP_07003024.1| Flagellar motor rotation protein motA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71556782|gb|AAZ35993.1| motility protein, MotA family [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298160612|gb|EFI01634.1| Flagellar motor rotation protein motA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320321895|gb|EFW77991.1| flagellar motor protein MotA [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331000|gb|EFW86974.1| flagellar motor protein MotA [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330865883|gb|EGH00592.1| flagellar motor protein MotA [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330886587|gb|EGH20248.1| flagellar motor protein MotA [Pseudomonas syringae pv. mori str.
301020]
gi|330965970|gb|EGH66230.1| flagellar motor protein MotA [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330984571|gb|EGH82674.1| flagellar motor protein MotA [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331009753|gb|EGH89809.1| flagellar motor protein MotA [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 283
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 152/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMTMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IF P VL++
Sbjct: 61 SLKMF-GSRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + E P HAI+ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAITGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L S +G +G +L GT GI+ +Y PL + + ++ +Y
Sbjct: 180 VLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATCLAHDAKEEMNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 281
>gi|124268057|ref|YP_001022061.1| chemotaxis signal transduction protein CheY [Methylibium
petroleiphilum PM1]
gi|124260832|gb|ABM95826.1| Chemotaxis signal transduction protein CheY [Methylibium
petroleiphilum PM1]
Length = 286
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 96/286 (33%), Positives = 156/286 (54%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG + + CI G + GGN +++ P E++ + G G FV+AN K +K
Sbjct: 1 MFVIIGYVVALGCIFGAYAIHGGNMQVILHAIPTEMMAIGGGAAGAFVVANQPKTLKAVL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + + Y +++ LLY ++ +K E ++DP+NS +F TV
Sbjct: 61 KAIPTLLKGSKYTKARYMELMALLYDILQKARKEGLMAIEKDVEDPHNSPLFKKYATVGS 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + F+ DY+RM++ GN +EIE+LMD EI+ +E P AI + +LPA GIV
Sbjct: 121 DHHVVEFVTDYLRMMVSGNLNPHEIESLMDSEIETHHHEAHAPAAAIGRLAGALPAFGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG++ MG++ Q P +LG IG +L GT LGI+L+Y++ PL ++ + +
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGGMIGSALVGTFLGILLAYAVVEPLGGLLEQKNDEGSKEL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+K L+A M G P +A+E+GRK L +ERPS + V
Sbjct: 241 QCIKTTLLASMQGYAPAIAVEFGRKTLYSTERPSFSELEGHVKGKK 286
>gi|304392512|ref|ZP_07374452.1| chemotaxis protein MotA [Ahrensia sp. R2A130]
gi|303295142|gb|EFL89502.1| chemotaxis protein MotA [Ahrensia sp. R2A130]
Length = 289
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 127/277 (45%), Positives = 190/277 (68%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
C++GG+ AMGG +L QP+E VI+ GA +G F++ANP+ V+KD+G L+E K G
Sbjct: 13 CVLGGYMAMGGKLMVLAQPWEFVIIGGAAIGTFLIANPMPVVKDTGKGLVEALKAKVPGP 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
D Y +L LL+ L+ ++ +E E HID P +S IF + P VL N +LT FICDY R+
Sbjct: 73 DDYLQILGLLHALLREMRTKPSSEVEGHIDAPEDSEIFKNYPVVLGNKDLTFFICDYCRL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
I+VGNARS+E+E LM+EEI I +E+++ HA++ +G+ LPA+GIV A+LG++KAMG +
Sbjct: 133 ILVGNARSHEVEALMEEEIHTIRHERMESVHALTVIGDGLPALGIVAAVLGVVKAMGAID 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
SP+ILG IG +L GT +GI LSY++ P+ ++K+ R R+Y + K+ LIA MNGA
Sbjct: 193 SSPEILGGLIGAALVGTFVGIFLSYAVVAPIAGKLKAVREAHLRVYFVAKQTLIASMNGA 252
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+PQ+A+E+GRK + +RPSI+ + +++ A
Sbjct: 253 VPQIALEFGRKAISGHDRPSIDQMEEQLAGGPVAAAA 289
>gi|145297472|ref|YP_001140313.1| LafT [Aeromonas salmonicida subsp. salmonicida A449]
gi|142850244|gb|ABO88565.1| LafT [Aeromonas salmonicida subsp. salmonicida A449]
Length = 301
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 83/282 (29%), Positives = 152/282 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IGL + +C++GGF GG P L QP E++I+ GA +G + N +V+ +
Sbjct: 17 MQKQIGLGVIFICVLGGFMMAGGKPIALWQPAELIIIIGAAVGSMFLGNSKEVMHEMWRQ 76
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F ++ Y ++L L++ L+ + + HI++P S++F P + E+
Sbjct: 77 MKQCFKSNKDEKEIYRELLTLMHQLLEETRNKGMKALDEHIENPQQSSVFLMYPQISEDP 136
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D +R++ +G +E++ ++++EI I + LKP HA+ GE+ P GI+ A
Sbjct: 137 QLLGFIIDNLRLLGMGKITPHELDTMLEQEIMAIEEDMLKPAHALHKTGEACPGFGILAA 196
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L +G + +L GT +GI L Y L P+++ ++ ++ L +
Sbjct: 197 VMGIIITMQQLDGPLSNIGVHVAAALVGTFIGIFLCYCLLEPISNAMEEMVKRRIGLLMC 256
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K LIA + G P ++++ GRK+L +PS + + V
Sbjct: 257 IKSILIAQLRGKTPLISVDSGRKMLEPDVKPSFLELEEWVTN 298
>gi|322433006|ref|YP_004210255.1| chemotaxis protein [Acidobacterium sp. MP5ACTX9]
gi|321165233|gb|ADW70937.1| chemotaxis protein [Acidobacterium sp. MP5ACTX9]
Length = 290
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 88/290 (30%), Positives = 155/290 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IIG+ + +IGGF G +L+QP E+V + GA LG ++ANP+ ++K
Sbjct: 1 MISIIGIIVVFGAVIGGFMMEKGQLAVLVQPAELVTIGGAALGTLLVANPMHILKGIASG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ + G + Y D LK+++ L +K E ++ S IFT+ P ++++
Sbjct: 61 LMGVIGGSPFTKQRYLDTLKMMFDLFSKARKDGMVAIEADVEGADKSPIFTAYPKFMKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CD MRM I G ++++ +M+ ++D + P A++ + ++LP +GIV A
Sbjct: 121 HAVDFVCDTMRMAITGGVLPFDVDQMMELDMDTHHHSSSLPTTALNTVADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG L P+ +G + +L GT LGI+L Y + PL S + ++H Y I
Sbjct: 181 VLGIVITMGALGGPPEEIGHKVAAALVGTFLGILLCYGVLGPLASFMGKMNEEEHAYYHI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
++ ++A++ G P +A+E R+ +P RPS V + + A+
Sbjct: 241 LRVVMLAFIKGTSPILAVELARRAIPAHLRPSFSEVEKACRNKSAAPAAA 290
>gi|22758826|gb|AAN04224.1| LafT [Aeromonas salmonicida]
Length = 301
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 83/282 (29%), Positives = 152/282 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IGL + +C++GGF GG P L QP E++I+ GA +G + N +V+ +
Sbjct: 17 MQKQIGLGVIFICVLGGFMMAGGKPIALWQPAELIIIIGAAVGSMFLGNSKEVMHEMWRQ 76
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F ++ Y ++L L++ L+ + + HI++P S++F P + E+
Sbjct: 77 MKQCFKSNKDEKEIYRELLTLMHQLLEETRNKGMKALDEHIENPQQSSVFLMYPQISEDP 136
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D +R++ +G +E++ ++++EI I + LKP HA+ GE+ P GI+ A
Sbjct: 137 QLLGFIIDNLRLLGMGKITPHELDTMLEQEIMAIEEDMLKPAHALHKAGEACPGFGILAA 196
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L +G + +L GT +GI L Y L P+++ ++ ++ L +
Sbjct: 197 VMGIIITMQQLDGPLSNIGVHVAAALVGTFIGIFLCYCLLEPISNAMEEMVKRRIGLLMC 256
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K LIA + G P ++++ GRK+L +PS + + V
Sbjct: 257 IKSILIAQLRGKTPLISVDSGRKMLEPDVKPSFLELEEWVTN 298
>gi|237653885|ref|YP_002890199.1| flagellar motor protein MotA [Thauera sp. MZ1T]
gi|237625132|gb|ACR01822.1| flagellar motor protein MotA [Thauera sp. MZ1T]
Length = 284
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 103/285 (36%), Positives = 164/285 (57%), Gaps = 1/285 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I + +G + A+ G+ L P E + + G +GGFV N K IK + S
Sbjct: 1 MFLIIGYVIILAASLGTY-AVHGSLAALWVPMEYLAIIGLMIGGFVAGNGPKAIKGTLGS 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + Y D+L LL+ ++ ++K EN I++P +S IF+ P+V ++
Sbjct: 60 LSLAVKGSKYNKALYVDLLALLFEILAKVRKEGLMSIENDIENPDSSPIFSKYPSVAADH 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ DY+RM++ GN ++EIENLMD EI+ E + H +S + +++PA GIV A
Sbjct: 120 HAVEFMTDYLRMMVGGNLNAFEIENLMDMEIETHHQEAHQAPHVVSKVADAVPAFGIVVA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ Q P +LG IG +L GT LGI++SY P+ SQ++ + ++Y +
Sbjct: 180 VMGVVNVMGSVGQPPAVLGKMIGGALVGTFLGILVSYGFVAPIASQLEQKVEESGKIYQV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A MNG PQVA+E+GRKVL ++RP + QE+
Sbjct: 240 IKVVLLASMNGYAPQVAVEFGRKVLYSTDRPGFAELEQEIKNRKG 284
>gi|190572620|ref|YP_001970465.1| flagellar motor protein MotA [Stenotrophomonas maltophilia K279a]
gi|190010542|emb|CAQ44151.1| putative chemotaxis protein MotA [Stenotrophomonas maltophilia
K279a]
Length = 284
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 91/284 (32%), Positives = 155/284 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I+ +IGG+ G L QP+E+VI+ GA LG F++ P K +K + +
Sbjct: 1 MLIIVGFLVVIISVIGGYLGAHGRLGALWQPYELVIIGGAALGAFLVGTPAKTVKQTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F Q Y DVL LLY L+ ++ E+H++ P S +F + P V ++
Sbjct: 61 MVGVFKGPRYKQQDYIDVLSLLYELLNKARREGFMALEDHVERPAESALFGNYPKVQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R++I N +E+E L++ E++ E + P ++ + + LP GIV A
Sbjct: 121 HLIDFITDCLRLMIGSNIEPHELEPLLELELEKHHAEAMAPSQVLTKVADGLPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ +G + +L GT LGI+L Y P+ + +++ + R+Y
Sbjct: 181 VLGIVITMGSIGGDIVEVGGHVAGALVGTFLGILLGYGFVGPMAAAMEARAEQDSRIYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
VK AL+A + G P++A+E+ RK LP + RP+ Q +
Sbjct: 241 VKTALLACLRGYNPKIALEFARKTLPSNVRPAFSDFEQHLKTVK 284
>gi|254521006|ref|ZP_05133061.1| chemotaxis protein [Stenotrophomonas sp. SKA14]
gi|219718597|gb|EED37122.1| chemotaxis protein [Stenotrophomonas sp. SKA14]
Length = 284
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 90/284 (31%), Positives = 155/284 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I+ ++GG+ G L QP+E+VI+ GA LG F++ P K +K + +
Sbjct: 1 MLIIVGFLVVIISVLGGYLGAHGRLGALWQPYELVIIGGAALGAFLVGTPAKTVKQTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F Q Y DVL LLY L+ ++ E+H++ P S +F + P V ++
Sbjct: 61 MVGVFKGPRYKQQDYIDVLSLLYELLNKARREGFMALEDHVERPAESALFGNYPKVQADH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R++I N +E+E L++ E++ E + P ++ + + LP GIV A
Sbjct: 121 HLIDFITDCLRLMIGSNIEPHELEPLLELELEKHHAEAMAPSQVLTKVADGLPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG++ +G + +L GT LGI+L Y P+ + +++ + R+Y
Sbjct: 181 VLGIVITMGSIGGDIVEVGGHVAGALVGTFLGILLGYGFVGPMAAAMEARAEQDSRIYES 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
VK AL+A + G P++A+E+ RK LP + RP+ Q +
Sbjct: 241 VKTALLACLRGYNPKIALEFARKTLPSNVRPAFSDFEQHLKTVK 284
>gi|158422268|ref|YP_001523560.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
gi|158329157|dbj|BAF86642.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
Length = 296
Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 134/286 (46%), Positives = 192/286 (67%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G+ + + GGF AMGG+ ++ QPFE VI+ G F++ANP+ VIKD+G
Sbjct: 1 MMVLLGIVLGLGATFGGFMAMGGHLDVVWQPFEYVIIGGIAFSTFLIANPMSVIKDTGSG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ A + + +L LLY LM ++ RNE E HIDDP NS +F PT+L++
Sbjct: 61 IMHAMSGVAPKRKDFLALLGLLYALMREVRAKPRNEVEAHIDDPANSGLFAHFPTILKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT +ICDY R+II+GNA+S+EIE LM++EI I K KP A+ + E+LPA+GI A
Sbjct: 121 ELTQYICDYARLIIIGNAKSHEIEGLMEQEISTIKKHKTKPAAALGTVAEALPALGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+KAMG + QSP+ILG IG +L GT +GI SY++ +PL +IK TR KQ + +II
Sbjct: 181 VLGIVKAMGAIDQSPEILGHYIGSALIGTFVGIYSSYAIISPLAHKIKVTREKQCQPFII 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
VK+ LIA+MNGA+PQ+A+E+GRK + ERP+I+ V E + +
Sbjct: 241 VKQTLIAFMNGALPQIALEHGRKTIAEGERPTIDEVESEAISNVPS 286
>gi|239905382|ref|YP_002952121.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239795246|dbj|BAH74235.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 284
Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 86/284 (30%), Positives = 156/284 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + I C+ GGF GG+ +L QP E++I+ GA LG F +A+P + +
Sbjct: 1 MFAIIGIVVVIACVFGGFMLEGGHMGVLWQPIELLIIGGAALGSFFIASPKSIAIGTFKH 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +F K Y D+L LL+ L+ ++ E H+ P S P + +N
Sbjct: 61 VMHVFTGKEPSAGDYQDLLTLLFELINIARRDGIVALEPHVSKPEQSATLNKYPAIAKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICD ++ ++ ++ ++LM +I + + + A++ + +SLP +GIV A
Sbjct: 121 QLAHFICDNIKCLLSEGIDAHRYDDLMRTDIATMHHHAMIAPGAVTKVADSLPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG +++ P++LG +IG +L GT LGI++SY P+ + ++ Q + +
Sbjct: 181 VLGIVLTMGKINEPPEVLGHSIGAALVGTFLGILMSYGFVGPMANNLEYQAKAQQHMLHV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
VK+ L A+ +G P +++E GR+ +P RPS++ + +
Sbjct: 241 VKEVLAAFNSGFSPLLSVEMGRRAIPEDVRPSMDDMEGALRGKK 284
>gi|146284109|ref|YP_001174262.1| flagellar motor protein MotA [Pseudomonas stutzeri A1501]
gi|145572314|gb|ABP81420.1| chemotaxis protein MotA [Pseudomonas stutzeri A1501]
gi|327482426|gb|AEA85736.1| flagellar motor protein MotA [Pseudomonas stutzeri DSM 4166]
Length = 283
Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats.
Identities = 98/282 (34%), Positives = 155/282 (54%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + ++GGF GG LI PFE++I+ GA LGGF+ ANP
Sbjct: 1 MVKIIGIIVVFASVLGGFVLSGGKIGALIHPFEVMIIGGAALGGFLQANPGSTTMIVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL LLY ++ ++ E ++DP S +F+ P L++
Sbjct: 61 SLKMFS-TRFTHAYYLEVLSLLYAILNKSRREGMMAIEADLEDPAASPLFSKYPGFLQDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T F CDY+R++ GN +E+E L D E+ + E P HA+S + + LPA+GIV A
Sbjct: 120 RMTAFTCDYLRIMSSGNMAPHELEGLFDMELTSLKEELDHPAHAVSKVADGLPAMGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M L++ ++G +G +L GT LGI+ SY PL + ++ ++ +Y
Sbjct: 180 VLGIVITMSILAEADNAMIGYKVGSALVGTFLGILASYGFFGPLAAALEHDAKEELNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K L+A +G P +A+E+GRKVL + RPS + Q +
Sbjct: 240 SIKATLVASASGMPPSLAVEFGRKVLYPAHRPSFSELEQAMR 281
>gi|225874274|ref|YP_002755733.1| putative chemotaxis MotA protein [Acidobacterium capsulatum ATCC
51196]
gi|225793247|gb|ACO33337.1| putative chemotaxis MotA protein [Acidobacterium capsulatum ATCC
51196]
Length = 299
Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 159/277 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ I I ++GGF G +L+QP E++I+ GA +G ++ANPL+++K
Sbjct: 1 MLAIVGILIVIGAVLGGFLMEKGPLLVLMQPAELLIIGGAAVGTMLIANPLRILKAIAGG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G + G+D Y LK+LY L+ ++ E I++P S +F + P L+++
Sbjct: 61 LKGVLGKSSFGKDNYLTTLKMLYELLNKARRLGMLGIEADIENPAESQLFQNYPNFLKHH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CD +RM I GN +++++ +M+ +I++ + ++P A++ M +SLP +GIV A
Sbjct: 121 HHRDFVCDTLRMAISGNVDAFDMDQMMERDIEVHHHGAMQPITALTTMADSLPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG L P +G + +L GT LGI++ Y PL+S + T ++ +
Sbjct: 181 VLGVVITMGALDGPPGEIGHKVAAALVGTFLGILMCYGFVGPLSSSMSKTVDDENAYLYV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
++ LI+++ G P +AIE GR+ +P RP V
Sbjct: 241 LRIVLISFIKGQPPVLAIEAGRRAIPSHVRPGFAEVE 277
>gi|283133064|dbj|BAI63830.1| flagellar motor protein MotA [Pseudomonas syringae pv. tabaci]
Length = 283
Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 151/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG + ANP +
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGALLQANPGYMTMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IF P VL++
Sbjct: 61 SLKMF-GSRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + E P HAI+ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPSHAITGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L S +G +G +L GT GI+ +Y PL + + ++ +Y
Sbjct: 180 VLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATCLAHDAKEEMNVYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 281
>gi|312958641|ref|ZP_07773161.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
gi|311287184|gb|EFQ65745.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
Length = 283
Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 150/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + ++GG+ G LIQPFE++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVIKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F Y +VL L+Y ++ ++ E I+D S IF P VL++
Sbjct: 61 SLSMF-GSRFTHTFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPAVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + E P HA++ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELFSLKEELEHPSHAVTGVADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L + +G +G +L GT GI+ +Y PL + + ++ LY
Sbjct: 180 VLGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEINLYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAVR 281
>gi|295690962|ref|YP_003594655.1| MotA/TolQ/Exbb proton channel [Caulobacter segnis ATCC 21756]
gi|295432865|gb|ADG12037.1| MotA/TolQ/ExbB proton channel [Caulobacter segnis ATCC 21756]
Length = 288
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 87/284 (30%), Positives = 164/284 (57%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G + GG +++ P E++ + GAG+ F+++N + VIK +
Sbjct: 1 MFQIIGIVLLFALVFGSYLMGGGKMDVILHAAPHELMAILGAGIAAFLISNSMTVIKATA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+IF Y D+L LL++L +K E+HI+ P+ S IF P +
Sbjct: 61 GGFGKIFAGPKWKASDYRDLLSLLFLLTKTMKSKGVIALESHIEKPHESKIFERYPKITH 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E L+P HA+ M ++LPA+GIV
Sbjct: 121 DHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEALEPAHALQSMADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P +LG IG +L GT LG+ ++Y L P+ +++++ + Y
Sbjct: 181 AAVLGVIKTMGSITEPPAVLGGMIGGALVGTFLGVFMAYGLVGPMAARLQAVVNEDAAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
I++ L+A+++G Q+++E GR +P +PS + + + Q
Sbjct: 241 KIIQAVLVAHLHGNAAQISVEIGRGNVPSPAQPSFAELEEALSQ 284
>gi|119897739|ref|YP_932952.1| flagellar motor protein MotA [Azoarcus sp. BH72]
gi|119670152|emb|CAL94065.1| flagellar motor protein MotA [Azoarcus sp. BH72]
Length = 284
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 106/285 (37%), Positives = 164/285 (57%), Gaps = 1/285 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I + +G + A+ G+ L P E + + G +GGFV N K +K + S
Sbjct: 1 MFLIIGYVIILAASVGTY-AVHGSLAALWVPMEYLAIIGLMVGGFVAGNGPKAMKATLGS 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + Y D+L LLY ++ ++K EN +++P +S IF P+V ++
Sbjct: 60 LSLAVKGSPYNKALYMDLLSLLYEILAKVRKEGLMSIENDVENPDSSPIFGKYPSVTSDH 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+RM++ GN ++EIENLMD EI+ E H +S + + LPA GIV A
Sbjct: 120 HVVEFLTDYLRMMVGGNLNAFEIENLMDMEIETHHQEAHVAPHIVSKVADGLPAFGIVVA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ Q P +LG IG +L GT LGI+LSY + P+ SQI+ + ++Y +
Sbjct: 180 VMGVVNVMGSVGQPPAVLGKMIGGALVGTFLGILLSYGIVAPIASQIEQKVEESGKIYQV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A MNG PQVAIE+GRKVL ++RP+ + QE+
Sbjct: 240 MKVVLLASMNGYAPQVAIEFGRKVLYANDRPTFSELEQEIKNRKG 284
>gi|229588063|ref|YP_002870182.1| flagellar motor protein MotA [Pseudomonas fluorescens SBW25]
gi|229359929|emb|CAY46783.1| chemotaxis MotA protein [Pseudomonas fluorescens SBW25]
Length = 283
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 150/282 (53%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + I ++GG+ G LIQPFE++I+ GA G F+ ANP +
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGYMTMHVVKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F Y +VL L+Y ++ ++ E I+D S IF P VL++
Sbjct: 61 SLGMF-GSRFTHTFYLEVLGLVYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + E P HA++ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELFSLKEELEHPSHAVTGIADGMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LGI+ M +L + +G +G +L GT GI+ +Y PL + + ++ LY
Sbjct: 180 VLGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEINLYE 239
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 240 SIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAVR 281
>gi|330861236|emb|CBX71487.1| chemotaxis protein motA [Yersinia enterocolitica W22703]
Length = 259
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 84/254 (33%), Positives = 144/254 (56%)
Query: 37 VAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE 96
+ GAG+G F++ N K IK + +L ++ + Y D++ LLY L+ ++
Sbjct: 1 IGGAGIGAFIVGNNGKAIKATMKALPKLMRRSKYNKVLYMDLMALLYRLLAKSRQQGMLS 60
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
E I+ P S IF++ P +L + L FI DY+R+I+ GN ++EIE LMDEEI+
Sbjct: 61 LERDIESPLESEIFSNYPRILADKVLVEFITDYLRLIVSGNMNAFEIEALMDEEIETHEQ 120
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILS 216
E P +++ +G+SLPA GIV A++G++ A+ + + LG I ++ GT LGI+L+
Sbjct: 121 ECEVPAGSLAMVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLA 180
Query: 217 YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
Y +PL + ++ + ++ +K L++ +NG PQ+A+E+GRK L +ERPS +
Sbjct: 181 YGFISPLATLLRQQSAETTKMMQCIKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFIEL 240
Query: 277 AQEVLQYNHNKKAS 290
+ V + +
Sbjct: 241 EEHVRRVKAPAPQA 254
>gi|303249272|ref|ZP_07335505.1| chemotaxis protein MotA [Desulfovibrio fructosovorans JJ]
gi|302489311|gb|EFL49267.1| chemotaxis protein MotA [Desulfovibrio fructosovorans JJ]
Length = 284
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 87/284 (30%), Positives = 160/284 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + + C+IGGF GG+ +L+QP E++I+ GA LG F+++ P V+ +
Sbjct: 1 MFVIIGIVVVLGCVIGGFLLEGGHLGVLMQPIELLIIGGAALGSFLISAPKSVVIGTFKH 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L +F K Y D+L LL+ LM ++ E H+ P S+ P + +N
Sbjct: 61 ILHVFSGKEASSSDYQDLLTLLFELMNIARRDGIVALEPHVSQPEQSSTINRYPNIAKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICD ++ ++ ++ ++LM +I + + + A++ + +SLP +GIV A
Sbjct: 121 QLAYFICDNIKALLSEGIDAHRYDDLMRTDIATLHHHAMIAPSAVTRVADSLPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG +++ P++LG +IG +L GT LGI++ Y P+ S ++ Q ++ ++
Sbjct: 181 VLGIVLTMGKINEPPEVLGHSIGAALVGTFLGILMCYGFVGPMASNLEYQAKAQQQMLLV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
K+ L A+ +G P +++E GR+ +P RP++E + +
Sbjct: 241 AKEVLAAFNSGFSPMLSVEMGRRAIPDDVRPTMEDMEGALRGKK 284
>gi|89902462|ref|YP_524933.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89347199|gb|ABD71402.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 270
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 90/269 (33%), Positives = 147/269 (54%), Gaps = 2/269 (0%)
Query: 18 FYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
+ GGN ++++ PFE+V + G LG F + N KV++ + + + + Y
Sbjct: 2 YILHGGNIGVILKALPFELVTIFGGALGAFAVNNQPKVLRATLKLIPQAVKGSKYTKARY 61
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
+++ LLY ++ +K E +++P+ S IF TV ++ + F+ DY+RM++
Sbjct: 62 LELMALLYDILQKARKEGLMAIEKDVEEPHGSAIFKKYATVGSDHHVVEFMTDYLRMMVS 121
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
GN ++EIE+LMD EID E P AI+ + +LPA GIV A+LG++ MG++ Q P
Sbjct: 122 GNLNAHEIESLMDSEIDTHHAEAHAPVAAIARLAGALPAFGIVAAVLGVVNTMGSVGQPP 181
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+LG I +L GT LGI+L+Y++ PL ++ + +K L+A M G P
Sbjct: 182 AVLGGMIASALVGTFLGILLAYAVVEPLGGVLEQKIEDSAKELQCIKTTLLASMQGYNPA 241
Query: 256 VAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
AIE+GRKVL +ERP+ + V
Sbjct: 242 TAIEFGRKVLFSTERPTFLELESYVRGKK 270
>gi|152996654|ref|YP_001341489.1| flagellar motor component [Marinomonas sp. MWYL1]
gi|150837578|gb|ABR71554.1| flagellar motor component [Marinomonas sp. MWYL1]
Length = 284
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 93/267 (34%), Positives = 143/267 (53%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
+ A GN L QPFEIVI+ GA LG F++ANP V K L ++ + Y
Sbjct: 18 YLASHGNLLALWQPFEIVIICGAALGAFMVANPFIVQKKVLTMLPQVISGSRHNKKFYLQ 77
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+L L+Y L ++ E+ I+ P+ S +F P V+ ++E+ F+ D R+ +
Sbjct: 78 LLGLMYCLFQKSRQEGFLSIEDDIESPFTSELFNRFPDVVRDHEVVNFLTDNYRIFTLTG 137
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+YEIE +MD EI+ I E + P HA+S + E LP GIV A+LGI+ MG++ +
Sbjct: 138 LPAYEIEAIMDNEIEQIQEELVAPSHALSRVAEGLPGFGIVAAVLGIVITMGSIGGPLEE 197
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+G + +L GT LGI Y P S ++S + + Y+ +K L + ++G P VA
Sbjct: 198 IGAHVAAALVGTFLGIFFGYGFVGPAASHLESLGAHELKAYLCIKACLNSIVSGYAPPVA 257
Query: 258 IEYGRKVLPLSERPSIEIVAQEVLQYN 284
+E GRK+LP RPS ++ + QY
Sbjct: 258 VETGRKLLPPEMRPSFIELSDGLKQYR 284
>gi|325923664|ref|ZP_08185289.1| flagellar motor component [Xanthomonas gardneri ATCC 19865]
gi|325545863|gb|EGD17092.1| flagellar motor component [Xanthomonas gardneri ATCC 19865]
Length = 284
Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats.
Identities = 91/267 (34%), Positives = 158/267 (59%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ S+L +F +
Sbjct: 15 LGGYVLSHGKLGALWQPYELLIIGGAALGAFLVSTPGKIVKETFSSVLGVFKGPQYKSED 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLVYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E + P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEAMAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVAPLSAAMEARADQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS +
Sbjct: 255 KIALEFARKTLPSNVRPSFADFETHLK 281
>gi|167644833|ref|YP_001682496.1| flagellar motor protein MotA [Caulobacter sp. K31]
gi|167347263|gb|ABZ69998.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
Length = 289
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 91/288 (31%), Positives = 167/288 (57%), Gaps = 2/288 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G F GG ++I+ P E++ + GAG+ F+++N + VIK +G
Sbjct: 1 MFQIIGIVLLFGLVFGSFIMSGGKMDVIIEAAPHELMCILGAGIASFLISNSMTVIKATG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+IF Y D+L LL++L +K E+HI+ P +STIF P + +
Sbjct: 61 GGFGKIFKGPKWKTSDYRDLLSLLFLLTKTMKSKGVIALESHIEKPNDSTIFQRYPKITK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E L P HA+ + ++LPA+GIV
Sbjct: 121 DHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEGLAPAHALQSLADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P +LG IG +L GT LG+ L+Y L P ++++ + ++ Y
Sbjct: 181 AAVLGVIKTMGSITEPPAVLGAMIGGALVGTFLGVFLAYGLVGPFSTRLTAVVDEEGAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
I++ L+A+++G Q+++E GR +P +PS + + + Q
Sbjct: 241 RIIQAVLVAHLHGNAAQISVEIGRGNVPTPSQPSFLELEEALQQIPAE 288
>gi|90577361|ref|ZP_01233172.1| flagellar motor protein [Vibrio angustum S14]
gi|90440447|gb|EAS65627.1| flagellar motor protein [Vibrio angustum S14]
Length = 285
Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 80/285 (28%), Positives = 147/285 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I+C+ GG+ GGN + QP E +I+AGA LG ++ NP V+K+
Sbjct: 1 MQKFIGAIIIIICVFGGYVWAGGNLRAIWQPAEFLIIAGATLGSLIIGNPPHVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ + Y +++ LL L+ ++ + HI+ P +STIF P + ++
Sbjct: 61 FRQVLSPRNNEAQYYMELMALLQTLLDTVRNKGFKALDEHIESPQSSTIFNRYPLIKHDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +FI D +R++ +G YE+E L+++EI I + L P ++ E+LP GI+ A
Sbjct: 121 HVISFITDNLRLMAMGQMSPYELEGLLEQEISAIEEDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M + S ++G + +L GT LGI Y + +P ++ + + +
Sbjct: 181 VMGIIITMQAIDGSIAMIGYHVAAALVGTFLGIFGCYCILDPASNAMAQRVKRNMSAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 IRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNEMERWLTEQEG 285
>gi|91794979|ref|YP_564630.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91716981|gb|ABE56907.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 285
Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats.
Identities = 86/285 (30%), Positives = 154/285 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS +IGL I + + GG+ GG L QP EI+I+ GAGLG ++ANP V+++ V
Sbjct: 1 MSKLIGLIIILASVFGGYIWAGGTLMSLWQPAEILIIFGAGLGALIIANPRSVLEEMLVQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
E+ + + Y + L+ +LM ++ + HI++P S++F P+VLE+
Sbjct: 61 TKELIVKEKEDPELYPQLFALMSLLMSQIQSQGLKVLDEHIENPRESSLFLMYPSVLEHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ F+ D +R+ +G +++E+L +EEI I ++L+P A++ +GE++P GI+ A
Sbjct: 121 DVLQFLIDNLRIQSIGKMSPHDLEHLFEEEIHRIEEDRLRPSEALNKVGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M N+ ++G + +L GT +GI Y +PL+ ++ ++
Sbjct: 181 VMGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPLSKALEHLVDRKSAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V L A+ G P +AI+ GRK + RPS + + + +
Sbjct: 241 VAAVLAAFAKGKPPTMAIDAGRKQIQSENRPSFVELERWMEEQKS 285
>gi|257094101|ref|YP_003167742.1| chemotaxis MotA protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257046625|gb|ACV35813.1| chemotaxis MotA protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 285
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 97/285 (34%), Positives = 167/285 (58%), Gaps = 1/285 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + +G + ++ G+ L P E V + G +GGFV +N LK+IK + +
Sbjct: 1 MFLIVGYVIILAAALGTY-SVHGSLAALWVPLEYVAIVGLTIGGFVASNDLKIIKTTVGA 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L IF + Y D+L +L+ ++ ++K EN +++P +S IF+ P++ ++
Sbjct: 60 LPGIFKGSKFTKVLYVDLLAMLFEVLAKVRKEGLMSIENDVENPQDSPIFSKYPSLAGDH 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+RM++ GN + EIENLMD EI+ +E P H +S + +++PA GIV A
Sbjct: 120 HVMEFITDYLRMMVGGNLNAIEIENLMDIEIETHHHEVETPGHVVSKVADAVPAFGIVVA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ + P +LG IG +L GT LGI+++Y +P+ S ++ ++Y +
Sbjct: 180 VMGVVNVMGSVGEPPAVLGKMIGGALVGTFLGILIAYGFVSPVASLLEQKAQDGTKIYQV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A M+G PQVA+E+GRK L RP+ + +E+
Sbjct: 240 IKVVLLASMSGYAPQVAVEFGRKTLVSGLRPTFRELEEELKARKG 284
>gi|325915928|ref|ZP_08178224.1| flagellar motor component [Xanthomonas vesicatoria ATCC 35937]
gi|325537895|gb|EGD09595.1| flagellar motor component [Xanthomonas vesicatoria ATCC 35937]
Length = 284
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/267 (34%), Positives = 158/267 (59%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLTGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPAHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS +
Sbjct: 255 KIALEFARKTLPSNVRPSFGDFETHLK 281
>gi|21233082|ref|NP_638999.1| flagellar motor protein MotA [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|188993234|ref|YP_001905244.1| flagellar motor protein MotA [Xanthomonas campestris pv. campestris
str. B100]
gi|21114935|gb|AAM42923.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|167734994|emb|CAP53206.1| Flagellar motor component MotA [Xanthomonas campestris pv.
campestris]
Length = 284
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 92/267 (34%), Positives = 158/267 (59%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLTGVMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P VL ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGTYPKVLADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPAHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS +
Sbjct: 255 KIALEFARKTLPSNVRPSFGDFETHLK 281
>gi|323492325|ref|ZP_08097478.1| flagellar motor protein MotA [Vibrio brasiliensis LMG 20546]
gi|323313372|gb|EGA66483.1| flagellar motor protein MotA [Vibrio brasiliensis LMG 20546]
Length = 285
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 145/285 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G +LC+ GG+ GGN + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLLCVFGGYVWAGGNLGAIWQPAEYMIIIGAAAGSLIIGNPPQVLKEMRRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ +++ L+ +L+ ++ G + HI++P S IF+ P V ++
Sbjct: 61 IGLTISGPKEEREYCMELMALMQVLLETVRSGGFKSLDKHIENPEQSPIFSRYPLVAKDY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EID I + L P ++ E+LP GI+ A
Sbjct: 121 RLVSFITDNLRLMAMGQMSPHELEGLLEQEIDAIQTDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFVGIFGCYCCLDPLSNAMAQRVKRDMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG 285
>gi|21244418|ref|NP_644000.1| flagellar motor protein MotA [Xanthomonas axonopodis pv. citri str.
306]
gi|294667302|ref|ZP_06732522.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|21110080|gb|AAM38536.1| chemotaxis protein [Xanthomonas axonopodis pv. citri str. 306]
gi|292602974|gb|EFF46405.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 284
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/267 (34%), Positives = 158/267 (59%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLSGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS +
Sbjct: 255 KIALEFARKTLPSNVRPSFGDFETHLK 281
>gi|89072297|ref|ZP_01158876.1| flagellar motor protein [Photobacterium sp. SKA34]
gi|89051829|gb|EAR57281.1| flagellar motor protein [Photobacterium sp. SKA34]
Length = 285
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 81/284 (28%), Positives = 148/284 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I+C+ GG+ GGN + QP E++I+AGA LG ++ NP V+K+
Sbjct: 1 MQKFIGAIIIIICVFGGYVWAGGNLRAIWQPAELLIIAGATLGSLIIGNPPHVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+I + Y +++ LL L+ ++ + HI+ P +STIF P + ++
Sbjct: 61 FRQILSPRNNEAQYYMELMALLQTLLDTVRNKGFKALDEHIESPQSSTIFNRYPLIKNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +FI D +R++ +G YE+E L+++EI I + L P ++ E+LP GI+ A
Sbjct: 121 HVISFITDNLRLMAMGQMSPYELEGLLEQEISAIEEDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M + S ++G + +L GT LGI Y + +P ++ + + +
Sbjct: 181 VMGIIITMQAIDGSIAMIGYHVAAALVGTFLGIFGCYCILDPASNAMAQRVKRNMSAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
++ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 IRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNEMEKWLTEQE 284
>gi|114797426|ref|YP_758984.1| flagellar motor protein MotA [Hyphomonas neptunium ATCC 15444]
gi|114737600|gb|ABI75725.1| putative chemotaxis MotA protein [Hyphomonas neptunium ATCC 15444]
Length = 288
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 91/289 (31%), Positives = 169/289 (58%), Gaps = 3/289 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ I+GL +T++ + GG+ GG I++ PFE++++ GA G F+ +N +K +G
Sbjct: 1 MNAILGLVVTMVMVFGGYMLAGGKLGIILHSLPFEMMMIGGAATGAFLASNDFGTVKHTG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F ++ Y D+L L++ L++ LK+ + + E HI+ P S++F P +L+
Sbjct: 61 GDVAAAFTGPKWKKNDYQDLLLLMHELLHILKQ-NPVDIEPHIEAPNESSVFMKYPRILK 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++E ICD +R +I+ +++E L+D+ ++ +L EKL HA+ M ++LPA+GIV
Sbjct: 120 DHEAIEMICDTIRSMIMNFDNVHQVEELLDKHLESLLEEKLHGSHALQQMADALPALGIV 179
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ + P++LG IG +L GT LG+ L+Y + P +++K+ R ++H Y
Sbjct: 180 AAVLGVIKTMASIDKPPEVLGGMIGGALVGTFLGVFLAYGVVGPFAARVKTIRSEEHLFY 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
++ + L++ ++ + +E R+ P RPS + V Q V
Sbjct: 240 SMIGQVLVSNLHKNPVNICVEVARRQAPARVRPSFDEVEQAVRGLKQAA 288
>gi|86356305|ref|YP_468197.1| flagellar motor protein MotA [Rhizobium etli CFN 42]
gi|86280407|gb|ABC89470.1| chemotaxis motility protein [Rhizobium etli CFN 42]
Length = 244
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 144/244 (59%), Positives = 187/244 (76%)
Query: 47 MANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
MANP+KV+KDSG +L E F + + Y D L +LY LM +L+ SRNE E HID+P
Sbjct: 1 MANPMKVVKDSGKALAEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAE 60
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
STIF PTVL+N ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI
Sbjct: 61 STIFQQAPTVLKNKELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQ 120
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ 226
MG+S PAIGIV A+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQ
Sbjct: 121 IMGDSFPAIGIVAAVLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQ 180
Query: 227 IKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
IK R KQHRLY+IVK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++
Sbjct: 181 IKVVRNKQHRLYVIVKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGE 240
Query: 287 KKAS 290
KA+
Sbjct: 241 NKAA 244
>gi|83944200|ref|ZP_00956656.1| Flagellar motor protein MotA [Sulfitobacter sp. EE-36]
gi|83955099|ref|ZP_00963755.1| Flagellar motor protein MotA [Sulfitobacter sp. NAS-14.1]
gi|83840428|gb|EAP79601.1| Flagellar motor protein MotA [Sulfitobacter sp. NAS-14.1]
gi|83845067|gb|EAP82948.1| Flagellar motor protein MotA [Sulfitobacter sp. EE-36]
Length = 289
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 83/284 (29%), Positives = 154/284 (54%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ I+G + + + GG+ GG+ I+ PFE +++ GA LG F+ AN I +G
Sbjct: 1 MTIILGFVVVMGMVFGGYMLSGGDMGIITHALPFEGMMIGGAALGSFIAANSFANIAGAG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+L++ F Y D+L L+Y L ++ + HI++P S+IF+ P + +
Sbjct: 61 RALVKAFKGPKWNSGDYVDLLNLMYTLARKYQQNGMLALDEHIENPQESSIFSQYPKLQK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ I D RM+ + Y+ E++++ ++ +E L H ++ + ++LPAIGIV
Sbjct: 121 DHFAIDLITDSFRMLAMQFDDPYQAEDVINRKLKKHHHEALVAPHGLTTVSDALPAIGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ + P +LG IG +L GT LG+ L+Y +P+ +++++ + Y
Sbjct: 181 AAVLGVIKTMSSIDKPPAVLGAMIGGALVGTFLGVFLAYLFVSPVANRLQAIEEQDGIYY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+++ IA ++G P + E GR +P S +PS + + Q
Sbjct: 241 AVIRDIFIAILHGHSPAICTEIGRGNIPTSLQPSFYEMEEARKQ 284
>gi|89069808|ref|ZP_01157143.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
gi|89044609|gb|EAR50725.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
Length = 289
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 86/275 (31%), Positives = 149/275 (54%), Gaps = 3/275 (1%)
Query: 15 IGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG+ GG I+++ PFE++++ GA +G FV++N + IK + + ++F
Sbjct: 15 FGGYLLAGGKMGIILKSLPFEMIMIGGAAIGAFVISNDVPAIKHTLKDVGKVFKGPKWKA 74
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ Y D+L LL+ L+ + + E E HI+ P +S IF P + + E ICD +R
Sbjct: 75 EDYRDLLCLLFELIRVARN-NPVEIEEHIETPESSAIFGRYPKISADGEALALICDTLRS 133
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ +++E ++++ ID L+ KL HA+ + + LPA+GIV A+LG+IK M ++
Sbjct: 134 ASMNYDDPHQVEEVLEKRIDASLHHKLHSTHALQTIADGLPALGIVAAVLGVIKTMASID 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
Q P++LG IG +L GT LG+ L+Y L P +++KS Y ++++ L+A +
Sbjct: 194 QPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAAKVKSVIEDDMHFYRLIREVLVANLYQH 253
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+ IE GR+ P RPS V + + +
Sbjct: 254 ATNICIEVGRQNTPGQYRPSFSEVEEALKAVKQSA 288
>gi|289668314|ref|ZP_06489389.1| flagellar motor protein MotA [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 284
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 91/267 (34%), Positives = 157/267 (58%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETFSGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG +
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGAIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS +
Sbjct: 255 KIALEFARKTLPSNVRPSFGDFETHLK 281
>gi|163744359|ref|ZP_02151719.1| flagellar motor protein [Oceanibulbus indolifex HEL-45]
gi|161381177|gb|EDQ05586.1| flagellar motor protein [Oceanibulbus indolifex HEL-45]
Length = 288
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 87/279 (31%), Positives = 154/279 (55%), Gaps = 2/279 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ ++GL + + GGF GGN I++ P+E +++ GA LG FV+AN V+K S
Sbjct: 1 MTLLLGLVMVFGLVFGGFMLSGGNMDIVLHALPYEGMMIGGASLGAFVIANSFSVVKSSL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ + Y D+L L++ L K + HI++P S IF P +++
Sbjct: 61 GGVVRVIKGPRWKAADYNDLLALMFELARLYKTKGIVAMDEHIENPEASPIFQRYPKLMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ +T I D RM+ + +++E++M+ +I +E L AI M + LPAIGIV
Sbjct: 121 DHFVTDLIADSFRMMSMQFDDRFQMEDVMNRKIKKHHHESLVSASAIQSMADGLPAIGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ + P+ILG IG +L GT LG+ L+Y + P+ +++ + +Y
Sbjct: 181 AAVLGVIKTMSSIDKPPEILGAMIGGALVGTFLGVFLAYCMVQPIAGRLEQIEEEDSAMY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+++ ++A + G P + IE GR +P +++P+ V
Sbjct: 241 TVIRDVIVAIVAGHPPSICIELGRGNIPTTKQPNFSAVE 279
>gi|166713569|ref|ZP_02244776.1| flagellar motor protein MotA [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 284
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/267 (33%), Positives = 158/267 (59%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F +
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLSGIMGVFKGPQYKSED 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS +
Sbjct: 255 KIALEFARKTLPSNVRPSFGDFETHLK 281
>gi|58580311|ref|YP_199327.1| flagellar motor protein MotA [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|78049370|ref|YP_365545.1| flagellar motor protein MotA [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|84622282|ref|YP_449654.1| flagellar motor protein MotA [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188578753|ref|YP_001915682.1| flagellar motor protein MotA [Xanthomonas oryzae pv. oryzae PXO99A]
gi|325926422|ref|ZP_08187747.1| flagellar motor component [Xanthomonas perforans 91-118]
gi|58424905|gb|AAW73942.1| chemotaxis protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|78037800|emb|CAJ25545.1| flagellar motor component MotA [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|84366222|dbj|BAE67380.1| chemotaxis protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188523205|gb|ACD61150.1| flagellar motor component MotA [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|325543211|gb|EGD14649.1| flagellar motor component [Xanthomonas perforans 91-118]
Length = 284
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/267 (33%), Positives = 158/267 (59%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F +
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLSGIMGVFKGPQYKSED 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS +
Sbjct: 255 KIALEFARKTLPSNVRPSFGDFETHLK 281
>gi|66770022|ref|YP_244784.1| flagellar motor protein MotA [Xanthomonas campestris pv. campestris
str. 8004]
gi|66575354|gb|AAY50764.1| chemotaxis protein [Xanthomonas campestris pv. campestris str.
8004]
Length = 284
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 92/267 (34%), Positives = 157/267 (58%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLTGVMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P VL ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGTYPKVLADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPAHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL + +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLPAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS +
Sbjct: 255 KIALEFARKTLPSNVRPSFGDFETHLK 281
>gi|289665511|ref|ZP_06487092.1| flagellar motor protein MotA [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 284
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 90/267 (33%), Positives = 157/267 (58%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETFSGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P ++ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKLVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG +
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGAIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS +
Sbjct: 255 KIALEFARKTLPSNVRPSFGDFETHLK 281
>gi|283784103|ref|YP_003363968.1| lateral flagellar motor protein A [Citrobacter rodentium ICC168]
gi|282947557|emb|CBG87110.1| lateral flagellar motor protein A [Citrobacter rodentium ICC168]
Length = 287
Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats.
Identities = 90/282 (31%), Positives = 151/282 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL + + C+ GG++ GG + QP EIVI+ GAG G ++ NP V+K+
Sbjct: 1 MQKVLGLLVVLGCVFGGYFEAGGQLIAIWQPAEIVIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + G K LG + +L LY L+ ++ G + HI+ P ST+F P VL
Sbjct: 61 IKGVIGKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTVFQKYPQVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D + E L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTVEEELLAPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFFCYCLMDPLANSMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 282
>gi|94986925|ref|YP_594858.1| flagellar motor protein MotA [Lawsonia intracellularis PHE/MN1-00]
gi|94731174|emb|CAJ54536.1| Flagellar motor component [Lawsonia intracellularis PHE/MN1-00]
Length = 282
Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats.
Identities = 101/281 (35%), Positives = 163/281 (58%), Gaps = 1/281 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG FI I IIGG+ GN +L QP E+VI+ GA LG F + +
Sbjct: 1 MYIIIGYFIVIASIIGGYLMAKGNLALLFQPAELVIIIGAALGAFFASQTKYSFTLVIKN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L IFG + Y + L LLY L + + E+ I+ P +S IF+ PT++++
Sbjct: 61 LSHIFGDPNSTKIKYLETLALLYGLFLKMNREGVISIESDIEKPESSPIFSKYPTIVKDT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ FI D +R+ + A +I+NLM+ ++ I E+L P H+ISHM ESLP +GIV A
Sbjct: 121 KVVAFIADTLRVYLTTGA-PEDIDNLMESDMKITHEEELLPAHSISHMAESLPGMGIVAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG +++ P++LG IG +L GT +GI+ Y P+ S+++++ + H Y
Sbjct: 180 VLGVVITMGKINEPPEVLGHYIGAALVGTFIGILFCYGFFGPMGSKLETSAEEAHFYYNS 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K+A+ A + G+ P +A+EYGR+ +P + RPS + + +
Sbjct: 240 IKEAVAAAIRGSTPMIAVEYGRRAIPNTFRPSFSEMEERLK 280
>gi|308273453|emb|CBX30055.1| Chemotaxis protein motA [uncultured Desulfobacterium sp.]
Length = 265
Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats.
Identities = 82/265 (30%), Positives = 151/265 (56%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
GG ++IQP E +I+ GA +G +++ P K++KD ++ + + +Y D+L
Sbjct: 1 MEGGPLAVIIQPVEFMIIGGAAIGALLISAPPKLLKDIIGKIIGTVKGSTISKQSYLDLL 60
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
KL++ + +K E+HI++P S +FT P L N+ + FICD R++++G
Sbjct: 61 KLMFDVFQLSRKDGLIALESHIENPETSNLFTQYPQFLNNHHILHFICDTFRLVVLGGVA 120
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
++++E LMD +I+ +E KP + +G+S+P +GIV A+LGI+ M + P+++G
Sbjct: 121 AHDMEALMDCDIETHHHEGTKPGMILQKIGDSMPGLGIVAAVLGIVITMQAIDGPPEVIG 180
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
+ V+L GT LGI LSY P+ + I ++ +++ ++K +IA+ G P +A+E
Sbjct: 181 HKVAVALVGTFLGIYLSYGFVQPIATNIDMANDEESKIFEVIKSGMIAFAKGLNPIIAVE 240
Query: 260 YGRKVLPLSERPSIEIVAQEVLQYN 284
+ R+ +P RP + + + V N
Sbjct: 241 FARRSIPSDYRPEFQEMEKHVKGKN 265
>gi|304412489|ref|ZP_07394095.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307307148|ref|ZP_07586886.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|304349131|gb|EFM13543.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306910387|gb|EFN40818.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 285
Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats.
Identities = 83/285 (29%), Positives = 149/285 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS ++GL I + + GG+ GG L QP EI+I+ GAG+G ++ANP V+K+
Sbjct: 1 MSKLVGLLIILASVFGGYVWAGGALSALWQPAEILIIMGAGVGALIIANPQSVLKEMFEQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E+F + Y + L+ LM ++ + H+++P S+IF P VL +
Sbjct: 61 LKELFNKGKEDPELYPQLFPLMGTLMAQIQSQGLKVLDEHLENPQQSSIFLMYPAVLNHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G +++E++++EEI I ++L+P A S +GE++P GI+ A
Sbjct: 121 NVLQFLIDNLRVQSIGKISPHDLEHILEEEIHRIEEDRLRPSEAFSKVGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M N+ ++G + +L GT +GI Y +P++ ++ ++
Sbjct: 181 VLGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPMSKALEHLVDRKSAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+ L+ + G P +AI+ GRK + RPS + + +
Sbjct: 241 IAAILVTFSKGKPPMMAIDAGRKQIQSENRPSFIELERWMEGQKS 285
>gi|294624637|ref|ZP_06703309.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292601072|gb|EFF45137.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 284
Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats.
Identities = 91/267 (34%), Positives = 159/267 (59%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G L QP+E++I+ GA LG F+++ P K++K++ ++ +F D
Sbjct: 15 LGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLSGIMGVFKGPQYKSDD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D L L+Y L+ ++ E+H++ P +STIF + P V+ ++ L FI D +R++I
Sbjct: 75 YKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGNYPKVVADHHLLDFITDCLRLMI 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N +E+E L++ E++ +E L P HA+S + + LP GIV A+LGI+ MG++
Sbjct: 135 GSNIEPHELEPLLELELEKHHHEALAPSHALSKVSDGLPGFGIVAAVLGIVITMGSIGGP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ +G +G +L GT LGI+L+Y +PL++ +++ + R+Y VK AL+A + G P
Sbjct: 195 IEEIGHHVGAALVGTFLGILLAYGFVSPLSAAMEARAEQDGRIYEAVKTALLACLRGYNP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEVL 281
++A+E+ RK LP + RPS+ +
Sbjct: 255 KIALEFARKTLPSNVRPSLGDFETHLK 281
>gi|163800114|ref|ZP_02194015.1| flagellar motor protein [Vibrio sp. AND4]
gi|159175557|gb|EDP60351.1| flagellar motor protein [Vibrio sp. AND4]
Length = 285
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 79/285 (27%), Positives = 144/285 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GG + QP E +I+ GA +G ++ NP V+K+
Sbjct: 1 MQKFFGAITILVCVFGGYMWAGGKLGAIWQPAEFLIIIGAAVGSLIIGNPPHVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + Y +++ LL L+ + ++HI+ P S+IFT+ P V ++
Sbjct: 61 LRATISSPREEYEYYMELMALLNNLLETARSRGFKHLDSHIESPEQSSIFTAHPKVSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ GE+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIESIQTEMLLPSRSMQRTGEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLTEQEG 285
>gi|260767947|ref|ZP_05876881.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|260615977|gb|EEX41162.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|315179651|gb|ADT86565.1| flagellar motor protein MotA [Vibrio furnissii NCTC 11218]
Length = 285
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 80/285 (28%), Positives = 146/285 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G I ++C+ GG+ GG+ + QP E +I+AGA LG ++ NP +V+K+
Sbjct: 1 MQKFLGAIIVLMCVFGGYVWAGGSLTAIWQPAEFLIIAGAALGSLIIGNPPQVLKEMRRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + Q Y +++ +L +L+ ++ G + HI+ P S IF P V +
Sbjct: 61 LRMMLSQPKNEQAYYMELMAVLQVLLETVRSGGFKSLDKHIESPDQSPIFARYPLVARDY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EID I + L P ++ E+LP GI+ A
Sbjct: 121 RLVSFITDNLRLMAMGQMSPHELEGLLEQEIDAIQTDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +P ++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPASNAMAQRVKRDMSAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNDMEKWLAEQEG 285
>gi|330447922|ref|ZP_08311570.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492113|dbj|GAA06067.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 285
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 80/285 (28%), Positives = 149/285 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG I I+C+ GG+ GGN + QP E++I+AGA +G ++ NP V+K+ +
Sbjct: 1 MQKFIGAIIIIICVFGGYIWAGGNLRAIWQPAELLIIAGATIGSLIIGNPPHVLKEMRLQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
EI + Y +++ LL L+ ++ ++HI+ P +S IF P + ++
Sbjct: 61 FREILSPNHHEEQYYMELMALLQALLDTVRNNGFKALDSHIESPQSSAIFNRYPLISNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +FI D +R++ +G YE+E L+++EI I + L P ++ E+LP GI+ A
Sbjct: 121 HVISFITDNLRLMAMGQMSPYELEGLLEQEISAIEEDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M + S ++G + +L GT LGI Y + +P ++ + + +
Sbjct: 181 VMGIIITMQAIDGSIAMIGYHVAAALVGTFLGIFGCYCILDPASNAMAQRVKRNMSAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 IRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNEMEKWLTEQEG 285
>gi|167626172|ref|YP_001676466.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167356194|gb|ABZ78807.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 285
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 82/285 (28%), Positives = 154/285 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS ++GL I +L + GG+ GG L QP EI+I+ GAG+G ++ANP V+ +
Sbjct: 1 MSKLLGLVIILLSVFGGYVWAGGALISLWQPAEILIIFGAGIGALIIANPKPVLIEMYEQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E+ + + Y + L+ +LM ++ ++H++ P S++F P VLE+
Sbjct: 61 LKELVRVEREDPELYPQLFGLMNMLMAQIQSQGLRVLDDHVEKPRESSLFLMYPVVLEHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G +++E++++EEI I ++++P HA + + E++P GI+ A
Sbjct: 121 NVLNFLIDNLRLQSIGKLSPHDLEHMLEEEIHRIDEDRMRPSHAFNKVAEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M N+ ++G + +L GT +GI Y + +PL+ ++ +Q
Sbjct: 181 VMGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCIFDPLSKAMEHLVERQSAQMRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V L A+ G P +AI+ GRK + RP+ + + +++
Sbjct: 241 VAAMLTAFAKGKPPMLAIDAGRKQIQSENRPTFIELERWLVEQKS 285
>gi|149189847|ref|ZP_01868127.1| flagellar motor protein MotA [Vibrio shilonii AK1]
gi|148836333|gb|EDL53290.1| flagellar motor protein MotA [Vibrio shilonii AK1]
Length = 285
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 79/285 (27%), Positives = 146/285 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G I ++C+ GG+ GG+ + QP E +I+ GA +G ++ NP +V+K+
Sbjct: 1 MQKFMGAIIILMCVFGGYVWAGGSMMAIWQPAEFLIIIGATVGSLIIGNPPQVLKEMRSQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L I Q Y +++ LL +L+ ++ G + HI++P S IF P V +
Sbjct: 61 LRSIMSPHKDEQAFYMELMALLQVLLETVRSGGFKALDKHIENPEQSPIFNRYPLVSRDY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I + L P ++ E+LP GI+ A
Sbjct: 121 RLVSFITDNLRLMAMGQMSPHELEGLLEQEIEAIESDLLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT LGI Y +P ++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFLGIFGCYCCLDPASNAMAQRVKRDMSAFDC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 IRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMERWLAEQEG 285
>gi|315499554|ref|YP_004088357.1| mota/tolq/exbb proton channel [Asticcacaulis excentricus CB 48]
gi|315417566|gb|ADU14206.1| MotA/TolQ/ExbB proton channel [Asticcacaulis excentricus CB 48]
Length = 288
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 84/284 (29%), Positives = 163/284 (57%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + C+ G + GG+ ++ +E++ + GA + +++N L IK G
Sbjct: 1 MFQIIGIVVLFACVFGSYLLSGGSMAPILHSLAYEMMGIGGAAVASVLISNDLHTIKGMG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++FG Y D+L LL+ L +K E+HI+ P S+IF+ P +++
Sbjct: 61 GGMGKVFGGAKWKPSDYRDLLSLLFQLTKTMKAKGVIALESHIEKPQESSIFSRYPKIMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E + P HA+ + ++LPA+GIV
Sbjct: 121 DHFAIDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEAMHPAHAMQSVADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG +++ P++LG IG +L GT LG++L+Y L P +++ ++ Y
Sbjct: 181 IAVLGVIKTMGAITEPPEVLGGMIGGALVGTFLGVMLAYGLVGPFATRMNGVVEEEAAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
I++ L+A+++G Q+++E GR +P +PS + + +
Sbjct: 241 KIIQAVLVAHLHGNAAQISVEIGRGNIPSGAQPSFAEMEEALNN 284
>gi|312884824|ref|ZP_07744516.1| flagellar motor protein MotA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367476|gb|EFP95036.1| flagellar motor protein MotA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 285
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 143/285 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GGN + QP E +I+ GA +G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLICVFGGYMWAGGNLTAIWQPAEFLIIIGAAIGSLIIGNPPQVLKEMRRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ +++ LL +L+ ++ G + HI+ P S IF+ P + ++
Sbjct: 61 ITLTISGAKQEKEYCMELMALLQVLLETVRSGGFKSLDKHIEAPDESPIFSRYPLIAKDF 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D R++ +G +E+E L+++EID I L P ++ E+LP GI+ A
Sbjct: 121 RLVSFITDNFRLMAMGQMSPHELEGLLEQEIDAIQTNLLLPSKSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMSAIDGSIAMIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVKRDMSAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + Q + +
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMEQWLAEQEG 285
>gi|91223191|ref|ZP_01258457.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|269967119|ref|ZP_06181186.1| chemotaxis LafT protein [Vibrio alginolyticus 40B]
gi|91192004|gb|EAS78267.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|269828256|gb|EEZ82523.1| chemotaxis LafT protein [Vibrio alginolyticus 40B]
Length = 285
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 76/285 (26%), Positives = 145/285 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G+ ++C+ GG+ GG+ + QP E +I+ GA G ++ NP V+K+
Sbjct: 1 MQKFFGVLTILVCVFGGYMWAGGSLGAIWQPAEFLIIIGAAAGSLIIGNPPHVLKEMRRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S++F + PT+ E++
Sbjct: 61 VPATIKGPTEEHEYYMELMALLNNLLETARNRGYKFLDSHIEAPEQSSMFLAYPTIAEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQNEMLLPSRSLQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIAMIGYHVAAALVGTFIGIFGCYCGLDPLSNAMAQRVKRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG 285
>gi|220905441|ref|YP_002480753.1| flagellar motor protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869740|gb|ACL50075.1| flagellar motor protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 282
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 152/283 (53%), Gaps = 1/283 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL I + G+ G IL QP E +I+ G GLG F + S
Sbjct: 1 MYLLIGLAIVAGSVFTGYTLAHGEWGILFQPAEFIIILGCGLGAFFGSQTKYTFGLILKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y + L LLY L + + E+ ++ P +S IF+ P V ++
Sbjct: 61 LKHLFADPGSSKGRYLETLALLYALFSKMHREGVISIESDVEKPESSPIFSKYPNVSKDT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ FI D +R+ + +I++LMD +I + E + P HA+SHM ESLP +GIV
Sbjct: 121 KVVNFIGDTLRVYLTTG-DPADIDSLMDVDITTMREEGILPAHAVSHMAESLPGMGIVAC 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ AMG +++ P++LG IG +L GT GI+ Y L P+ S++++ ++H Y
Sbjct: 180 VLGVVLAMGKINEPPEVLGHYIGAALVGTFFGILCCYGLFGPMGSKLENYVAEEHFYYHS 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
VK+A+ A + G+ P +A+EYGR+ +P RPS + ++
Sbjct: 240 VKEAVAAAIRGSTPLIAVEYGRRAIPYPFRPSFAEMEDKLKSG 282
>gi|260866429|ref|YP_003232831.1| putative lateral flagellar motor protein [Escherichia coli O111:H-
str. 11128]
gi|257762785|dbj|BAI34280.1| predicted lateral flagellar motor protein [Escherichia coli O111:H-
str. 11128]
gi|323178475|gb|EFZ64053.1| chemotaxis protein lafT [Escherichia coli 1180]
Length = 287
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 88/282 (31%), Positives = 148/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVFGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 282
>gi|303325923|ref|ZP_07356366.1| chemotaxis protein MotA [Desulfovibrio sp. 3_1_syn3]
gi|302863839|gb|EFL86770.1| chemotaxis protein MotA [Desulfovibrio sp. 3_1_syn3]
Length = 282
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 88/283 (31%), Positives = 151/283 (53%), Gaps = 1/283 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL I + G+ G +L QP E +I+ G GLG F + S
Sbjct: 1 MYLLIGLAIVAASVFTGYTLAHGEWGVLFQPAEFIIILGCGLGAFFGSQTKYTFSLIVKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y + L LLY L + + E+ ++ P S IF+ P V ++
Sbjct: 61 LKHLFADPGSSKSRYLETLALLYALFSKMHREGVISIESDVEKPEASPIFSKYPNVSKDT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI D +R+ + +I++LMD +I + E + P HA+SHM ES+P +GIV
Sbjct: 121 RIVNFIGDTLRVYLTTG-DPADIDSLMDVDIATMREEGILPAHAVSHMAESMPGMGIVAC 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ AMG +++ P++LG IG +L GT GI+ Y L P+ +++++ ++H Y
Sbjct: 180 VLGVVLAMGKINEPPEVLGHYIGAALVGTFFGILCCYGLFGPMGAKLENFVSEEHFYYHS 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
+K+A+ A + G+ P +A+EYGR+ +P RP+ + +++
Sbjct: 240 IKEAVAAAIRGSTPLIAVEYGRRTIPYPFRPTFAEMEEKLKNG 282
>gi|283851027|ref|ZP_06368312.1| flagellar motor protein MotA [Desulfovibrio sp. FW1012B]
gi|283573673|gb|EFC21648.1| flagellar motor protein MotA [Desulfovibrio sp. FW1012B]
Length = 284
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 84/284 (29%), Positives = 153/284 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG+ + + + GGF GG+ +L QP E++I+ GA LG F ++ P + +
Sbjct: 1 MFVIIGIVVVLGSVFGGFLLEGGHMAVLFQPIELLIIGGAALGSFFISAPKSIALGTFKH 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L +F K Y D+L LL+ L+ ++ E H+ P S P + +N
Sbjct: 61 VLHVFKGKEPAAADYQDLLTLLFELINIARRDGIVALEPHVSKPEQSATINRYPNIAKNR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FICD ++ ++ ++ ++LM +I + + + A++ + ++LP +GIV A
Sbjct: 121 QLAYFICDNIKALLSEGIDAHRYDDLMRTDIATLHHHAMIAPGAVTKVADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG +++ P++LG +IG +L GT LGI+LSY P+ S ++ Q + +
Sbjct: 181 VLGIVLTMGKINEPPEVLGHSIGAALVGTFLGILLSYGFVGPMASNLEYQAKAQQHMLHV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
K+ L A+ +G P +++E GR+ +P RP++E + +
Sbjct: 241 AKEVLAAFNSGFSPMLSVEMGRRAIPDDVRPTMEDMEGALRGKK 284
>gi|269960143|ref|ZP_06174519.1| chemotaxis LafT protein [Vibrio harveyi 1DA3]
gi|269835114|gb|EEZ89197.1| chemotaxis LafT protein [Vibrio harveyi 1DA3]
Length = 285
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 143/285 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GGN + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLMCVFGGYMWAGGNLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF + P V ++
Sbjct: 61 VRATISGPREEYEYYMELMALLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPQVSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG 285
>gi|59889799|emb|CAH19155.1| Lateral flagellar motor protein A (MotA-like) [Escherichia coli]
gi|284920063|emb|CBG33120.1| lateral flagellar motor protein A (MotA-like) [Escherichia coli
042]
Length = 287
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 88/282 (31%), Positives = 149/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIIWGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 282
>gi|89068742|ref|ZP_01156128.1| chemotaxis MotA protein [Oceanicola granulosus HTCC2516]
gi|89045705|gb|EAR51767.1| chemotaxis MotA protein [Oceanicola granulosus HTCC2516]
Length = 288
Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 92/284 (32%), Positives = 152/284 (53%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI--QPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ +G+ + + GGF GG I++ P+E +++ GA LG FV+AN V+K S
Sbjct: 1 MNLFLGIALVFGLVFGGFILSGGKLDIVLYALPYEGMMIGGAALGAFVIANSFGVLKGSA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++++ Y D+L LLY L K + H+++P +S IF P +L+
Sbjct: 61 IGMMKVITGPRWKAADYSDLLNLLYELSRLYKSKGILALDEHVENPKDSEIFKRYPKILK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ T I D RM+ + Y+ E++++ +I +E L P A+S M + LPAIGIV
Sbjct: 121 DHFATELITDSFRMLSMNFDDQYQTEDVINRKIKKHHHESLAPASAVSVMADGLPAIGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M L Q P +LG IG +L GT LG+ L+Y L P++ ++K + Y
Sbjct: 181 AAVLGVIKTMSALDQPPDVLGKMIGGALVGTFLGVFLAYCLVAPISGRLKQIEEEDGTFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+I++ +A + P + IE GR +P S++P V +
Sbjct: 241 LIIRDVFVAMVAKHPPNICIEIGRGNIPTSKQPDFYKVEAAQKE 284
>gi|84502393|ref|ZP_01000529.1| chemotaxis MotA protein [Oceanicola batsensis HTCC2597]
gi|84389205|gb|EAQ02002.1| chemotaxis MotA protein [Oceanicola batsensis HTCC2597]
Length = 288
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 148/284 (52%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ +GL + + GGF GG I++ PFE +++ GA LG FV+AN VIK SG
Sbjct: 1 MTMFLGLAMVFGLVFGGFMLSGGKMDIVLHALPFEGMMIGGAALGSFVIANSFTVIKASG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++ Y D+L L+Y L K ++HI++P S IF P +L+
Sbjct: 61 KGVGKVIKGPKWKAKDYNDLLALMYELTRLYKAKGVLALDDHIENPEGSEIFGRYPRILK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ I D RM+ + Y E++++ +I +E L+ HAI M + LPAIGIV
Sbjct: 121 DHFAIDLIRDSFRMLSMQFDDKYATEDVINRKIKKHHHESLEAAHAIQTMADGLPAIGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P++LG IG +L GT LG+ L+Y + P++ ++ + Y
Sbjct: 181 AAVLGVIKTMSSIDQPPEVLGAMIGGALVGTFLGVFLAYCMVQPISGRLTQIEDEDGAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+++ +A ++ P + +E GR +P +P V +
Sbjct: 241 HVIRDIFVAMVSNQPPNICVEIGRGNIPTRMQPDFYEVEAAQKE 284
>gi|188592086|ref|YP_001796684.1| mota: chemotaxis protein; proton conductor component of motor,
torque generator [Cupriavidus taiwanensis LMG 19424]
gi|170938460|emb|CAP63447.1| MotA: chemotaxis protein; proton conductor component of motor,
torque generator [Cupriavidus taiwanensis LMG 19424]
Length = 287
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 98/268 (36%), Positives = 156/268 (58%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
+ GG+ L QP E+VI+AGA +G F+ N K IK + +L +F ++ Y D
Sbjct: 18 YAMTGGHMGALYQPAEVVIIAGAAIGAFIATNTGKAIKATARALPGLFKSSKYKKELYLD 77
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
V+ LLY+L+ ++ E I DP S++F+ P +L + + F+ DY+RM++ GN
Sbjct: 78 VMSLLYVLLSKARREGILFLEKEIADPAASSVFSQYPRILSDPVVMEFLTDYLRMMVNGN 137
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
++EIE LMD EI+ +E P HA+S +G+ LPA GIV A++G++ A+G+ P
Sbjct: 138 MNAFEIEALMDHEIETFRHEAEIPAHALSRVGDGLPAFGIVAAVMGVVHALGSADLPPAE 197
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
LG I ++ GT LGI+L+Y +PL ++I+ + ++Y +K L+A +NG P VA
Sbjct: 198 LGALIAHAMVGTFLGILLAYGFISPLAARIELQVSENVKVYECIKVVLLASLNGYAPLVA 257
Query: 258 IEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+E+GRKVL + RPS + V +
Sbjct: 258 VEFGRKVLYSTVRPSFLELDDHVREVKS 285
>gi|170021343|ref|YP_001726297.1| flagellar motor protein MotA [Escherichia coli ATCC 8739]
gi|188495414|ref|ZP_03002684.1| chemotaxis protein LafT [Escherichia coli 53638]
gi|218703544|ref|YP_002411063.1| flagellar motor protein MotA [Escherichia coli UMN026]
gi|256020245|ref|ZP_05434110.1| flagellar motor protein MotA [Shigella sp. D9]
gi|260853483|ref|YP_003227374.1| putative lateral flagellar motor protein [Escherichia coli O26:H11
str. 11368]
gi|293403375|ref|ZP_06647466.1| flagellar motor protein MotA [Escherichia coli FVEC1412]
gi|293408385|ref|ZP_06652224.1| conserved hypothetical protein [Escherichia coli B354]
gi|298378987|ref|ZP_06988868.1| flagellar motor protein MotA [Escherichia coli FVEC1302]
gi|300817252|ref|ZP_07097470.1| flagellar motor protein MotA [Escherichia coli MS 107-1]
gi|300899472|ref|ZP_07117720.1| flagellar motor protein MotA [Escherichia coli MS 198-1]
gi|307136894|ref|ZP_07496250.1| flagellar motor protein MotA [Escherichia coli H736]
gi|307313502|ref|ZP_07593123.1| MotA/TolQ/ExbB proton channel [Escherichia coli W]
gi|331640758|ref|ZP_08341893.1| chemotaxis MotA protein [Escherichia coli H736]
gi|331666563|ref|ZP_08367437.1| chemotaxis MotA protein [Escherichia coli TA271]
gi|331671821|ref|ZP_08372617.1| chemotaxis MotA protein [Escherichia coli TA280]
gi|332281407|ref|ZP_08393820.1| lateral flagellar motor protein A [Shigella sp. D9]
gi|169756271|gb|ACA78970.1| MotA/TolQ/ExbB proton channel [Escherichia coli ATCC 8739]
gi|188490613|gb|EDU65716.1| chemotaxis protein LafT [Escherichia coli 53638]
gi|218430641|emb|CAR11507.1| Chemotaxis protein lafT, Lateral flagellar motor protein A
(MotA-like) [Escherichia coli UMN026]
gi|257752132|dbj|BAI23634.1| predicted lateral flagellar motor protein [Escherichia coli O26:H11
str. 11368]
gi|291429228|gb|EFF02248.1| flagellar motor protein MotA [Escherichia coli FVEC1412]
gi|291471563|gb|EFF14046.1| conserved hypothetical protein [Escherichia coli B354]
gi|298280100|gb|EFI21604.1| flagellar motor protein MotA [Escherichia coli FVEC1302]
gi|300356951|gb|EFJ72821.1| flagellar motor protein MotA [Escherichia coli MS 198-1]
gi|300530228|gb|EFK51290.1| flagellar motor protein MotA [Escherichia coli MS 107-1]
gi|306906670|gb|EFN37181.1| MotA/TolQ/ExbB proton channel [Escherichia coli W]
gi|315059559|gb|ADT73886.1| proton conductor component of flagella motor [Escherichia coli W]
gi|315616808|gb|EFU97425.1| chemotaxis protein lafT [Escherichia coli 3431]
gi|323158086|gb|EFZ44185.1| chemotaxis protein lafT [Escherichia coli EPECa14]
gi|323171083|gb|EFZ56732.1| chemotaxis protein lafT [Escherichia coli LT-68]
gi|323181564|gb|EFZ66984.1| chemotaxis protein lafT [Escherichia coli 1357]
gi|323379882|gb|ADX52150.1| MotA/TolQ/ExbB proton channel [Escherichia coli KO11]
gi|331037556|gb|EGI09776.1| chemotaxis MotA protein [Escherichia coli H736]
gi|331065787|gb|EGI37671.1| chemotaxis MotA protein [Escherichia coli TA271]
gi|331070810|gb|EGI42169.1| chemotaxis MotA protein [Escherichia coli TA280]
gi|332103759|gb|EGJ07105.1| lateral flagellar motor protein A [Shigella sp. D9]
Length = 287
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 88/282 (31%), Positives = 149/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 282
>gi|331645435|ref|ZP_08346539.1| chemotaxis MotA protein [Escherichia coli M605]
gi|323191389|gb|EFZ76651.1| chemotaxis protein lafT [Escherichia coli RN587/1]
gi|331045597|gb|EGI17723.1| chemotaxis MotA protein [Escherichia coli M605]
Length = 287
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 90/282 (31%), Positives = 149/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP EIVI+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLIAIWQPAEIVIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 282
>gi|28901411|ref|NP_801066.1| flagellar motor protein MotA [Vibrio parahaemolyticus RIMD 2210633]
gi|153835868|ref|ZP_01988535.1| chemotaxis protein LafT [Vibrio parahaemolyticus AQ3810]
gi|260362965|ref|ZP_05775834.1| chemotaxis protein LafT [Vibrio parahaemolyticus K5030]
gi|260880252|ref|ZP_05892607.1| chemotaxis protein LafT [Vibrio parahaemolyticus AN-5034]
gi|260895369|ref|ZP_05903865.1| chemotaxis protein LafT [Vibrio parahaemolyticus Peru-466]
gi|260901194|ref|ZP_05909589.1| chemotaxis protein LafT [Vibrio parahaemolyticus AQ4037]
gi|417237|sp|Q03477|LAFT_VIBPA RecName: Full=Chemotaxis protein LafT
gi|677909|gb|AAA62354.1| LafT [Vibrio parahaemolyticus]
gi|1518953|gb|AAB07357.1| lateral flagellar MotA [Vibrio parahaemolyticus]
gi|28809958|dbj|BAC62899.1| chemotaxis LafT protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149750622|gb|EDM61367.1| chemotaxis protein LafT [Vibrio parahaemolyticus AQ3810]
gi|308085587|gb|EFO35282.1| chemotaxis protein LafT [Vibrio parahaemolyticus Peru-466]
gi|308092231|gb|EFO41926.1| chemotaxis protein LafT [Vibrio parahaemolyticus AN-5034]
gi|308109320|gb|EFO46860.1| chemotaxis protein LafT [Vibrio parahaemolyticus AQ4037]
gi|308112021|gb|EFO49561.1| chemotaxis protein LafT [Vibrio parahaemolyticus K5030]
gi|328469345|gb|EGF40291.1| flagellar motor protein MotA [Vibrio parahaemolyticus 10329]
Length = 285
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 143/285 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G+ ++C+ GG+ GG + QP E +I+ GA G ++ NP V+K+
Sbjct: 1 MQKFLGVLTILVCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPHVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF P V E++
Sbjct: 61 VPATIKGPTEEYEYYMELMALLNNLLETARSRGFKFLDSHIEAPEQSSIFLMYPLVSEDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQNELLLPSRSLQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCGLDPLSNAMAQRVKRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG 285
>gi|307293779|ref|ZP_07573623.1| chemotaxis MotA protein [Sphingobium chlorophenolicum L-1]
gi|306879930|gb|EFN11147.1| chemotaxis MotA protein [Sphingobium chlorophenolicum L-1]
Length = 287
Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 87/280 (31%), Positives = 153/280 (54%), Gaps = 4/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + + GGF GG+ ++ P E++I+ GA +G ++ N +K G
Sbjct: 1 MFAIIGLVVLLAMVFGGFIFTGGDIGPVLHALPHEMLIIGGAAVGALIIGNSGADLKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F + + D + L+ LM L+ E HI+DP +STIF+ P ++
Sbjct: 61 GGLGKVFKGPKYKKQDFLDCIFLVSKLMKTLRVEGPVALEPHIEDPASSTIFSEYPRLMG 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ L I D +R+++V G + +E +MD + +E LKP + + ++LPA+G
Sbjct: 121 DKTLIHLISDTLRLVVVSSGTLDPHAVEEVMDNALKTHHHESLKPADNLQGLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P +LG IG +L GT LG++L+Y + NP ++ ++
Sbjct: 181 IVAAVLGVVKTMGSIDQPPAVLGAMIGSALVGTFLGVLLAYGMVNPFANRCRAVIEADGS 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+Y +VK+ ++A ++G + IE R L + +P+ V
Sbjct: 241 MYHVVKQIIVASLHGHPQPLVIEAARSSLTHANQPAFAEV 280
>gi|300936145|ref|ZP_07151084.1| flagellar motor protein MotA [Escherichia coli MS 21-1]
gi|300458723|gb|EFK22216.1| flagellar motor protein MotA [Escherichia coli MS 21-1]
Length = 287
Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 149/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP EIVI+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEIVIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P ST+F P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTVFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 282
>gi|170681048|ref|YP_001742390.1| flagellar motor protein MotA [Escherichia coli SMS-3-5]
gi|306813286|ref|ZP_07447479.1| flagellar motor protein MotA [Escherichia coli NC101]
gi|170518766|gb|ACB16944.1| lateral flagellar motor protein A [Escherichia coli SMS-3-5]
gi|305854049|gb|EFM54488.1| flagellar motor protein MotA [Escherichia coli NC101]
Length = 287
Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 87/282 (30%), Positives = 149/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P ST+F P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTVFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 282
>gi|323976252|gb|EGB71345.1| chemotaxis protein MotA [Escherichia coli TW10509]
gi|327254573|gb|EGE66189.1| chemotaxis protein lafT [Escherichia coli STEC_7v]
Length = 287
Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 87/282 (30%), Positives = 149/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P +L
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLILTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 282
>gi|103488395|ref|YP_617956.1| flagellar motor protein MotA [Sphingopyxis alaskensis RB2256]
gi|98978472|gb|ABF54623.1| flagellar motor protein [Sphingopyxis alaskensis RB2256]
Length = 287
Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats.
Identities = 89/280 (31%), Positives = 152/280 (54%), Gaps = 4/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M ++G+ + IL + GGF GGN ++ P E++I+ GA LG ++ N +K
Sbjct: 1 MFPVVGIVVLILLVFGGFALTGGNLGPVMHALPHEMLIIGGAALGSLIIGNSGADLKALA 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F + Y D + L+ LM ++ E HI+DP NSTIF P +L+
Sbjct: 61 GGLGKVFKGPQYKKQDYLDCILLVSSLMKMMRTEGPVAVEPHIEDPKNSTIFQQYPKLLK 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
++ L ICD +R+++V G + +E +MD + + +KP + + ++LPA+G
Sbjct: 121 DDTLVHLICDTLRLVVVSSGTLDPHAVEEVMDNALKSHHHHSMKPADGLQSLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ + P+ILG IG +L GT LG++L+Y L P ++ ++
Sbjct: 181 IVAAVLGVVKTMGSIDKPPEILGAMIGSALVGTFLGVLLAYGLVGPFATRARTVIESDGA 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+Y VK+ +IA ++G + IE R + +PS V
Sbjct: 241 IYHTVKQLIIASLHGHPQPLVIEAARSGVDHHNQPSFAEV 280
>gi|156976179|ref|YP_001447085.1| flagellar motor protein MotA [Vibrio harveyi ATCC BAA-1116]
gi|156527773|gb|ABU72858.1| hypothetical protein VIBHAR_04950 [Vibrio harveyi ATCC BAA-1116]
Length = 285
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 76/285 (26%), Positives = 142/285 (49%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GG + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLMCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF + P V ++
Sbjct: 61 VRATISGPRQEYEYYMELMALLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPKVSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 VRATLVAYVTKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG 285
>gi|153831609|ref|ZP_01984276.1| chemotaxis protein LafT [Vibrio harveyi HY01]
gi|148872119|gb|EDL70936.1| chemotaxis protein LafT [Vibrio harveyi HY01]
Length = 285
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 76/285 (26%), Positives = 142/285 (49%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G ++C+ GG+ GG + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLMCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF + P V ++
Sbjct: 61 VRATISGPRQEYEYYMELMALLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPQVSNDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG 285
>gi|294013094|ref|YP_003546554.1| chemotaxis MotA protein [Sphingobium japonicum UT26S]
gi|292676424|dbj|BAI97942.1| chemotaxis MotA protein [Sphingobium japonicum UT26S]
Length = 287
Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats.
Identities = 87/280 (31%), Positives = 153/280 (54%), Gaps = 4/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + + GGF GG+ ++ P E++I+ GA +G ++ N +K G
Sbjct: 1 MFAIIGLVVLLAMVFGGFIFTGGDIGPVLHALPHEMIIIGGAAVGALIIGNSGSDLKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F + + D + L+ LM L+ E HI+DP +STIF+ P ++
Sbjct: 61 GGLGKVFKGPKYKKQDFLDCIFLVSKLMKTLRVEGPVALEPHIEDPASSTIFSEYPRLMG 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ L I D +R+++V G + +E +MD + +E L+P + + ++LPA+G
Sbjct: 121 DKTLIHLISDTLRLVVVSSGTLDPHAVEEVMDNALKTHHHEALRPADNLQGLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P ILG IG +L GT LG++L+Y + NP ++ ++
Sbjct: 181 IVAAVLGVVKTMGSIDQPPAILGGMIGSALVGTFLGVLLAYGMVNPFANRCRAVIEADGS 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+Y +VK+ ++A ++G + IE R L + +P+ V
Sbjct: 241 MYHVVKQIIVASLHGHPQPLVIEAARSSLTHANQPAFAEV 280
>gi|115523170|ref|YP_780081.1| flagellar motor protein MotA [Rhodopseudomonas palustris BisA53]
gi|115517117|gb|ABJ05101.1| chemotaxis protein [Rhodopseudomonas palustris BisA53]
Length = 283
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 135/270 (50%), Positives = 190/270 (70%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
MGG+ ++ QP+E VI+ G LG +++ANP KV+ DSG ++++ Q Y D+L
Sbjct: 1 MGGHIGVIWQPWEFVIICGMALGTYIVANPWKVVLDSGTAVVQALTMAVPKQRHYLDLLG 60
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
LL+ LM ++ RNE E HIDDP +S IF + PTVL N LT F+ DY R++++G+AR
Sbjct: 61 LLHALMREVRNKGRNEVEAHIDDPASSEIFQNFPTVLANASLTGFVSDYFRLLVMGSARP 120
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
+EIE LMDEEI I+ K+KPY ++ + E LPA+GIV A+LG+IKAMG L QSPK+LG
Sbjct: 121 HEIEALMDEEIQTIVRSKMKPYSSMMMVAEGLPALGIVAAVLGVIKAMGALDQSPKLLGG 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
IG +L GT GI LSYSL PL +++K+ R +Q RLY+IVK+ L+A+MNGA+PQ+AIE+
Sbjct: 181 FIGSALVGTFAGIFLSYSLVAPLAAKVKAVREQQCRLYVIVKQTLLAFMNGALPQIAIEH 240
Query: 261 GRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
GRK++ +ERPSI++V E + K A+
Sbjct: 241 GRKMIGPNERPSIDVVESETISGGPAKAAA 270
>gi|326404290|ref|YP_004284372.1| chemotaxis protein MotA [Acidiphilium multivorum AIU301]
gi|325051152|dbj|BAJ81490.1| chemotaxis protein MotA [Acidiphilium multivorum AIU301]
Length = 289
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 96/286 (33%), Positives = 162/286 (56%), Gaps = 2/286 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M T+ G+ ++C+ G F GG L++ PFE++ + GA +G FV N + IK +
Sbjct: 1 MLTLGGVAFLLVCVFGVFIVTGGAIGPLLKSMPFELITIGGAAVGTFVAGNSMHDIKHTL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ A + Y D+L LL+ L+ E HI+ P S +F P +L+
Sbjct: 61 AGFKKVLRGGAFKKADYTDLLCLLFYLVRLAATRGAMALEPHIERPEESPVFKHFPAILK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N E T ICDY+RM+ + ++IE++M E+ L E+L H + M + LPA+GIV
Sbjct: 121 NEEATAIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELHGAHTLQTMADGLPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++SQ P +LG IG +LTGT LG++L+Y + PL+ +++ + R +
Sbjct: 181 AAVLGVIKTMAHISQPPAVLGEMIGEALTGTFLGVLLAYGVVGPLSVRLRGVVEEDSRYF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+++ L+A+++G PQV++E GRK++P P+ + + + V
Sbjct: 241 EVIRAVLVAHLHGNAPQVSVEVGRKMVPNLFMPTFQELEESVESLK 286
>gi|283834437|ref|ZP_06354178.1| chemotaxis MotA protein [Citrobacter youngae ATCC 29220]
gi|291069984|gb|EFE08093.1| chemotaxis MotA protein [Citrobacter youngae ATCC 29220]
Length = 287
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 150/282 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I GL + + C+ GG++ GG + QP EI+I+ GAGLG ++ NP+ V+K+
Sbjct: 1 MQKIFGLLVVLGCVFGGYFEAGGQLIAIWQPAEIIIIVGAGLGAMIIGNPVHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K +G + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKKMGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 241 VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 282
>gi|212637802|ref|YP_002314327.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212559286|gb|ACJ31740.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 285
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 81/282 (28%), Positives = 154/282 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS ++GL I I + GG+ GG L QP EI+I+ GAG+G ++ANP V+ +
Sbjct: 1 MSKLLGLVIIIFSVFGGYVWAGGTLASLWQPAEILIIFGAGVGALIIANPKPVLVEMYDQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E+ + + Y + L+ +LM ++ ++H++ P S++F PTVLE+
Sbjct: 61 LRELVTIEKEDPELYPQLFGLMGMLMTQIQSQGLKVLDDHVEKPRESSLFLMYPTVLEHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G ++++E+++DEEI + + ++P A++ + E++P GI+ A
Sbjct: 121 TVLQFLIDNLRLQSIGKLSAHDLEHILDEEIHRMEEDWMRPSLALNKVAEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M N+ ++G + +L GT +GI Y L +PL+ ++ ++
Sbjct: 181 VMGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCLFDPLSKALEHLVERKAAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V L ++ G P +AI+ GRK + RP+ + + +++
Sbjct: 241 VAAMLTSFAKGKPPMLAIDAGRKQIQSENRPTFVELERWMVE 282
>gi|46581012|ref|YP_011820.1| flagellar motor protein MotA [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601692|ref|YP_966092.1| flagellar motor protein MotA [Desulfovibrio vulgaris DP4]
gi|46450433|gb|AAS97080.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|120561921|gb|ABM27665.1| chemotaxis protein MotA [Desulfovibrio vulgaris DP4]
gi|311234696|gb|ADP87550.1| flagellar motor protein MotA [Desulfovibrio vulgaris RCH1]
Length = 281
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 86/281 (30%), Positives = 159/281 (56%), Gaps = 1/281 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL + IIGG+ GN +L+QP E++I+ GA +G F+ + + +
Sbjct: 1 MFIIIGLVVVFGSIIGGYLIANGNLAVLVQPAEMIIILGAAMGAFLASQTKYTLGLVIKN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IFG + + Y + L LL L + + E I+ P +S IFT P++ ++
Sbjct: 61 IKHIFGDPGMNKARYLETLALLNSLFSKMHREGVISIEQDIEKPESSAIFTKYPSISKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI D +R+ + +IE+LM +++ + E++ A++ M ESLP +GIV A
Sbjct: 121 HIVHFIGDTLRVYLTTG-DPSDIESLMKIDMESMHEEEMVAPGAVNRMAESLPGMGIVAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG +++ P+ILG IG +L GT +GI+ Y + P+ +++++ + H Y +
Sbjct: 180 VLGVVLTMGMINEPPEILGHHIGAALVGTFVGILFCYGIFGPMAAKLENHAHEMHAYYNV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+K+ + A + G+ P +A+EYGR+ +P + RP+ + +++
Sbjct: 240 IKEGVAAAIRGSTPIIAVEYGRRAIPHAFRPTFAEMEEKLK 280
>gi|87121903|ref|ZP_01077788.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86162701|gb|EAQ63981.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 278
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 91/278 (32%), Positives = 152/278 (54%)
Query: 7 LFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFG 66
+ I I ++ G+ A G L QPFE++I+ G+ LG F++ANP + K L + F
Sbjct: 1 MIIVIASVVTGYMASHGEMMALWQPFEVLIICGSALGAFMVANPWHLQKRILKLLPQAFL 60
Query: 67 YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFI 126
+ Y ++ L+Y L + ++ E+HI+ PY S +F S P +L + E+ FI
Sbjct: 61 GSRHNERYYMGLMALMYTLFFRSRQEGFLAIEDHIEAPYESELFQSFPDLLRDQEMVEFI 120
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
D R+ I+ ++E E ++D EI+ I + + P HA++ + E+LP GIV A+LGI+
Sbjct: 121 TDNYRIFILTGLPAHEFEAIIDAEIEKIAEDLVAPGHAVNKVAEALPGFGIVAAVLGIVI 180
Query: 187 AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
MG++ + +G + +L GT LG+ +Y PL ++ + + Y VK +L+
Sbjct: 181 TMGSIGGPMEEIGYHVAAALVGTFLGVFFAYGFVGPLAGHLEGLGEHELKAYNAVKASLV 240
Query: 247 AYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+ ++G P A+E GRK+LP ERPS +A+ V Y
Sbjct: 241 STVSGFSPGAAVETGRKLLPSEERPSFAELAEYVRTYR 278
>gi|159045800|ref|YP_001534594.1| flagellar motor protein MotA [Dinoroseobacter shibae DFL 12]
gi|157913560|gb|ABV94993.1| chemotaxis protein MotA [Dinoroseobacter shibae DFL 12]
Length = 289
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 82/272 (30%), Positives = 147/272 (54%), Gaps = 3/272 (1%)
Query: 18 FYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
+ A GG I+++ PFE+ ++ GA +G FV+ N + IK + + ++F Y
Sbjct: 18 YLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTLKDVKKVFKGPTWLAQDY 77
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
D+L LL+ L+ ++ + E HI+DP S IF+ P ++ + E I D MR +
Sbjct: 78 KDLLCLLFELIRLARQ-NPVGLEEHIEDPAASNIFSKYPKIMADREAIDLIADTMRSAAM 136
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
+++E ++++ I+ + HA+ + + LPA+GIV A+LG+IK MG++ Q P
Sbjct: 137 NYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIVAAVLGVIKTMGSIDQPP 196
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ILG IG +L GT LG+ L+Y L P ++++KS + Y+++++ L+A ++
Sbjct: 197 EILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHFYLLIREVLVANLHKHTVN 256
Query: 256 VAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
IE GR+ P RP+ + + + Q
Sbjct: 257 NCIEVGRQNTPSHIRPTFSDLEEALKQLKQEA 288
>gi|94495403|ref|ZP_01301983.1| flagellar motor protein [Sphingomonas sp. SKA58]
gi|94424791|gb|EAT09812.1| flagellar motor protein [Sphingomonas sp. SKA58]
Length = 287
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 88/280 (31%), Positives = 152/280 (54%), Gaps = 4/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + + GGF GG+ ++ P E++I+ GA +G ++ N +K G
Sbjct: 1 MFAIIGLVVLLGMVFGGFIFTGGDIGPVLHALPHEMLIIGGAAVGALIIGNSGADLKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F A + + D + L+ LM L+ E HI+DP S IF P +++
Sbjct: 61 GGLAKVFKGPAYKKQDFLDCIFLVSKLMKTLRVEGPVALEPHIEDPGTSPIFAEYPKLMK 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ L I D +R+++V G + +E +MD + +E LKP + + ++LPA+G
Sbjct: 121 DKTLIHLISDTLRLVVVSSGTLDPHAVEEVMDNSLKTHHHEALKPADNLQGLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P +LG IG +L GT LG++L+Y + NP ++ ++ +
Sbjct: 181 IVAAVLGVVKTMGSIDQPPSVLGAMIGSALVGTFLGVLLAYGMVNPFANRCRTVIEQDGA 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+Y +VK+ +IA ++G + IE R L + +P V
Sbjct: 241 IYHVVKQIIIASLHGHPQPLVIEAARSSLIHANQPGFAEV 280
>gi|302384262|ref|YP_003820085.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
gi|302194890|gb|ADL02462.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
Length = 289
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 89/289 (30%), Positives = 164/289 (56%), Gaps = 2/289 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + G + GG ++ P E++ + GA + F+++N + V+K S
Sbjct: 1 MFQIIGLVLLFGMVFGSYAISGGKFDVITHAAPHELMAIGGAAVAAFLISNSIGVVKSSL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ + F + Y D+L LL+ L +K E+HI+ P STIF P VL+
Sbjct: 61 GGIGKAFAGPKWKKQDYKDLLSLLFALTKTMKSKGVIALESHIEKPGESTIFQKYPKVLK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ T FICD +RM+ + ++IE+ M+++++ +E HA+ M ++LPA+GIV
Sbjct: 121 DHFATDFICDTLRMMTMNLEDPHQIEDAMEKQLEKHHHEAAAAPHALQGMADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P++LG IG +L GT +G+ L+Y + PL +++++ ++ Y
Sbjct: 181 AAVLGVIKTMGSITEPPEVLGGMIGGALVGTFMGVFLAYGIVGPLAARLQAIVDEEAAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
I++ L+A+++G Q+++E GR +P S +PS + + +
Sbjct: 241 KIIQSVLVAHLHGNAAQISVEIGRGDIPSSAQPSFLEMEESLSAAPAEA 289
>gi|209963561|ref|YP_002296476.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
gi|7025362|gb|AAF35850.1|AF220005_1 lateral flagellar motor protein MotA [Rhodospirillum centenum]
gi|209957027|gb|ACI97663.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
Length = 294
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 102/280 (36%), Positives = 165/280 (58%), Gaps = 4/280 (1%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GGF A+GGN +L QPFE++I+ G +G FV+ANP +V +D+ ++L E+F Q
Sbjct: 15 LGGFAALGGNLGVLWQPFEVLIICGGAVGAFVIANPSQVRRDTVLALRELFRGTRRKQGD 74
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y D+L LY ++ + E I+ P +S IF P+VL + F+ DY+R++
Sbjct: 75 YLDLLGALYTVLRMARTKGLLSLEKDIERPEDSQIFQQFPSVLGHERAMRFLTDYLRLMS 134
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+G RS+E+E LM+EE+ + E + HA+ + E LPA+GIV A+LG+IKAMG+++
Sbjct: 135 LGADRSHEMEALMEEELSTLQKELQRVSHALHVVAEGLPALGIVAAVLGMIKAMGSIAAP 194
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
P++LG IG +L GT +G++LSY PL R ++ + + +K L AY++G+ P
Sbjct: 195 PEVLGHMIGGALVGTFMGVLLSYGFIGPLAGAAHRMRDEELKYFQCMKAGLTAYLHGSAP 254
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQ----EVLQYNHNKKAS 290
+ +E+ RKVL +PS V + + +KA+
Sbjct: 255 AICVEHARKVLYSEVQPSFYDVEEVTTAAAARLTERQKAA 294
>gi|13446370|gb|AAK20926.1| LafT [Aeromonas hydrophila]
Length = 284
Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 80/282 (28%), Positives = 148/282 (52%), Gaps = 1/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IGL + + F GG P L QP E++I+ GA +G + N +V+ +
Sbjct: 1 MQKQIGL-GSFSFVCWCFMMAGGKPIALWQPAELIIIIGAAVGSMFLGNSKEVMHEMWRQ 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F ++ Y ++L L++ L+ + + HI++P S++F P + E+
Sbjct: 60 MRQCFKSNKDEKEIYRELLTLMHQLLEETRNKGMKALDEHIENPQQSSVFLMYPQISEDP 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D +R++ +G +E++ ++++EI I + LKP HA+ GE+ P GI+ A
Sbjct: 120 QLLGFIIDNLRLLGMGKITPHELDTMLEQEIMAIEEDMLKPAHALHKTGEACPGFGILAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L +G + +L GT +GI L Y L P+++ ++ ++ L +
Sbjct: 180 VMGIIITMQQLDGPLSNIGVHVAAALVGTFIGIFLCYCLLEPISNAMEEMVKRRIGLLMC 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K LIA + G P ++++ GRK+L ++PS + + V
Sbjct: 240 IKSILIAQLRGKTPLISVDSGRKMLEPDDKPSFLELEEWVTN 281
>gi|157147078|ref|YP_001454397.1| flagellar motor protein MotA [Citrobacter koseri ATCC BAA-895]
gi|157084283|gb|ABV13961.1| hypothetical protein CKO_02855 [Citrobacter koseri ATCC BAA-895]
Length = 287
Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 85/287 (29%), Positives = 149/287 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G+ I + C++GGF GG+ QP EI+I+ GAGLG V+ANP V+ +
Sbjct: 1 MQKFLGILIIMGCVVGGFILSGGHLASFWQPGEIIIILGAGLGAMVLANPKAVLSEMYRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
I + +L LLY L+ ++ G + HI+ P NS +F P +L +
Sbjct: 61 FRGIMRKNEYTDEYQRQLLMLLYELLELVQDGGLKVLDEHIEAPENSALFQKYPLMLHDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E ++++E+ + L+P ++ E++P GI A
Sbjct: 121 ALVTFISDNFRLMAMGKINEHELEGILEQELVAMEENLLQPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ Y L +P+ + ++ KQ +
Sbjct: 181 VLGIIITMQSIDGSIAVIGVKVAAALVGTFLGVFFCYCLMDPVANAMEQRTKKQISVLEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
V+ L+ ++ G +A++ GRK+LP+ +P+ + V Q +
Sbjct: 241 VRTVLVNHVAGKPTLLAVDAGRKMLPMDTKPTFATLDGWVNQMMGDA 287
>gi|315126000|ref|YP_004068003.1| LafT [Pseudoalteromonas sp. SM9913]
gi|315014514|gb|ADT67852.1| LafT [Pseudoalteromonas sp. SM9913]
Length = 287
Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats.
Identities = 87/284 (30%), Positives = 155/284 (54%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL + + ++GGF GGN + QP+E +I+ GAGLG ++ N V+ +
Sbjct: 1 MQRVIGLIVVLATVLGGFAFAGGNIATMWQPYEFLIIFGAGLGALIVGNSKYVLTEMLSQ 60
Query: 61 LLEIF--GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L F G + Y D+L ++Y L+ + + H+++P S+IF + P V E
Sbjct: 61 LKYQFISGKGTDTSELYHDLLLVIYSLLDLARVKGIKGLDEHVENPETSSIFLAYPKVYE 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+L TFICD +R+ +G S++ + ++++EI I ++LKP H+++++ E++P GI+
Sbjct: 121 FPQLVTFICDNLRLFSMGKINSHDFDAMLEQEIYTIEEQRLKPSHSLANIAEAMPGFGIL 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+ GII M +L +G + +L GT +GI Y L PL S ++ KQ ++
Sbjct: 181 AAVGGIIITMQHLDGPLSEIGYHVAAALVGTFIGIFACYCLIAPLASAMEQYVKKQVAMF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+A+ G +P VA + GRK++ +P+ + + +
Sbjct: 241 ECVRAMLVAHAKGHVPIVATDSGRKLINEEIKPTFTTMEEWITN 284
>gi|260779336|ref|ZP_05888228.1| Flagellar motor rotation protein MotA [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605500|gb|EEX31795.1| Flagellar motor rotation protein MotA [Vibrio coralliilyticus ATCC
BAA-450]
Length = 285
Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 141/285 (49%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M G +LC+ GG+ GG + QP E +I+ GA G ++ NP +V+K+
Sbjct: 1 MQKFFGAITVLLCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y +++ LL L+ + ++HI+ P S+IF + P V +
Sbjct: 61 VRATISAPREEYEYYMELMALLNNLLETARSRGFKFLDSHIEAPDQSSIFLAYPKVGSDY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M + S ++G + +L GT +GI Y +PL++ + + +
Sbjct: 181 VGGIIITMQAIDGSIALVGYHVAAALVGTFVGIFGCYCCLDPLSNAMAQRVKRNMTAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+AY+ +AI+ GRK + L +P+ + + + +
Sbjct: 241 VRATLVAYVAKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG 285
>gi|71906361|ref|YP_283948.1| chemotaxis motA protein [Dechloromonas aromatica RCB]
gi|71845982|gb|AAZ45478.1| chemotaxis motA protein [Dechloromonas aromatica RCB]
Length = 285
Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats.
Identities = 92/285 (32%), Positives = 155/285 (54%), Gaps = 1/285 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + +G + G+ L P E V + G +G FV AN +KVIK + +
Sbjct: 1 MFLIVGYVIILAAALGTYAI-HGSLLALWVPTEYVAIVGLTIGYFVAANNIKVIKATVAA 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ I + Y D L +L+ ++ ++K E I++P S IF+ P ++ ++
Sbjct: 60 VPGILKGSKFNKAFYIDTLAMLFEILAKVRKEGLMSIEGDIENPDASPIFSKYPNLVHDH 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ DY+RM++ GN + EIE+LMD E++ +E +P H +S + ++PA GIV A
Sbjct: 120 HIMEFVTDYLRMMVGGNLNTVEIESLMDVELETHHHEAAEPGHVVSSIAGAVPAFGIVVA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ MG++ P +LG IG +L GT LGI++SY P+ ++ + +Y
Sbjct: 180 VMGVVNVMGSVGSPPAVLGKMIGGALVGTFLGILISYGFVEPVAKLMEQKANEGSTIYKC 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+A M+G PQVAIE+GRK + RP + +E+
Sbjct: 240 IKMVLLASMSGYAPQVAIEFGRKTIDSGSRPGFVELEEELKARKG 284
>gi|261341476|ref|ZP_05969334.1| chemotaxis MotA protein [Enterobacter cancerogenus ATCC 35316]
gi|288316272|gb|EFC55210.1| chemotaxis MotA protein [Enterobacter cancerogenus ATCC 35316]
Length = 287
Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats.
Identities = 85/286 (29%), Positives = 148/286 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G+FI C++GGF GG QP EI+I+ GAGLG V+ANP V+ +
Sbjct: 1 MQKFLGIFIIFACVVGGFLMSGGRLASFWQPGEIIIILGAGLGAMVLANPKPVLAEMYRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
I + +L LL+ L+ ++ G + HI+ P +S +F P +L+N
Sbjct: 61 FRGIMRKNEYTDEYQRQLLMLLFELLELVQDGGLKVLDEHIEVPESSPLFQKYPLILQNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ TFI D R++ +G +E+E ++++E+ + L+P ++ E++P GI A
Sbjct: 121 AIITFIADNFRLMAMGKINEHELEGILEQELVAMEENLLQPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ Y L +P+ + ++ KQ +
Sbjct: 181 VLGIIITMQSIDGSIAVIGVKVAAALVGTFLGVFFCYCLMDPVANAMEQRTKKQMAVIEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
V+ L+ ++ G +A++ GRK+LPL +P+ + V Q
Sbjct: 241 VRTVLVNHVAGKPTLLAVDAGRKMLPLDSKPTFATLDSWVNQMTGE 286
>gi|114765231|ref|ZP_01444363.1| flagellar motor protein [Pelagibaca bermudensis HTCC2601]
gi|114542366|gb|EAU45394.1| flagellar motor protein [Roseovarius sp. HTCC2601]
Length = 298
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 148/284 (52%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M+ I+GL + + GGF GG I++ PFE +++ GA +G FV+AN + VIK S
Sbjct: 11 MTMILGLALVFGLVFGGFMLSGGKMDIVLHALPFEGMMIGGAAIGAFVIANSVDVIKKSA 70
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++++ Y D+L L+Y L K ++HI+ P +S IF P +
Sbjct: 71 GGIVKVLKGPRWKAKDYGDLLNLMYELTRIYKAKGILALDSHIESPSDSDIFNRYPRIAA 130
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ I D RM+ + Y E++++ +I +E L HAI + + LPAIGIV
Sbjct: 131 DHFAIDLIRDSFRMLSMQFDDKYATEDVINRKIKKHHHESLASVHAIQQVADGLPAIGIV 190
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++ Q P+ILG IG +L GT LG+ L+Y + P++ ++K + Y
Sbjct: 191 AAVLGVIKTMSSIDQPPEILGKMIGGALVGTFLGVFLAYCMVQPISGRLKQIEEEDGAFY 250
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+I++ +A + P + +E GR +P +P V +
Sbjct: 251 MIIRDIFVAMVADHPPSICVEIGRGNIPTRMQPDFYEVEAAQKE 294
>gi|258622498|ref|ZP_05717520.1| chemotaxis LafT protein [Vibrio mimicus VM573]
gi|258624679|ref|ZP_05719614.1| chemotaxis LafT protein [Vibrio mimicus VM603]
gi|262173364|ref|ZP_06041041.1| Flagellar motor rotation protein MotA [Vibrio mimicus MB-451]
gi|258583071|gb|EEW07885.1| chemotaxis LafT protein [Vibrio mimicus VM603]
gi|258585198|gb|EEW09925.1| chemotaxis LafT protein [Vibrio mimicus VM573]
gi|261890722|gb|EEY36709.1| Flagellar motor rotation protein MotA [Vibrio mimicus MB-451]
Length = 285
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 81/285 (28%), Positives = 150/285 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +G I +L + GG+ GG+ + QP EI+I+ GA LG ++ NP +V+K++
Sbjct: 1 MQKFLGAIIILLGVFGGYVWAGGSLSAIWQPAEILIIVGAALGSMIIGNPPQVLKETRRQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L I +++Y +++ L+ +L+ ++ G + HI++P S IFT P V N
Sbjct: 61 LTMIMSSTKDERESYMELMALMQVLLDTIRNGGFKALDKHIENPEESQIFTRYPLVTRNY 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +FI D +R++ +G +E+E L+++EI+ I E L P ++ E+LP GI+ A
Sbjct: 121 RLVSFITDNLRLMAIGQMSPHELEGLLEQEIEAIQTELLLPSRSMQRTAEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ GII M ++ S ++G + +L GT +GI Y +P ++ + + +
Sbjct: 181 VGGIIITMQSIDGSIVMVGYHVAAALVGTFIGIFGCYCCLDPASNAMAQRIRRDMSAFEF 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+A++ +AI+ GRK + L +P+ + + +
Sbjct: 241 VRATLVAHVAKKPALLAIDSGRKHIQLDIKPTFNQMEKWLADQEG 285
>gi|238753169|ref|ZP_04614612.1| Lateral flagellar motor protein A (MotA-like) [Yersinia rohdei ATCC
43380]
gi|238708608|gb|EEQ00883.1| Lateral flagellar motor protein A (MotA-like) [Yersinia rohdei ATCC
43380]
Length = 525
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 84/282 (29%), Positives = 153/282 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + ++C+IGG+ GG QP EI+I+ G+G+G ++ANP V+K+
Sbjct: 238 MQKLFGLVVIMVCVIGGYLMSGGIMSSFWQPGEIIIILGSGVGAMILANPSYVLKEMWHQ 297
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ I + +L LLY L+ + +G + HI+ P NS +F P VL+++
Sbjct: 298 IIAITRKSEYTSEFQQQLLMLLYELLEMVDEGGLKRLDQHIEIPANSPLFQRYPLVLQDH 357
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E ++++E+ + E L P + E++P GI A
Sbjct: 358 HLVTFISDNFRLMAMGKINQHELEGILEQELSAVEEELLVPSRSFHRTAEAMPGFGICAA 417
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ K+ +
Sbjct: 418 VLGIIITMQSIDGSIALIGVKVAAALIGTFLGVFICYCLMDPLANAMEQAMKKKLAFFEC 477
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+ ++ G +A++ GRK+LPL +P+ + + +
Sbjct: 478 VRMVLVNHVAGKPSLLAVDAGRKMLPLDSKPTFATLDSWINK 519
>gi|58038612|ref|YP_190576.1| flagellar motor protein MotA [Gluconobacter oxydans 621H]
gi|58001026|gb|AAW59920.1| Chemotaxis MotA protein [Gluconobacter oxydans 621H]
Length = 288
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 93/276 (33%), Positives = 157/276 (56%), Gaps = 2/276 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIGL + + C+ G F A GG L+ PFE++ + GA +G F+MAN L +K
Sbjct: 1 MFIIIGLVVVLGCVFGSFVASGGAIGPLVSSMPFELLTILGAAVGTFLMANSLGAVKHLP 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ + G+ Y D+L LL+ + E+HI+DP ST+F + P + +
Sbjct: 61 AGIKKAMKGSQYGRADYVDLLSLLFHIAKLASSKGFMALESHIEDPQGSTVFGAFPKIRD 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N + +FICDY+RM + Y+++ +M E+ + E++ HA+ + ++LPA+GIV
Sbjct: 121 NPHVCSFICDYLRMAGMNATDPYQMDEVMGNELKKNMREEMHLPHALQSVSDALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++S+ P +LG I +L GT LGI+L+Y + P+ S++ ++
Sbjct: 181 AAVLGVIKTMASISKPPIVLGEMIAGALVGTFLGILLAYGIVAPIASRLGGVVEEESSYL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+V+ ++A++ G PQV++E GRK +P PS +
Sbjct: 241 DLVRSVIVAHLQGNAPQVSVEIGRKSIPSDLMPSFQ 276
>gi|126734116|ref|ZP_01749863.1| chemotaxis MotA protein [Roseobacter sp. CCS2]
gi|126716982|gb|EBA13846.1| chemotaxis MotA protein [Roseobacter sp. CCS2]
Length = 289
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 79/272 (29%), Positives = 147/272 (54%), Gaps = 3/272 (1%)
Query: 18 FYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
+ GG I+++ PFE++++ GA +G F ++N IK + L +I + Y
Sbjct: 18 YLLAGGKMGIILKALPFEMLMICGAAIGAFAISNDGSAIKHTVKDLGKIVKGPKWKAEDY 77
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
D+L +L+ L+ + K + E+HI+ P STIF P +L++ E ICD +R +
Sbjct: 78 RDLLCMLFELLR-VAKTNPVALESHIEAPDTSTIFGKYPKILDDAEAIALICDTLRSASM 136
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
+++E ++++ I+ L+ K+ HA+ + + LPA+GIV A+LG+IK M ++ Q P
Sbjct: 137 NYDDPHQVEEILEKRIEATLHHKMHSTHALQVVADGLPALGIVAAVLGVIKTMASIDQPP 196
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
++LG IG +L GT LG+ L+Y P ++K+ + + ++++ L+A + P
Sbjct: 197 EVLGKLIGGALVGTFLGVFLAYGFVGPFAVKVKAVVEEDAHFHQLIREVLVANLYAHAPN 256
Query: 256 VAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+ +E GR+ +P RPS + + +
Sbjct: 257 ICVEVGRQNMPGRYRPSFADMEDALKATKQDA 288
>gi|146305233|ref|YP_001185698.1| flagellar motor protein MotA [Pseudomonas mendocina ymp]
gi|145573434|gb|ABP82966.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
Length = 290
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 85/290 (29%), Positives = 159/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G I + C++GG+ G +L QP E+VI+ GAGLG V+ NP +V+ +
Sbjct: 1 MQKLLGALIIVGCVLGGYVMAHGELAMLWQPAEVVIIVGAGLGALVVGNPKEVLVEMCQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F YK G++ +L LLY L+ ++ G + HI++P S +F P + +
Sbjct: 61 IKGVFVYKRRGEEFQRQLLMLLYELLEMVEVGGLKVLDAHIEEPEQSELFAKYPLIRQEK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G ++E+E +++E++ + + L+P ++ +GE++P GI+ A
Sbjct: 121 NLMAFIADNFRLMAMGKISAHELEGFLEQELEAMEHILLQPSRSLHKIGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
I+GII MGN+ S +G + +L GT LGI + Y + PL++ + +
Sbjct: 181 IMGIIITMGNIGGSVAEIGAHVAAALVGTFLGIFMCYCVMEPLSNAMSQRIKTELSALEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V+ L+A++ G +A++ GRK++ +P+ + + V +Y + A+
Sbjct: 241 VRTTLVAHVAGKPTLLAVDAGRKLIEQDVKPAFKQLETWVNRYEDERDAA 290
>gi|148260893|ref|YP_001235020.1| flagellar motor protein MotA [Acidiphilium cryptum JF-5]
gi|146402574|gb|ABQ31101.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
Length = 286
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 94/281 (33%), Positives = 159/281 (56%), Gaps = 2/281 (0%)
Query: 6 GLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
G+ ++C+ G F GG L++ PFE++ + GA +G FV N + IK + +
Sbjct: 3 GVAFLLVCVFGVFIVTGGAIGPLLKSMPFELITIGGAAVGTFVAGNSMHDIKHTLAGFKK 62
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ A + Y D+L LL+ L+ E HI+ P S +F P +L+N E T
Sbjct: 63 VLRGGAFKKADYTDLLCLLFYLVRLAATRGAMALEPHIERPEESPVFKHFPAILKNEEAT 122
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
ICDY+RM+ + ++IE++M E+ L E+L H + M + LPA+GIV A+LG
Sbjct: 123 AIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELHGAHTLQTMADGLPALGIVAAVLG 182
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+IK M ++SQ P +LG IG +LTGT LG++L+Y + PL+ +++ + R + +++
Sbjct: 183 VIKTMAHISQPPAVLGEMIGEALTGTFLGVLLAYGVVGPLSVRLRGVVEEDSRYFEVIRA 242
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
L+A+++G PQV++E GRK++P P+ + + + V
Sbjct: 243 VLVAHLHGNAPQVSVEVGRKMVPNLFMPTFQELEESVESLK 283
>gi|262273511|ref|ZP_06051325.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
gi|262222489|gb|EEY73800.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
Length = 282
Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats.
Identities = 85/282 (30%), Positives = 155/282 (54%), Gaps = 1/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + ++GG+ G L QP E VI+ GA LG V+ANP V+K+
Sbjct: 1 MQVILGFVVVFATVMGGYVMATGKIAALWQPPEFVIILGAALGAMVIANPPYVLKNILTR 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + K G D Y VL+L+Y L+ ++K + ++HI++P +S IF+ P V+++
Sbjct: 61 LKMLM-GKPYGDDFYKSVLQLMYELLEVVRKDGMKKLDDHIENPESSDIFSRYPNVVKSP 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D +R + +G +++E ++ E++ + + ++P A++ GE++P GIV A
Sbjct: 120 ILLPFITDNLRTLAMGKMTHHDLEAALELEMEALEADLMRPSKALTKTGEAMPGFGIVAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M N+ ++G + +L GT G++++Y + +PL+S I K+ +
Sbjct: 180 VLGIVVTMQNIGGPLTLIGVKVAAALVGTFFGVLMAYGVFDPLSSSITGLVKKEMLALRM 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V L+A G +A++ GR++L +PS + Q +++
Sbjct: 240 VATILVAQAQGKPTILALDSGRRLLYSEYKPSFSEMEQWMVR 281
>gi|329850379|ref|ZP_08265224.1| chemotaxis protein motA [Asticcacaulis biprosthecum C19]
gi|328840694|gb|EGF90265.1| chemotaxis protein motA [Asticcacaulis biprosthecum C19]
Length = 290
Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 165/289 (57%), Gaps = 2/289 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G + GGN +I+ P E++ + G+ + ++ N L +K G
Sbjct: 1 MFQIIGIVLLFGMVFGSYMLAGGNFAPIIEAAPHELMAIGGSAVAASLIGNSLTTLKGMG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++FG Y D+L LL++L +K E+HI+ P++S+IF P +++
Sbjct: 61 GGMGKVFGGPKWKASDYRDLLSLLFLLTKTMKSKGVIALESHIEKPHDSSIFKRFPKIVK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E L P HA+ +M ++LPA+GIV
Sbjct: 121 DHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEALHPAHALQNMADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P++LG IG +L GT +G+ L+Y L P +++ ++ Y
Sbjct: 181 AAVLGVIKTMGSITEPPEVLGAMIGGALVGTFMGVFLAYGLVGPFATRMSGVIEEESAFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
I++ L+A+++G Q+++E GR +P +PS + + +
Sbjct: 241 KIIQSVLVAHLHGNAAQISVEIGRGSIPTPSQPSFLEMEEALNNIPAEA 289
>gi|157959886|ref|YP_001499920.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157844886|gb|ABV85385.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 285
Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats.
Identities = 84/282 (29%), Positives = 151/282 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS +IGL I +L + GG+ GG L QP EI+I+ GAGLG V+A P V+
Sbjct: 1 MSKLIGLVIILLSVFGGYMWAGGVLLALWQPAEILIIFGAGLGALVIATPKPVLIVMVEQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L EI + + Y + L+ +LM ++ ++H++ P S++F P +LE+
Sbjct: 61 LKEILKVEKEDPELYPQLFGLMSMLMTQIQMQGLKVIDDHVEKPRESSLFLMYPAILEHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G +++E++++EEI I + ++P HAI+ + E++P GI+ A
Sbjct: 121 NVLNFLIDNLRLQSMGKISPHDLEHILEEEIHRIEEDSMRPSHAIAKIAEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M ++ ++G + +L GT +GI Y L +P+ ++ ++
Sbjct: 181 VMGIIITMSSIDGPITMIGVKVSAALVGTFIGIFACYCLFDPIAKALEHLVERKSAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V L A+ G P +AI+ GRK + + RPS + + + +
Sbjct: 241 VAAMLAAFAKGKPPMIAIDAGRKQIQIENRPSFIELERWLAE 282
>gi|218886186|ref|YP_002435507.1| flagellar motor protein MotA [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218757140|gb|ACL08039.1| flagellar motor protein MotA [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 281
Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats.
Identities = 85/282 (30%), Positives = 155/282 (54%), Gaps = 1/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIGL + I+ G+ G ++L QP E++I+ GA +G F++++ + +
Sbjct: 1 MFAIIGLVVVFGSILTGYLMSHGVLHVLWQPAELIIILGAAIGAFIVSSTKYSLGLVLKN 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + G + + Y DVL LL L + + E I+ P S+IF P + ++
Sbjct: 61 LKLVLGDPGMSKAKYLDVLGLLNSLFVKMHREGVISIEQDIEKPEGSSIFNKYPAIAKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI D +R+ + EI++LM+ ++ + E+ H+I M ESLP +GIV A
Sbjct: 121 HTVHFIGDTLRVYLTTG-DPNEIDSLMEVDMKSMHEEESIAPHSIGRMAESLPGMGIVAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG +S+ P++LG IG +L GT +GI+ Y + P+ ++I+ + H + +
Sbjct: 180 VLGVVLTMGKISEPPEVLGHHIGAALIGTFIGILFCYGVFGPMGAKIEQANHEHHMYFAV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+K+A+ A + G+ P +A+EYGR+ +P + RP+ + +++
Sbjct: 240 IKEAVAAAIRGSTPIIAVEYGRRAIPHTFRPTFAEMEEKLKS 281
>gi|303248926|ref|ZP_07335173.1| chemotaxis protein MotA [Desulfovibrio fructosovorans JJ]
gi|302489649|gb|EFL49585.1| chemotaxis protein MotA [Desulfovibrio fructosovorans JJ]
Length = 288
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 91/283 (32%), Positives = 161/283 (56%), Gaps = 2/283 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ I I CI+ GF GN +L+ P E++++ G LG V++ P V+ +
Sbjct: 1 MFAIIGILIVIGCILAGFILEKGNFDLLLSAAPPEMLMIGGGALGQLVLSAPKDVLGATF 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L IFG + Y ++L L L +++ E ++ P S IF++ +
Sbjct: 61 KGALSIFGGMTTSKAYYLELLTTLSGLYMKIRREGLVAIEKDVERPAESPIFSNFAKNKK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N+E+ TFICD MR+ N ++E E++MD +I+ ++E+L P HAIS ++LP +GIV
Sbjct: 121 NHEVLTFICDTMRIFSTVNIEAHEFESIMDADIEATVHEELVPSHAISKTADALPGLGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LG++ MG +++ ++LG +IG +L GT LG++++Y P+ + I+ + +
Sbjct: 181 ACVLGVVLTMGKINEPAEVLGHSIGAALVGTFLGVLMAYGFVAPIATNIEHRAKETEAIL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+ K +L A++ G P VA+E GR+ +P+ +RP+ E + + +
Sbjct: 241 LTAKASLTAFVGGNPPPVALEAGRRAIPIHKRPTFEELEEAIK 283
>gi|308050007|ref|YP_003913573.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307632197|gb|ADN76499.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 285
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 84/285 (29%), Positives = 148/285 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M GL I + GGF G L QP E+VIV GA +G ++++NP+ V++D+
Sbjct: 1 MLKFFGLLTVIASVFGGFLLAKGQLAALWQPAEVVIVMGAAIGSYIISNPMPVLRDTLAQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L I + + Y + L+ LM ++ + HI+ P+ S+IF + P VL
Sbjct: 61 LRGIVTSEKEDPELYPQLFGLMNTLMNQIRMNGLKVLDEHIEKPFESSIFLTYPAVLRQP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L +F+ D +R+ +G ++E ++LM+EEI + ++++P HA+ GE+LP GI+ A
Sbjct: 121 MLLSFLVDNLRLQSMGKLTAHEFQHLMEEEIHRLQEDRMRPSHAMHRTGEALPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII MG + ++G + +L GT +G+ Y L P S + ++
Sbjct: 181 VMGIIITMGAIDGPLTMIGVHVAAALVGTFMGVFACYCLFEPAASAMAHLIDRRIAQLHC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L+A G P +A++ GR+++ RPS + + +++
Sbjct: 241 VKAILVAQQAGKQPLLALDAGRRLIQEENRPSFLQLERYLVEEQR 285
>gi|16125003|ref|NP_419567.1| flagellar motor protein MotA [Caulobacter crescentus CB15]
gi|221233724|ref|YP_002516160.1| flagellar motor protein MotA [Caulobacter crescentus NA1000]
gi|13421983|gb|AAK22735.1| chemotaxis MotA protein [Caulobacter crescentus CB15]
gi|220962896|gb|ACL94252.1| chemotaxis motA protein [Caulobacter crescentus NA1000]
Length = 288
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 87/284 (30%), Positives = 161/284 (56%), Gaps = 2/284 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ + + G + GG ++I P E++ + GAG+ F++ N + VIK +
Sbjct: 1 MFQIIGIVLLFAMVFGSYIMAGGKMDVIIHAAPHELMAIGGAGVAAFLIGNSVTVIKATL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
IF Y D+L LL++L +K E HI+ P+ STIF+ P +
Sbjct: 61 GGFGTIFKGPKWKAQDYRDLLSLLFLLTKTMKSKGVIALEAHIEKPHESTIFSRYPKIAH 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ FICD +RM+ + +++E+ M+++++ +E HA++ + + LPA+GIV
Sbjct: 121 DHFAVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEAHGAAHALTQLSDGLPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK MG++++ P +LGT IG +L GT +G+ ++Y L P+ +++ + H Y
Sbjct: 181 AAVLGVIKTMGSITEPPAVLGTMIGGALVGTFMGVFMAYGLVGPMATRLGGVLDEDHNFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
I++ L+A+++G Q+++E GR +P + +PS + + + Q
Sbjct: 241 KIIQAVLVAHLHGNAAQISVEIGRGNVPSAYQPSFAELEEALSQ 284
>gi|149184215|ref|ZP_01862533.1| flagellar motor protein MotA [Erythrobacter sp. SD-21]
gi|148831535|gb|EDL49968.1| flagellar motor protein MotA [Erythrobacter sp. SD-21]
Length = 287
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 93/285 (32%), Positives = 161/285 (56%), Gaps = 4/285 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI--QPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG+F+ ++ + GGF GG+ ++ PFE++I+ GA +G V N L +K G
Sbjct: 1 MYAVIGIFVLLVMVFGGFVLSGGSLGPVLVAMPFEMLIIGGAAIGALVAGNSLDGLKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ +IF + + D + L LM LK E+H+DDP NST+F+ P +L+
Sbjct: 61 GAMGKIFKGPQHTKQDHIDAIALTTQLMRMLKNEGPVALESHLDDPANSTVFSEYPNLLK 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
N L ICD + +I+V G ++ +E +MD + +E +P H + + ++LPA+G
Sbjct: 121 NKPLVALICDTLTLIVVSSGTLETHAVEEVMDNAMKTHFHEMHEPQHNLQTLSDALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P+ILG IG +L GT LG++L+Y + PL ++K + +
Sbjct: 181 IVAAVLGVVKTMGSIDQPPEILGKMIGAALVGTFLGVLLAYGIVGPLAGRLKQVLEQDEQ 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
++ VK+ +IA ++G + +E R L + RP + + +
Sbjct: 241 IFHAVKQVIIASLHGHPQPLVVESARSGLGHNVRPGLNELLDALR 285
>gi|157373191|ref|YP_001471791.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
gi|157315565|gb|ABV34663.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 285
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 79/273 (28%), Positives = 144/273 (52%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+ GG+ GGN L QP EI+I+ GAG+G ++ANP V+ D L E+ +
Sbjct: 13 SVFGGYVWAGGNLSSLWQPAEILIIFGAGVGSLIIANPKAVLADMYAQLRELLSVEKEDP 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ Y + L+ +LM ++ + H++ P S++F PTVLE+ + F+ D +R+
Sbjct: 73 ELYPQLFGLMGMLMSQIQSQGLRVLDEHVEKPRESSLFLMYPTVLEHPNVLQFLIDNLRL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+G +++E++++EEI I ++L+P HA+ + E++P GI+ A++GII M N+
Sbjct: 133 QSIGKISPHDLEHILEEEIYRIEEDRLRPAHALGRIAEAMPGFGILAAVMGIIITMSNID 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
++G + +L GT +GI Y L P + ++ ++ V L A+ G
Sbjct: 193 GPITMIGVKVAAALVGTFIGIFACYCLFEPTSKALEHLVERKSAQLRCVAAMLTAFAKGK 252
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
P +AI+ GRK + RP+ + + +++
Sbjct: 253 PPMIAIDAGRKQIQSENRPTFIELERWMVEQKS 285
>gi|283851001|ref|ZP_06368286.1| chemotaxis protein [Desulfovibrio sp. FW1012B]
gi|283573647|gb|EFC21622.1| chemotaxis protein [Desulfovibrio sp. FW1012B]
Length = 288
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 88/287 (30%), Positives = 160/287 (55%), Gaps = 2/287 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ I + CI+ GF GN +++ P E++++ G LG V+++P V+ +
Sbjct: 1 MFAILGVVIVLGCILAGFIMEKGNFDLILSAAPPELLMIGGGALGALVLSSPKDVLGATF 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L IFG + Y ++L L L +++ E ++ P S IF++ +
Sbjct: 61 KGALSIFGGMITSKAYYLELLTTLSGLYMKIRREGLVAIEKDVERPAESPIFSNFAKNKK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N+E+ TFICD MR+ N ++E E +MD +I+ ++E L P H+I+ + ++LP +GIV
Sbjct: 121 NHEVLTFICDTMRIFSTVNIEAHEFETIMDADIEATVHEALIPAHSIAKVADALPGLGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LG++ MG +++ ++LG +IG +L GT LG++ +Y P+ + I+ + +
Sbjct: 181 ACVLGVVLTMGKINEPAEVLGHSIGAALVGTFLGVLGAYGFVAPVATNIEYRAKETEAIL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+ K +L A++ G P VA+E GR+ +P+ +RPS E + Q +
Sbjct: 241 LTAKASLTAFVGGNPPPVALEAGRRAIPIHKRPSFEELEQAIKASKG 287
>gi|90422601|ref|YP_530971.1| flagellar motor protein MotA [Rhodopseudomonas palustris BisB18]
gi|90104615|gb|ABD86652.1| chemotaxis protein [Rhodopseudomonas palustris BisB18]
Length = 281
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 138/270 (51%), Positives = 191/270 (70%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
MGG+ ++ QP+E VI+ G LG +++ANP KV+ D+GV++++ Q Y D+L
Sbjct: 1 MGGHIGVIWQPWEFVIIGGMALGTYIVANPWKVVVDTGVAVVQALTMAVPQQRHYLDLLG 60
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
LL+ LM ++ RNE E HIDDP +S IF + PTVL N + +FICDY R+II+G+AR
Sbjct: 61 LLHSLMREVRNKGRNEVEGHIDDPASSEIFGNFPTVLANEAMVSFICDYFRLIIMGSARP 120
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
+EIE LMDEEI+ I+ KLKPY ++ + E LPA+GIV A+LG+IKAMG L QSPK+LG
Sbjct: 121 HEIEALMDEEIETIVRSKLKPYSSMMMVAEGLPALGIVAAVLGVIKAMGALDQSPKLLGG 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
IG +L GT GI LSY L PL +++KS R +Q R+YIIVK+ L+A+MNGA+PQ+AIE+
Sbjct: 181 FIGSALVGTFAGIFLSYGLVAPLAAKVKSVRERQCRMYIIVKQTLLAFMNGALPQIAIEH 240
Query: 261 GRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
GRK++ ERPSI++V E + K A+
Sbjct: 241 GRKMIGPGERPSIDVVENETISGGAAKAAT 270
>gi|213584596|ref|ZP_03366422.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 247
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 135/240 (56%)
Query: 49 NPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNST 108
N K IK + ++ +F + Y D+L LLY LM ++ E I++P S
Sbjct: 1 NNGKAIKGTMKAIPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESE 60
Query: 109 IFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM 168
IF S P +L + + FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +
Sbjct: 61 IFASYPRILADAVMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMV 120
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
G+SLPA GIV A++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++
Sbjct: 121 GDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLR 180
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+ ++ VK L++ +NG P +A+E+GRK L SERPS + + V + +
Sbjct: 181 QKSAETTKMMQCVKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQ 240
>gi|78485776|ref|YP_391701.1| chemotaxis protein [Thiomicrospira crunogena XCL-2]
gi|78364062|gb|ABB42027.1| Flagellar motor protein MotA [Thiomicrospira crunogena XCL-2]
Length = 273
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/264 (34%), Positives = 157/264 (59%), Gaps = 1/264 (0%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
+GG+ G+ ILIQP E++I+ G+ LG F++ANP V+K S L + ++
Sbjct: 5 LGGY-LPHGSIGILIQPLEVLIICGSALGAFIIANPGWVVKKSFSGALGLAKPDPYNKEA 63
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
Y ++L L++ + ++ E +++P++S +F + P V+ ++ FICDY+R++I
Sbjct: 64 YVELLGLMFRIFNKARREGLMAIEADVEEPHSSELFNASPKVVSDHHAVDFICDYLRLMI 123
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
G + Y++E+LM E+DI +E P A+ + E+LP GIV A+LGII MG L
Sbjct: 124 SGASNPYQLEDLMILEMDIHHHEAAAPAEAVGKVAEALPGFGIVAAVLGIIVTMGYLDAG 183
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
P + + V+L GT LGI+++Y + P++S + + + + +K L+A +NG P
Sbjct: 184 PLEIAHHMSVALVGTFLGILVAYGVVGPISSDMANRAHNEGAYFGTIKTCLMANLNGYAP 243
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQ 278
Q+A+E+GRK +P SERPS + + +
Sbjct: 244 QIAVEFGRKSIPASERPSFQELEE 267
>gi|34498444|ref|NP_902659.1| flagellar motor protein MotA [Chromobacterium violaceum ATCC 12472]
gi|34104299|gb|AAQ60658.1| chemotaxis lafT protein [Chromobacterium violaceum ATCC 12472]
Length = 288
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 82/287 (28%), Positives = 154/287 (53%), Gaps = 3/287 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + G+ I ++C+ GGF GG I+ QP E++I+ GA LG V+ NP V+K+ G
Sbjct: 1 MQQLFGILIVLVCVFGGFMLHGGVLSIIWQPTELLIICGAALGAVVLGNPPHVLKEMGGQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K G + L L+Y L+ + + H++ P S +F P VLEN
Sbjct: 61 IKRVVVRKKQGAEFQRQQLLLMYELLITASR-GLKALDQHVEAPRQSPLFNRYPMVLENR 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D R++ +G ++E+E ++D+E+D I + ++P ++ + E++P GI+ A
Sbjct: 120 KLLAFIVDNFRLMAMGKINAHELEGVLDQELDAIHEQLMQPSKSLHKIAEAMPGFGILAA 179
Query: 181 ILGIIKAMGNLSQSPK--ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LGI+ AM ++Q + ++ ++ GT +GI Y + +PL++ + ++ +
Sbjct: 180 VLGIVMAMNTVAQGASAGEIAASVAAAMVGTFIGIFFCYGVLDPLSNVMHQLVKEELSNF 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK L +++G P +AI+ GR+++ L+ +PS + +
Sbjct: 240 ESVKVVLTTHVSGKPPLLAIDAGRRLVQLNTKPSFSQLESWINAMEG 286
>gi|330501120|ref|YP_004377989.1| flagellar motor protein MotA [Pseudomonas mendocina NK-01]
gi|328915406|gb|AEB56237.1| flagellar motor protein MotA [Pseudomonas mendocina NK-01]
Length = 290
Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats.
Identities = 83/290 (28%), Positives = 157/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G I + C++GG+ G +L QP E++I+ GAG G V+ANP V+ +
Sbjct: 1 MQKLLGALIIVACVLGGYVMAHGELAMLWQPAEVIIIVGAGFGALVVANPKDVLLEMLHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F YK G++ +L +LY L+ + G + HI++P S +F P + +
Sbjct: 61 IKGVFVYKKRGEEFQRQLLMMLYELLEMVDVGGLKVLDAHIEEPEQSDLFAKYPLIRQEK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G ++E+E +++E++ + + ++P ++ +GE++P GI+ A
Sbjct: 121 NLMAFIADNFRLMAMGKISAHELEGFLEQELEAMEHVLMQPSRSLHKIGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
ILGI+ MGN+ S +G + +L GT LGI + Y + PL+S + +
Sbjct: 181 ILGIVITMGNIGGSVAEIGAHVAAALVGTFLGIFMCYCVMEPLSSAMGQRIKTEMSALEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V+ L+A++ G +A++ GRK++ +P+ + + V +Y + A+
Sbjct: 241 VRTTLVAHVAGKPTLLAVDAGRKLIEQDVKPAFKQLEIWVNRYEDERDAA 290
>gi|332187926|ref|ZP_08389659.1| hypothetical protein SUS17_3016 [Sphingomonas sp. S17]
gi|332012087|gb|EGI54159.1| hypothetical protein SUS17_3016 [Sphingomonas sp. S17]
Length = 287
Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats.
Identities = 88/280 (31%), Positives = 149/280 (53%), Gaps = 4/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IGL I + + GGF GG + P E++I+ GA +G V+ N K +K G
Sbjct: 1 MFPAIGLVILLGMVFGGFAITGGQLGPVFHAIPHEMLIIGGAAVGALVIGNSGKELKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++ +IF + Y DV+ L+ LM L+ E H++DP +S++F P ++
Sbjct: 61 GAMGKIFKGPKYKKQDYLDVIFLVSKLMKMLRTEGPIALEPHVEDPKSSSVFAEYPRLVA 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
++ L I D +R+++V G + +E +MD I +E P + + +SLPA+G
Sbjct: 121 DHTLVNLIADTLRLVVVSSGTLDVHAVEEVMDNAIKTHHHEVEGPQGTLQSLADSLPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LGI+K MG++ + P +LG IG +L GT +G++L+Y + NP ++K
Sbjct: 181 IVAAVLGIVKTMGSIDKPPSVLGGMIGSALVGTFMGVLLAYGIVNPFAGRLKQVIDADAA 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+Y +VK+ +IA ++G + IE R + ++P V
Sbjct: 241 IYHVVKQIIIASLHGHPQPLVIEAARSGIAHKDQPGFAEV 280
>gi|327478800|gb|AEA82110.1| flagellar motor protein MotA [Pseudomonas stutzeri DSM 4166]
Length = 290
Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 159/290 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G FI I C++GG+ G+ +L QP E+VI+ GA LG V+ NP +V+ +
Sbjct: 1 MQKVLGAFIIIGCVLGGYAMANGDMRVLWQPAEVVIILGAALGSLVVGNPKEVLIEMLHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F Y+ G++ +L LLY L+ + G ++HI++P S +F P +L+
Sbjct: 61 IKGVFAYQRRGEEFQRQLLMLLYELLEMVDVGGLKVLDSHIEEPEQSDLFVRYPLILQEK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G ++E+E +++E++ + + ++P ++ +GE++P GI+ A
Sbjct: 121 NLMAFIADNFRLMAMGKITAHELEGFLEQELEAMEHALMQPSRSLFKIGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
I+GII MG++ S +G + +L GT LGI Y L PL++ + +
Sbjct: 181 IMGIIITMGSIGGSVAEIGAHVAAALVGTFLGIFFCYCLMEPLSNAMGQRVKTELSALEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V+ L+A++ G +A++ GRK++ +P+ + V QY + A+
Sbjct: 241 VRTTLVAHLAGKPTLLAVDAGRKLIEQDVKPAFRQLEVWVNQYEEERDAA 290
>gi|114571063|ref|YP_757743.1| flagellar motor protein MotA [Maricaulis maris MCS10]
gi|114341525|gb|ABI66805.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
Length = 290
Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 152/270 (56%), Gaps = 2/270 (0%)
Query: 20 AMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
GG+ ++++ PFE++++ GA +G F++ N K + + L ++F Y D
Sbjct: 20 LAGGHFDVIMKALPFEMMMIGGAAVGAFLIGNKPKTVFKTLGDLSKVFTGPKWKGQDYTD 79
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+L LL++L +K E+HI++P STIFT P +++++ FICD +RM+ +
Sbjct: 80 LLSLLFLLTKTMKTKGVIALESHIENPTESTIFTRFPRIMKDHFAVDFICDTLRMMTMNL 139
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+++E+ M+++++ +E P HA+ M + LPA+GIV A+LG+IK MG + P +
Sbjct: 140 EDPHQVEDAMEKQLEKHHHEAADPAHAMQTMADGLPALGIVAAVLGVIKTMGAIESPPAV 199
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
LG IG +L GT LG+ ++Y P + +++ ++H Y I++ L+A+++G Q++
Sbjct: 200 LGGYIGGALVGTFLGVFIAYGFVGPFAAYMQAVYDEEHSFYKIIQDVLVAHLHGNAAQIS 259
Query: 258 IEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+E GR +P +PS + +
Sbjct: 260 VEIGRGGVPSKMQPSFSELETALDAIPAEA 289
>gi|116624959|ref|YP_827115.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
gi|116228121|gb|ABJ86830.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
Length = 291
Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats.
Identities = 83/290 (28%), Positives = 146/290 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IIG+ I + I G+ G +L+QP E+VI+ GA +G V+ANPL V+
Sbjct: 1 MLSIIGIVIVLGAIAAGYMMEHGKFLVLLQPAELVIIFGAAIGTVVIANPLPVLTKIAKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ +F + Y + LK+LY L +K + E +D+P + P L +
Sbjct: 61 LVAVFAGSPFTKARYLETLKMLYELFSLSRKAGTAKLEEEVDNPSKGQVLNKYPKFLAQH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CD +RM + G EI+++M+ ++D+ E +P A+S M ++LP +GIV A
Sbjct: 121 HALHFLCDTLRMAVTGGVDPLEIDSMMEADLDVHHKESAEPIAALSTMADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG L + +G + +L GT LGI+L Y + PL + + Y++
Sbjct: 181 VLGVVLTMGALGGPKEAIGEKVAAALVGTFLGILLCYGIFGPLAVAMGKNAEADSQFYLV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
++ A + ++ P +A+E R+ +P RP+ + + +
Sbjct: 241 LRMAALGFVKELSPMLAVELARRSIPAVVRPTFQEMEAACRGGGSVASKA 290
>gi|239908608|ref|YP_002955350.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239798475|dbj|BAH77464.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 288
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 159/287 (55%), Gaps = 2/287 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G I + CI+ GF GN +++ P E++++AG LG FV+++P V+ +
Sbjct: 1 MFVILGTIIVLGCILSGFILEKGNFDLILSAAPPELLMIAGGALGAFVISSPKDVLSHTI 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
S+ +FG + Y +L L L +++ E ++ P S IF+ +
Sbjct: 61 KSVFTVFGGMVTSKAYYTTLLVTLSGLYMKIRREGLVAIEKDVERPAESPIFSDFAKNKK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N+E+ FICD MR+ N ++E +N+MD +I+ +E L P H+I + + LPA+GIV
Sbjct: 121 NHEVLLFICDTMRIFSTVNIEAHEFDNIMDADIEATAHELLIPSHSIGKIADGLPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LG++ MG L++ ++LG +IG +L GT +G++L+Y P+ + ++ + +
Sbjct: 181 ACVLGVVITMGKLNEPAEVLGHSIGAALVGTFMGVLLAYGFVAPIATNLEFRAKEIEHIL 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++ K +L +++ G P VA+E GR+ +P+ RP+ E + + +
Sbjct: 241 LVAKASLGSFVGGNPPPVALEAGRRAIPIHYRPTFEQLEEAIKASKG 287
>gi|148554181|ref|YP_001261763.1| flagellar motor protein MotA [Sphingomonas wittichii RW1]
gi|148499371|gb|ABQ67625.1| Flagellar motor component-like protein [Sphingomonas wittichii RW1]
Length = 287
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 90/280 (32%), Positives = 152/280 (54%), Gaps = 4/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IGL I + GGF GG+ ++ P E++I+ GA LG V N +K +K G
Sbjct: 1 MFAGIGLVILFAMVFGGFAFTGGDLEPVLHAIPHEMLIIGGAALGAVVAGNSMKELKALG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++F G+ Y DV+ L+ LM L+ E HI+DP ST+F P +L+
Sbjct: 61 GGFAKVFKGPKYGKKDYLDVIFLVSTLMKKLRTEGPVALEPHIEDPKGSTLFAEYPKLLK 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
++ L I D +R++++ G +E++MD + ++++KP A+ ++ +SLPA+G
Sbjct: 121 DDTLIHMITDTLRLVVISSGTLDPMAVEDVMDNALKTHHHDEIKPADAMQNLADSLPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ + P ILG IG +L GT LG++L+Y + P + +
Sbjct: 181 IVAAVLGVVKTMGSIDKPPAILGAMIGSALVGTFLGVLLAYGIVGPFAGRCRQVIEADGA 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+Y +VK+ +IA ++G + IE R + +P+ V
Sbjct: 241 IYGVVKQIIIASLHGHPLPLVIEAARSGITHVNQPAFADV 280
>gi|167574626|ref|ZP_02367500.1| flagellar motor protein MotA [Burkholderia oklahomensis C6786]
Length = 283
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 83/280 (29%), Positives = 152/280 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG+F+ + + GGF GG + QP EI+I+ GA G VM NP V+ + GV
Sbjct: 1 MQLVIGIFLVLGGVFGGFILHGGALSSIWQPTEILIILGAASGALVMGNPRSVLIEMGVQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ K G + ++L +LY L+ ++ G + H+++P S +F P +L
Sbjct: 61 IKKVIARKGNGTEFQRELLLMLYELLEMVRDGGLKALDQHVEEPRESELFQKYPMILAQP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D R++ +G +E+E+++D+E++ I E ++P ++S + E++P GI+ A
Sbjct: 121 QLIAFIVDNFRLMAMGRITQHELESMLDQELEAIESELMRPSRSLSKVAEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M N+ + +G + ++ GT +GI+L Y + PL S + + +
Sbjct: 181 VLGIVTTMANIGGNVSDIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVNSEISAFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
VK L A + G +A++ GRK++ L +PS + +
Sbjct: 241 VKVVLCAQVAGKPTLLAVDAGRKLIQLDVKPSFSKLESWI 280
>gi|149908743|ref|ZP_01897404.1| flagellar motor protein [Moritella sp. PE36]
gi|149808285|gb|EDM68224.1| flagellar motor protein [Moritella sp. PE36]
Length = 285
Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats.
Identities = 81/282 (28%), Positives = 151/282 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +GL + +LC+ GGF GG ++ QP E++I+ GAG+G ++ANP V+ +
Sbjct: 1 MQKFVGLGVILLCVFGGFILAGGKLAVMWQPAELMIILGAGIGSMLIANPKYVLVELKNQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
F +A + ++L +++ LM ++ + HI++ S++F + +
Sbjct: 61 FFASFKKEADRGEVMKELLLVMHTLMEMVRNKGLKSIDEHIENWETSSLFLQYEHIHSDR 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D RM+ +G S+E+E++++ EI+ + + LKP A+ GE++P GI+ A
Sbjct: 121 LLMHFITDNFRMMSMGKMSSHELEHVLESEIEALEDDLLKPSEALHTTGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M +L ++G +G +L GT LGI Y L P+ + + Q L
Sbjct: 181 VMGIIITMSSLDGPLMMIGLHVGAALVGTFLGIFFCYCLFEPIGESLAARVHNQLLLLTC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK ++A+++G P ++++ GRK++ +P+ + Q +
Sbjct: 241 VKTMMVAHISGKSPVLSVDSGRKLIDREIKPTFVEMEQWLNA 282
>gi|126442576|ref|YP_001061207.1| flagellar motor protein MotA [Burkholderia pseudomallei 668]
gi|134280848|ref|ZP_01767558.1| chemotaxis protein MotA [Burkholderia pseudomallei 305]
gi|254182926|ref|ZP_04889519.1| chemotaxis LafT protein [Burkholderia pseudomallei 1655]
gi|254299721|ref|ZP_04967170.1| chemotaxis LafT protein [Burkholderia pseudomallei 406e]
gi|125657183|gb|ABN48671.1| chemotaxis MotA protein [Burkholderia pseudomallei]
gi|126222067|gb|ABN85572.1| chemotaxis protein MotA [Burkholderia pseudomallei 668]
gi|134247870|gb|EBA47954.1| chemotaxis protein MotA [Burkholderia pseudomallei 305]
gi|157809337|gb|EDO86507.1| chemotaxis LafT protein [Burkholderia pseudomallei 406e]
gi|184213460|gb|EDU10503.1| chemotaxis LafT protein [Burkholderia pseudomallei 1655]
Length = 283
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 84/282 (29%), Positives = 148/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG+ + C+ GGF GG + QP EI+I++GA G VM NP V+ + G
Sbjct: 1 MQLAIGILLVFGCVFGGFVLHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K+ G + ++L +LY L+ ++ G + H+++P S +F P +L
Sbjct: 61 IKHVIARKSNGVEFQRELLLMLYELLETVRDGGLKALDQHVEEPRESDLFRKYPMILAQP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A
Sbjct: 121 RLIAFIVDNFRLMAMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M N+ S +G + ++ GT +GI+L Y + PL S +
Sbjct: 181 VLGIVTTMANIGGSVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK L A + G +A++ GRK++ L +PS + +++
Sbjct: 241 VKVVLCAQVAGKPTLLAVDAGRKLIQLDVKPSFSKLESWIME 282
>gi|310816841|ref|YP_003964805.1| flagellar motor protein MotA [Ketogulonicigenium vulgare Y25]
gi|308755576|gb|ADO43505.1| flagellar motor protein MotA [Ketogulonicigenium vulgare Y25]
Length = 288
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 82/275 (29%), Positives = 152/275 (55%), Gaps = 6/275 (2%)
Query: 18 FYAMGGNPYILI--QPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
+ GG I+I PFE++I+ GA +G F++AN + ++K + +L +F + Y
Sbjct: 18 YLLSGGKMGIVIAALPFEMMIIFGAAVGAFLLANSIGIVKATLKALPLVFRGARWKANDY 77
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
D+L LL+ L+ + + E HI+ P S+IF P +L ++E + ICD +R +
Sbjct: 78 RDLLVLLFELIRLAR-ANPVALEEHIEQPRASSIFAQYPRILADHEAVSLICDTLRAAGM 136
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
++E ++++ ++ + L+P HA+ M + LPA+GIV A+LG+IK M ++ + P
Sbjct: 137 NYDDPMQVEEVLEKRLEASRHHALQPVHALQTMADGLPALGIVAAVLGVIKTMSSIDEPP 196
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+LG IG +L GT LG+ L+Y P+ ++++S + Y ++++ L+A + P
Sbjct: 197 AVLGKMIGGALVGTFLGVFLAYGFVGPMAARLQSICDEDAHFYQLIREVLVANLYQHAPP 256
Query: 256 VAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+ IE GR+ P + RP + + +K+A+
Sbjct: 257 LCIEVGRQSTPENLRPGFADLE---MVLKASKEAA 288
>gi|83717992|ref|YP_438355.1| flagellar motor protein MotA [Burkholderia thailandensis E264]
gi|167614801|ref|ZP_02383436.1| flagellar motor protein MotA [Burkholderia thailandensis Bt4]
gi|83651817|gb|ABC35881.1| chemotaxis MotA protein [Burkholderia thailandensis E264]
Length = 283
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 84/282 (29%), Positives = 148/282 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IG+ + C+ GGF GG + QP EI+I++GA G VM NP V+ + G
Sbjct: 1 MQLAIGILLVFGCVFGGFVLHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K+ G + ++L +LY L+ ++ G + H+++P S +F P +L
Sbjct: 61 IKHVIARKSNGVEFQRELLLMLYELLETVRDGGLKALDQHVEEPKESDLFRKYPMILAQP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI D R++ +G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A
Sbjct: 121 RLIAFIVDNFRLMAMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ M N+ S +G + ++ GT +GI+L Y + PL S +
Sbjct: 181 VLGIVTTMANIGGSVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
VK L A + G +A++ GRK++ L +PS + +++
Sbjct: 241 VKVVLCAQVAGKPTLLAVDAGRKLIQLDVKPSFSKLESWIME 282
>gi|116620374|ref|YP_822530.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
gi|116223536|gb|ABJ82245.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
Length = 305
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 84/285 (29%), Positives = 159/285 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG+ + +IGGF GN Y+L+QP E++IV GA G ++ANP VI
Sbjct: 1 MHALIGIAVVFAAVIGGFLLERGNLYVLLQPAELLIVGGAAAGIVMVANPPAVIFRMWRG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F ++ L++LY + +++ E E+ ++DP S IF + P L +
Sbjct: 61 TLAAFRPPPHNPQSFLRYLRMLYEIFCYIQRAGVVEFESDVEDPKGSRIFANHPDFLNDP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+CD +RM++VG + E++ LM+ +I+ + +P +++ + ++LP +GIV A
Sbjct: 121 MTCAFVCDSLRMLVVGVTTASELDQLMELDIEAQQRGRQEPVNSLHAVADALPGLGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ M + +P+ +G + +L GT LGI+L Y + P+ +++++ + +L +
Sbjct: 181 VLGVVITMQAIGGAPEAVGQKVAAALVGTFLGILLCYGVVGPVAARLQTLGETESQLLHV 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++ A++A+ GA P +A EY R+ +P+ RPS + + + +
Sbjct: 241 LRIAIVAFARGASPILAAEYARRSIPVDLRPSFQAMEISIKRDAR 285
>gi|120597322|ref|YP_961896.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|146294533|ref|YP_001184957.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|120557415|gb|ABM23342.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|145566223|gb|ABP77158.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
Length = 285
Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 83/285 (29%), Positives = 149/285 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS ++GL I + + GG+ GG L QP EI+I+ GAG+G ++ANP V+K+
Sbjct: 1 MSKLVGLLIILASVFGGYAWAGGALAALWQPAEILIIMGAGVGALIIANPQSVLKEMLEQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E+F + Y + L+ LM ++ + H+++P S+IF P VL++
Sbjct: 61 LKELFNKGKEDPELYPQLFPLMGTLMAQIQSQGLKVLDEHLENPQQSSIFLMYPAVLKHP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ D +R+ +G +++E++++EEI I ++L+P A S +GE++P GI+ A
Sbjct: 121 NVLQFLIDNLRVQSIGKISPHDLEHILEEEIHRIEEDRLRPSEAFSKVGEAMPGFGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M N+ ++G + +L GT +GI Y +P+ ++ ++
Sbjct: 181 VLGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPMAKALEHLVDRKSAQLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+ L+ + G P +AI+ GRK + RPS + + +
Sbjct: 241 IAAILVTFSKGKPPMMAIDAGRKQIQSENRPSFIELERWMEGQRS 285
>gi|167567202|ref|ZP_02360118.1| flagellar motor protein MotA [Burkholderia oklahomensis EO147]
Length = 281
Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats.
Identities = 82/277 (29%), Positives = 151/277 (54%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG+F+ + + GGF GG + QP EI+I+ GA G VM NP V+ + GV + +
Sbjct: 2 VIGIFLVLGGVFGGFILHGGALSSIWQPTEILIILGAASGALVMGNPRSVLIEMGVQIKK 61
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ K G + ++L +LY L+ ++ G + H+++P S +F P +L +L
Sbjct: 62 VIARKGNGTEFQRELLLMLYELLEMVRDGGLKALDQHVEEPRESELFQKYPMILAQPQLI 121
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI D R++ +G +E+E+++D+E++ I E ++P ++S + E++P GI+ A+LG
Sbjct: 122 AFIVDNFRLMAMGRITQHELESMLDQELEAIESELMRPSRSLSKVAEAMPGFGILAAVLG 181
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
I+ M N+ + +G + ++ GT +GI+L Y + PL S + + + VK
Sbjct: 182 IVTTMANIGGNVSDIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVNSEISAFECVKV 241
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
L A + G +A++ GRK++ L +PS + +
Sbjct: 242 VLCAQVAGKPTLLAVDAGRKLIQLDVKPSFSKLESWI 278
>gi|288962675|ref|YP_003452969.1| chemotaxis protein [Azospirillum sp. B510]
gi|288914941|dbj|BAI76425.1| chemotaxis protein [Azospirillum sp. B510]
Length = 295
Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats.
Identities = 110/277 (39%), Positives = 172/277 (62%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL ++GGFYAMGG +L QP EIVI+ GAG+GGF +AN V++D+ +
Sbjct: 1 MRLMFGLIAVFASVLGGFYAMGGRMAVLWQPVEIVIIIGAGIGGFAIANSPAVLRDTLRA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ I +A ++ Y D++ L+Y L+ K ++ E ID P S +FT P VL +
Sbjct: 61 VAAIARGRATPKNDYLDMIALVYGLLRVAKSKGMSQIEADIDKPAESPLFTQYPNVLRYD 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+CDY+R+I +G +++E+LM EE++ + E + A+ ++ ++LPA+GIV A
Sbjct: 121 RCISFLCDYLRLIALGQDNPHDLESLMAEELETLGRELNQVPKALQNLADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I AMG +S++P++LG IG +LTGT LG++LSY + P+ S + R + +Y
Sbjct: 181 VLGVINAMGAISEAPEVLGRMIGGALTGTFLGVLLSYGMVGPIASAARQRRESELNMYFC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+K AL AY+ G+ PQV EY RKVL +PS+ V
Sbjct: 241 IKAALCAYLRGSPPQVCAEYARKVLYTDIQPSLAEVE 277
>gi|296282271|ref|ZP_06860269.1| flagellar motor protein MotA [Citromicrobium bathyomarinum JL354]
Length = 287
Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats.
Identities = 87/285 (30%), Positives = 161/285 (56%), Gaps = 4/285 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG+ I ++ + GGF GG ++ P+E++I+ GA +G + N L +K G
Sbjct: 1 MYAIIGIVILLVLVFGGFVISGGAMGPVLHALPYEMMIIGGAAVGATIAGNSLAHLKAIG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++IF + + D + L LM LK E+H+++P NSTIF++ P +++
Sbjct: 61 GAFMKIFKGPQHDKQDHIDAIALTTQLMKVLKTDGPVALESHVNEPENSTIFSAYPNLMK 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
N+ L + I D + +++V G ++ +E +MD + +E +P HA+ + ++LPA+G
Sbjct: 121 NHALISLISDTLTLLVVSSGTLETHAVEEVMDNAMKTHFHELHEPQHALQTLADALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K M ++ + P+ILG IG +L GT LG++L+Y + PL +++K + +
Sbjct: 181 IVAAVLGVVKTMSSIDKPPEILGEMIGSALVGTFLGVLLAYGMVGPLATRLKQVIEQDEQ 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
++ VK+ +IA + G + +E R L + RP + + +
Sbjct: 241 IFHAVKQVIIASLYGHPQPLVVESARSSLGHTVRPGLTELLDALR 285
>gi|296531731|ref|ZP_06894558.1| chemotaxis protein MotA [Roseomonas cervicalis ATCC 49957]
gi|296267939|gb|EFH13739.1| chemotaxis protein MotA [Roseomonas cervicalis ATCC 49957]
Length = 297
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 161/289 (55%), Gaps = 2/289 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQP--FEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I+G+ + + GG+ GG +++ E++I+ G+G ++ + ++ +
Sbjct: 1 MIQIVGILGVFVAVFGGYLIAGGKMGVILGALGPELMIIGGSGFMTLLIGGDMALVTKTM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
S ++F + + + D+L LLY+L+ +K + E HI+ P S IF+ P +L
Sbjct: 61 KSFGKVFKGPSWNRKDFSDLLCLLYLLLRTHQKEGAAKLEKHIEKPEASAIFSRYPRLLR 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ L+ ICD +R I + N + + +M+ I+ E +KP AI M ++ PA+GIV
Sbjct: 121 DPALSGLICDTLRTITLNNKDPHRVGEMMETAIEKRHSENIKPAKAIQTMADAFPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IKAMG +S+SP++LG IG +L GT LG+ LSY L P++ ++K ++ ++
Sbjct: 181 AAVLGVIKAMGAISESPEVLGRMIGAALVGTFLGVFLSYGLVGPMSGRLKLILEEERKML 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+ + + +Y+ PQ+ +E GR+ +P +PS + + +++ + K
Sbjct: 241 DVTRAVITSYLENLSPQICVEVGRQSVPSKLQPSFDQMEEQLREAGRVK 289
>gi|254228818|ref|ZP_04922241.1| Flagellar motor component [Vibrio sp. Ex25]
gi|262396463|ref|YP_003288316.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
gi|151938765|gb|EDN57600.1| Flagellar motor component [Vibrio sp. Ex25]
gi|262340057|gb|ACY53851.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
Length = 267
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 135/267 (50%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GGN + QP E +I+ GA G ++ NP V+K+ + + Y ++
Sbjct: 1 MWAGGNLGAIWQPAEFLIIIGAAAGSLIIGNPPHVLKEMRRQVPATIKGPTEEHEYYMEL 60
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ LL L+ + ++HI+ P S++F + PT+ E++ L +FI D +R++ +G
Sbjct: 61 MALLNNLLETARNRGYKFLDSHIESPEQSSMFLAYPTIAEDHRLISFITDNLRLMAMGQM 120
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+E+E L+++EI+ I E L P ++ E+LP GI+ A+ GII M + S ++
Sbjct: 121 SPHELEGLLEQEIEAIQNEMLLPSRSLQRTAEALPGFGILAAVGGIIITMQAIDGSIAMI 180
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G + +L GT +GI Y +PL++ + + + V+ L+AY+ +AI
Sbjct: 181 GYHVAAALVGTFIGIFGCYCGLDPLSNAMAQRVKRNMTAFECVRATLVAYVAKKPTLLAI 240
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQYNH 285
+ GRK + L +P+ + + + +
Sbjct: 241 DAGRKHIQLDIKPTFNQMEKWLAEQEG 267
>gi|209965967|ref|YP_002298882.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
gi|209959433|gb|ACJ00070.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
Length = 286
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 97/282 (34%), Positives = 167/282 (59%), Gaps = 2/282 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IGLF C+ GG+ GG I+++ P E++I+ G+ + F++AN VIK S
Sbjct: 1 MFPAIGLFGVFFCVFGGYIIFGGKIGIIVEALPKEVMIIGGSAVASFLIANSSHVIKKSM 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ IFG + Y ++L LLY ++ +K E HI+ P S IF + P++++
Sbjct: 61 ADIKRIFGGARFHKKEYMELLSLLYQILKTMKTKGVLAIEQHIEKPMESNIFNAYPSIMK 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ FI DY+RM +G +E+E+LM++EI+ +E L HA+ M +++PA+GIV
Sbjct: 121 DPFTIKFIADYLRMFSIGVDNPHEMESLMEQEIEKAKHEDLHSSHALQTMADAMPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++++ P++LG IG +L GT +GI LSY + P+ S++K+ ++ + Y
Sbjct: 181 AAVLGVIKTMASINEPPEVLGKLIGGALVGTFMGIFLSYCIVAPIASRLKAITEEEMQFY 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++++ A+ A++ G PQV+IE RK +P P + + +
Sbjct: 241 MVIQAAITAHLAGYAPQVSIEAARKKVPSDYMPDFNELEEAL 282
>gi|85710172|ref|ZP_01041237.1| flagellar motor protein [Erythrobacter sp. NAP1]
gi|85688882|gb|EAQ28886.1| flagellar motor protein [Erythrobacter sp. NAP1]
Length = 287
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 84/280 (30%), Positives = 153/280 (54%), Gaps = 4/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILI--QPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IG+ + I+ + GGF GG ++ P E++++ GA +G ++ N + IK G
Sbjct: 1 MFAAIGIIVLIVMVFGGFTLAGGALGPILAALPLEMMMIGGAAIGAVLIGNSMHEIKLLG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ ++F + + D + L LM L+ E+H+ DP NS IF+ P +
Sbjct: 61 KGVAKVFKGPKFTNEDHIDAIALTSKLMKVLRSDGAVALESHVTDPANSAIFSEYPRLQS 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ + ICD + +++V G+ ++ IE+++D I L+E +P H I + ++ PA+G
Sbjct: 121 DPVVVDMICDPLTLMVVSSGSLDTHAIEDVIDNAIKTQLHEMEEPAHTIQSLADAFPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG+IK MG + Q P+ILG IG +L GT LG++L+Y P+ S++K +
Sbjct: 181 IVAAVLGVIKTMGAIDQPPEILGKMIGAALVGTFLGVLLAYGFAGPMASRLKQVNTHDQQ 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
++ +K+ +++ ++G + +E R LP + RP + +
Sbjct: 241 IFHSIKQVIVSSLHGYPQPLVLEAARSGLPPAHRPKLTDL 280
>gi|224825767|ref|ZP_03698871.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224601991|gb|EEG08170.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 287
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 78/287 (27%), Positives = 152/287 (52%), Gaps = 3/287 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G+ I + C+ GGF GG+ +++ QP E++I+ GA +G V+ NP V+ + G
Sbjct: 1 MQQLLGIGIVLGCVFGGFMLGGGSFHVIWQPVELLIICGAAIGAIVLGNPKHVLLEMGGQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K G + +L L+Y L+ + + H++ P S +F P VL+
Sbjct: 61 IKRVVLRKKHGAEFQRQLLLLMYELLITASQ-GLKALDEHVEAPRQSPLFNRYPLVLQQP 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D R++ +G ++E+E ++D+EID I E +P ++ +GE++P GI+ A
Sbjct: 120 KLLAFIVDNFRLMAMGKISAHELEGVLDQEIDAIHEELNQPSKSLHKIGEAMPGFGILAA 179
Query: 181 ILGIIKAMGNLSQSPK--ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LGI+ M ++ + +G ++ GT +GI Y + +PL++ + ++ +
Sbjct: 180 VLGIVMTMNSVGNGATTGEIAEKVGAAMVGTFIGIFFCYGVLDPLSNVMHQQVKEELSNF 239
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
VK + + +G P +AI+ GR+++ L+ +PS + +
Sbjct: 240 ESVKVVITTHASGKPPLLAIDAGRRLVQLNTKPSFSQLESWINALQG 286
>gi|162147456|ref|YP_001601917.1| flagellar motor protein MotA [Gluconacetobacter diazotrophicus PAl
5]
gi|209545565|ref|YP_002277794.1| flagellar motor protein MotA [Gluconacetobacter diazotrophicus PAl
5]
gi|161786033|emb|CAP55615.1| putative chemotaxis protein motA (Motility protein A)
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533242|gb|ACI53179.1| putative chemotaxis protein MotA (motility protein A)
[Gluconacetobacter diazotrophicus PAl 5]
Length = 293
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 91/288 (31%), Positives = 155/288 (53%), Gaps = 2/288 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M I GL +LC+ F A GG LI PFE++ + GA +G FVM N + +K
Sbjct: 1 MLFIGGLVFVLLCVFASFVASGGALAPLIMSMPFELLTILGAAVGIFVMGNSKEALKHVP 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L + + Y D+L LLY M + E HI++P++S IF P + +
Sbjct: 61 GDLRLVLAGPRHDKAAYLDLLVLLYRFMRLAQAKGDMALEEHIENPHDSAIFAMSPRIRD 120
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ICDY+R+ + +Y+++ +M E+ L E+L + + ++LPA+GIV
Sbjct: 121 DKTTCNLICDYLRLTSLNIENAYQMDEVMSRELKKNLTEQLHTAKCLQSIADALPALGIV 180
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
A+LG+IK M ++S+ P +LG IG +L GT LG++LSY + PL ++++ ++ R +
Sbjct: 181 AAVLGVIKTMASISKPPAVLGAMIGGALVGTFLGVLLSYGVVAPLAARMRDVVMQDSRYH 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+++ L+ ++ G+ PQV E GRK +P PS + + + ++
Sbjct: 241 DLIRIVLVTHLQGSPPQVCAEIGRKDIPHIFMPSFSELDMALTESSNP 288
>gi|170737029|ref|YP_001778289.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169819217|gb|ACA93799.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 290
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 157/292 (53%), Gaps = 6/292 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I G+ I + C+ GGF MGG+ L QP E++IV G+ +G V+ N V+ D G
Sbjct: 1 MQQIFGILIVLGCVFGGFTFMGGDFRKLWQPVELLIVVGSAVGALVLGNSRHVLVDMGKQ 60
Query: 61 LLEIFGYKAL--GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++ G + ++ L ++Y L+ + +NH+++P+ S +F P VL+
Sbjct: 61 LRKVMGRRKRTANKELQRQQLLVMYELLNIGR--DLKALDNHVENPHESRLFQRYPLVLQ 118
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
EL TFI D +R++ +G S+E+E+++++E+ I P ++ + E++P GIV
Sbjct: 119 GPELLTFIVDNLRLMAMGKISSHELESVLEQELVAIQENIELPSRSLKKISEAMPGFGIV 178
Query: 179 GAILGIIKAMGNLSQ--SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
A+LG++ AMG L S L + ++ GTL+GI Y + +P+++ IK +
Sbjct: 179 AAVLGVVIAMGGLGDGASAAELAENVAAAMIGTLIGIFFCYGVLDPVSNLIKQAMKAEMS 238
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+K L+A+ G P +AI+ GR+++ + +PS + + Q + ++
Sbjct: 239 EMECMKVILVAFAGGKPPLLAIDAGRRMMQPACKPSFAQLEGWIGQLDAGRE 290
>gi|119947182|ref|YP_944862.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119865786|gb|ABM05263.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 287
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 91/287 (31%), Positives = 159/287 (55%), Gaps = 1/287 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + C+ GGF +GGN +L +P EI+I+ GAG G ++ + +
Sbjct: 1 MIRLAGLVFIMFCLFGGFMIVGGNLKLLWKPTEILIIFGAGSGALIVGSSKNCLILITSQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKK-GSRNETENHIDDPYNSTIFTSIPTVLEN 119
L ++F ++ Y +L L Y LM K E+H++D NS+IF P VL N
Sbjct: 61 LKDVFTVNPYSKEFYRQLLSLHYQLMRVKKMPSGAKVLESHVEDYENSSIFNQYPLVLRN 120
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ L FI D RM I ++EI+ ++ EI++I E L+P A+ + +SLP +G++G
Sbjct: 121 DLLVHFIVDNFRMTISSLVAAHEIDATLESEIEVITSELLEPAVALKKLADSLPGLGVLG 180
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++GII M ++ ++G+ I +L GT LG+ Y L +PL+ +KS +K +
Sbjct: 181 AVMGIILTMQSIDTDIAMIGSNIATALIGTFLGVFGCYCLFDPLSCAVKSNVMKSIVPFE 240
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+VK+ L+A+++ P ++I+ GR+ + + E+P+ +I+ + Q +
Sbjct: 241 VVKQILVAHVSNRSPLLSIDSGRRAIEIDEKPAFKIIEEWADQLDKP 287
>gi|296122829|ref|YP_003630607.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296015169|gb|ADG68408.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 287
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 77/287 (26%), Positives = 144/287 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG + C++GG+ GG+ LI P E++ + GA LG ++ K++KD S
Sbjct: 1 MFVIIGFIVVTGCVLGGYTWAGGHVEALIHPSEVLTIGGASLGAMLVMGSPKILKDLIKS 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ + Y D+ KL Y L+ +K E H++DP+ S IF+ P + +++
Sbjct: 61 IIGALKGSPFNKKAYGDLFKLSYDLLKTARKDGLLALEPHLNDPHESKIFSKYPRLQKDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TTF+CD + ++ + ++ +L+ ++I ++ E + ++ +++P GIV A
Sbjct: 121 HFTTFLCDGLSSVVEASMSQEQLHDLLQKQIAVMEEEHHQAVGILAKSADAMPGFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGI+ MG + + +G +G +L GT LGI+ SY PL +++ + Y
Sbjct: 181 VLGIVITMGAIDGPVEEIGHKVGAALVGTFLGILASYGFMAPLAARMDLLGKSEMDFYRT 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+ A + GA P+ IE R+V+ RP + + + + +
Sbjct: 241 TAAIIEAAIGGAAPKQIIEQARRVVCSEARPERVELEKMLKEADAAA 287
>gi|56551499|ref|YP_162338.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761143|ref|ZP_04759232.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260752894|ref|YP_003225787.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543073|gb|AAV89227.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis ZM4]
gi|241374762|gb|EER64223.1| flagellar motor protein MotA [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552257|gb|ACV75203.1| chemotaxis MotA protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 287
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 79/280 (28%), Positives = 145/280 (51%), Gaps = 4/280 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IG I ++ + GGF GG+ +++ P E++++ GA +G V N + +K
Sbjct: 1 MFAAIGFTILLVMVFGGFAITGGHLGPVLEAIPHELIVIGGASVGSVVAGNSMLELKLLL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+F ++ Y + + L+ LM L+ E+H+++P +S F P +L
Sbjct: 61 GGFKSVFKGPKFNKEDYQNTIFLVGKLMRTLRTEGPVALESHVENPESSAFFAEYPKLLT 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
+ L + I D +R+++V G +E+++D I E P + ++ E+LPA G
Sbjct: 121 DKTLVSLITDTLRLVVVSSGTLDPNAVEDVIDNTIKTHHSETSLPADILQNLSEALPAFG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ Q P ILG IG +L GT LG++L+Y + P+ ++ ++
Sbjct: 181 IVAAVLGVVKTMGSIDQPPPILGAMIGSALVGTFLGVLLAYGIVAPMANRCRAVIDSDAH 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+Y ++K+ +I+ M G + IE R +P +P +
Sbjct: 241 IYQVIKQMIISSMQGHPLPLVIEAARSDIPEENKPEFAEI 280
>gi|301643538|ref|ZP_07243581.1| flagellar motor protein MotA [Escherichia coli MS 146-1]
gi|301078089|gb|EFK92895.1| flagellar motor protein MotA [Escherichia coli MS 146-1]
Length = 265
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 81/257 (31%), Positives = 135/257 (52%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+GL + + C+ GG++ GG + QP E++I+ GAG G ++ NP V+K+
Sbjct: 1 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K LG + +L LY L+ ++ G + HI+ P STIF P VL
Sbjct: 61 IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A
Sbjct: 121 RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L
Sbjct: 181 VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC 240
Query: 241 VKKALIAYMNGAIPQVA 257
V+ L+A G +A
Sbjct: 241 VRTVLVAQAGGKPTLLA 257
>gi|258592513|emb|CBE68822.1| Chemotaxis protein [NC10 bacterium 'Dutch sediment']
Length = 288
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 80/270 (29%), Positives = 144/270 (53%), Gaps = 1/270 (0%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
GG +LIQP E +I+ GA +GG ++A PLKV+K ++ I L + Y +VL
Sbjct: 20 IEGGPIPVLIQPVEFLIIGGASIGGLLIAVPLKVLKILISQVMGIL-GSGLDKQAYLEVL 78
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
++++ L K+ ++ + P S IF+ T + + F+CD +R+++ G
Sbjct: 79 QVMHDLFTKAKREGFTAIDSDLASPDKSPIFSKYNTFTKQHHAMNFLCDSLRLVVDGAVD 138
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG 199
E++ +MD E+D E + ++ +G+SLP +GIV A+LGI+ M + P+ +G
Sbjct: 139 PEELDAIMDIELDTHHEEGGQVPSILAKVGDSLPGLGIVAAVLGIVITMQAIDGPPEEIG 198
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
+ V+L GT +GI+ SY + PL+ ++ + + +K L+A+ GA P +A+E
Sbjct: 199 HKVAVALVGTFVGILASYGVVQPLSQSLEHQAQCEGKYLACIKTCLVAFARGAPPIIAVE 258
Query: 260 YGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+GR+V+ +RPS + + + A
Sbjct: 259 FGRRVIFSYDRPSNQEMESACKGTPLKRAA 288
>gi|304413522|ref|ZP_07394995.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
gi|304284365|gb|EFL92758.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
Length = 285
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 82/285 (28%), Positives = 151/285 (52%), Gaps = 1/285 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL I + C+IGG+ GG QP EI+I+ GAG+G ++ANP V+ +
Sbjct: 1 MQKLLGLIIIMFCVIGGYLMSGGIMSSFWQPGEIIIILGAGMGAMILANPKYVLVEMWQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + L LLY L+ + +G + + HI+ P NST+F P +L++
Sbjct: 61 IKSVVSKNQYTLEFQQ-QLLLLYELLEMVDEGGLKKLDEHIEIPENSTLFQKYPLILKHK 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E ++++E+ + + L P ++ E++P GI A
Sbjct: 120 GLVTFISDNFRLMAMGKINEHELEGILEQELGAVEEQLLVPSRSMQRTAEAMPGFGICAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y +PL + ++ K+ +
Sbjct: 180 VLGIIITMQSIDGSIALIGIKVAAALIGTFLGVFICYCFMDPLANAMEQEMKKRLSFFEC 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
V+ L+ ++ G +A++ GRK+LPL +P+ + + +
Sbjct: 240 VRIVLVNHVAGKPSLLAVDSGRKMLPLDNKPTFATLDSWINKMEG 284
>gi|239906205|ref|YP_002952944.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239796069|dbj|BAH75058.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 281
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 84/281 (29%), Positives = 148/281 (52%), Gaps = 1/281 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL + I + G+ GG +L+QP E VI+ GA LG ++ + +
Sbjct: 1 MIVMVGLLVVIASVCLGYLMEGGVFAVLVQPAEWVIIIGAALGAMLVGSTRNALTLIVKG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + +G+D Y + L L L+ +++ E I+ P S IF + ++
Sbjct: 61 LPKALFPAHIGRDHYLEALACLARLLGKIRREGLMSIEGDIEHPETSPIFAKATLLSKDK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FICD MR+ +V + E+E LMD ++ I + P H + + ESLP +GIV A
Sbjct: 121 AALAFICDTMRVYLVSG-DAQELEQLMDLDLAAIHLQASSPAHNLGKVAESLPGLGIVAA 179
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ MG +SQ P++LG +IG +L GT LG++L Y PL +++ +++ + +
Sbjct: 180 VLGVVLTMGKISQPPEVLGHSIGAALVGTFLGVLLCYGFVGPLAGNLENQAMERQTYFSV 239
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
++ + GA P +A+EYGR+ +P + RP+ + ++
Sbjct: 240 IRAVIAGAARGATPLIAVEYGRRAIPEALRPNFADLEGQLK 280
>gi|326386938|ref|ZP_08208552.1| flagellar motor protein MotA [Novosphingobium nitrogenifigens DSM
19370]
gi|326208618|gb|EGD59421.1| flagellar motor protein MotA [Novosphingobium nitrogenifigens DSM
19370]
Length = 287
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 87/285 (30%), Positives = 153/285 (53%), Gaps = 4/285 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IG+ + I+ + GGF GG +++ P E++I+ GA +G + N L +K G
Sbjct: 1 MYQGIGIVVLIVMVFGGFAFTGGALGPVMEAIPHELLIIGGAAIGATITGNSLHELKGIG 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L ++F + + D + L LM L+ E+H+ DP STIF P +L
Sbjct: 61 AGLGKVFKGPKHNKQDHVDAIVLSTKLMKILRSDGPVALESHVTDPKTSTIFAEFPRILG 120
Query: 119 NNELTTFICDYMRMIIV--GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
N L + ICD + +I+V G + +E++MD + +E+ + HA+ + ++LPA+G
Sbjct: 121 NKALVSLICDTLTLIVVSSGTLEVHAVEDVMDHAMKTHFHEESEAQHALQGLSDALPALG 180
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
IV A+LG++K MG++ + P ILG IG +L GT +GI+L+Y + PL ++K +
Sbjct: 181 IVAAVLGVVKTMGSIDKPPTILGAMIGSALVGTFMGILLAYGIVAPLAGRLKQVLDQDEM 240
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
++ VK+ ++A ++G + +E R L + RP + + +
Sbjct: 241 IFQAVKQVIVASLHGWPQPLVVESARSGLGHAFRPGLSELLDALR 285
>gi|307824076|ref|ZP_07654303.1| flagellar motor protein MotA [Methylobacter tundripaludum SV96]
gi|307734860|gb|EFO05710.1| flagellar motor protein MotA [Methylobacter tundripaludum SV96]
Length = 282
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 92/285 (32%), Positives = 144/285 (50%), Gaps = 3/285 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I G I + I+GGF GG+P +L QPFE VI+ GA +G FV N + VIK +
Sbjct: 1 MLVIAGYLILSISIMGGFIGGGGHPGVLFQPFEFVIIIGAAVGAFVCGNSMSVIKAAISQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ Y ++L Y + +K E+ IDDP +S +FT P +L ++
Sbjct: 61 ATATLKGTKYNKEYYLELLLCFYAITTKTRKEGLLSLESIIDDPKSSPVFT--PRILGDH 118
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FICD +R+I+ G Y +E LMD+E++ E P AI ++ + LPA GIV A
Sbjct: 119 HLLEFICDNLRLIVTG-VEVYALEELMDQELETHHEEAHAPVKAIQNLADGLPAFGIVAA 177
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M ++ P LG I +L GT LGI+L+Y P+ + + +Y
Sbjct: 178 VMGVVHTMESVGIPPSELGKLIAAALVGTFLGILLAYGFIGPVGAVMSERFEASGNVYKC 237
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+K L+ G P + EY R ++ S RP + +++
Sbjct: 238 AQKGLLCCAKGVSPAMTAEYMRTMIASSMRPGFLELEEQLRANKG 282
>gi|42524630|ref|NP_970010.1| flagellar motor protein MotA [Bdellovibrio bacteriovorus HD100]
gi|39576840|emb|CAE78069.1| flagellar motor protein [Bdellovibrio bacteriovorus HD100]
Length = 265
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 77/257 (29%), Positives = 140/257 (54%)
Query: 31 PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLK 90
P E++I+ GA LG +++ANP+KVIK ++ K + Y ++L++++ L +
Sbjct: 9 PLELMIIGGAALGAYIIANPMKVIKAGFKMSIKAMTAKGPQKQDYVELLQMMFQLFQAFR 68
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
K E HI++P S IF + P+ + N+ F+CD M++ + Y++++L+D +
Sbjct: 69 KEGPQGIEKHIEEPDKSDIFKAYPSFMHNHHAVHFLCDTMKITLSAEMSPYDVDDLLDAD 128
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTL 210
I I +E+ HA+ + + P +GIV A+LGI+K M +L+ + +G + +L GT+
Sbjct: 129 IKAIHHEEHMAVHAVQTVADGFPGLGIVAAVLGIVKTMAHLTDGVEKIGALVASALVGTM 188
Query: 211 LGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
LG+ +Y L P +++ + + R +K A++A GA P V +EY R+ + ER
Sbjct: 189 LGVFGAYGLIGPTATKMGADIDAEGRYLGCIKAAMVALQRGAPPIVCVEYARRSIMPEER 248
Query: 271 PSIEIVAQEVLQYNHNK 287
PS E V + +
Sbjct: 249 PSFEEVDKATKEIKKAA 265
>gi|225164038|ref|ZP_03726323.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801344|gb|EEG19655.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 289
Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats.
Identities = 84/288 (29%), Positives = 148/288 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ +IG + + +GGF GGNP +L+ E V++ G LG ++A+P V++D
Sbjct: 1 MTILIGALVVLSATLGGFMLAGGNPLVLLHLSEYVVIIGVALGLLIIASPPAVMRDIIRK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ E + + ++ Y D+LKLLY L ++ E H+ P S IF PT +
Sbjct: 61 VGEAIRGRRMSREDYFDLLKLLYELFVLGRRNGLIALEEHVSAPEQSAIFQKYPTFALDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + +R +I G + ++E L+ E+ E P H + +G+SLP IGIV A
Sbjct: 121 ERREFLMNALRPVIDGRIKPDQLEELLGAELRAKAEEAEHPVHLLQLVGDSLPGIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M +++ P+++G + +LTGTLLG+ +Y NP+ +++K + +
Sbjct: 181 VLGIINTMASIADGPEVVGLRVAAALTGTLLGVFFAYGFVNPMANRVKLNNITNQQYLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+ +++ + G P ++E R+ L S +P E + + K
Sbjct: 241 IMISVVGFAKGLAPITSVEVARRSLNSSVQPGAEELESTLKSMPAPGK 288
>gi|227326902|ref|ZP_03830926.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 217
Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 127/212 (59%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ LL+ +M ++ E ID+P S IF+S P +L +N + FI DY+R+++ GN
Sbjct: 1 MALLFRVMAKSRQQGMLSLEFDIDNPRESEIFSSYPNILADNTVVEFITDYLRLMVSGNM 60
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++EIE LMDEEI+ I +E P +++ MG+ LPA GIV A++G++ ++ + + L
Sbjct: 61 NAFEIETLMDEEIETIEHESEVPASSLTMMGDGLPAFGIVAAVMGVVHSLAYVDRPAAEL 120
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I ++ GT LGI+L+Y +PL + ++ ++ ++ +K L++ +NG PQ+A+
Sbjct: 121 GMMIAHAMVGTFLGILLAYGFVSPLAALLRQKNAEKIKVLQCIKVTLLSSLNGYAPQIAV 180
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
E+GRK L +ERPS + + + + + +
Sbjct: 181 EFGRKTLYSTERPSFTELEEHIRRVKSPTQQA 212
>gi|73913488|gb|AAZ91671.1| MotA [Wigglesworthia glossinidia endosymbiont of Glossina
morsitans]
Length = 247
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 129/233 (55%)
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
F +D Y DV+ L+Y L+ ++ +E ID+P S IF++
Sbjct: 2 FLQLSKHFQNYFTPSRYNKDMYMDVMSLIYRLLSKSRQSGLISSEKDIDNPETSKIFSNY 61
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
P +L++ + F+ DY+R++I GN +YEIE LM+EEI+ E P ++ +G++LP
Sbjct: 62 PLMLKDKLIIDFLVDYLRLMISGNLNAYEIEALMNEEIETCEQEHEVPITSLLQVGDALP 121
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A GIV A++G++ A+ + LG I ++ GT LGI+L+Y PL + +K +
Sbjct: 122 AFGIVAAVMGVVNALAAADRPAAELGELIAHAMVGTFLGILLAYGCVMPLGALLKQKSDE 181
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
++ +K L++ +NG PQ+AIE+GRK+L SERPS + + + Q +
Sbjct: 182 HIKMLQCIKITLLSSINGYAPQIAIEFGRKILYSSERPSFTELEEHLRQVKKS 234
>gi|167725892|ref|ZP_02409128.1| flagellar motor protein MotA [Burkholderia pseudomallei DM98]
gi|167905051|ref|ZP_02492256.1| flagellar motor protein MotA [Burkholderia pseudomallei NCTC 13177]
Length = 270
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 80/269 (29%), Positives = 142/269 (52%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+ GGF GG + QP EI+I++GA G VM NP V+ + G + + K+ G +
Sbjct: 1 MFGGFVLHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQIKHVIARKSNGVE 60
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
++L +LY L+ ++ G + H+++P S +F P +L L FI D R++
Sbjct: 61 FQRELLLMLYELLETVRDGGLKALDQHVEEPRESDLFRKYPMILAQPRLIAFIVDNFRLM 120
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A+LGI+ M N+
Sbjct: 121 AMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAAVLGIVTTMANIGG 180
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
S +G + ++ GT +GI+L Y + PL S + VK L A + G
Sbjct: 181 SVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALECVKVVLCAQVAGKP 240
Query: 254 PQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+A++ GRK++ L +PS + +++
Sbjct: 241 TLLAVDAGRKLIQLDVKPSFSKLESWIME 269
>gi|257141386|ref|ZP_05589648.1| flagellar motor protein MotA [Burkholderia thailandensis E264]
Length = 270
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 80/269 (29%), Positives = 142/269 (52%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+ GGF GG + QP EI+I++GA G VM NP V+ + G + + K+ G +
Sbjct: 1 MFGGFVLHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQIKHVIARKSNGVE 60
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
++L +LY L+ ++ G + H+++P S +F P +L L FI D R++
Sbjct: 61 FQRELLLMLYELLETVRDGGLKALDQHVEEPKESDLFRKYPMILAQPRLIAFIVDNFRLM 120
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A+LGI+ M N+
Sbjct: 121 AMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAAVLGIVTTMANIGG 180
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
S +G + ++ GT +GI+L Y + PL S + VK L A + G
Sbjct: 181 SVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALECVKVVLCAQVAGKP 240
Query: 254 PQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+A++ GRK++ L +PS + +++
Sbjct: 241 TLLAVDAGRKLIQLDVKPSFSKLESWIME 269
>gi|167576626|ref|ZP_02369500.1| flagellar motor protein MotA [Burkholderia thailandensis TXDOH]
Length = 270
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 80/269 (29%), Positives = 142/269 (52%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+ GGF GG + QP EI+I++GA G VM NP V+ + G + + K+ G +
Sbjct: 1 MFGGFVMHGGALSSIWQPTEILIISGAAAGALVMGNPRSVLSEMGSQIKHVIARKSNGVE 60
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
++L +LY L+ ++ G + H+++P S +F P +L L FI D R++
Sbjct: 61 FQRELLLMLYELLETVRDGGLKALDQHVEEPKESDLFRKYPMILAQPRLIAFIVDNFRLM 120
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+G +E+E ++D+E++ I E ++P ++S + ES+P GI+ A+LGI+ M N+
Sbjct: 121 AMGRITQHELEGMLDQELEAIESELMQPSRSLSKIAESMPGFGILAAVLGIVTTMANIGG 180
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
S +G + ++ GT +GI+L Y + PL S + VK L A + G
Sbjct: 181 SVSEIGLQVAAAMVGTFIGILLCYGVLEPLASAMVHRVKSDMSALECVKVVLCAQVAGKP 240
Query: 254 PQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+A++ GRK++ L +PS + +++
Sbjct: 241 TLLAVDAGRKLIQLDVKPSFSKLESWIME 269
>gi|331663389|ref|ZP_08364299.1| chemotaxis protein MotA [Escherichia coli TA143]
gi|331059188|gb|EGI31165.1| chemotaxis protein MotA [Escherichia coli TA143]
Length = 247
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 131/239 (54%), Gaps = 4/239 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + + + GG+ GG+ L QP E+VI+AGAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + Y D+L LLY LM ++ E I++P S IF S P +L ++
Sbjct: 61 LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II G+ ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAI----GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
++G++ A+G+ + LG A G +G+ + + + TS+ + +
Sbjct: 181 VMGVVHALGSADRPAAELGAAYRTCDGGDFPRHFIGLRIYFPISECFTSEKRRNQQNDA 239
>gi|134094522|ref|YP_001099597.1| proton conductor component of motor, torque generator
[Herminiimonas arsenicoxydans]
Length = 208
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 123/207 (59%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ LL+ ++ ++K E ID P S IFT PTVL ++ + FI DY+R+++ GN
Sbjct: 1 MTLLFEILTKVRKEGLMSIEGDIDAPEESAIFTKYPTVLADHHIIEFITDYLRLMVSGNM 60
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+++IENLMD EID E P H I+ MG+ LPA GIV A++G++ M ++ P L
Sbjct: 61 DAFQIENLMDNEIDTHHAEGEIPVHCIAKMGDGLPAFGIVAAVMGVVHTMASVGLPPAEL 120
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I +L GT LGI+L+Y +PL+S ++ + +++ +K L+A +NG P +A+
Sbjct: 121 GILIANALVGTFLGILLAYGFVSPLSSTLEQKLHESSKVFQCIKVTLLASLNGYAPALAV 180
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQYNH 285
E+GRKVL +ERPS + + Q
Sbjct: 181 EFGRKVLFSTERPSFSELEDHIKQSKS 207
>gi|254255075|ref|ZP_04948392.1| Flagellar motor component [Burkholderia dolosa AUO158]
gi|124899720|gb|EAY71563.1| Flagellar motor component [Burkholderia dolosa AUO158]
Length = 290
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G+ I + C++GGF MGGN L QP E++I+ GA G V+ NP V+ +
Sbjct: 1 MQQIVGIVIVMACVLGGFIFMGGNVAKLWQPVELLIIVGAAAGALVIGNPRHVLSEMASQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + T LL + + H++ P+ S++FT P VL
Sbjct: 61 VRKVVTGRKRASGTEFQRQLLLLMYELLEVGRDLKALDQHVEAPHESSLFTRYPLVLAEP 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI D RM+ +G ++E+E ++++E+ I + +P ++ + +++P GIV A
Sbjct: 121 KLLAFIVDNFRMMALGKISAHELEGVLEQELVAIHEDLEQPSRSMKKISDAMPGFGIVAA 180
Query: 181 ILGIIKAMG--NLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LG++ AM N S L +G ++ GT +GI Y + +PL+S I + +
Sbjct: 181 VLGVVMAMNGINAGASAGELAEQVGAAMIGTFIGIFFCYGVLDPLSSVIGQLVRAEMSDF 240
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
K L+AY G P +AI+ GR+++ L +PS + + + +
Sbjct: 241 ECAKVVLVAYAAGKPPLLAIDAGRRLVQLINKPSFAQLETWIKDLDGAR 289
>gi|318604275|emb|CBY25773.1| flagellar motor rotation protein MotA [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 288
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 84/282 (29%), Positives = 153/282 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL + + C+IGG+ GG QP EI+I+ G G+G ++ANP V+K+ +
Sbjct: 1 MQKLIGLLVIMACVIGGYIMSGGILSSFWQPGEIIIIFGCGIGAMILANPGYVLKEMWLQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ I + +L LLY L+ + +G + HI+ P NS +F P +L+++
Sbjct: 61 IVAIMRKSEYTAEFQQQLLMLLYELLEMVDEGGLKRLDEHIEVPANSPLFQRYPLILQDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E ++++E+ + E L P + E++P GI A
Sbjct: 121 HLVTFISDNFRLMAMGKINQHELEGILEQELSAVEEELLVPSRSFHRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ K+ +
Sbjct: 181 VLGIIITMQSIDGSIALIGVKVAAALIGTFLGVFICYCLMDPLANAMEQEMKKKLAFFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+ ++ G +A++ GRK+LPL +P+ + + +
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPLDSKPTFATLDSWINK 282
>gi|332162881|ref|YP_004299458.1| Lateral flagellar motor protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|158327336|emb|CAM82842.1| flagellar motor protein MotA [Yersinia enterocolitica W22703]
gi|325667111|gb|ADZ43755.1| Lateral flagellar motor protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863329|emb|CBX73452.1| chemotaxis protein lafT [Yersinia enterocolitica W22703]
Length = 288
Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 84/282 (29%), Positives = 154/282 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IGL + + C+IGG+ GG QP EI+I+ G+G+G ++ANP V+K+ +
Sbjct: 1 MQKLIGLLVIMACVIGGYIMSGGILSSFWQPGEIIIIFGSGIGAMILANPGYVLKEMWLQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ I + +L LLY L+ + +G + HI+ P NS +F P +L+++
Sbjct: 61 IVAIMRKSEYTAEFQQQLLMLLYELLEMVDEGGLKRLDEHIEVPANSPLFQRYPLILQDH 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E ++++E+ + E L P + E++P GI A
Sbjct: 121 HLVTFISDNFRLMAMGKINQHELEGILEQELSAVEEELLAPSRSFHRTAEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ K+ +
Sbjct: 181 VLGIIITMQSIDGSIALIGVKVAAALIGTFLGVFICYCLMDPLANAMEQEMKKKLAFFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+ ++ G +A++ GRK+LPL +P+ + + +
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPLDSKPTFATLDSWINK 282
>gi|108809035|ref|YP_652951.1| flagellar motor protein MotA [Yersinia pestis Antiqua]
gi|150260229|ref|ZP_01916957.1| lateral flagellar proton motor protein A [Yersinia pestis
CA88-4125]
gi|162420069|ref|YP_001604824.1| flagellar motor protein MotA [Yersinia pestis Angola]
gi|165925094|ref|ZP_02220926.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166008864|ref|ZP_02229762.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212123|ref|ZP_02238158.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399319|ref|ZP_02304843.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167418793|ref|ZP_02310546.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167466316|ref|ZP_02331020.1| chemotaxis protein MotA [Yersinia pestis FV-1]
gi|218927932|ref|YP_002345807.1| flagellar motor protein MotA [Yersinia pestis CO92]
gi|229840643|ref|ZP_04460802.1| Flagellar motor rotation protein motA [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842805|ref|ZP_04462957.1| Flagellar motor rotation protein motA [Yersinia pestis biovar
Orientalis str. India 195]
gi|294502808|ref|YP_003566870.1| flagellar motor protein [Yersinia pestis Z176003]
gi|108780948|gb|ABG15006.1| putative flagellar motor transmembrane channel protein [Yersinia
pestis Antiqua]
gi|115346543|emb|CAL19420.1| putative flagellar motor transmembrane channel protein [Yersinia
pestis CO92]
gi|149289637|gb|EDM39714.1| lateral flagellar proton motor protein A [Yersinia pestis
CA88-4125]
gi|162352884|gb|ABX86832.1| chemotaxis protein MotA [Yersinia pestis Angola]
gi|165923294|gb|EDR40445.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992203|gb|EDR44504.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206869|gb|EDR51349.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962787|gb|EDR58808.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051823|gb|EDR63231.1| chemotaxis protein MotA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|229690072|gb|EEO82129.1| Flagellar motor rotation protein motA [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697009|gb|EEO87056.1| Flagellar motor rotation protein motA [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|262360840|gb|ACY57561.1| flagellar motor protein [Yersinia pestis D106004]
gi|262364785|gb|ACY61342.1| flagellar motor protein [Yersinia pestis D182038]
gi|294353267|gb|ADE63608.1| flagellar motor protein [Yersinia pestis Z176003]
Length = 288
Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 82/282 (29%), Positives = 157/282 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + + C+IGG+ GG+ QP EI+I+ G+G+G ++ NP V+++
Sbjct: 1 MQKLFGLLVIMGCVIGGYLMSGGSLSSFWQPGEIIIIFGSGIGALILGNPGSVLQEMWHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + + +L LLY L+ + +G + HI+ P NS++F P +L++
Sbjct: 61 ILAVARRSEYTVEFQQQLLLLLYELLEMVDEGGLKRLDEHIEIPANSSVFQRYPLILQDL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI A
Sbjct: 121 HLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL++ ++ K+ L+
Sbjct: 181 VLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+ ++ G +A++ GRK+LP+ +P+ + + +
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPMDNKPTFATLDSWINK 282
>gi|153947051|ref|YP_001399653.1| flagellar motor protein MotA [Yersinia pseudotuberculosis IP 31758]
gi|152958546|gb|ABS46007.1| chemotaxis protein MotA [Yersinia pseudotuberculosis IP 31758]
Length = 288
Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 85/282 (30%), Positives = 156/282 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I GL + ++C+IGG+ GG QP EI+I+ G+G+G ++ NP V+KD
Sbjct: 1 MQKIFGLLVIMVCVIGGYLMSGGVLSSFWQPGEIIIIFGSGIGAMILGNPRSVLKDMWHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + + +L LLY L+ + +G + HI+ P NS++F P +L++
Sbjct: 61 ILAVTRRSEYTGEFQQQLLLLLYELLEMVDEGGLKRLDEHIEIPANSSVFQRYPLILQDL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI A
Sbjct: 121 HLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL + ++ K+ L+
Sbjct: 181 VLGIIITMQSIDGSIAMIGVKVAAALIGTFLGVFICYCLMDPLANAMEQEIKKKLALFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+ ++ G +A++ GRK+LP+ +P+ + + +
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPMDNKPTFATLDSWINK 282
>gi|51597619|ref|YP_071810.1| flagellar motor protein MotA [Yersinia pseudotuberculosis IP 32953]
gi|186896752|ref|YP_001873864.1| flagellar motor protein MotA [Yersinia pseudotuberculosis PB1/+]
gi|51590901|emb|CAH22557.1| putative flagellar motor transmembrane channel protein [Yersinia
pseudotuberculosis IP 32953]
gi|186699778|gb|ACC90407.1| MotA/TolQ/ExbB proton channel [Yersinia pseudotuberculosis PB1/+]
Length = 288
Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats.
Identities = 82/282 (29%), Positives = 157/282 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + + C+IGG+ GG+ QP EI+I+ G+G+G ++ NP V+++
Sbjct: 1 MQKLFGLLVIMGCVIGGYLMSGGSLSSFWQPGEIIIIFGSGIGAMILGNPGSVLQEMWHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + + +L LLY L+ + +G + HI+ P NS++F P +L++
Sbjct: 61 ILAVARRSEYTVEFQQQLLLLLYELLEMVDEGGLKRLDEHIEIPANSSVFQRYPLILQDL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI A
Sbjct: 121 HLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL++ ++ K+ L+
Sbjct: 181 VLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+ ++ G +A++ GRK+LP+ +P+ + + +
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGRKMLPMDNKPTFATLDSWINK 282
>gi|254444187|ref|ZP_05057663.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198258495|gb|EDY82803.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 286
Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 86/278 (30%), Positives = 144/278 (51%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M IIG I + +G F GG+ +L P EI+ + G LG V+ P V+ + +
Sbjct: 1 MFVIIGSLIVLGATVGAFIWSGGSLILLWHPPEILAIGGISLGVAVICAPKDVLIHTVHA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L +D Y D++K++Y L ++ + H+ P +S+IF + P+ L +
Sbjct: 61 ILGALKGAGPSKDDYLDLMKVMYELFMLGRRNGLLALDEHVSSPESSSIFQNYPSFLADK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ TF+C +R II G + ++E L+ EID + P + + +G+SLP IGIV A
Sbjct: 121 DKVTFLCSALRPIIDGKIKPDQLEPLLKAEIDAKKHAAHGPINVLHLLGDSLPGIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L Q ++G I +L+GT LGI ++Y NPL + I+ + YI
Sbjct: 181 VMGIILTMSVLDQGVMVIGGKISAALSGTFLGIFVAYGFINPLCNVIEFGNEAEETYYIC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+ +++ A+ G P +A+E R+ L S PS + +
Sbjct: 241 MSRSIGAFARGLAPIMAVELARRSLEASMVPSADDLEN 278
>gi|148974249|ref|ZP_01811782.1| MotA/TolQ/ExbB proton channel [Vibrionales bacterium SWAT-3]
gi|145965946|gb|EDK31194.1| MotA/TolQ/ExbB proton channel [Vibrionales bacterium SWAT-3]
Length = 290
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 77/290 (26%), Positives = 132/290 (45%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG+ + + I GGF +GG + + EI+I+ GA +M+ +K
Sbjct: 1 MQKLIGIVVVLSVIFGGFIFLGGKFEFIFKLSEIIIIFGAAFASLLMSTTSSTLKLMVQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +D Y +L L++ L+ + + + H+++P +S IF P + ++
Sbjct: 61 VGIAFRSTPYNKDYYQQLLSLMFELINTARVKNIKALDIHVENPESSKIFAKYPRITKDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T FI D R +I G + +E ++EEI+ + E KP + E++P +GI+ A
Sbjct: 121 LTTQFIIDSFRQVITGKQSQHLLEAFLEEEIEHLEDEYTKPSEKLHATAEAMPGLGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L +G I +L GT G+ Y + P++S IK Q +
Sbjct: 181 VMGIILTMQGLDGEISEIGKNIAGALVGTFTGVFGCYCVLGPMSSSIKDVSENQLAPLLC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK L AY G + GRK + +PS + + V +S
Sbjct: 241 VKSILSAYAQGQSAHMCANAGRKNIETRYKPSFVELEKAVEVLRQQPSSS 290
>gi|182412225|ref|YP_001817291.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177839439|gb|ACB73691.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 287
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 89/287 (31%), Positives = 143/287 (49%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG I IGGF GG+P +L+ E V++ G G V+A+P V+K
Sbjct: 1 MLILIGGLIVFASAIGGFMLAGGSPVLLLHASEFVVILGIAAGVLVIASPGHVLKHIVHK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + G+ + D+LKLLY + ++ E H+ +P S IF P+VL +
Sbjct: 61 VKGCIVSQNAGRQEFFDLLKLLYEIFMVGRRNGLIALEEHVMEPEKSVIFKRYPSVLNHA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ + ++ +I G + ++E LM+ EID E P H + +G+SLP IGIV A
Sbjct: 121 DRLEFLVNGLKPVIDGKIKPDQLEELMEAEIDAKSEEWDHPVHVLQLVGDSLPGIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ P+++G + +LTGTLLGI +Y NPL ++IK
Sbjct: 181 VLGIINTMAAIADGPEMVGKKVAAALTGTLLGIFFAYGFVNPLANRIKFNNAADLLCLRC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+ +A+ + G P A+E R+ L S +P + + K
Sbjct: 241 IMQAVAGFAKGLAPLTAVEIARRSLDSSVQPGANELEVALKALPPVK 287
>gi|165939049|ref|ZP_02227601.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
IP275]
gi|165913005|gb|EDR31630.1| chemotaxis protein MotA [Yersinia pestis biovar Orientalis str.
IP275]
Length = 288
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 81/282 (28%), Positives = 156/282 (55%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + + C+IGG+ GG+ QP EI+I+ G+G+G ++ NP V+++
Sbjct: 1 MQKLFGLLVIMGCVIGGYLMSGGSLSSFWQPGEIIIIFGSGIGALILGNPGSVLQEMWHQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L + + +L LLY L+ + +G + HI+ P NS++F P +L++
Sbjct: 61 ILAVARRSEYTVEFQQQLLLLLYELLEMVDEGGLKRLDEHIEIPANSSVFQRYPLILQDL 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI A
Sbjct: 121 HLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGICAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII M ++ S ++G + +L GT LG+ + Y L +PL++ ++ K+ L+
Sbjct: 181 VLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFEC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+ ++ G +A++ G K+LP+ +P+ + + +
Sbjct: 241 VRMVLVNHVAGKPSLLAVDAGHKMLPMDNKPTFATLDSWINK 282
>gi|54307285|ref|YP_128305.1| flagellar motor protein MotA [Photobacterium profundum SS9]
gi|46911705|emb|CAG18503.1| Hypothetical MotA flagellar motor transmembrane protein
[Photobacterium profundum SS9]
Length = 282
Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 144/268 (53%), Gaps = 1/268 (0%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
I+ G+ G L QP E +I+ GAG G V++NP V+K+ L +F K +
Sbjct: 13 SIVYGYTHASGRLLALWQPAEYIIILGAGFGAMVISNPTYVLKNILTRLKMMF-GKGYTE 71
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ VL+L++ L+ ++K + ++HI++P NS+IF P +N L +FI D +RM
Sbjct: 72 AYFKSVLELMFELLEIIRKDGIKKLDDHIENPQNSSIFNKYPEATRSNVLVSFITDNLRM 131
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ + +++E +++ E+ + + ++P A+ +GE++P GIV A+LGI+ M ++
Sbjct: 132 MAMSKMNHHDLEAVLELELHALEDDLMRPSKALGKVGEAMPGFGIVAAVLGIVVTMQSIG 191
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
++G + +L GT GI++ Y++ P+ + I + K+ +V L++ G
Sbjct: 192 GDLALIGVKVAAALVGTFFGILMCYAVFEPIAASIANQVKKEMMAMHMVSAILVSQAQGK 251
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+A++ GRKVL +PS + +
Sbjct: 252 PTLLALDAGRKVLHSEFKPSFATMENWM 279
>gi|45442812|ref|NP_994351.1| flagellar motor protein MotA [Yersinia pestis biovar Microtus str.
91001]
gi|45437678|gb|AAS63228.1| chemotaxis MotA protein [Yersinia pestis biovar Microtus str.
91001]
Length = 289
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 82/283 (28%), Positives = 157/283 (55%), Gaps = 1/283 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + + C+IGG+ GG+ QP EI+I+ G+G+G ++ NP V+++
Sbjct: 1 MQKLFGLLVIMGCVIGGYLMSGGSLSSFWQPGEIIIIFGSGIGALILGNPGSVLQEMWHQ 60
Query: 61 LLEIFGYKALG-QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+L + + +L LLY L+ + +G + HI+ P NS++F P +L++
Sbjct: 61 ILAVARRSEYTVEFQQQLLLLLLYELLEMVDEGGLKRLDEHIEIPANSSVFQRYPLILQD 120
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
L TFI D R++ +G +E+E+++++E+ + E L P + +GE++P GI
Sbjct: 121 LHLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQRIGEAMPGFGICA 180
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A+LGII M ++ S ++G + +L GT LG+ + Y L +PL++ ++ K+ L+
Sbjct: 181 AVLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFE 240
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V+ L+ ++ G +A++ GRK+LP+ +P+ + + +
Sbjct: 241 CVRMVLVNHVAGKPSLLAVDAGRKMLPMDNKPTFATLDSWINK 283
>gi|149191180|ref|ZP_01869438.1| MotA/TolQ/ExbB proton channel [Vibrio shilonii AK1]
gi|148835018|gb|EDL51997.1| MotA/TolQ/ExbB proton channel [Vibrio shilonii AK1]
Length = 288
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 130/286 (45%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +IG+ I + I GGF +GG + + EI+I+ GA +M+ +K
Sbjct: 1 MQKLIGIVIVLSVIFGGFIFLGGKFEFIFKLSEIIIIFGAAFASLLMSTTSATMKLMAQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +D Y +L L++ L+ + + + H+++P +S IF+ P + +
Sbjct: 61 VGIAFRSTPYNKDYYQQLLSLMFELINTARVQNIKALDIHVENPDSSKIFSKYPKITSDA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T FI D R +I G + +E ++EEI+ + E KP + E++P +GI+ A
Sbjct: 121 LTTQFIIDSFRQVITGKQSQHVLEAFLEEEIEHLEDEYTKPSEKLHATAEAMPGLGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L +G I +L GT G+ Y + P++S IK Q +
Sbjct: 181 VMGIILTMQGLDGEISEIGQNIAGALVGTFTGVFGCYCVLGPMSSSIKDVSENQLAPLLC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
VK L AY G + GRK + +PS + + V
Sbjct: 241 VKSILSAYAQGQSAHMCANAGRKNIETRYKPSFVELEKAVEVLRQQ 286
>gi|213417972|ref|ZP_03351052.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 209
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 76/209 (36%), Positives = 120/209 (57%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGMGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLPA GIV A
Sbjct: 121 VMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGT 209
++G++ A+ + + LG I ++ GT
Sbjct: 181 VMGVVHALASADRPAAELGALIAHAMVGT 209
>gi|168703395|ref|ZP_02735672.1| chemotaxis protein [Gemmata obscuriglobus UQM 2246]
Length = 281
Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 72/264 (27%), Positives = 129/264 (48%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
++ GF GG LI E V + GA LG +M +P+KVIKD L+ G+
Sbjct: 13 SVLVGFSMAGGKIGALIHLSEFVTIGGATLGSLIMMSPVKVIKDLIRGALQTVKGSPYGK 72
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
++LKL Y L +++ ++HI +P S + P + N+ F+CD + +
Sbjct: 73 AACVELLKLQYALARLVRQEGLLALDSHITNPDGSALLREYPKLNGNHHAREFLCDSLAL 132
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
I+ G S ++ ++EEI ++ E +S +SLP GIV A+LGI+ M +
Sbjct: 133 ILDGTVESSQLTEWLEEEIQVVEREHNAAVDTLSKTADSLPGFGIVAAVLGIVVTMQAIG 192
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +G +G +L GT LGI+ +Y P+ +++ + ++ + ++A +GA
Sbjct: 193 GPVEEIGYKVGAALVGTFLGILAAYGFVAPMAARMHALGDQEILFLKAMAVGVVAMNDGA 252
Query: 253 IPQVAIEYGRKVLPLSERPSIEIV 276
P+ + R+V+ RP+ +
Sbjct: 253 SPKDVVARARRVISTDCRPNQAEL 276
>gi|260768754|ref|ZP_05877688.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|260616784|gb|EEX41969.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
Length = 285
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 130/278 (46%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+ + ++ I F GG LI EI I+ G + G ++A+ +K
Sbjct: 1 MKQIVSFVVILIIIAVSFVLHGGRLGALISVAEIAIIFGCAICGMIIASKTATLKLMLQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y D+L L++ L+ K + + H+++P +S IF P++ +
Sbjct: 61 VKISLSKSTYDRQYYQDLLSLMFELINVAKMQNLKALDAHVENPESSNIFAKYPSITRDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI D R II ++++E ++EEI+ +L E KP + M E++P IGI+ A
Sbjct: 121 NTLKFIVDSFRQIISSKMSAHDVEAALEEEIEKLLEEYKKPSEKMHAMAEAMPGIGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L ++G +I +L GT GI Y L PL+ I+ +Q
Sbjct: 181 VMGIILTMQYLDAEVSVIGQSIAGALVGTFTGIFGCYCLFGPLSQAIQEVAEEQIAPLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
V+ + AY P + + GR+ + L +P+ + Q
Sbjct: 241 VRCIISAYCQNLSPHMCVNAGRRQIELHHKPTFTELEQ 278
>gi|315180457|gb|ADT87371.1| MotA/TolQ/ExbB proton channel [Vibrio furnissii NCTC 11218]
Length = 285
Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 129/278 (46%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+ + ++ I F GG LI EI I+ G + G ++A+ +K
Sbjct: 1 MKQIVSFVVILIIIAVSFVLHGGRLGALISVAEIAIIFGCAICGMIIASKTATLKLMLQQ 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y D+L L++ L+ K + + H+++P +S IF P + +
Sbjct: 61 VKISLSKSTYDRQYYQDLLSLMFELINVAKMQNLKALDAHVENPESSNIFAKYPAITRDE 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI D R II ++++E ++EEI+ +L E KP + M E++P IGI+ A
Sbjct: 121 NTLKFIVDSFRQIISSKMSAHDVEAALEEEIEKLLEEYKKPSEKMHAMAEAMPGIGILAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++GII M L ++G +I +L GT GI Y L PL+ I+ +Q
Sbjct: 181 VMGIILTMQYLDAEVSVIGQSIAGALVGTFTGIFGCYCLFGPLSQAIQEVAEEQIAPLQC 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
V+ + AY P + + GR+ + L +P+ + Q
Sbjct: 241 VRCIISAYCQNLSPHMCVNAGRRQIELHHKPTFTELEQ 278
>gi|89100892|ref|ZP_01173741.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
gi|89084379|gb|EAR63531.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
Length = 264
Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats.
Identities = 62/286 (21%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S++IG+ + I+ + G G +P L+ P I+I+ + +A P+ +K
Sbjct: 4 SSLIGVILAIIGVGVGMVLKGVHPSALVNPAAILIIIVGTIAAVTIAFPMNELKKVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETE---NHIDDPYNSTIFTSIPTVLE 118
+F + Q +++++ +K E N I+DP
Sbjct: 64 GILFKERK--QMVPAELIRMFSEWAQLARKEGLLALEAKTNEIEDP-------------- 107
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ + + + + G + Y I +++ EEI+ + L + G P +G++
Sbjct: 108 ------FLKNGLSLAVDGQSADY-IRDVLSEEIESMEERHLSGAAIFTQAGTYAPTLGVL 160
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I A+G+++ + LG AI + TLLGI Y L +P +++K ++ +L
Sbjct: 161 GAVVGLIAALGDMTNT-DALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQESKLK 219
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
++ + +++ + G P+V + LP ER EV
Sbjct: 220 YMMIEGVLSILEGEAPRVIEQKLASYLPSGERKQFLE-ESEVKANE 264
>gi|311067882|ref|YP_003972805.1| flagellar motor protein MotA [Bacillus atrophaeus 1942]
gi|310868399|gb|ADP31874.1| flagellar motor protein MotA [Bacillus atrophaeus 1942]
Length = 271
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 56/289 (19%), Positives = 119/289 (41%), Gaps = 21/289 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIG+ + + + G G + L P I+I+ + V+A P + IK
Sbjct: 4 TSIIGIILAFVALSVGMVMKGVSLSALANPAAILIIIFGTISAVVIAFPSREIKKVPTLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F Q T ++ + ++ E I++ +
Sbjct: 64 RVLFKENK--QLTVEQLIPMFSDWAQIARREGLLALEASIEEVDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M + G + + I ++M EE++ + + G P +G++GA+
Sbjct: 107 --AFLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEERHQTGASIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ ++ + LG AI + TLLGI Y L +P +++K ++ +L I+
Sbjct: 164 VGLIAALSHMDNT-DELGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+ +++ + G P+V + LP +R E ++ +
Sbjct: 223 IEGVLSVLEGQAPKVIEQKLLMYLPAKDRAKFAAQEGEAENGEKKEEEA 271
>gi|16078433|ref|NP_389252.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309233|ref|ZP_03591080.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313561|ref|ZP_03595366.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318483|ref|ZP_03599777.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322756|ref|ZP_03604050.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. SMY]
gi|127247|sp|P28611|MOTA_BACSU RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|143207|gb|AAA22602.1| motility protein A [Bacillus subtilis]
gi|2633740|emb|CAB13242.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus subtilis subsp. subtilis str. 168]
Length = 270
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 56/288 (19%), Positives = 120/288 (41%), Gaps = 21/288 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + L P I+I+ + V+A P K IK
Sbjct: 4 TSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKKVPTLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F Q T +++ + ++ E I+D +
Sbjct: 64 RVLFKENK--QLTIEELIPMFSEWAQLARREGLLALEASIEDVDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M + G + + I ++M EE++ + + G P +G++GA+
Sbjct: 107 --AFLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ ++ + LG AI + TLLGI Y L +P +++K ++ +L ++
Sbjct: 164 IGLIAALSHMDNT-DELGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREVM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+ +++ + G P+V + LP +R + ++A
Sbjct: 223 IEGVLSVLEGQAPKVIEQKLLMYLPAKDRLKFAEQGEAQNGEKKEEEA 270
>gi|296329694|ref|ZP_06872179.1| flagellar motor protein MotA [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674091|ref|YP_003865763.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153192|gb|EFG94056.1| flagellar motor protein MotA [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412335|gb|ADM37454.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 270
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 56/288 (19%), Positives = 121/288 (42%), Gaps = 21/288 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + L P I+I+ + V+A P K IK
Sbjct: 4 TSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKKVPALF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F Q T +++ + ++ E I+D +
Sbjct: 64 RVLFKENK--QLTIEELIPMFSEWAQLARREGLLALEASIEDVDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
TF+ + + M + G + + I ++M EE++ + + G P +G++GA+
Sbjct: 107 --TFLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ ++ + LG AI + TLLGI Y L +P +++K ++ +L ++
Sbjct: 164 IGLIAALSHMDNT-DELGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREVM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+ +++ + G P+V + +P +R + ++A
Sbjct: 223 IEGVLSVLEGQAPKVIEQKLLMYIPAKDRLKFAEQGEAQNGEKKEEEA 270
>gi|295399257|ref|ZP_06809239.1| MotA/TolQ/ExbB proton channel [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978723|gb|EFG54319.1| MotA/TolQ/ExbB proton channel [Geobacillus thermoglucosidasius
C56-YS93]
Length = 263
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 122/274 (44%), Gaps = 21/274 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIG+ + I+ + G Y G +P +LI P I+I+ + +A P + IK
Sbjct: 4 TSIIGIILGIVAVGVGMYLKGVHPSVLINPAAILIILVGTMASVTVAFPTREIKKVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + T +++ + ++ E +D+ +
Sbjct: 64 GVLFKEQNIP--TIEELIPMFVDWANIARREGLLALEAKLDEIDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M I G + + I ++M EEI+ + S G P +G++GA+
Sbjct: 107 --PFLRNGLSMAIDGQTQDF-IRDVMTEEIEAMEERHEANAAIFSQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ N+ + +G AI + TLLGI Y L +P ++++ ++ ++ ++
Sbjct: 164 IGLIAALSNM-DNISEIGKAISAAFVATLLGIFTGYVLWHPFANKLRRKSKEEAKIRQVM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ +++ + G P+ + LP +ER I
Sbjct: 223 IEGVLSILEGQAPRTIEQKLASYLPATERKKIIE 256
>gi|312110142|ref|YP_003988458.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y4.1MC1]
gi|311215243|gb|ADP73847.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y4.1MC1]
Length = 263
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 21/274 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIG+ + I+ + G Y G +P +LI P I+I+ + +A P + IK
Sbjct: 4 TSIIGIILGIVAVGVGMYLKGVHPSVLINPAAILIILVGTMASVTVAFPTREIKKVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + T ++ + ++ E +D+ +
Sbjct: 64 GVLFKEQNIP--TIEQLIPMFVDWANIARREGLLALEAKLDEIDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M I G + + I ++M EEI+ + S G P +G++GA+
Sbjct: 107 --PFLRNGLSMAIDGQTQDF-IRDVMTEEIEAMEERHEANAAIFSQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ N+ + +G AI + TLLGI Y L +P ++++ ++ ++ ++
Sbjct: 164 IGLIAALSNM-DNISEIGKAISAAFVATLLGIFTGYVLWHPFANKLRRKSKEEAKIRQVM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ +++ + G P+ + LP +ER I
Sbjct: 223 IEGVLSILEGQAPRTIEQKLASYLPATERKKIIE 256
>gi|114799859|ref|YP_762020.1| chemotaxis MotA protein [Hyphomonas neptunium ATCC 15444]
gi|114740033|gb|ABI78158.1| chemotaxis MotA protein [Hyphomonas neptunium ATCC 15444]
Length = 291
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 81/271 (29%), Positives = 137/271 (50%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL I ++ + GG GG + PFE+ ++ GA +G ++ N V +++
Sbjct: 1 MLQLAGLVIVLILVGGGLALTGGPAAMHALPFELALIGGAAIGTVMLGNSPAVAREALAG 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + Y D+ L LM +K+ E I+ P S +F + P +L +
Sbjct: 61 FVRAFQGSRWKKADYGDLFTLTGGLMRAVKRRGFVAIEADIEVPEESALFQAAPRILADA 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
T ICD R++ + + + M E ID +++K A+ + ++LPA+GIV A
Sbjct: 121 PARTLICDAFRLMALDLSDPQRADQRMMEAIDGHTAQRVKAVGALQTLADALPALGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LGII+ MG + Q P ILG IG +L GT LG+ L+Y L P+ ++ ++
Sbjct: 181 VLGIIRTMGAIDQEPAILGAMIGAALLGTFLGVFLAYGLVGPIAARYGQIVEEEAIFLET 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
++ + ++ GA P +AIE R LPL+ +P
Sbjct: 241 IRSVIRSFGEGAAPSLAIEMARTTLPLTLQP 271
>gi|321315124|ref|YP_004207411.1| flagellar motor protein MotA [Bacillus subtilis BSn5]
gi|320021398|gb|ADV96384.1| flagellar motor protein MotA [Bacillus subtilis BSn5]
Length = 270
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 56/288 (19%), Positives = 120/288 (41%), Gaps = 21/288 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + L P I+I+ + V+A P K IK
Sbjct: 4 TSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKKVPALF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F Q T +++ + ++ E I+D +
Sbjct: 64 RVLFKENK--QLTIEELIPMFSEWAQLARREGLLALEASIEDVDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M + G + + I ++M EE++ + + G P +G++GA+
Sbjct: 107 --AFLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ ++ + LG AI + TLLGI Y L +P +++K ++ +L ++
Sbjct: 164 IGLIAALSHMDNT-DELGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREVM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+ +++ + G P+V + LP +R + ++A
Sbjct: 223 IEGVLSVLEGQAPKVIEQKLLMYLPAKDRLKFAEQGEAQNGEKKEEEA 270
>gi|194014874|ref|ZP_03053491.1| chemotaxis protein MotA (Motility protein A) [Bacillus pumilus ATCC
7061]
gi|194013900|gb|EDW23465.1| chemotaxis protein MotA (Motility protein A) [Bacillus pumilus ATCC
7061]
Length = 264
Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats.
Identities = 61/278 (21%), Positives = 123/278 (44%), Gaps = 21/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + LI P I+I+ + V+A P IK +
Sbjct: 4 TSLIGIILAFIALSVGMVLKGVSLTALINPAAILIIVVGTIAAVVIAFPSSEIKKTPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+IF L T +++ L ++ E I++ +
Sbjct: 64 GKIFKDNKLP--TIQEMIPLFSNWAQIARREGLLALEASIEEVDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M + G + + I +++ EE+D + + G P +G++GA+
Sbjct: 107 --DFLKNGLSMAVDGQSAEF-IRDVLTEEVDAMSERHQSGALIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ N+ + LG AI + TLLGI Y L +P +++K ++ +L +I+
Sbjct: 164 VGLIAALANMGD-IEALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEVKLRLIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ +++ + G P+V + LP ER ++ I E
Sbjct: 223 IEGILSVLEGQSPKVIEQKLLMYLPAKERANLVIEEGE 260
>gi|222872324|gb|EEF09455.1| predicted protein [Populus trichocarpa]
Length = 190
Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 109/190 (57%)
Query: 95 NETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDII 154
E+ ++ P S IFT P +L ++ + F+ DY+RM++ GN S+EIE+LMD EI+
Sbjct: 1 MSIESDVEAPNESPIFTKYPELLADHHVVEFLTDYLRMMVSGNLNSHEIESLMDSEIEAH 60
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGII 214
E P +A++ + +LPA GI+ A+LG++ MG++ Q P +LG I +L GT LGI+
Sbjct: 61 HAEAHAPVNALTRLAGALPAFGIIAAVLGVVNTMGSVGQPPSVLGGMIASALVGTFLGIL 120
Query: 215 LSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
L+Y+L P+ ++ + +K L+A M G P AIE+GRKVL +ERP
Sbjct: 121 LAYALVEPMAGLVEQRAQDAAKELECIKTTLLASMQGYNPATAIEFGRKVLFSTERPGFL 180
Query: 275 IVAQEVLQYN 284
+ V
Sbjct: 181 ELETHVKGKK 190
>gi|297529304|ref|YP_003670579.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. C56-T3]
gi|297252556|gb|ADI26002.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. C56-T3]
Length = 263
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 121/269 (44%), Gaps = 21/269 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIG+ + ++ + G Y G +P +LI P I+I+ ++A P+K IK
Sbjct: 4 TSIIGIILGVIAVGLGMYFKGVSPAVLINPAAILIILVGTAAAVIIAFPMKEIKKVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF + +++ L ++ E ++D +
Sbjct: 64 KIIFTEPPTP--SIDELIPLFVDWANIARREGLLALEAKLNDIDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M I G + + I ++M EEI + + G P +G++GA+
Sbjct: 107 --PFLRNGLSMAIDGQTQEF-IRDVMTEEIVAMEERHEANAAIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GN+ + LG AI + T+LGI Y L +P ++++ ++ R+ I+
Sbjct: 164 VGLIAALGNM-DNISELGHAISAAFVATMLGIFTGYVLWHPFANKLRRKSKEEARVRYIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ + G P++ + LP SER
Sbjct: 223 VEGVLSILEGQAPRMIEQKLASYLPESER 251
>gi|157692041|ref|YP_001486503.1| flagellar motor protein MotA [Bacillus pumilus SAFR-032]
gi|157680799|gb|ABV61943.1| flagellar motor protein A [Bacillus pumilus SAFR-032]
Length = 264
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 61/278 (21%), Positives = 123/278 (44%), Gaps = 21/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + LI P I+I+ + V+A P IK +
Sbjct: 4 TSLIGIILAFIALSVGMVLKGVSLTALINPAAILIIVVGTIAAVVIAFPSSEIKKTPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+IF L T +++ L ++ E I++ +
Sbjct: 64 GKIFKDNKLP--TIQEMIPLFSNWAQIARREGLLALEASIEEVDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M + G + + I +++ EE+D + + G P +G++GA+
Sbjct: 107 --DFLKNGLSMAVDGQSAEF-IRDVLTEEVDAMAERHQSGALIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ N+ + LG AI + TLLGI Y L +P +++K ++ +L +I+
Sbjct: 164 VGLIAALANMGD-IEALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEVKLRLIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ +++ + G P+V + LP ER ++ I E
Sbjct: 223 IEGILSVLEGQSPKVIEQKLLMYLPAKERANLVIEEGE 260
>gi|261219995|ref|ZP_05934276.1| flagellar motor protein MotA [Brucella ceti B1/94]
gi|260918579|gb|EEX85232.1| flagellar motor protein MotA [Brucella ceti B1/94]
Length = 225
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 105/192 (54%), Positives = 136/192 (70%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+GL IT+ C++GGF AMGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G +
Sbjct: 34 LGIIVGLVITLGCMLGGFIAMGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRA 93
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+E F Q Y DVL +LY LM L+ SRNE E HID+P S IF + P+VL+
Sbjct: 94 CMEAFTDAVPKQRDYLDVLGVLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKE 153
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+LT FICDY R+IIVGN RSYEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A
Sbjct: 154 DLTNFICDYCRLIIVGNVRSYEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAA 213
Query: 181 ILGIIKAMGNLS 192
+LG+IKAMG L
Sbjct: 214 VLGVIKAMGALD 225
>gi|291483904|dbj|BAI84979.1| flagellar motor protein MotA [Bacillus subtilis subsp. natto
BEST195]
Length = 269
Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 55/286 (19%), Positives = 118/286 (41%), Gaps = 21/286 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G + L P I+I+ + V+A P K IK
Sbjct: 4 TSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKKVPALF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F Q T +++ + ++ E I+D +
Sbjct: 64 RVLFKENK--QLTIEELIPMFSEWAQLARREGLLALEASIEDVDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M + G + + I ++M EE++ + + G P +G++GA+
Sbjct: 107 --AFLKNGLSMAVDGQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ ++ + LG AI + TLLGI Y L +P +++K ++ +L ++
Sbjct: 164 IGLIAALSHMDNT-DELGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREVM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+ +++ + G P+V + LP +R + +
Sbjct: 223 IEGVLSVLEGQAPKVIEQKLLMYLPAKDRLKFAEQGEAQNGEKKEE 268
>gi|319653377|ref|ZP_08007477.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
gi|317394861|gb|EFV75599.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
Length = 264
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 119/274 (43%), Gaps = 21/274 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG+ + I+ + G G +P +LI P I+I+ +A P IK
Sbjct: 4 TTIIGVILGIIAVGVGMVFKGVSPSVLINPAAILIIILGTAAAVAIAFPTNEIKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + L +++K+ +K E ++ N
Sbjct: 64 GILFKEEKLM--NPAEMIKMFSDWAQLARKEGLLALEVKTNEIEN--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
TF+ + + + + G + Y I +++ EEI+ + S G P++G++GA+
Sbjct: 107 --TFLKNGLSLAVDGQSADY-IRDVLSEEIEAMEERHQAGAQIFSQAGTYAPSLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GN+ + LG AI + TLLGI Y +P +++K ++ ++ ++
Sbjct: 164 IGLIAALGNMEDT-TSLGHAISAAFVATLLGIFTGYVFWHPFANKLKRKSKQEAKIKSMM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ +++ + G P+V + LP ER
Sbjct: 223 IEGILSILEGEAPRVIEQKLASYLPAGERRKFLE 256
>gi|229543004|ref|ZP_04432064.1| MotA/TolQ/ExbB proton channel [Bacillus coagulans 36D1]
gi|229327424|gb|EEN93099.1| MotA/TolQ/ExbB proton channel [Bacillus coagulans 36D1]
Length = 267
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 121/269 (44%), Gaps = 21/269 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S+IIG+ + ++ I G G +P +L+ P ++I+ ++ P+ +K L
Sbjct: 4 SSIIGVILGVVAIGTGMVLKGVSPAVLVNPAALLIILAGTAASVIIGFPMSELKKVPKLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF + L ++++ ++ E +D+ +
Sbjct: 64 KIIFTEQKLMSTE--EMIRFFSDWAQTARREGLLALEARLDEVDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + + I G + Y I +++ EEI+ + S G P +G++GA+
Sbjct: 107 --AFLKNGLSLAIDGQSAEY-IRDVLSEEIEAMEERHQMGAAIFSQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I A+GN+S + ++LG AI + TLLGI Y L +P +++K + + I+
Sbjct: 164 LGLIAALGNMSDT-EVLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKNEAKNKEIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ + G P+V + LP ER
Sbjct: 223 LEGILSILAGESPRVIEQKLASYLPNEER 251
>gi|212638650|ref|YP_002315170.1| flagellar motor protein MotA [Anoxybacillus flavithermus WK1]
gi|212560130|gb|ACJ33185.1| Flagellar motor protein A [Anoxybacillus flavithermus WK1]
Length = 304
Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats.
Identities = 57/272 (20%), Positives = 120/272 (44%), Gaps = 21/272 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IGL + I+ + G G +P +LI P I+I+ +A P K I
Sbjct: 42 TSLIGLILGIIAVGVGMVFKGVSPSVLINPAAILIILLGTAAAVTIAFPTKEISKVPKLF 101
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF + +++ L ++ E + + +
Sbjct: 102 GVIFKEPKTPK--IEELIPLFVEWANIARREGLLALEAKVAEIDD--------------- 144
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + + I G ++ + I ++M EEI+ + L + G P +G++GA+
Sbjct: 145 --PFLRNGLSLAIDGQSQEF-IRDVMTEEIEAMEERHLANATIFTQAGTYAPTLGVLGAV 201
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ ++S + LG AI + TL+GI Y L +P +++K ++ ++ ++
Sbjct: 202 VGLIAALQDMSD-IERLGHAISAAFVATLMGIFTGYVLWHPFANKLKRKSKEEIKVRQVM 260
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ +++ + G P+ + LP+SER +
Sbjct: 261 IEGVLSIIEGQAPRAIEQKLASYLPMSERQKL 292
>gi|294498804|ref|YP_003562504.1| chemotaxis protein MotA [Bacillus megaterium QM B1551]
gi|295704126|ref|YP_003597201.1| chemotaxis protein MotA [Bacillus megaterium DSM 319]
gi|294348741|gb|ADE69070.1| chemotaxis protein MotA [Bacillus megaterium QM B1551]
gi|294801785|gb|ADF38851.1| chemotaxis protein MotA [Bacillus megaterium DSM 319]
Length = 264
Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 21/272 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++ IGL + I +I G + G NP +L P I+I+ +G V+A P IK
Sbjct: 4 TSFIGLILGIASLIVGMFFKGVNPSVLGNPAAILIIIVGTVGAVVIAFPSNEIKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + Q D++ + ++K E I D +
Sbjct: 64 GVLFKEQKMLQ--PVDLVSMFSEWGQVVRKEGLLSLEAQIIDVDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + + I G + Y I +++ EEID + + G P +G++GA+
Sbjct: 107 --PFLKNGLNLAIDGQSADY-IRDVLSEEIDAMEERHQTGASIFALAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GN+ + LG AI + TLLGI Y L +P +++K + ++ ++
Sbjct: 164 IGLIAALGNMEDT-DTLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKHEVKVKYMM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ +++ + G P+V + LP +ER +
Sbjct: 223 IEGVLSLLEGETPKVIEQKLASYLPTAERKKL 254
>gi|327398735|ref|YP_004339604.1| chemotaxis MotA protein [Hippea maritima DSM 10411]
gi|327181364|gb|AEA33545.1| chemotaxis MotA protein [Hippea maritima DSM 10411]
Length = 281
Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats.
Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 1/276 (0%)
Query: 6 GLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF 65
G+ +T+L ++G F GGNP +LIQ E +++ GA G + +K + +L I
Sbjct: 5 GIVLTLLAVVGAFVYEGGNPAVLIQIGEYIVLFGAFFGMLLSNASPSALKGAFGVILGIA 64
Query: 66 GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTF 125
+ Y ++LK++Y L ++K E +DDP +S I L+N E +
Sbjct: 65 KPDPYNKKNYLELLKIVYDLSTKVRKDGILSLEAVVDDPESSPILQDAAFFLKNKEARSL 124
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D +R I+ G ++E ++D I+ I E + P + + ES+P +GIV A++G+I
Sbjct: 125 LIDALRNIVTG-IEVEKLEEMLDTNIESIEKEAMAPAKMVGTLAESMPGMGIVAAVMGVI 183
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
MG L S ++G I +LTGT LG+++ Y + P+ + +K +
Sbjct: 184 LTMGALGGSILVIGEHIAAALTGTFLGLLMCYGIFGPMAKYAEFKTEDMVAYLNALKTGI 243
Query: 246 IAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
I G P +A+E R+ +P RP + V
Sbjct: 244 IYIAKGDAPIIAMEAVRESIPPLARPEFDEAESFVK 279
>gi|255021444|ref|ZP_05293491.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
gi|254969149|gb|EET26664.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
Length = 192
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 115/191 (60%)
Query: 95 NETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDII 154
E IDDP S +F P +L ++ + F+ DY+R++I GN +E+ENLMD +ID
Sbjct: 1 MSIEGDIDDPAASELFKKYPVLLADHSVLEFLTDYLRLMIGGNLGVFEMENLMDLDIDTH 60
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGII 214
E P HA++ + +PA GIV A++G++ M ++ + P +LG I +L GT LGI+
Sbjct: 61 HRELEVPVHALTRAADGMPAFGIVAAVMGVVHVMASVDKPPAVLGELIAAALVGTFLGIL 120
Query: 215 LSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
L Y++ +P+ S+I+ + ++ +K AL+A MN PQVA+E+GRKVL +ERPS +
Sbjct: 121 LGYAVVSPIASRIEDRVAEGTKMLECIKVALLATMNAYPPQVAVEFGRKVLFSTERPSFQ 180
Query: 275 IVAQEVLQYNH 285
+ + +
Sbjct: 181 ELDTHLREMKG 191
>gi|153956380|ref|YP_001397145.1| hypothetical protein CKL_3789 [Clostridium kluyveri DSM 555]
gi|219856693|ref|YP_002473815.1| hypothetical protein CKR_3350 [Clostridium kluyveri NBRC 12016]
gi|146349238|gb|EDK35774.1| MotA [Clostridium kluyveri DSM 555]
gi|219570417|dbj|BAH08401.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 264
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 110/277 (39%), Gaps = 20/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S I+ L +L + GGF GG+ L+ P +IV G +G ++ PL ++K
Sbjct: 3 ISVILFLIFGLLALGGGFILDGGHLSALLGPTAAMIVFGGTIGAVGVSFPLDLLKRIPKM 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + ++ + Y +K E I +
Sbjct: 63 VKVMISPP---KTELPSLISYFKDVSYRTRKNGLLSLEGEISS---------------DP 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI +++++ G + ++++ E++ + G P +GIVG
Sbjct: 105 NLDPFIKKGLQLVVDG-VDPQAVRSILELELESTSERHRQGAAVFQSAGGYSPTMGIVGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + P LG I V+ TL GI + + P+ +++ K+ + +
Sbjct: 164 VMGLVHVLGNL-EDPSTLGPKIAVAFLATLYGIGAANLIWLPIANRLNVLDDKEVKEKTL 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ + ++ G P E + L E E +
Sbjct: 223 IVEGILYIQEGINPNTIAEKLKSFLNKEELVRFEEMD 259
>gi|167463461|ref|ZP_02328550.1| MotA [Paenibacillus larvae subsp. larvae BRL-230010]
Length = 265
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 113/269 (42%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL I + +IGGF GG+ L+ P ++IV G +G V++ P V+K +
Sbjct: 3 LATLLGLIIGLGALIGGFLWDGGHLSSLVIPSAMLIVFGGTIGAVVVSFPGSVLKKIPKA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + + + ++ E
Sbjct: 63 LGIAFKPANTNP---IETIDDIVDMATIARREGVLALEQR-----------------AQE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ D + M++V +++ E+D I + G P +GI+G
Sbjct: 103 HPNEFLRDGL-MMVVDGTDPELTRQILELEMDSIEQQNEGMTKMFESAGGYSPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +GNL + P LG AI V+ T TL G++ + + P+ ++I+ +Q +
Sbjct: 162 VMGLIHVLGNL-EDPSALGPAIAVAFTATLYGVMAANVIYLPIGNKIRIRSKEQISQMEL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++A G PQ+ + L E
Sbjct: 221 MLEGILALQAGENPQLIKKKLTSFLNEKE 249
>gi|323703349|ref|ZP_08114999.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum nigrificans DSM
574]
gi|323531712|gb|EGB21601.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum nigrificans DSM
574]
Length = 259
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 113/279 (40%), Gaps = 24/279 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T G+ ++C++GGF GG P L+QP +IV G +G V+A +
Sbjct: 3 IMTPAGILFAVICLVGGFILEGGEPQALLQPTAFMIVFGGTIGATVVAFSTSEVLSLPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ K + + + L+ L ++ ++ +D +
Sbjct: 63 IKTAITKKLP---DFQETINLIVDLAEKARREGLLYLDSQLDTIDD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ M++++ G + ++++ EI + G P +GI+G
Sbjct: 106 ---PFLRKAMQLVVDGT-DPEMVRSILETEIYSAYERHQVGVNIFEAAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + NLS P LG AI ++ TL G+ + P+ ++K+ K+ L +
Sbjct: 162 VMGLVHVLANLSD-PDSLGPAIAMAFIATLYGVSSANIFWLPIGGKLKNLSKKELLLREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ + ++A G P + E + + P+ +E
Sbjct: 221 MIEGILALQAGYNPIIIRERLNAFIKPN--PNTAQTEEE 257
>gi|134300282|ref|YP_001113778.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum reducens MI-1]
gi|134052982|gb|ABO50953.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum reducens MI-1]
Length = 260
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 56/279 (20%), Positives = 113/279 (40%), Gaps = 24/279 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T G+ +C+I GF GG+ L+ P +IV G LG V+A K + +
Sbjct: 3 IMTPAGILFAAVCLISGFLLEGGHVSALLAPTAFIIVVGGTLGATVVAFSTKEVLSVPIL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L K + + + L+ L ++ ++ +D +
Sbjct: 63 LKTAMTKKVP---DFSETINLIVELAEKARREGLLYLDSQLDTIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ M++++ G + ++++ E+ H G P +GI+G
Sbjct: 106 ---PFLRKAMQLVVDGT-DPEMVRSILETEVYSAYERHQVGVHIFEGAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS P LG AI ++ TL G+ + P+ +++K+ K+ L +
Sbjct: 162 VMGLVHVLGNLSD-PDSLGPAIAMAFIATLYGVGSANVFWLPIGAKLKNLSKKELVLREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE--RPSIEIVA 277
+ + ++A G P + E + E +P +
Sbjct: 221 MIEGILALQAGYNPTIIRERLNAFIKPGESKQPQADEGE 259
>gi|301633049|ref|XP_002945590.1| PREDICTED: chemotaxis protein motA-like [Xenopus (Silurana)
tropicalis]
Length = 189
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 109/187 (58%)
Query: 95 NETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDII 154
E+ +++P S +FT P V ++ + FI DY+RM++ GN ++EIE+LMD EI+
Sbjct: 1 MAIESDVENPKESALFTKYPGVGSDHHVVEFITDYLRMMVSGNLNAHEIESLMDSEIETH 60
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGII 214
E P A++ + +LPA GIV A+LG++ MG++ Q P +LG I +L GT LGI+
Sbjct: 61 HQEAHAPVAALARLAGALPAFGIVAAVLGVVNTMGSVGQPPAVLGGMIASALVGTFLGIL 120
Query: 215 LSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
L+Y L P+ ++ + + +K L+A M G P AIE+GRKVL ++RP+
Sbjct: 121 LAYGLVEPIAGLLEQKAEDAAKEFQCIKSTLLASMQGYNPATAIEFGRKVLFSTDRPTFM 180
Query: 275 IVAQEVL 281
+ V
Sbjct: 181 ELESHVK 187
>gi|56421065|ref|YP_148383.1| flagellar motor protein MotA [Geobacillus kaustophilus HTA426]
gi|56380907|dbj|BAD76815.1| motility protein A (flagellar motor rotation) [Geobacillus
kaustophilus HTA426]
Length = 263
Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + ++ + G Y G +P +LI P I+I+ V+A P IK
Sbjct: 4 TSVIGIILGVIAVGLGMYFKGVSPAVLINPAAILIILVGTAAAVVIAFPTHEIKKVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF T ++ L ++ E +DD +
Sbjct: 64 KVIFTESTTP--TVEQLIPLFVDWANIARREGLLALEAKLDDIDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M I G + + I ++M EEI + S G P +G++GA+
Sbjct: 107 --PFLRNGLSMAIDGQTQEF-IRDVMTEEIVAMEERHEANAAIFSQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GN+ ++ LG AI + T+LGI Y L +P ++++ ++ R+ I+
Sbjct: 164 IGLIAALGNM-ENIAELGKAISAAFVATMLGIFTGYVLWHPFANKLRRKSKEEARVRYIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ + G P++ + LP +ER
Sbjct: 223 IEGVLSILEGQAPRMIEQKLASYLPENER 251
>gi|296134256|ref|YP_003641503.1| MotA/TolQ/ExbB proton channel [Thermincola sp. JR]
gi|296032834|gb|ADG83602.1| MotA/TolQ/ExbB proton channel [Thermincola potens JR]
Length = 257
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 112/271 (41%), Gaps = 22/271 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++I+G+ +L ++GGF A G+ L+ +IV G +G V + ++ IK
Sbjct: 3 LTSILGIIFGLLSLVGGFVAEKGHVSSLLAGSAALIVFGGTIGATVASFKMEDIKSIPAL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + +++ L ++ E + +
Sbjct: 63 LRIVFKEHKYEVN---ELIVTLVGFAEKARREGLLSLERETANIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G + + ++++ +I+ + G P +GI+G
Sbjct: 106 ---DFLRQGIQLVVDGTDPAL-VRDILETQIEFMDQRHKIGADIFESAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS P+ LG AI + TL G+ + L P+ ++K ++ + +
Sbjct: 162 VMGLVHVLGNLSD-PESLGPAIASAFIATLYGVSSANILWLPMGHKLKLKSKQERFIKEV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ +++ G P + E R L R
Sbjct: 221 ALEGILSIQAGDNPSIVGEKLRAFLSAKVRK 251
>gi|261418452|ref|YP_003252134.1| flagellar motor protein MotA [Geobacillus sp. Y412MC61]
gi|319767587|ref|YP_004133088.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y412MC52]
gi|261374909|gb|ACX77652.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y412MC61]
gi|317112453|gb|ADU94945.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y412MC52]
Length = 263
Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + ++ + G Y G +P +LI P I+I+ V+A P + IK
Sbjct: 4 TSVIGIILGVIAVGLGMYFKGVSPAVLINPAAILIILVGTAAAVVIAFPTQEIKKVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF T ++ L ++ E +DD +
Sbjct: 64 KVIFTESTTP--TVEQLIPLFVDWANIARREGLLALEAKLDDIDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M I G + + I ++M EEI + S G P +G++GA+
Sbjct: 107 --PFLRNGLSMAIDGQTQEF-IRDVMTEEIVAMEERHEANAAIFSQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GN+ ++ LG AI + T+LGI Y L +P ++++ ++ R+ I+
Sbjct: 164 IGLIAALGNM-ENIAELGKAISAAFVATMLGIFTGYVLWHPFANKLRRKSKEEARVRYIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ + G P++ + LP SER
Sbjct: 223 IEGVLSILEGQAPRMIEQKLASYLPESER 251
>gi|78043109|ref|YP_359810.1| chemotaxis motA protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77995224|gb|ABB14123.1| chemotaxis motA protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 267
Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats.
Identities = 55/290 (18%), Positives = 117/290 (40%), Gaps = 28/290 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++G+ I ++ GF GG L+ P +I+ G +G ++A + +
Sbjct: 3 IMVVLGVVIAFTSLVTGFLMEGGTISALVAPSAALIIFGGTIGASIIAFSTEEVLAIPKY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ K L + +V+K + L ++ EN + + +
Sbjct: 63 FKIMLFQKPLNE---LEVVKQIVSLAQKARREGLLALENDLPNIKD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++I+ G ++++ EI I G P +GI+G
Sbjct: 106 ---DFLRRGLQLIVDGT-DPELFRSILENEIYAIAERHRAGAEFFEAAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +G LS +P+ LG AI ++ T TL G+ + L P ++++K+ K+ + +
Sbjct: 162 VMGLVHVLGQLS-TPEKLGPAIAMAFTATLYGVSSANILWLPFSAKLKNLSKKELLVREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+ + L++ G P + E R L R Q + + +
Sbjct: 221 MLEGLVSLQEGHNPMLIEEKLRSFLKPKLR------EQSLREGKGELNEA 264
>gi|239827802|ref|YP_002950426.1| flagellar motor protein MotA [Geobacillus sp. WCH70]
gi|239808095|gb|ACS25160.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. WCH70]
Length = 263
Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 117/270 (43%), Gaps = 21/270 (7%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+ G Y G NP +LI P I+I+ + +A P + IK +F + +
Sbjct: 15 AVGVGMYFKGVNPSVLINPAAILIIIVGTIASVTIAFPTREIKKVPKLFGVLFKEQNIP- 73
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
T +++ L ++ E +D+ + F+ + + M
Sbjct: 74 -TIEELIPLFVDWANVARREGLLALEAKLDEIDD-----------------PFLRNGLSM 115
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
I G + + I ++M EEI+ + S G P +G++GA++G+I A+GN+
Sbjct: 116 AIDGQTQDF-IRDVMTEEIEAMEERHEANAAIFSQAGTYAPTLGVLGAVIGLISALGNI- 173
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ LG AI + TLLGI Y L +P ++++ ++ ++ ++ + +++ + G
Sbjct: 174 DNISELGKAISAAFVATLLGIFTGYVLWHPFANKLRRKSKEEAKIRRVMIEGVLSILEGQ 233
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
P+ + LP +ER I ++ +
Sbjct: 234 APRTIEQKLASYLPETERKKIVEQGEKRNE 263
>gi|148266089|ref|YP_001232795.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146399589|gb|ABQ28222.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
Length = 256
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 22/268 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + +IGG GG+ ++QP +IV G G ++ PLK I +
Sbjct: 3 IATIIGLVLGFGAVIGGQVLEGGHVSAILQPTAALIVLGGTFGATFVSFPLKNILQALKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ ++ V+K + ++ E
Sbjct: 63 SRKVLFPP---KEDPEGVIKNIINYAAKARRNGLISLEQE-----------------AQT 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F + +++ G ++ M+ E+ G P IGI+GA
Sbjct: 103 VKDSFTKKGISLVVDG-IDPQKLRETMEIELASFEEHAKASAEVFEAAGGFAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS S LG I V+ T+ G++ + +C P+++++K + +
Sbjct: 162 VLGLIHVMNNLSDS-SKLGAGIAVAFVATIYGLMTANIICIPISTKLKLRLKEAILQKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLS 268
V + LIA NG P + R +P
Sbjct: 221 VIEGLIAIQNGENPHFIEQKLRAYMPDD 248
>gi|134298232|ref|YP_001111728.1| flagellar motor protein MotA [Desulfotomaculum reducens MI-1]
gi|134050932|gb|ABO48903.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum reducens MI-1]
Length = 268
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 119/289 (41%), Gaps = 24/289 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
STIIGLF+ I I G G + L P I+I+ +A P+ +K L
Sbjct: 4 STIIGLFLGITAISVGMVLKGAHLSSLWNPAAIMIIFVGTAASLFIAFPMSELKKIPRLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
L +V+ L ++ E+ ++ +
Sbjct: 64 KITLQEPKLM--AKREVVNTFVALASTARREGLLSLESQLESIDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ M+MII G+ + ++ +M+EEI + G P +G++GA+
Sbjct: 107 --PYLRGGMQMIIDGSDAEF-VKFVMEEEIYATEERHRSGALIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GNLS + LG +I + TLLGI Y L +P+ +++K K+ + ++
Sbjct: 164 VGLIAALGNLSD-IEKLGHSIAAAFVATLLGIFSGYVLWHPIANKLKRISKKEMEIKQMI 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+ ++A G P + L SER S +E ++A+
Sbjct: 223 VEGVLAIQTGRSPIAIEQQLLVYLSPSERSS---SKEEAENDGKAQRAA 268
>gi|322421652|ref|YP_004200875.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
gi|320128039|gb|ADW15599.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
Length = 254
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 104/265 (39%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ + + + GG G + LIQP +IV G +++ P+ + +
Sbjct: 3 LSTIIGIALGLFAVFGGAALEGLHMSALIQPTAAMIVLGGTAAATIVSFPVPTLLAAVKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++F +D V+K + ++ E
Sbjct: 63 VKKVFMPP---KDDPEGVIKNIINYAAKARRNGLISLEQE-----------------AQT 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F + +++ G ++ M+ E+ G P IGI+GA
Sbjct: 103 VKDSFTKKGISLVVDG-IDPQKLRETMEIELSSFESHAKHSAEVFEAAGGFAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS P LG I V+ T+ G++ + C P +++K ++ +
Sbjct: 162 VLGLIHVMSNLSD-PSKLGGGIAVAFVATIYGLMTANIFCIPFGTKLKCRLKEELLQKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
V + LIA NG P + R L
Sbjct: 221 VIEGLIAIQNGENPHFIEQKLRAYL 245
>gi|222053742|ref|YP_002536104.1| MotA/TolQ/ExbB proton channel [Geobacter sp. FRC-32]
gi|221563031|gb|ACM19003.1| MotA/TolQ/ExbB proton channel [Geobacter sp. FRC-32]
Length = 256
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 22/267 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIGL + +IGG GG+ +IQP +IV G +G ++ PL I ++
Sbjct: 3 IASIIGLILGFGAVIGGQILEGGHVSAIIQPTAALIVLGGTIGATFVSFPLANILNALKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ +D V+K + ++ E
Sbjct: 63 ARKVLFPP---KDDPEAVIKNIINYAAKARRNGLISLEQE-----------------AQT 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F + +++ G ++ M+ E++ G P IGI+GA
Sbjct: 103 VKDSFTKKGISLVVDG-IDPQKLRETMEIELNSFEEHAKASAEVFEAAGGFAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS S LG I V+ T+ G++ + +C P+++++K + +
Sbjct: 162 VLGLIHVMNNLSDS-SKLGAGIAVAFVATIYGLMTANIICIPISTKLKLRLKEAILQKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPL 267
V + LIA NG P + R LP
Sbjct: 221 VIEGLIAIQNGENPHFIEQKLRAYLPE 247
>gi|154685778|ref|YP_001420939.1| flagellar motor protein MotA [Bacillus amyloliquefaciens FZB42]
gi|154351629|gb|ABS73708.1| MotA [Bacillus amyloliquefaciens FZB42]
Length = 271
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 21/275 (7%)
Query: 16 GGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
G G + L P I+I+ + ++A P K IK +F Q T
Sbjct: 18 VGMVLKGVSLSALANPAAILIILFGTISAVIIAFPGKEIKKVPALFKVLFKENK--QLTI 75
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
++ + ++ E I+D + F+ + + M +
Sbjct: 76 AQLIPMFSQWAQIARREGLLALEASIEDVDD-----------------AFLKNGLSMAVD 118
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
G + + I ++M EE++ + + G P +G++GA++G+I A+ N++ +
Sbjct: 119 GQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIGLIAALSNMNNT- 176
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ LG AI + TLLGI Y L +P +++K ++ +L I+ + +++ + G P+
Sbjct: 177 EALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREIMIEGVLSVLEGQAPK 236
Query: 256 VAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V + LP +ER + E ++ +
Sbjct: 237 VIEQKLLMYLPANERAKVAEQEGEANNGEKKEEEA 271
>gi|296135639|ref|YP_003642881.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|295795761|gb|ADG30551.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 247
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 22/264 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++IG+ + + I+ G GG+ +IQ +IV G G ++ PLKV S
Sbjct: 3 ILSVIGVVVALGSILLGQLLEGGHISSIIQGTAFLIVIGGTTGATMLQFPLKVFIRSLKM 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L I + + +K + +K E I+
Sbjct: 63 LPWIVLPP---KGDPQETIKQILEWSDTARKNGLLALEAMIES----------------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G +I + +++EI + + + G P +GI+GA
Sbjct: 103 VPDPFVKKGLQMLVDGT-DPEKIRSTLEQEIGAVEHHDNQAAKVYESSGGYAPTVGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NL+ P LG I V+ T+ G+ + P+ +++KS + +L +
Sbjct: 162 VLGLIHVMENLAD-PSKLGGGIAVAFVATVYGVGSANLFFLPVANKLKSIVHNRAKLQEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
L+A G P++ +
Sbjct: 221 QVDGLVAIAEGENPRIIEGRLQSY 244
>gi|196248996|ref|ZP_03147696.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. G11MC16]
gi|196211872|gb|EDY06631.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. G11MC16]
Length = 263
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 121/269 (44%), Gaps = 21/269 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++++G+ + ++ + G Y G +LI P ++I+ + +A P + IK L
Sbjct: 4 TSVVGVILGVIAVGLGMYFKGVALSVLINPAALLIIFVGTVAAVTIAFPTREIKKVPKLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF A+ T ++ + ++ E +DD +
Sbjct: 64 KIIFTEPAIP--TVEQLIPMFVDWANIARREGLLALEAKLDDIDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M I G + + I ++M EEI + +H G P +G++GA+
Sbjct: 107 --PFLRNGLSMAIDGQTQEF-IRDVMTEEIAAMEERHEANAAIFTHAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GN+ ++ LG AI + TLLGI Y L +P ++++ ++ ++ I+
Sbjct: 164 IGLIAALGNM-ENIAELGQAISAAFVATLLGIFSGYVLWHPFANKLRRKSKEEAKVRYIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ + G P++ + L SER
Sbjct: 223 IEGVLSILEGQAPRMIEQKLASYLSESER 251
>gi|82940567|emb|CAJ44295.1| putative Chemotaxis Motility protein A (MotA) [Rhizobium
leguminosarum bv. viciae]
Length = 177
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 108/177 (61%), Positives = 143/177 (80%)
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
PTVL+N ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYH+I M +S P
Sbjct: 1 PTVLKNKELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHSIQIMSDSFP 60
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
AIGIV A+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R K
Sbjct: 61 AIGIVAAVLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNK 120
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
QHRLY+IVK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 121 QHRLYVIVKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 177
>gi|197120113|ref|YP_002140540.1| chemotaxis protein MotA [Geobacter bemidjiensis Bem]
gi|197089473|gb|ACH40744.1| chemotaxis MotA protein [Geobacter bemidjiensis Bem]
Length = 254
Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ + I + GG G + L+QP +IV G +++ PL + +
Sbjct: 3 LSTIIGILLGIGAVFGGAALEGLHMSALMQPTAAIIVLGGTAAATIVSYPLPTLLTALKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++F + V+K + ++ E
Sbjct: 63 LKKVFMPPNEDPEG---VIKNIINYAAKARRNGLISLEQE-----------------AQT 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F + +++ G ++ M+ E+ G P IGI+GA
Sbjct: 103 VKDSFTKKGISLVVDG-IDPQKLRETMEIELGSFEAHAKGSAEVFESAGGFAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS P LG I V+ T+ G++ + C P +++K ++ +
Sbjct: 162 VLGLIHVMSNLSD-PSKLGGGIAVAFVATIYGLMTANIFCIPFGTKLKHRLKEELLQKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
V + LIA NG P + R L
Sbjct: 221 VIEGLIAIQNGENPHFIEQKLRAYL 245
>gi|138896103|ref|YP_001126556.1| flagellar motor protein MotA [Geobacillus thermodenitrificans
NG80-2]
gi|134267616|gb|ABO67811.1| Motility protein A [Geobacillus thermodenitrificans NG80-2]
Length = 263
Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 121/269 (44%), Gaps = 21/269 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++++G+ + ++ + G Y G +LI P ++I+ + +A P + IK L
Sbjct: 4 TSVVGVILGVIAVGLGMYFKGVALSVLINPAALLIIFVGTVAAVTIAFPTREIKKVPKLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF A+ T ++ + ++ E +DD +
Sbjct: 64 KIIFTEPAIP--TVEQLIPMFVDWANIARREGLLALEAKLDDIDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M I G + + I ++M EEI + +H G P +G++GA+
Sbjct: 107 --PFLRNGLSMAIDGQTQEF-IRDVMTEEIAAMEERHEANAAIFTHAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GN+ ++ LG AI + TLLGI Y L +P ++++ ++ ++ I+
Sbjct: 164 IGLIAALGNM-ENIGELGQAISAAFVATLLGIFSGYVLWHPFANKLRRKSKEEAKVRYIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ + G P++ + L SER
Sbjct: 223 IEGVLSILEGQAPRMIEQKLASYLSESER 251
>gi|308173339|ref|YP_003920044.1| motility protein MotA [Bacillus amyloliquefaciens DSM 7]
gi|307606203|emb|CBI42574.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus amyloliquefaciens DSM 7]
gi|328553735|gb|AEB24227.1| flagellar motor protein MotA [Bacillus amyloliquefaciens TA208]
gi|328911415|gb|AEB63011.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus amyloliquefaciens LL3]
Length = 271
Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 21/275 (7%)
Query: 16 GGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
G G + L P I+I+ + ++A P K IK +F Q T
Sbjct: 18 VGMVLKGVSLSALANPAAILIILFGTISAVIIAFPGKEIKKVPALFKVLFKENK--QLTI 75
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
++ + ++ E I+D + F+ + + M +
Sbjct: 76 AQLIPMFSQWAQIARREGLLALEASIEDVDD-----------------AFLKNGLSMAVD 118
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
G + + I ++M EE++ + + G P +G++GA++G+I A+ N++ +
Sbjct: 119 GQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIGLIAALSNMNNT- 176
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ LG AI + TLLGI Y L +P +++K ++ +L I+ + +++ + G P+
Sbjct: 177 EALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREIMIEGVLSVLEGQAPK 236
Query: 256 VAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V + LP +ER + E ++ +
Sbjct: 237 VIEQKLLMYLPANERAKVIEQEGEANNGEKKEEEA 271
>gi|221635438|ref|YP_002523314.1| chemotaxis protein PomA [Thermomicrobium roseum DSM 5159]
gi|221157783|gb|ACM06901.1| chemotaxis protein PomA [Thermomicrobium roseum DSM 5159]
Length = 267
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 113/273 (41%), Gaps = 26/273 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ + +I F GG+ LI +I+ G G + + LK +
Sbjct: 3 LATILGIVLGFGALILAFVMEGGHLSSLIGITAYMIIFGGTFGATLTSYGLKDMLGLPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH-IDDPYNSTIFTSIPTVLEN 119
+++ D +++ + L ++ ENH I+DP
Sbjct: 63 IMKAIKTP---PDRRAVLVEEIVKLAEIARRDGLLALENHPIEDP--------------- 104
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + M++V + E ++ +++ + + Y MG P +GI+G
Sbjct: 105 -----FLKKGI-MLVVDGTDAELTEQILWADVEAMEQRHARGYGIFQTMGGFAPTMGIIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + +L P+ LG AI V+ TL G+ + L PL +++K ++
Sbjct: 159 TVMGLVHVLSSLKD-PESLGPAIAVAFLATLYGVATANLLWLPLHNKLKLRSKEEVAERQ 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ + ++ G P++ E LP R +
Sbjct: 218 LIIEGILGIQAGENPRMLREKLLVHLPPQARAT 250
>gi|320354971|ref|YP_004196310.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
gi|320123473|gb|ADW19019.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
Length = 261
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 108/281 (38%), Gaps = 25/281 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + + ++GG G + L+QP +IV G G ++ PL + +
Sbjct: 3 IATLIGLVLGLGAVVGGAALEGLHLNALVQPTAALIVLGGTFGAAFVSFPLPTVLRAFKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ D D+ +K E +
Sbjct: 63 VKKLLAGSPKNDDIIADICAF----AAKARKNGIIALEQD-----------------AKS 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + + + G EI L++ ++ + G P IGI+GA
Sbjct: 102 HKDRFMKKAISLSVDG-IDPKEIRELLEIDMSATEEQAKMSAEFFEAAGGYAPTIGIIGA 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS + LG I V+ T+ G+I + LC P ++IK + +
Sbjct: 161 VLGLIHVMSNLSDT-SKLGAGIAVAFVATIYGLITANILCLPAATKIKLRIKDEMVRKEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL--PLSERPSIEIVAQE 279
+ ++A NG P+ E R L ++PS +
Sbjct: 220 IIAGVVAIQNGENPRFIEERLRSYLGGEGDDKPSAVAEEEA 260
>gi|294339808|emb|CAZ88171.1| Motility protein A [Thiomonas sp. 3As]
Length = 247
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 22/264 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ TI+G+ + + I+ G GG+ +IQ +IV G G ++ PLKV S
Sbjct: 3 ILTIVGVVVALGSILLGQMLEGGHISSIIQGTAFLIVMGGTTGAVMLQFPLKVFIRSLKM 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + + +K + +K E I+
Sbjct: 63 LPWMVLPP---KGDPQETIKQILEWSDTARKNGLLALEAMIES----------------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G +I + +++EI + + + G P +GI+GA
Sbjct: 103 VPDPFVKKGLQMLVDGT-DPEKIRSTLEQEIGAVEHHDTQAAKVYESSGGYSPTVGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NL+ P LG I V+ T+ G+ + P+ +++KS + +L +
Sbjct: 162 VLGLIHVMENLAD-PSKLGGGIAVAFVATVYGVGAANLFFLPVANKLKSIVHNRAKLQEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
L+A G P++ +
Sbjct: 221 QVDGLVAIAEGENPRIIEGRLQSY 244
>gi|310659035|ref|YP_003936756.1| ytxd [Clostridium sticklandii DSM 519]
gi|308825813|emb|CBH21851.1| YtxD [Clostridium sticklandii]
Length = 260
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 111/270 (41%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ ++ II G + + P I+IV G L ++A P+ +KD
Sbjct: 3 LSTIIGIVSGLILIIVSIMLNG-SIGAFLDPASIMIVVGGTLAATLVAFPIPQVKDIIKL 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + ++ + L +K E + +
Sbjct: 62 TQKTFANRDSNPSK---IINDIITLANKARKEGLLSLEEATEALDD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++V + NL++ E+D I M + P G++G
Sbjct: 105 ---EFLKKGL-MLVVDGTDPELVRNLLETELDFIEQRHKAGQGLFESMATAAPGFGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +G+L P +G ++ V+L TL G +++ P+ +++K ++ I
Sbjct: 161 LIGLINMLGSLDD-PSTIGPSMSVALITTLYGSLIANLFFTPMANKLKVKSGEEILEREI 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + L++ G P++ E + LP S R
Sbjct: 220 MVEGLLSIQAGENPRIIEEKLKAFLPPSMR 249
>gi|327438678|dbj|BAK15043.1| flagellar motor component [Solibacillus silvestris StLB046]
Length = 266
Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S+++G+ I + ++ G + G P +LI P I+I+ + +A P+K +K
Sbjct: 3 ISSVVGVIIAFIALLVGMFLKGVTPEVLINPAAILIIIFGTIAAVTIAFPMKELKRVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN---HIDDPYNSTIFTSIPTVL 117
+F L D D++K+ ++ E+ ++DP
Sbjct: 63 FKILFSETKLASD--IDLIKMFSQWADLARREGLLALESKAAEVEDP------------- 107
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F+ + + + I G Y I +++ EE++ + S G P +G+
Sbjct: 108 -------FLKNGLTLAIDGQNADY-IRDVLTEEVEAMEDRHASGAGIFSQAGTYAPTLGV 159
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+GA++G+I A+ ++S LG AI + TLLGI Y L +P +++K + +
Sbjct: 160 LGAVVGLIAALKDMSD-IDKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSAVEVKQ 218
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++ + +++ + G P+V + L + ER I
Sbjct: 219 KQMMIEGILSVLEGEAPRVIEQKLASYLTMEERKQITE 256
>gi|253702422|ref|YP_003023611.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M21]
gi|251777272|gb|ACT19853.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M21]
Length = 254
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 103/265 (38%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ + I + GG G + LIQP +IV G ++ PL + +
Sbjct: 3 LSTIIGILLGIGAVFGGAALEGLHMSALIQPTAAIIVLGGTAAATFVSYPLPTLLTAVKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++F + V+K + ++ E
Sbjct: 63 LRKVFIPPNEDPEG---VIKNIINYAAKARRNGLISLEQE-----------------AQT 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F + +++ G ++ M+ E+ G P IGI+GA
Sbjct: 103 VKDSFTKKGISLVVDG-IDPQKLRETMEIELGSFEAHAKGSAEVFESAGGFAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS P LG I V+ T+ G++++ C P +++K ++ +
Sbjct: 162 VLGLIHVMSNLSD-PSKLGGGIAVAFVATIYGLMVANIFCIPFGTKLKHRLKEELLQKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
V + LIA NG P + R L
Sbjct: 221 VIEGLIAIQNGENPHFIEQKLRAYL 245
>gi|300853353|ref|YP_003778337.1| chemotaxis protein [Clostridium ljungdahlii DSM 13528]
gi|300433468|gb|ADK13235.1| chemotaxis protein [Clostridium ljungdahlii DSM 13528]
Length = 264
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 20/265 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S +I I + GF GGNP L VIV G G ++ PL V+K
Sbjct: 3 ISVVIFTIFGIAAVTAGFVMDGGNPTALFGGAAAVIVFGGTFGAVALSFPLDVLKRVPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
IF + + + D++ + Y +K E I + +
Sbjct: 63 FKVIFNPR---KASLVDLILYFKDVSYKTRKNGLLSLEGEISN---------------DP 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI +++++ G + ++++ E++ + G P +GI+G
Sbjct: 105 NLDPFIKKGLQLVVDG-VDPQAVRDILELELESTSERHKQGASVFESAGGYGPTMGIIGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +G+L+ + LG IG + TL GI + L PL +++K K+ + +
Sbjct: 164 VMGMVHILGSLTDTAS-LGGKIGSAFLATLYGIGSANLLWLPLGNRLKQQDEKEVKEKTL 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ +A++ G P E + L
Sbjct: 223 IIEAILYIQEGINPNTIAEKLKGFL 247
>gi|299535179|ref|ZP_07048503.1| chemotaxis protein motA [Lysinibacillus fusiformis ZC1]
gi|298729300|gb|EFI69851.1| chemotaxis protein motA [Lysinibacillus fusiformis ZC1]
Length = 267
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S+IIGL + ++ ++ G G + P I+I+ + +A P++ +K
Sbjct: 4 SSIIGLILALVALLTGMVMKGVSLSAFYNPAAILIIIFGTISAVTIAFPMQELKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN---HIDDPYNSTIFTSIPTVLE 118
+F L D +++K+ ++ E+ I+DP
Sbjct: 64 KILFKETKLAND--IEIIKMFSQWADLARREGLLALESKASEIEDP-------------- 107
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ + + + I G Y I +++ EE++ + + G P +G++
Sbjct: 108 ------FLKNGLTLAIDGQNADY-IRDVLTEEVEAMEERHTSGAAIFTQAGTYAPTLGVL 160
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I A+ +++ + LG AI + TLLGI Y L +P +++K + +
Sbjct: 161 GAVVGLIAALADMND-IEKLGHAISAAFMATLLGIFTGYVLWHPFANKLKRKSALEVKQK 219
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ + +++ + G P+V + L + ER I
Sbjct: 220 RMMIEGILSVLEGEAPRVIEQKLSSYLTMEERRQIS 255
>gi|257095367|ref|YP_003169008.1| flagellar motor protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257047891|gb|ACV37079.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 241
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 105/263 (39%), Gaps = 22/263 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++GL I L I+GG GG+ L QP ++IV G LG ++ +P +
Sbjct: 1 MLGLLIGFLAIVGGQLLEGGHVGSLSQPTALLIVVGGTLGAVMLQSPYATFVRGMRMVKW 60
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
++ + +++ + ++ + + N
Sbjct: 61 VWYPPVVNH---LQLIQQVSSWSQVSRREGLLALDAIV-----------------NELKD 100
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
FI +++++ G A + +++ EI E G P IGI+GA++G
Sbjct: 101 EFIRKGLQLLVDG-AEPERLREVLEVEISTFEEEMKLSARIWEAAGGYSPTIGILGAVMG 159
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I M NLS P LG I V+ T+ G+ L+ + P+ +++K+ + ++
Sbjct: 160 LIHVMENLSD-PSKLGAGIAVAFVATIYGVGLANLVYLPMANKLKTHINRLVVQREMIVD 218
Query: 244 ALIAYMNGAIPQVAIEYGRKVLP 266
L+ NG P++ R +
Sbjct: 219 GLVGIANGDNPRIIESRLRGYIF 241
>gi|16802727|ref|NP_464212.1| flagellar motor protein MotA [Listeria monocytogenes EGD-e]
gi|46906936|ref|YP_013325.1| flagellar motor protein MotA [Listeria monocytogenes serotype 4b
str. F2365]
gi|47095251|ref|ZP_00232862.1| chemotaxis protein MotA [Listeria monocytogenes str. 1/2a F6854]
gi|224498767|ref|ZP_03667116.1| flagellar motor protein MotA [Listeria monocytogenes Finland 1988]
gi|224502010|ref|ZP_03670317.1| flagellar motor protein MotA [Listeria monocytogenes FSL R2-561]
gi|226223316|ref|YP_002757423.1| motility protein (flagellar motor rotation) MotA [Listeria
monocytogenes Clip81459]
gi|254829342|ref|ZP_05234029.1| motility protein [Listeria monocytogenes FSL N3-165]
gi|254830324|ref|ZP_05234979.1| flagellar motor protein MotA [Listeria monocytogenes 10403S]
gi|254853111|ref|ZP_05242459.1| motility protein [Listeria monocytogenes FSL R2-503]
gi|254900079|ref|ZP_05260003.1| flagellar motor protein MotA [Listeria monocytogenes J0161]
gi|254911368|ref|ZP_05261380.1| flagellar motor protein MotA [Listeria monocytogenes J2818]
gi|254935695|ref|ZP_05267392.1| motility protein [Listeria monocytogenes F6900]
gi|254993371|ref|ZP_05275561.1| flagellar motor protein MotA [Listeria monocytogenes FSL J2-064]
gi|255026596|ref|ZP_05298582.1| flagellar motor protein MotA [Listeria monocytogenes FSL J2-003]
gi|255028360|ref|ZP_05300311.1| flagellar motor protein MotA [Listeria monocytogenes LO28]
gi|284801015|ref|YP_003412880.1| flagellar motor protein MotA [Listeria monocytogenes 08-5578]
gi|284994157|ref|YP_003415925.1| flagellar motor protein MotA [Listeria monocytogenes 08-5923]
gi|300764497|ref|ZP_07074490.1| chemotaxis protein MotA [Listeria monocytogenes FSL N1-017]
gi|5305455|gb|AAD41659.1| motility protein [Listeria monocytogenes]
gi|16410074|emb|CAC98763.1| lmo0685 [Listeria monocytogenes EGD-e]
gi|46880202|gb|AAT03502.1| chemotaxis protein MotA [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016322|gb|EAL07244.1| chemotaxis protein MotA [Listeria monocytogenes str. 1/2a F6854]
gi|225875778|emb|CAS04481.1| Putative motility protein (flagellar motor rotation) MotA [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601754|gb|EEW15079.1| motility protein [Listeria monocytogenes FSL N3-165]
gi|258606461|gb|EEW19069.1| motility protein [Listeria monocytogenes FSL R2-503]
gi|258608277|gb|EEW20885.1| motility protein [Listeria monocytogenes F6900]
gi|284056577|gb|ADB67518.1| flagellar motor protein MotA [Listeria monocytogenes 08-5578]
gi|284059624|gb|ADB70563.1| flagellar motor protein MotA [Listeria monocytogenes 08-5923]
gi|293589304|gb|EFF97638.1| flagellar motor protein MotA [Listeria monocytogenes J2818]
gi|300514851|gb|EFK41905.1| chemotaxis protein MotA [Listeria monocytogenes FSL N1-017]
Length = 283
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 113/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + DVL +++ E+ +D+ +
Sbjct: 63 FKILFTKEKMP--DKVDVLVQYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|261403962|ref|YP_003240203.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
gi|329930229|ref|ZP_08283842.1| chemotaxis protein MotA [Paenibacillus sp. HGF5]
gi|261280425|gb|ACX62396.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
gi|328935251|gb|EGG31732.1| chemotaxis protein MotA [Paenibacillus sp. HGF5]
Length = 266
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 119/277 (42%), Gaps = 21/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIGL I I+ ++ G G + L P +I+ G + PL +K
Sbjct: 3 ISTIIGLIIGIVAVLVGMILKGASLLALYNPAAYLIILGGTAATLFIGFPLSELKKIPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F D++KL ++ E +D+ +S
Sbjct: 63 VKMTFV--KQNLMDKTDMIKLFMEWASITRREGLLALETKVDEIDDS------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + MRMII GN + + + +++ E+I+ S G P++G++GA
Sbjct: 108 ----FLRNGMRMIIDGNDQEF-VRDVLMEDINATEERHRSGSLIFSQAGMYAPSLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+ ++ + L AIG + TLLGI Y +C+P+ +++K ++ + ++
Sbjct: 163 VIGLIAALSHMEDMGE-LAHAIGAAFIATLLGIFTGYVICHPIANKLKRLSKREVEIRLM 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ + L++ +G + L SER +
Sbjct: 222 MVEGLLSIQSGVSTIAINQKLSVFLTPSERAELSERE 258
>gi|116872074|ref|YP_848855.1| flagellar motor protein MotA [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740952|emb|CAK20072.1| chemotaxis (flagellar motor rotation) protein MotA [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 279
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + DVL +++ E+ +D+ +
Sbjct: 63 FKILFTKEKMP--DKVDVLVQYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|290893980|ref|ZP_06556955.1| motility protein [Listeria monocytogenes FSL J2-071]
gi|315281339|ref|ZP_07869985.1| chemotaxis protein MotA [Listeria marthii FSL S4-120]
gi|290556426|gb|EFD89965.1| motility protein [Listeria monocytogenes FSL J2-071]
gi|313615015|gb|EFR88513.1| chemotaxis protein MotA [Listeria marthii FSL S4-120]
Length = 283
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + DVL +++ E+ +D+ +
Sbjct: 63 FKILFTKEKMP--DKVDVLVQYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|39998118|ref|NP_954069.1| chemotaxis MotA protein [Geobacter sulfurreducens PCA]
gi|39985063|gb|AAR36419.1| chemotaxis MotA protein [Geobacter sulfurreducens PCA]
gi|298507056|gb|ADI85779.1| chemotaxis MotA protein [Geobacter sulfurreducens KN400]
Length = 254
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 22/267 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + + GG G + LIQP +IV G G ++ P+K I +
Sbjct: 3 IATIIGLVMGFGAVFGGALLEGLHLTALIQPTAAIIVLGGTFGAAFVSFPMKTIIGAAKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ Q+ V+K L ++ E N
Sbjct: 63 IKKVLM---PAQNDPEKVIKDLIGYAAKARRNGLISLEQE-----------------AQN 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + +++ G ++ ++ E+ + G P IGI+GA
Sbjct: 103 VKDPFTKKGISLVVDG-IDPQKLRETLEIEVTYYEEHAKQSAEFFEAAGGYAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I MGNLS S LG I V+ T+ G++ + +C P ++IK ++ +
Sbjct: 162 VLGLIHVMGNLSDS-SKLGAGIAVAFVATIYGLMTANIICLPFGTKIKHGIKEELICKNM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPL 267
+ + LIA NG P + + L
Sbjct: 221 IIEGLIAIQNGENPHFIEQKLKAFLQH 247
>gi|126649534|ref|ZP_01721775.1| flagellar motor protein MotA [Bacillus sp. B14905]
gi|126593859|gb|EAZ87782.1| flagellar motor protein MotA [Bacillus sp. B14905]
Length = 267
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 117/276 (42%), Gaps = 27/276 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S++IGL I + ++ G G + P I+I+ + +A P++ +K
Sbjct: 4 SSVIGLIIAFIALLTGMVMKGVSLTAFYNPAAILIIIFGTISAVTIAFPMQELKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN---HIDDPYNSTIFTSIPTVLE 118
+F L D +++K+ ++ E+ I+DP
Sbjct: 64 KILFKETKLAND--IEIIKMFSQWADLARREGLLALESKASEIEDP-------------- 107
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ + + + I G Y I +++ EE++ + + G P +G++
Sbjct: 108 ------FLKNGLTLAIDGQNADY-IRDVLTEEVEAMEERHASGSAIFTQAGTYAPTLGVL 160
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I A+ +++ + LG AI + TLLGI Y L +P +++K + +
Sbjct: 161 GAVVGLIAALADMND-IEKLGHAISAAFMATLLGIFTGYVLWHPFANKLKRKSALEVKQK 219
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ + +++ + G P+V + L + ER I
Sbjct: 220 RMMIEGILSVLEGEAPRVIEQKLSSYLTMEERRQIS 255
>gi|149183514|ref|ZP_01861941.1| flagellar motor protein MotA [Bacillus sp. SG-1]
gi|148848786|gb|EDL63009.1| flagellar motor protein MotA [Bacillus sp. SG-1]
Length = 266
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 60/289 (20%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + + + G G L+ I+I+ +G +A P IK
Sbjct: 4 TSLIGVILGVFAVGVGMVLKGVPVDKLMNLPAILIIIFGTIGAVTIAFPTSEIKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETE---NHIDDPYNSTIFTSIPTVLE 118
+F L +++ + ++ E + I+DP
Sbjct: 64 GVLFKENTL--QEPKELITMFSEWADLARREGLLALEAKTSGIEDP-------------- 107
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ + M + + G Y I ++++EEID + + G P +G++
Sbjct: 108 ------FLKNGMGLAVDGQNADY-IRDVLNEEIDAMEERHQAGALIFTQAGTYAPTLGVL 160
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA++G+I A+G + + LG AI + TLLGI Y L +P +++K ++ ++
Sbjct: 161 GAVVGLIAALGYM-EDISKLGEAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKIK 219
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+++ + +++ + G P+V + LP SER I + +EV++ +
Sbjct: 220 VMMIEGVLSIIEGEAPRVIEQKLASYLPASERKRI--MEEEVVKDDTAA 266
>gi|254824035|ref|ZP_05229036.1| flagellar motor protein MotA [Listeria monocytogenes FSL J1-194]
gi|254932035|ref|ZP_05265394.1| flagellar motor protein MotA [Listeria monocytogenes HPB2262]
gi|293583588|gb|EFF95620.1| flagellar motor protein MotA [Listeria monocytogenes HPB2262]
gi|293593264|gb|EFG01025.1| flagellar motor protein MotA [Listeria monocytogenes FSL J1-194]
gi|307570224|emb|CAR83403.1| chemotaxis protein [Listeria monocytogenes L99]
gi|328475648|gb|EGF46397.1| flagellar motor protein MotA [Listeria monocytogenes 220]
gi|332311110|gb|EGJ24205.1| Chemotaxis protein MotA [Listeria monocytogenes str. Scott A]
Length = 283
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + +VL +++ E+ +D+ +
Sbjct: 63 FKILFTKEKMP--DKVEVLVQYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|289433963|ref|YP_003463835.1| chemotaxis protein MotA [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170207|emb|CBH26747.1| chemotaxis protein MotA [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313634397|gb|EFS00986.1| chemotaxis protein MotA [Listeria seeligeri FSL N1-067]
Length = 283
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 111/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F DVL +++ E+ +D+ +
Sbjct: 63 FKILF--TKERGPDKVDVLIQYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVSSMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFICTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|328467254|gb|EGF38334.1| flagellar motor protein MotA [Listeria monocytogenes 1816]
Length = 283
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 114/270 (42%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L+ ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLLSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + +VL +++ E+ +D+ +
Sbjct: 63 FKILFTKEKMP--DKVEVLVQYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|16799768|ref|NP_470036.1| flagellar motor protein MotA [Listeria innocua Clip11262]
gi|16413145|emb|CAC95925.1| lin0693 [Listeria innocua Clip11262]
gi|313620084|gb|EFR91592.1| chemotaxis protein MotA [Listeria innocua FSL S4-378]
gi|313624927|gb|EFR94835.1| chemotaxis protein MotA [Listeria innocua FSL J1-023]
Length = 283
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 113/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + ++L +++ E+ +D+ +
Sbjct: 63 FKILFTKEKMP--DKVEILVQYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|326942296|gb|AEA18192.1| flagellar motor protein MotA [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 264
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATIIGLVLGFLAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|315301918|ref|ZP_07872929.1| chemotaxis protein MotA [Listeria ivanovii FSL F6-596]
gi|313629714|gb|EFR97836.1| chemotaxis protein MotA [Listeria ivanovii FSL F6-596]
Length = 283
Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 111/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F DVL +++ E+ +D+ +
Sbjct: 63 FKILF--TKERGPDKVDVLIQYKEYADEIRRSGVLALEDSVDEMED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVSSMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFICTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|313639079|gb|EFS04060.1| chemotaxis protein MotA [Listeria seeligeri FSL S4-171]
Length = 283
Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F DVL +++ E+ +D+ +
Sbjct: 63 FKILF--TKERGPDKVDVLIQYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G A + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQASPEFLRDVLEEEVSSMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFICTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|218899668|ref|YP_002448079.1| chemotaxis protein MotA [Bacillus cereus G9842]
gi|218543144|gb|ACK95538.1| chemotaxis protein MotA [Bacillus cereus G9842]
Length = 264
Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATIIGLILGFLAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|269836611|ref|YP_003318839.1| MotA/TolQ/ExbB proton channel [Sphaerobacter thermophilus DSM
20745]
gi|269785874|gb|ACZ38017.1| MotA/TolQ/ExbB proton channel [Sphaerobacter thermophilus DSM
20745]
Length = 268
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + + ++ F GG+ L+ +IV G G + ++ L K
Sbjct: 3 LATIIGLILGVAALVVAFILEGGHLTSLLGITAFMIVFGGTFGATIASHSLDDAKRIPSL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH-IDDPYNSTIFTSIPTVLEN 119
+L F + D L L ++ E+ IDDP
Sbjct: 63 ILRAFKAPPDRRRMLIDE---LVTLAEVARRDGLLALEDRVIDDP--------------- 104
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + +++ G +++ +I+ + + Y S MG P +GI+G
Sbjct: 105 -----FLQRAVTLVVDGT-DPEVTRAVLESDIEAMEARHARGYGMFSTMGGFAPTMGIIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+I + NLS SP LG AI V+ TL G+ + + P+ +++K ++
Sbjct: 159 TVMGLIHVLSNLS-SPDELGPAIAVAFLATLYGVASANLIWIPIGNKLKYRSQQEADERW 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPL 267
IV + ++ G P+V E LP
Sbjct: 218 IVVEGVMGLQAGDNPRVLREKLTATLPP 245
>gi|311031290|ref|ZP_07709380.1| flagellar motor protein MotP [Bacillus sp. m3-13]
Length = 271
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 117/286 (40%), Gaps = 24/286 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M T IGL + + I+ G G + +IV G LG ++ LK +K
Sbjct: 6 MLTPIGLILGLAMILFGIINNSGLSGASSFLHFPSFLIVIGGTLGALLITFNLKELKVMP 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F + ++ ++++ L ++ E ++D +
Sbjct: 66 TVIKAAF---SRQENELPNLIQTFVRLSDRARREGLLALEAELEDVED------------ 110
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
FI + ++ V I ++M+ EI + +K + G+ P+ G++
Sbjct: 111 -----DFIKKGV-LLAVDGVEPEVIHDIMNAEISAMEERHMKGRSILEKAGDYAPSWGMI 164
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ + NL+ P LG + +++ TL G +L+ + P+ S++ + K+ L
Sbjct: 165 GTLIGLVLMLKNLND-PTTLGPNMAIAILTTLYGTLLANLVFLPMASKLANKTEKEVFLK 223
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
I+ + +I +G P++ E L +R + E L+ N
Sbjct: 224 QIIIEGVIGVQSGQNPKILEEKLSAFLSNQDRERKDEAVAETLEEN 269
>gi|260892161|ref|YP_003238258.1| MotA/TolQ/ExbB proton channel [Ammonifex degensii KC4]
gi|260864302|gb|ACX51408.1| MotA/TolQ/ExbB proton channel [Ammonifex degensii KC4]
Length = 265
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 58/281 (20%), Positives = 122/281 (43%), Gaps = 24/281 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + I C++ GF GG L+ P +I+ G LG + I +
Sbjct: 3 IATLIGITVGIACLLLGFVLEGGTVAQLLAPSSFIIIFGGTLGATMAGFSFHEIAVVPKA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L IF ++ + + +++ L L ++ EN++ + +
Sbjct: 63 LRVIFFHRPIDERA---LIEQLVSLAEKARREGLLYLENYLKEIES-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G ++++M+ E+ + + G P +GI+G
Sbjct: 106 ---PFLRKGIQLVVDGT-EPELVKSIMETELYAMQERHRIAQEIFNQAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + +LS SP+ LG AI ++ T TL G+ + + P+ +++K+ K+ + I
Sbjct: 162 VMGLIHVLSHLS-SPEALGPAIAMAFTATLYGVSSANLIFYPIAARLKNLSAKEELAHRI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI--EIVAQE 279
+ + L+A G P + E L R E +
Sbjct: 221 MLEGLLALQAGNNPILIRERLTAFLSPKYRKQAGTEEGEEA 261
>gi|255099859|ref|ZP_05328836.1| putative chemotaxis protein [Clostridium difficile QCD-63q42]
gi|255305747|ref|ZP_05349919.1| putative chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 262
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 58/278 (20%), Positives = 115/278 (41%), Gaps = 22/278 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T+I + I ++ F GG+ L ++V G +G + P V K S
Sbjct: 1 MTTLIFFIVGIASLVVAFVIDGGHVGALFVFSSALVVFGGTIGAVGASTPFPVFKKSIKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L F K + + + +K + I EN+
Sbjct: 61 MLLAFKNKKPN---NIENIIYFKEIATKARKEGLLSIDKEI---------------SEND 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL FI + +++ G + I N+++ +I I + G P +GI+G
Sbjct: 103 ELDPFIRKGLELMVDG-VDAVTIRNILESQIQITSKRHKEGIAIFDSAGGYAPTLGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS +P LG I V+ TL G+ + + P+ S++K+ ++ ++
Sbjct: 162 VMGLVHILGNLSSNPDALGPQISVAFLATLYGVGSANLIWLPIASKLKAINQQEVSERLL 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
V +A+++ + G + E + L E + + +
Sbjct: 222 VIEAILSILEGDNSNLMTEKLKIFLNSKE---LIELEE 256
>gi|228941690|ref|ZP_04104237.1| hypothetical protein bthur0008_43260 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974616|ref|ZP_04135182.1| hypothetical protein bthur0003_43690 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981211|ref|ZP_04141511.1| hypothetical protein bthur0002_43720 [Bacillus thuringiensis Bt407]
gi|228778411|gb|EEM26678.1| hypothetical protein bthur0002_43720 [Bacillus thuringiensis Bt407]
gi|228785019|gb|EEM33032.1| hypothetical protein bthur0003_43690 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817902|gb|EEM63980.1| hypothetical protein bthur0008_43260 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 266
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLVLGFLAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|255654792|ref|ZP_05400201.1| putative chemotaxis protein [Clostridium difficile QCD-23m63]
gi|296449537|ref|ZP_06891314.1| chemotaxis MotA protein [Clostridium difficile NAP08]
gi|296878140|ref|ZP_06902155.1| chemotaxis MotA protein [Clostridium difficile NAP07]
gi|296261601|gb|EFH08419.1| chemotaxis MotA protein [Clostridium difficile NAP08]
gi|296430893|gb|EFH16725.1| chemotaxis MotA protein [Clostridium difficile NAP07]
Length = 262
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 19/276 (6%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T+I + I ++ F GG+ L ++V G +G + P V K S
Sbjct: 1 MTTLIFFIVGIASLVVAFVIDGGHVGALFVFSSALVVFGGTIGAVGASTPFPVFKKSIKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L F K + + + +K + I D NN
Sbjct: 61 MLLAFKNKKPN---NIENIIYFKEIATKARKEGLLSIDKEISD---------------NN 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL FI + +++ G + I ++++ +I I + G P +GI+G
Sbjct: 103 ELDPFIKKGLELMVDG-VDAVTIRSILESQIQITSKRHKEGIAIFDSAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS +P LG I V+ TL G+ + + P+ S++K+ ++ ++
Sbjct: 162 VMGLVHILGNLSSNPDALGPQISVAFLATLYGVGSANLIWLPIASKLKAINQQEISERLL 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V +A+++ + G + E + L E +E +
Sbjct: 222 VIEAILSILEGDNSNLMTEKLKIFLNSKELIELEEI 257
>gi|148359325|ref|YP_001250532.1| flagellar motor protein MotA [Legionella pneumophila str. Corby]
gi|296107372|ref|YP_003619072.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
gi|148281098|gb|ABQ55186.1| flagellar motor protein MotA [Legionella pneumophila str. Corby]
gi|295649273|gb|ADG25120.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
Length = 257
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 22/255 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
T+IGL L II G GG+ L+ ++IV G LG ++ PL K + L
Sbjct: 4 LTLIGLLTGFLAIIVGQIFEGGDLNSLLNLPALLIVMGGTLGAVMVQTPLTTFKRAFRIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + + L L ++ E+ +D N I+ +
Sbjct: 64 PWVVKPPHHNFE---ECRTTLIELSRKARQLGLLSLEDRLDVETNPLIYKGLE------- 113
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++V + +++ EID ++ L+ H MG P IGI+GA+
Sbjct: 114 -----------LLVTGVDKLTLRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+ M NL+ P LG I V+ T+ G+ + P+ +++KS + +V
Sbjct: 163 LGLIQVMRNLAD-PSQLGLGIAVAFVATIYGVGFANLFFLPVANKLKSCISHRVHFDEMV 221
Query: 242 KKALIAYMNGAIPQV 256
+ L+A +G P +
Sbjct: 222 VEGLVAMASGESPNM 236
>gi|75761763|ref|ZP_00741701.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228903030|ref|ZP_04067169.1| hypothetical protein bthur0014_41970 [Bacillus thuringiensis IBL
4222]
gi|228910336|ref|ZP_04074152.1| hypothetical protein bthur0013_44830 [Bacillus thuringiensis IBL
200]
gi|228967606|ref|ZP_04128629.1| hypothetical protein bthur0004_44000 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74490748|gb|EAO54026.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228792097|gb|EEM39676.1| hypothetical protein bthur0004_44000 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228849288|gb|EEM94126.1| hypothetical protein bthur0013_44830 [Bacillus thuringiensis IBL
200]
gi|228856623|gb|EEN01144.1| hypothetical protein bthur0014_41970 [Bacillus thuringiensis IBL
4222]
Length = 266
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLILGFLAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|52079918|ref|YP_078709.1| flagellar motor protein MotA [Bacillus licheniformis ATCC 14580]
gi|52785289|ref|YP_091118.1| flagellar motor protein MotA [Bacillus licheniformis ATCC 14580]
gi|319646265|ref|ZP_08000495.1| MotA protein [Bacillus sp. BT1B_CT2]
gi|52003129|gb|AAU23071.1| motility protein A [Bacillus licheniformis ATCC 14580]
gi|52347791|gb|AAU40425.1| MotA [Bacillus licheniformis ATCC 14580]
gi|317392015|gb|EFV72812.1| MotA protein [Bacillus sp. BT1B_CT2]
Length = 267
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 116/260 (44%), Gaps = 21/260 (8%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+ G G +P +L+ P +I+ + V+A P++ +K +F K +
Sbjct: 16 VGVGMVMKGVSPSVLVNPAAWLIILVGTIAAVVIAFPIRELKKVPKLFGILFKEKKMI-- 73
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
+++ + ++ E ++++ + F+ + M M
Sbjct: 74 EINELIPMFSEWAQIARREGLLALEANLNEIDD-----------------EFLKNGMSMA 116
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ G + + I +++ EE++ + + G P +G++GA++G+I A+ ++S
Sbjct: 117 VDGQSADF-IRDVLTEEVEAMEERHQVGAGIFTQAGTYAPTLGVLGAVVGLIAALADMSD 175
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+ + LG AI + TLLGI Y L +P +++K ++ ++ ++ + +++ + G
Sbjct: 176 T-EALGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKVREVMIEGILSILEGQA 234
Query: 254 PQVAIEYGRKVLPLSERPSI 273
P+V + + SER SI
Sbjct: 235 PKVIEQKLLMYVSPSERSSI 254
>gi|229072016|ref|ZP_04205226.1| hypothetical protein bcere0025_41830 [Bacillus cereus F65185]
gi|228711175|gb|EEL63140.1| hypothetical protein bcere0025_41830 [Bacillus cereus F65185]
Length = 266
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + +I G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLILGFVAVIVGMVVKGADITALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|258513970|ref|YP_003190192.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum acetoxidans DSM
771]
gi|257777675|gb|ACV61569.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum acetoxidans DSM
771]
Length = 260
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 22/271 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ +IG+ +L ++ GF GG+ LIQ +IV G G V ++ +K
Sbjct: 3 LAVLIGVVGGLLSLVLGFMWEGGHVGSLIQKTAALIVFGGTFGATVACFSVQDLKVIPQI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L K + D + L ++ E+ I N
Sbjct: 63 LKNALTVKLPEESEIID---QIVDLADQARREGLLYLEDQISSMDN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++++I G + + N+M+ EI + G P +GI+G
Sbjct: 106 ---EFLKKGIQLVIDGT-EAELVRNIMETEIISLEERNEVGASFFEAAGGFAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GN+ P LG I V+ TL G+ + L PL ++IK+ K+ + +
Sbjct: 162 VMGLVHVLGNMDD-PTTLGPKIAVAFIATLYGVASANVLYLPLGAKIKNVSKKEVIIKEL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
V + +IA G P + E L ++RP
Sbjct: 221 VMEGVIALQGGNNPLLIRERLNAYLNPNKRP 251
>gi|313610150|gb|EFR85460.1| chemotaxis protein MotA [Listeria monocytogenes FSL F2-208]
Length = 283
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 111/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + + +++ E+ +D+ +
Sbjct: 63 FKILFTKEKMP--DKVEXXXXYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P+V E L E+
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSFLSPKEK 252
>gi|315644425|ref|ZP_07897558.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
gi|315280175|gb|EFU43468.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
Length = 266
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 119/277 (42%), Gaps = 21/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIGL I I+ ++ G G + L P +I+ G + PL +K
Sbjct: 3 ISTIIGLIIGIVAVVVGMLLKGASLLALYNPAAYLIILGGTAATLFIGFPLVELKKIPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F D++KL ++ E +D+ +
Sbjct: 63 VKMTFL--KQNLMDKTDMIKLFMEWASITRREGLLALETKVDEIDD-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF+ + MRMII GN + + + +++ E+I+ S G P++G++GA
Sbjct: 107 ---TFLRNGMRMIIDGNDQEF-VRDVLMEDINATEERHRSGALIFSQAGMYAPSLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+ ++ + L AIG + TLLGI Y +C+P+ +++K ++ + ++
Sbjct: 163 VIGLIAALSHMEDMGE-LAHAIGAAFIATLLGIFTGYVICHPIANKLKRLSKREVEIRLM 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ + L++ +G + L SER +
Sbjct: 222 MVEGLLSIQSGVSTIAINQKLSVFLTPSERAELSERE 258
>gi|54294668|ref|YP_127083.1| flagellar motor protein [Legionella pneumophila str. Lens]
gi|53754500|emb|CAH15984.1| flagellar motor protein MotA [Legionella pneumophila str. Lens]
Length = 257
Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 22/255 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
T+IGL L II G GG+ L+ ++IV G LG ++ PL K + L
Sbjct: 4 LTLIGLLTGFLAIIVGQMFEGGDLNSLLNFPALLIVMGGTLGAVMVQTPLTTFKRAFRIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + + L L ++ E+ +D N I+ +
Sbjct: 64 PWVVKPPHHNFE---ECRTTLIELSRKARQLGLLSLEDRLDVETNPLIYKGLE------- 113
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++V + +++ EID ++ L+ H MG P +GI+GA+
Sbjct: 114 -----------LLVTGVDKLTLRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTVGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+ M NL+ P LG I V+ T+ G+ + P+ +++KS + +V
Sbjct: 163 LGLIQVMRNLAD-PSQLGLGIAVAFVATIYGVGFANLFFLPVANKLKSCISHRVHFDEMV 221
Query: 242 KKALIAYMNGAIPQV 256
+ L+A +G P +
Sbjct: 222 VEGLVAMASGESPNM 236
>gi|254974361|ref|ZP_05270833.1| putative chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091755|ref|ZP_05321233.1| putative chemotaxis protein [Clostridium difficile CIP 107932]
gi|255313485|ref|ZP_05355068.1| putative chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255516173|ref|ZP_05383849.1| putative chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255649269|ref|ZP_05396171.1| putative chemotaxis protein [Clostridium difficile QCD-37x79]
gi|260682441|ref|YP_003213726.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260686040|ref|YP_003217173.1| putative chemotaxis protein [Clostridium difficile R20291]
gi|306519370|ref|ZP_07405717.1| putative chemotaxis protein [Clostridium difficile QCD-32g58]
gi|260208604|emb|CBA61320.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260212056|emb|CBE02636.1| putative chemotaxis protein [Clostridium difficile R20291]
Length = 262
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 19/276 (6%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T+I + I ++ F GG+ +L ++V G +G + P V K S
Sbjct: 1 MTTLIFFIVGIASLVVAFVIDGGHIGVLFVFSSALVVFGGTIGAVGASTPFPVFKKSIKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L F K + + + +K + I EN+
Sbjct: 61 MLLAFKNKKPN---NIENIIYFKEIATKARKEGLLSVDKEI---------------SEND 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL FI + +++ G + I N+++ +I I + G P +GI+G
Sbjct: 103 ELDPFIRKGLELMVDG-VDAVTIRNILESQIQITSKRHKEGIAIFDSAGGYAPTLGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS +P LG I V+ TL G+ + + P+ S++K+ ++ ++
Sbjct: 162 VMGLVHILGNLSSNPDALGPQISVAFLATLYGVGSANLIWLPIASKLKAINQQEISERLL 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V +A+++ + G + E + L E +E +
Sbjct: 222 VIEAILSILEGDNSNLMTEKLKIFLNSKELIELEEI 257
>gi|126698324|ref|YP_001087221.1| putative chemotaxis protein [Clostridium difficile 630]
gi|115249761|emb|CAJ67578.1| putative MotA/TolQ/ExbB proton channel [Clostridium difficile]
Length = 262
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 58/278 (20%), Positives = 115/278 (41%), Gaps = 22/278 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T+I + I ++ F GG+ L ++V G +G + P V K S
Sbjct: 1 MTTLIFFIVGIASLVVAFVIDGGHVGALFVFSSALVVFGGTIGAVGASTPFPVFKKSIKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L F K + + + +K + I EN+
Sbjct: 61 MLLAFKNKKPN---NIENIIYFKEIATKARKEGLLSIDKEI---------------SEND 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
EL FI + +++ G + I N+++ +I I + G P +GI+G
Sbjct: 103 ELDPFIRKGLELMVDG-VDAVTIRNILESQIQITSKRHKEGIAIFDSSGGYAPTLGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS +P LG I V+ TL G+ + + P+ S++K+ ++ ++
Sbjct: 162 VMGLVHILGNLSSNPDALGPQISVAFLATLYGVGSANLIWLPIASKLKAINQQEISERLL 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
V +A+++ + G + E + L E + + +
Sbjct: 222 VIEAILSILEGDNSNLMTEKLKIFLNSKE---LIELEE 256
>gi|52842008|ref|YP_095807.1| flagellar motor protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54297694|ref|YP_124063.1| flagellar motor protein [Legionella pneumophila str. Paris]
gi|52629119|gb|AAU27860.1| flagellar motor protein MotA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53751479|emb|CAH12897.1| flagellar motor protein MotA [Legionella pneumophila str. Paris]
gi|307610481|emb|CBX00053.1| flagellar motor protein MotA [Legionella pneumophila 130b]
Length = 257
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 22/255 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
T+IGL L II G GG+ L+ ++IV G LG ++ PL K + L
Sbjct: 4 LTLIGLLTGFLAIIVGQIFEGGDLNSLLNFPALLIVMGGTLGAVMVQTPLTTFKRAFRIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + + L L ++ E+ +D N I+ +
Sbjct: 64 PWVVKPPHHNFE---ECRTTLIELSRKARQLGLLSLEDRLDVETNPLIYKGLE------- 113
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++V + +++ EID ++ L+ H MG P IGI+GA+
Sbjct: 114 -----------LLVTGVDKLTLRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+ M NL+ P LG I V+ T+ G+ + P+ +++KS + +V
Sbjct: 163 LGLIQVMRNLAD-PSQLGLGIAVAFVATIYGVGFANLFFLPVANKLKSCISHKVHFDEMV 221
Query: 242 KKALIAYMNGAIPQV 256
+ L+A +G P +
Sbjct: 222 VEGLVAMASGESPNM 236
>gi|78221682|ref|YP_383429.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
gi|78192937|gb|ABB30704.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
Length = 254
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + +IGG G + LIQP +IV G G ++ P+K I +
Sbjct: 3 IATIIGLVMGFGAVIGGALIEGLHLGALIQPTAALIVLGGTFGAAFVSYPMKTIIGAVKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + V+K + ++ E N
Sbjct: 63 IRKVLFPAQHDPEK---VIKEIIGYAAKARRNGLISLEQE-----------------AQN 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + +++ G ++ ++ EI + G P IGI+GA
Sbjct: 103 VKDAFTKKGISLVVDG-IDPQKLRETLEIEIAYYEEHSKQSAEFFEAAGGYAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS S LG I V+ T+ G++ + +C P ++IK ++ +
Sbjct: 162 VLGLIHVMANLSDS-SKLGAGIAVAFVATIYGLMTANIVCLPFGTKIKHGIKEELICKNM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + LIA NG P + + + +
Sbjct: 221 IIEGLIAIQNGENPHFIEQKLKAFIQEGD 249
>gi|15895121|ref|NP_348470.1| flagellar motor protein MotA [Clostridium acetobutylicum ATCC 824]
gi|15024822|gb|AAK79810.1|AE007693_8 Flagellar motor component MotA [Clostridium acetobutylicum ATCC
824]
gi|325509260|gb|ADZ20896.1| flagellar motor protein MotA [Clostridium acetobutylicum EA 2018]
Length = 259
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 111/274 (40%), Gaps = 21/274 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +IG+ +L ++ G G N +L+ P +I+ + + P +
Sbjct: 3 IFLVIGIITGLLAVVVGMIVKGANVAVLLNPAAAIIIIVGTSAAVMNSFPKNEFTNIPKV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ K ++ +++ + + +K E I N
Sbjct: 63 FKSLMRGK--SKEDPVEIINQIVDMAQETRKNGLLSLEGKIHSIDN-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G I +++ EI+ + G + P +G++GA
Sbjct: 107 ---EFLKTGLEMVVDG-VDPQHIAEVLEMEIESTEERHRGGALIFTTAGGAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + + LG I + TL GI Y +C+P S++K L++ + I
Sbjct: 163 VVGLIGALGNLNDT-EKLGHMIAGAFVATLYGIFFGYVICHPFASRLKRKSLEEINVMRI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + ++ +G P+ + L +R SI+
Sbjct: 222 ITEGILDIQSGNNPKSIEKKLIGTLSPKQRQSIQ 255
>gi|297618037|ref|YP_003703196.1| MotA/TolQ/ExbB proton channel [Syntrophothermus lipocalidus DSM
12680]
gi|297145874|gb|ADI02631.1| MotA/TolQ/ExbB proton channel [Syntrophothermus lipocalidus DSM
12680]
Length = 263
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 122/282 (43%), Gaps = 22/282 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++IGL I + +I GF G +L++ +IV G +G ++ + +K
Sbjct: 3 LTSLIGLIIGLAGLILGFVLEEGKVGMLLKETAALIVFGGTIGAVTVSFSSEELKTIPYF 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K + + + + L + ++ E +++ N
Sbjct: 63 LKVVFTNKKI---EFGETIDQLVQVADKARREGLLSLETQLEELEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++++I G N+++ EI+ + + G P +GI+G
Sbjct: 106 ---EFMRRALQLVIDGT-DPELTRNMLEMEIEAFEKRQKLGVDIFNAAGGFAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+S+ P LG AI V+ TL GI + L P +IK K+ +L +
Sbjct: 162 VMGLVQVLSNVSE-PDKLGGAIAVAFIATLYGIFSANILWIPFAGKIKVKTEKEVKLMEL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
V + +++ G P+V E L +E+ ++ + ++
Sbjct: 221 VLEGVLSVQAGENPRVIREKLMTFLAPAEKQAMFEAQKAGVE 262
>gi|304311122|ref|YP_003810720.1| Flagellar motor protein MotA [gamma proteobacterium HdN1]
gi|301796855|emb|CBL45067.1| Flagellar motor protein MotA [gamma proteobacterium HdN1]
Length = 246
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ TI+GL + I +IGG GG+ L+ VIV G LG ++ ++++
Sbjct: 3 ILTIVGLVVGIAAVIGGNALEGGHVSGLLNAPAAVIVIGGTLGAAMLQTTKSTLQNTFRL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
IF + + +K + + +K E + +
Sbjct: 63 TSWIFVPPSSHMQ---ENIKKIISWSFTARKEGLLGLEAMV-----------------DR 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F +++++ I ++M+ E+ L+ MG P IGI+GA
Sbjct: 103 EKDPFAKKGLQLLVDA-IDPPVIRSVMEVELFTRQERDLQSARVFEAMGGYSPTIGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I MGNL+ P LG I + T+ G+ L+ L PL +++K+ Q RL +
Sbjct: 162 VMGLIHVMGNLAD-PSKLGAGIATAFVATIYGVGLANLLFLPLAAKLKAVIKTQTRLREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ + L+A +G P+ L
Sbjct: 221 MIEGLLAIADGENPRTIEMKLEGYL 245
>gi|288573019|ref|ZP_06391376.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568760|gb|EFC90317.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 264
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 116/275 (42%), Gaps = 23/275 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL ++++ ++GG A GG + ++I G +G +MANP+ IK G
Sbjct: 3 LATIIGLSLSLILVVGGIVA-GGEAAAFVNLPSMLITIGGTMGAVIMANPMDRIKKLGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
F + +++ + ++ E +
Sbjct: 62 TRIAFFSQTP---DLVSLVQTIVSFAEKARREGLLALEAD-----------------ASE 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G ++ ++D EI ++ MGE PA G++G
Sbjct: 102 LDDEFLAKSIQLVVDGT-DPELVKAILDTEISVLEERHASNKGMFDTMGELFPAFGMLGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL P LG + V+L T G ++ P ++++ + ++ + +
Sbjct: 161 LIGLIAMLRNLDD-PGSLGPGMAVALITTFYGSFMANIFALPTSAKLAARSSEETVVREL 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A G P++ E + LP +R +E
Sbjct: 220 MVEGVLAIQAGENPRIVEEKLKVFLPPEQRKELEE 254
>gi|82702443|ref|YP_412009.1| flagellar motor protein [Nitrosospira multiformis ATCC 25196]
gi|82410508|gb|ABB74617.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
Length = 246
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 116/263 (44%), Gaps = 22/263 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+IIG+ I ++ + GG GG+ LIQ +V+V G LG ++ +P++ +
Sbjct: 5 SIIGIGIALVAVFGGQVLEGGHHASLIQVTSLVVVLGGTLGAVLLQSPVRQFVLAMKMSR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
IF L + V++ + +K +NH++ +
Sbjct: 65 WIFVPPVLNPEA---VVQHIATWSAAARKEGLLALDNHVEGIDD---------------- 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ ++M++ G ++ +++ EI+ + G P IGI+GA++
Sbjct: 106 -PFVRKGLQMVVDGT-EPKVLQRVLEVEIETFEDLHHQGAKVWEAAGGYAPTIGILGAVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ M NLS +P LG I V+ T+ G+ L+ P+ +++K+ +Q L ++
Sbjct: 164 GLIQVMENLS-NPADLGAGIAVAFVATIYGVGLANLAFLPIANKLKTLIARQVLLRDMLV 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVL 265
L+ G P++ E + +
Sbjct: 223 DGLVGIAKGENPRLIAERLKGYV 245
>gi|121533428|ref|ZP_01665256.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
gi|121307987|gb|EAX48901.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
Length = 261
Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 62/278 (22%), Positives = 123/278 (44%), Gaps = 21/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST++G+ + ++ I G G N IL+ I+I+ L + A PL IK V
Sbjct: 4 STVLGMLVGVVAISVGMVLKGANLSILLNYAAIMIIFVGTLASLLNAFPLAQIKKLPVLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + L T ++LKL + ++ E +++ +
Sbjct: 64 KLLFKEQQLMPRT--ELLKLFVEMAQTARREGLLALEGRLEEISD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + M++V + I ++++ EI+++ K + G P +G++GA+
Sbjct: 107 --PFLRNGL-MMVVDGMDTELIRDVLEAEIELMQERHSKGALMFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GNL + LG +I + TL GI Y + +P +++K + L ++
Sbjct: 164 VGLIAALGNLDD-IEKLGHSIAAAFVATLFGIFSGYVMWHPFANKLKFLSKNEVELKRMM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ +++ G P +P SER S++ +E
Sbjct: 223 IEGILSLQAGESPNALEAKLVVFIPQSERASLKEKREE 260
>gi|226950065|ref|YP_002805156.1| chemotaxis MotA protein [Clostridium botulinum A2 str. Kyoto]
gi|226842087|gb|ACO84753.1| chemotaxis MotA protein [Clostridium botulinum A2 str. Kyoto]
Length = 270
Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 112/276 (40%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T IGL + +I G G N + + I G L ++ P+ K V
Sbjct: 6 ILTPIGLVLCFGLVIWGMATGGSNLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F Y + DV++ L ++ E+ I NN
Sbjct: 66 IVQTFKYNGMS---NIDVIQNFVDLSRKARREGLLSLEDAI-----------------NN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I ++M+ EID + + G PA G++G
Sbjct: 106 LTDDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ S + + +G +L T G +++ + NP+ + + + +
Sbjct: 165 LIGLIQMLANLTDS-STIASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + ++A +G P++ E L +ER + V
Sbjct: 224 VLEGVLAIQSGVNPRIMEEKLVSYLSPTERLAYSKV 259
>gi|126664985|ref|ZP_01735968.1| flagellar motor protein MotC [Marinobacter sp. ELB17]
gi|126630355|gb|EBA00970.1| flagellar motor protein MotC [Marinobacter sp. ELB17]
Length = 247
Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 109/265 (41%), Gaps = 22/265 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++G+ + + I+GG GG L +IV G L ++ V+K +
Sbjct: 4 LSLLGVILAFVAILGGNLLEGGALASLFNAPAALIVIGGTLAATILQTSWPVLKHAFSQS 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + D + +K E L +E
Sbjct: 64 RWVFVPPFVSLEDGLDK---VVNWSVIARKKGLLGLEG-----------------LAESE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + +++ G A S I ++M+ E++ L MG P IGI+GA+
Sbjct: 104 PERFVQKGLLLLVDG-AESNTIRSIMEVELETREQRDLDSARVFEAMGGYSPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I+ M NL + P+ LG+ I + T+ G+ L+ L P+ ++++ ++ R ++
Sbjct: 163 MGLIQVMTNL-EDPESLGSGIATAFVATIYGVALANLLFFPVANKLRGLVRERTRYEDMM 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLP 266
+ LIA G P+ R LP
Sbjct: 222 IEGLIAIAEGENPKSIEIRLRGFLP 246
>gi|330721194|gb|EGG99304.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC2047]
Length = 248
Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IG+ + ++GG + GG+ L +IV G LG ++ + + +G L
Sbjct: 4 LSVIGIILAFAAVLGGNFIEGGHFSALFNLPAAMIVIGGTLGAAILHSSWASVSRAGKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
L +F +L Y K+L+ M +K E ++
Sbjct: 64 LWVFNPPSLN--VYQTSDKILHWSMT-ARKEGLLGLEAIVETEEE--------------- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F +R+++ G I ++ ++ +I LK MG P IGI+GA+
Sbjct: 106 --YFAQKGLRLLVDGT-EPEAIRRALEVDLYLIESRDLKAARFFECMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I M NL+ P LG+ I + T+ G+ L+ L P+ +++K +Q++ ++
Sbjct: 163 MGLIHVMRNLAD-PSELGSGIATAFVATIYGVGLANLLFLPIANKLKGVVQQQYQYNEMI 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +IA G P+ + +
Sbjct: 222 VEGVIAIAEGENPRSIEMKLQGYV 245
>gi|187778758|ref|ZP_02995231.1| hypothetical protein CLOSPO_02353 [Clostridium sporogenes ATCC
15579]
gi|187772383|gb|EDU36185.1| hypothetical protein CLOSPO_02353 [Clostridium sporogenes ATCC
15579]
Length = 270
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 110/276 (39%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T IGL + +I G G N + + I G L ++ P+ K V
Sbjct: 6 ILTPIGLVLCFGLVIWGMSTGGSNLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F + DV++ L ++ E+ I NN
Sbjct: 66 IVQTFKDNGMS---NIDVIQNFVDLSRKARREGLLSLEDAI-----------------NN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I +M+ EID + + G PA G++G
Sbjct: 106 LTDDYMKKGLRMVVDG-IEPETIREIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ S + + +G +L T G +++ + NP+ + + + +
Sbjct: 165 LIGLIQMLANLTDS-STIASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + ++A +G P++ E L +ER + V
Sbjct: 224 VLEGVLAIQSGVNPRIMEEKLVSYLSPTERQAYSKV 259
>gi|189423112|ref|YP_001950289.1| MotA/TolQ/ExbB proton channel [Geobacter lovleyi SZ]
gi|189419371|gb|ACD93769.1| MotA/TolQ/ExbB proton channel [Geobacter lovleyi SZ]
Length = 249
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 103/264 (39%), Gaps = 22/264 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + + GG G + LI P +IV G G ++ PL +
Sbjct: 3 LATIIGLALGFGAVFGGAVLEGVHVSALISPTSALIVLGGTFGAVFISFPLAACINGFKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + + V+K + ++ E N
Sbjct: 63 IKTAFLPPKVDPEA---VVKDIIGYATKARRNGLISLEQE-----------------AQN 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI + +++ G ++ ++ EI K G P IGI+GA
Sbjct: 103 AKDPFIKKGISLVVDG-IDPQKLRETLEAEIMAYEDHKKHSVEFFEAAGGYSPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I MGNLS + LG I + T+ G++ + +C P+ S+IK ++ ++
Sbjct: 162 VLGLIHVMGNLSDT-SKLGAGIAAAFVATIYGLMTANIICLPIGSKIKIRMKEEVLRRVM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
+ + LIA NG P + +
Sbjct: 221 IVEGLIAIQNGENPHFIEQKLKAF 244
>gi|251794147|ref|YP_003008878.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. JDR-2]
gi|247541773|gb|ACS98791.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. JDR-2]
Length = 265
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 118/276 (42%), Gaps = 21/276 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
STIIG+ + ++ ++ G G L+ P +I+ + ++A P+ + G
Sbjct: 4 STIIGIILGLVAVLVGMTLKGAALSNLLNPAAYMIIVLGTIASVMIAFPMSELSKVGKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F + L +++ ++ E ++D +
Sbjct: 64 KIAFKEQPLMPRE--QLIESFMEWASITRREGLLALEAKVEDIED--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
TF+ + MRMII GN + + + +++ E+I + G P +G++GA+
Sbjct: 107 --TFLRNGMRMIIDGNDQDF-VRDVLLEDISATEDRHKAGALIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+G++ + L +I + TLLGI Y L +PL +++K K+ +L +++
Sbjct: 164 VGLIGALGHMDDM-ETLAHSIAGAFIATLLGIFTGYVLWHPLANKLKRLSKKEVQLRLMM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ L++ +G + L +ER ++
Sbjct: 223 VEGLLSIQSGVSTIAINQKLSVFLTPTERVAMREKE 258
>gi|256830502|ref|YP_003159230.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
gi|256579678|gb|ACU90814.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
Length = 251
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ + +I A+GG+ ++ + ++IV G +G ++ PL+ +
Sbjct: 3 LATIIGILVAFGLVI---AALGGDGFLFLDFSSLLIVIGGTIGAVLVTYPLESVLGVARI 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F KA D ++ +++ E H+ +
Sbjct: 60 IKKTFMSKA---DDPTALIAQFSDYATRVRREGILSLEAHLKNI---------------- 100
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++ + G I+ +M+ EI + LK + G PA+G++G
Sbjct: 101 -PDDFLRKGLQLTVDG-LDPQLIQEIMETEISCLEERHLKGAEILQTFGNLAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + ++ P +G A+ V+L T G +++ + P+ ++++ ++ + +
Sbjct: 159 VIGLVLMLKRMND-PSTIGPAMAVALLTTFYGAVMANLIFIPMAGKLRARSREEVLVRSM 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ + +++ G P++ E LP ER
Sbjct: 218 IVEGIMSISRGENPRILEEKLNSYLPPKERK 248
>gi|206603128|gb|EDZ39608.1| Putative flagellar motor component (MotA) [Leptospirillum sp. Group
II '5-way CG']
Length = 260
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 113/274 (41%), Gaps = 19/274 (6%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL I I+GG G + Q +IV G +G ++ P+ I + S
Sbjct: 3 ITTLLGLVIGFGGILGGAAIEGLPLGTIFQMTAAIIVFGGTIGATLVTTPMAQILAAVRS 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + +++ + L +K + E+ +DDP+
Sbjct: 63 VPRLFLNP---KSDPVKIIRKIVELSKVSRKEGLLKLESFLDDPFIRG------------ 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +RM++ G + ++ + ++ E I E+ G P IGI+GA
Sbjct: 108 --DAFLTRGVRMVMDGTDIA-KVRDALETESRYIEDEEAASAKVFESAGGYAPTIGILGA 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS P L I + T+ G+ + PL+ ++K + R I
Sbjct: 165 VLGLIHVMSNLSD-PNKLAEGIATAFVATVYGVGSANLAYLPLSGKLKIKNHYEGRNREI 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + L+A G P + L ER +E
Sbjct: 224 IIEGLVAIGQGENPNNIEDRLMGFLNEKERSGME 257
>gi|153939764|ref|YP_001391526.1| flagellar motor protein MotA [Clostridium botulinum F str.
Langeland]
gi|170754260|ref|YP_001781839.1| flagellar motor protein MotA [Clostridium botulinum B1 str. Okra]
gi|152935660|gb|ABS41158.1| chemotaxis protein MotA [Clostridium botulinum F str. Langeland]
gi|169119472|gb|ACA43308.1| putative chemotaxis protein MotA [Clostridium botulinum B1 str.
Okra]
gi|295319552|gb|ADF99929.1| chemotaxis protein MotA [Clostridium botulinum F str. 230613]
Length = 261
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++G+ I + +I G G N +L+ P +I+ + + + P
Sbjct: 3 IFLVLGVIIGLSSVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFPKDEFLKIPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G+ ++ + L +K E +D N
Sbjct: 63 LGVLFKEK--GKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G SY I +++ EI + + G + P +G++GA
Sbjct: 108 ----FMRKGLTMVVDGTESSY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + LG I + TL GI Y +C+P S++K ++ I
Sbjct: 163 VVGLIGALGNLNDV-EKLGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A G PQ E +L +ER IE
Sbjct: 222 IVEGVLAIQEGVNPQKIQEKLIGMLEPNERIKIEA 256
>gi|168182735|ref|ZP_02617399.1| chemotaxis protein MotA [Clostridium botulinum Bf]
gi|237796092|ref|YP_002863644.1| chemotaxis MotA protein [Clostridium botulinum Ba4 str. 657]
gi|182674180|gb|EDT86141.1| chemotaxis protein MotA [Clostridium botulinum Bf]
gi|229261249|gb|ACQ52282.1| chemotaxis protein MotA [Clostridium botulinum Ba4 str. 657]
Length = 270
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T IGL + +I G G + + + I G L ++ P+ K V
Sbjct: 6 ILTPIGLVLCFGLVIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F + DV++ L ++ E+ I NN
Sbjct: 66 IVQTFKDNGMS---NIDVIQNFVDLSRKARREGLLSLEDAI-----------------NN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I ++M+ EID + + G PA G++G
Sbjct: 106 LTDDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ S + + +G +L T G +++ + NP+ + + + +
Sbjct: 165 LIGLIQMLANLTDS-STIASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + ++A +G P++ E L +ER + V
Sbjct: 224 VLEGVLAIQSGVNPRIMEEKLVSYLSPTERLAYSKV 259
>gi|322806982|emb|CBZ04552.1| flagellar motor rotation protein MotA [Clostridium botulinum H04402
065]
Length = 270
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T IGL + +I G G + + + I G L ++ P+ K V
Sbjct: 6 ILTPIGLVLCFGLVIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F + DV++ L ++ E+ I NN
Sbjct: 66 IVQTFKDNGMS---NIDVIQNFVDLSRKARREGLLSLEDAI-----------------NN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I ++M+ EID + + G PA G++G
Sbjct: 106 LTDDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ S + + +G +L T G +++ + NP+ + + + +
Sbjct: 165 LIGLIQMLANLTDS-STIASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + ++A +G P++ E L +ER + V
Sbjct: 224 VLEGVLAIQSGVNPRIMEEKLVSYLSPTERLAYNKV 259
>gi|125974910|ref|YP_001038820.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum ATCC 27405]
gi|256003833|ref|ZP_05428820.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum DSM 2360]
gi|281418624|ref|ZP_06249643.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum JW20]
gi|125715135|gb|ABN53627.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum ATCC 27405]
gi|255992171|gb|EEU02266.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum DSM 2360]
gi|281407708|gb|EFB37967.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum JW20]
gi|316939121|gb|ADU73155.1| MotA/TolQ/ExbB proton channel [Clostridium thermocellum DSM 1313]
Length = 279
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 118/280 (42%), Gaps = 23/280 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++C+I G + ++I G GL +++ +
Sbjct: 3 LATIIGLILGVICVIWSIMLDG-SLLSFWDFASVIITLGGGLCATLVSCKITEFAKIMKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ K D +++L L ++ E+ ++ N
Sbjct: 62 TVKVLRGKEPRPQ---DTIRMLVELSLKARREGLLSLESEQENIDN-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G I + MD E++ + K M PA G++G
Sbjct: 105 ---DFLKQSLQLVVDG-VEPEVIVDTMDLELENMKARHDKGVSLFKTMAAQFPAWGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+IK + +L P +G+A+ V+L T G IL+ +CNP+ +++ ++ + +
Sbjct: 161 LIGLIKLLESLDD-PSKIGSAMAVALVTTFYGSILANLICNPIATKLAEKSKEEIQEKKM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ + +++ G P++ + L ++ + +A +
Sbjct: 220 IIEGVLSIQAGENPRILEHKLKTFLSPKQKLEYDKMANQA 259
>gi|269792935|ref|YP_003317839.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100570|gb|ACZ19557.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 262
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 114/276 (41%), Gaps = 29/276 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++IG + ++ +IGG GG+P + ++I G LG +MANP++ K
Sbjct: 3 LASVIGFLLALILVIGG-ILAGGDPGAFVDAPSLLITGGGTLGAAIMANPIERTKALPKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH---IDDPYNSTIFTSIPTVL 117
+ + F + +++ L + E +DDP
Sbjct: 62 IRKAFFNDPI---DLPGLIQTLVSFAEKARWEGLLALEEDAAQLDDP------------- 105
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F+ +++++ G +++++D EI ++ M E PA G+
Sbjct: 106 -------FLKKSIQLVVDGT-DPELVKSILDTEIGLLEERHGAGKAYFDTMAELAPAFGM 157
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I +GNL P LG + +L T G ++ LC P + ++ ++
Sbjct: 158 LGTLIGLILMLGNLDD-PDALGPGMATALITTFYGSFIANVLCIPTSKKLAYRSSQEVLA 216
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ + ++A G P++ E + L R +
Sbjct: 217 RELMVEGILAIQAGENPRIVEEKLKVFLSPDLRAKM 252
>gi|170760022|ref|YP_001787604.1| flagellar motor protein MotA [Clostridium botulinum A3 str. Loch
Maree]
gi|169407011|gb|ACA55422.1| putative chemotaxis protein MotA [Clostridium botulinum A3 str.
Loch Maree]
Length = 261
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 60/274 (21%), Positives = 112/274 (40%), Gaps = 21/274 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++G+ I + +I G G N +L+ P +I+ + + + P
Sbjct: 3 IFLVLGVIIGLSSVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFPKDEFLKIPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G+ ++ + L +K E +D N
Sbjct: 63 LGVLFKEK--GKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G Y I +++ EI + + G + P +G++GA
Sbjct: 108 ----FMKKGLTMVVDGTEPGY-IREVLEIEIQTVEERHCLGASIFTTAGGAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + LG I + TL GI Y +C+P S++K ++ I
Sbjct: 163 VVGLIGALGNLNDV-EKLGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + ++A G PQ E +L +ER IE
Sbjct: 222 IVEGVLAIQEGVNPQKIQEKLIGMLEPNERIKIE 255
>gi|226949497|ref|YP_002804588.1| chemotaxis protein MotA [Clostridium botulinum A2 str. Kyoto]
gi|226842638|gb|ACO85304.1| chemotaxis protein MotA [Clostridium botulinum A2 str. Kyoto]
Length = 261
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++G+ I + +I G G N +L+ P +I+ + + + P
Sbjct: 3 IFLVLGVIIGLSAVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFPKDEFLKIPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G+ ++ + L +K E +D N
Sbjct: 63 LGVLFKEK--GKGEQVSIVMEIVELSKTSRKDGLLALEKIVDSMSNK------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G SY I +++ EI + + G + P +G++GA
Sbjct: 108 ----FMKKGLTMVVDGTESSY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + LG I + TL GI Y +C+P S++K ++ I
Sbjct: 163 VVGLIGALGNLNDV-EKLGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A G PQ E +L +ER IE
Sbjct: 222 IVEGVLAIQEGVNPQKIQEKLIGMLEPNERIKIEA 256
>gi|124516289|gb|EAY57797.1| putative flagellar motor component (MotA) [Leptospirillum rubarum]
Length = 260
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 113/274 (41%), Gaps = 19/274 (6%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL I I+GG G + Q +IV G +G ++ P+ I + S
Sbjct: 3 ITTLLGLVIGFGGILGGAAIEGLPLGTIFQMTAAIIVFGGTIGATLVTTPMAQILAAVRS 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + +++ + L +K + E+ +DDP+
Sbjct: 63 VPRLFLNP---KSDPVKIIRKIVELSKVSRKEGLLKLESFLDDPFIRG------------ 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +RM++ G + ++ + ++ E I E+ G P IGI+GA
Sbjct: 108 --DAFLTRGVRMVMDGTDIA-KVRDALETESRYIEDEEAASAKVFEAAGGYAPTIGILGA 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS P L I + T+ G+ + PL+ ++K + R I
Sbjct: 165 VLGLIHVMSNLSD-PNKLAEGIATAFVATVYGVGSANLAYLPLSGKLKIKNHYEGRNREI 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + L+A G P + L ER +E
Sbjct: 224 IIEGLVAIGQGENPNNIEDRLMGFLNEKERSGME 257
>gi|312879596|ref|ZP_07739396.1| MotA/TolQ/ExbB proton channel [Aminomonas paucivorans DSM 12260]
gi|310782887|gb|EFQ23285.1| MotA/TolQ/ExbB proton channel [Aminomonas paucivorans DSM 12260]
Length = 264
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 113/280 (40%), Gaps = 23/280 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IG + + +IGG GG P + I+I G LG +MANPL+ K
Sbjct: 3 LGTVIGFLLANILVIGG-ILAGGEPMAFVDIPSILITGGGTLGAAIMANPLERTKALPKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F + +++ L ++ E
Sbjct: 62 VRKAFFADPI---DLTGLIQTLVSFAEKARREGLLALEED-----------------AGQ 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G +++++D EI ++ M E PA G++G
Sbjct: 102 LDDEFMRKSIQLVVDGT-DPELVKSILDTEIGLLEERHAAAKSMFDIMAELAPAFGMLGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +GNL P LG + +L T G ++ LC P++ ++ ++ +
Sbjct: 161 LIGLILMLGNLDD-PDALGPGMATALITTFYGSYIANVLCIPISKKLAYRSSQEILSREL 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ + +++ G P++ E + L + R +E QE
Sbjct: 220 MVEGILSIQAGENPRIVEEKLKVFLSPTMRAKMEEKKQEA 259
>gi|168180923|ref|ZP_02615587.1| chemotaxis MotA protein [Clostridium botulinum NCTC 2916]
gi|182668370|gb|EDT80349.1| chemotaxis MotA protein [Clostridium botulinum NCTC 2916]
Length = 270
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T IGL + +I G G + + + I G L ++ P+ K V
Sbjct: 6 ILTPIGLVLCFGLVIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLLVV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F + DV++ L ++ E+ I NN
Sbjct: 66 IVQTFKDNGMS---NIDVIQNFVDLSRKARREGLLSLEDAI-----------------NN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I ++M+ EID + + G PA G++G
Sbjct: 106 LTDDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ S + + +G +L T G +++ + NP+ + + + +
Sbjct: 165 LIGLIQMLANLTDS-STIASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + ++A +G P++ E L +ER + V
Sbjct: 224 VLEGVLAIQSGVNPRIMEEKLVSYLSPTERLAYNKV 259
>gi|251772420|gb|EES52987.1| putative flagellar motor component (MotA) [Leptospirillum
ferrodiazotrophum]
Length = 264
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 113/275 (41%), Gaps = 19/275 (6%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL I I I+ G G ++QP +IV G G ++ PL I ++
Sbjct: 3 ITTILGLVIGIGAILLGATLEGLPLTTILQPTAAMIVFGGTFGATLLQFPLNFIINALKM 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K++ +++ + L +K + E H++DP
Sbjct: 63 IPRVLISKSVDPGP---IIQKIQDLSKTSRKEGLLKLEAHLEDPEIKA------------ 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +RM++ G + ++ ++ E I E+ Y MG P IGI+GA
Sbjct: 108 --DPYFARGVRMVMDGTEIT-KVREALEVEAHYIEEEEGVVYKVFESMGGYAPTIGILGA 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M N+ P L I + T+ G+ + + P+ ++K + +L I
Sbjct: 165 VLGLIHVMSNMGD-PGKLAEGIATAFVATVYGVGSANLVYLPIGGKLKLKGRGEAKLREI 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ L+ G P + E L +ER E
Sbjct: 224 IVDGLVGIGQGENPGMIEERLLGFLNEAERVKYEQ 258
>gi|237795651|ref|YP_002863203.1| chemotaxis protein MotA [Clostridium botulinum Ba4 str. 657]
gi|229261365|gb|ACQ52398.1| putative chemotaxis protein MotA [Clostridium botulinum Ba4 str.
657]
Length = 261
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++G+ I + +I G G N +L+ P +I+ + + + P
Sbjct: 3 IFLVLGVIIGLSAVIVGMMVKGANVAVLLNPAAAIIILVGTIAAVMNSFPKDEFLKIPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G+ ++ + L +K E +D N
Sbjct: 63 LGVLFKEK--GKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G Y I +++ EI + + G + P +G++GA
Sbjct: 108 ----FMKKGLTMVVDGTEPGY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + LG I + TL GI Y +C+P S++K ++ I
Sbjct: 163 VVGLIGALGNLNDV-EKLGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A G PQ E +L +ER IE
Sbjct: 222 IVEGVLAIQEGVNPQKIQEKLIGMLEPNERIKIEA 256
>gi|170755265|ref|YP_001782269.1| chemotaxis MotA protein [Clostridium botulinum B1 str. Okra]
gi|169120477|gb|ACA44313.1| chemotaxis protein MotA [Clostridium botulinum B1 str. Okra]
Length = 270
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 111/276 (40%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T IGL + II G G N + + I G L ++ P+ K V
Sbjct: 6 ILTPIGLVLCFGLIIWGMATGGSNLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLLVV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F + DV++ L ++ E+ I NN
Sbjct: 66 IVQTFKDNGMS---NIDVIQNFVDLSRKARREGLLSLEDAI-----------------NN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I ++M+ EID + + G PA G++G
Sbjct: 106 LTDDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ S + + +G +L T G +++ + NP+ + + + +
Sbjct: 165 LIGLIQMLANLTDS-STIASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + ++A +G P++ E L +ER + V
Sbjct: 224 VLEGVLAIQSGVNPRIMEEKLVSYLSPTERLAYNKV 259
>gi|226310456|ref|YP_002770350.1| flagellar motor protein MotA [Brevibacillus brevis NBRC 100599]
gi|226093404|dbj|BAH41846.1| chemotaxis MotA protein [Brevibacillus brevis NBRC 100599]
Length = 271
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ + I+ ++ G +P L+ P I+I+ + A P+ +K
Sbjct: 4 STLIGIVLGIVAVVVGMILKHASPMSLLNPAAIMIIIVGTIAALFNAFPMSEMKRIPALF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF + L +++ ++ EN +
Sbjct: 64 KIIFKEQKLP--EKRELIGQFMNWASIARREGLLALEN-----------------TSDEI 104
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + M+MII G + + ++++EEI I S G P +G++GA+
Sbjct: 105 EDPFLRNGMKMIIDGGEPDF-VRDVLNEEIHAIEERHQAGALVFSQAGSYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GNLS LG +I + TLLGI Y L +P +++K + + I+
Sbjct: 164 VGLIAALGNLSD-IDALGISIAAAFVATLLGIFTGYVLWHPFATKLKRKSKAEIEIKKIM 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ L++ G P + +P ER
Sbjct: 223 VEGLLSIQAGVSPTAIEQKLLVYIPYQER 251
>gi|192359153|ref|YP_001982601.1| flagellar motor protein [Cellvibrio japonicus Ueda107]
gi|190685318|gb|ACE82996.1| transporter, MotA/TolQ/ExbB proton channel family [Cellvibrio
japonicus Ueda107]
Length = 248
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 22/267 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+IIG+ I IIGG GG L+ IV G LG ++ P ++ + L
Sbjct: 4 LSIIGVIIGFAAIIGGNLMEGGGLSTLVNGPAAFIVIGGTLGAAILQTPKNSLRRALKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + + + +K E+ + E
Sbjct: 64 GWVFKPPYV---PFKQGVNNISRWAAAARKDGLLGLES-----------------VSERE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F +++++ GN I +++ ++ + L MG P IGI+GA+
Sbjct: 104 KDKFAKKGLQLLVDGN-EPEVIRRVLETDMIVDEQRDLDAIKFYESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I M NL+ P LG I V+ T+ G+ L+ L P+ ++++ + + ++
Sbjct: 163 MGLIHVMNNLAD-PSTLGPGIAVAFVATIYGVALANLLLIPIANKLRMCVNENSQYRELI 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLS 268
+ +IA +G P+ L
Sbjct: 222 IEGIIAIADGENPRSIEMKLNGYLHPH 248
>gi|148380610|ref|YP_001255151.1| chemotaxis MotA protein [Clostridium botulinum A str. ATCC 3502]
gi|153933911|ref|YP_001384896.1| chemotaxis MotA protein [Clostridium botulinum A str. ATCC 19397]
gi|153934553|ref|YP_001388365.1| chemotaxis MotA protein [Clostridium botulinum A str. Hall]
gi|148290094|emb|CAL84213.1| putative chemotaxis MotA protein [Clostridium botulinum A str. ATCC
3502]
gi|152929955|gb|ABS35455.1| chemotaxis protein MotA [Clostridium botulinum A str. ATCC 19397]
gi|152930467|gb|ABS35966.1| chemotaxis protein MotA [Clostridium botulinum A str. Hall]
Length = 270
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 111/276 (40%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T IGL + II G G + + + I G L ++ P+ K V
Sbjct: 6 ILTPIGLVLCFGLIIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLFVV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F + DV++ L ++ E+ I NN
Sbjct: 66 IVQTFKDNGMS---NIDVIQNFVDLSRKARREGLLSLEDAI-----------------NN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I ++M+ EID + + G PA G++G
Sbjct: 106 LTDDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ S + + +G +L T G +++ + NP+ + + + +
Sbjct: 165 LIGLIQMLANLTDS-STIASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + ++A +G P++ E L +ER + V
Sbjct: 224 VLEGVLAIQSGVNPRIMEEKLVSYLSPTERLAYNKV 259
>gi|118581871|ref|YP_903121.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118504581|gb|ABL01064.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
Length = 249
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 104/264 (39%), Gaps = 22/264 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + + GG G + LIQP +IV G G + PL I +
Sbjct: 3 LATIIGLVMGFGAVFGGAVLEGLHLSALIQPTAALIVLGGTFGATFVCFPLSAIIKAFKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + ++ V+K + ++ E
Sbjct: 63 VKIAFLPANVDHES---VVKDIINYATKARRNGLISLEQE-----------------AQT 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G ++ ++ +I G P IGI+GA
Sbjct: 103 AKDPFVKKGISLVVDG-IDPQKLRETLEADITAFEDHSKHSVEFYEAAGGFSPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS + LG I V+ T+ G++++ +C P+ +++K ++ ++
Sbjct: 162 VLGLIHVMSNLSDT-SKLGAGIAVAFVATIYGLMVANIICLPIGTKLKIRMKEEVLRRVM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
+ + LIA NG P + +
Sbjct: 221 ILEGLIAIQNGENPHFIEQKLKAF 244
>gi|56475793|ref|YP_157382.1| flagellar motor protein [Aromatoleum aromaticum EbN1]
gi|56311836|emb|CAI06481.1| chemotaxis motA protein [Aromatoleum aromaticum EbN1]
Length = 246
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 108/265 (40%), Gaps = 22/265 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ + I I+ G GG+ L+QP +IV G LG ++ +PL V +D
Sbjct: 4 TSLIGITLGIAAILSGQVLEGGHISSLVQPTAFLIVVGGTLGAVMLQSPLPVFRDGMRMA 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + D++ + +K E I+
Sbjct: 64 KWVFVPPSSNH---TDLIAQTTDWSHIARKEGLLALEERIE-----------------TL 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++++I G + ++++ EID + G P IGI+GA+
Sbjct: 104 PDPFVRKGLQLLIDG-VEPQHLRDVLEVEIDAWSAQMRLGAKIWEAAGGYAPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I M NLS P LG+ I V+ T+ G+ + + P++ ++ + ++
Sbjct: 163 MGLIHVMENLSD-PSRLGSGIAVAFAATIYGVAFANLIFLPISKKLLAHVASGVSQREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLP 266
L+ +G P++ + +
Sbjct: 222 VDGLVGIASGDNPRIIESRMQGYVS 246
>gi|229917740|ref|YP_002886386.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sp. AT1b]
gi|229469169|gb|ACQ70941.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sp. AT1b]
Length = 260
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 107/277 (38%), Gaps = 21/277 (7%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++GL + L ++GG G LI P +VI+ +A + +++
Sbjct: 5 TLVGLILGFLTLVGGMLLKGAGVAPLINPAAMVIIFVGTAAAVSIAVSKEQLQNVPKLFK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F + L + +L L +K E ++
Sbjct: 65 ILFKKQELP--SKSGLLTQFVDLSTQARKEGLLSLETALEQVEE---------------- 106
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ M M+I G Y I +M +I+ + + G P +G++GA++
Sbjct: 107 -PFLRQGMMMVIDGQPSEY-IAEVMSRDIENMEQRHKANADIFTQAGTYAPTLGVLGAVI 164
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I A+ +LS + LG AI + TL GI Y L P +++K + + ++
Sbjct: 165 GLIAALKDLSD-IEKLGHAISAAFVATLFGIFTGYVLWFPFANKLKQYSKSEVIIKEMMI 223
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ +++ +G P+ + L ER E +
Sbjct: 224 EGILSIQSGESPKTLEDKLSVYLSPKERADYEAQKEA 260
>gi|147678454|ref|YP_001212669.1| flagellar motor component [Pelotomaculum thermopropionicum SI]
gi|146274551|dbj|BAF60300.1| flagellar motor component [Pelotomaculum thermopropionicum SI]
Length = 262
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 109/270 (40%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++++GL I ++ ++ F GG+ L++P +IV G +G +++ +
Sbjct: 3 LTSLVGLAIAVVSLVAAFVLDGGHIMALLKPTAALIVFGGTIGATIVSFSFNELAAVPRL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
I K +++ + L +++ EN +
Sbjct: 63 FKVILFQKLP---DEVALIEQIVGLADKVRREGLLYLENQL-----------------PQ 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G + +M+ E+ I G P +GI+G
Sbjct: 103 IGDAFMRKGIQLVVDGT-DPELVRRIMETEMYAIQERHHSSASIFEAAGGYAPTMGILGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + NL +SP+ LG +I ++ TL G+ + P+ ++K+ K+ L +
Sbjct: 162 VMGLVHVLSNL-ESPETLGPSIALAFIATLYGVGSANVFWLPIADKLKNMSKKEIMLREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ G P + E L R
Sbjct: 221 MLEGIMSIQAGYNPILIRERLTAFLKPKGR 250
>gi|300855152|ref|YP_003780136.1| putative flagellar motor protein MotA [Clostridium ljungdahlii DSM
13528]
gi|300435267|gb|ADK15034.1| predicted flagellar motor protein MotA [Clostridium ljungdahlii DSM
13528]
Length = 263
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 21/267 (7%)
Query: 12 LCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
L ++ G G N +L+ P +I+ + + P + + L +F +
Sbjct: 14 LAVVVGMIVKGANVAVLLNPAAAIIILVGTTAAVMNSFPKEEFLNIPKILKVLFKNRKT- 72
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
D ++ L + + +K EN + N F+ +
Sbjct: 73 -DDPVAIINQLVDMSHQTRKNGLLSIENTLQSLDN-----------------EFMKKGLE 114
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M++ G Y IE +++ EI+ ++ G S P +G++GA++G+I A+GNL
Sbjct: 115 MVVDGVEPQYIIE-VLELEIENREERHRAGASTMTTAGGSAPTLGVLGAVIGLIGALGNL 173
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
+ + LG I + TL GI L Y +C+P S++K ++ R I+ ++A +G
Sbjct: 174 DDT-EKLGHMIAAAFVATLYGIFLGYVICHPFASRLKRKSQEEIRTMHIIMSGVLAIQSG 232
Query: 252 AIPQVAIEYGRKVLPLSERPSIEIVAQ 278
P+ + +LP R ++E ++
Sbjct: 233 NNPKSIEQKLVSMLPPKLRKNMEKGSE 259
>gi|170758802|ref|YP_001787973.1| chemotaxis MotA protein [Clostridium botulinum A3 str. Loch Maree]
gi|169405791|gb|ACA54202.1| chemotaxis protein MotA [Clostridium botulinum A3 str. Loch Maree]
Length = 270
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 111/276 (40%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T IGL + II G G + + + I G L ++ P+ K V
Sbjct: 6 ILTPIGLVLCFGLIIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLLVV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F + DV++ L ++ E+ I NN
Sbjct: 66 IVQTFKDNGMS---NIDVIQNFVDLSRKARREGLLSLEDAI-----------------NN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I ++M+ EID + + G PA G++G
Sbjct: 106 LTDDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ S + + +G +L T G +++ + NP+ + + + +
Sbjct: 165 LIGLIQMLANLTDS-STIASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + ++A +G P++ E L +ER + V
Sbjct: 224 VLEGVLAIQSGVNPRIMEEKLVSYLSPTERLAYNKV 259
>gi|325981886|ref|YP_004294288.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325531405|gb|ADZ26126.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 252
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++ G+ + + IIGG + GG+ L+Q +IV G +G ++ +P+KV + +
Sbjct: 11 SVAGIVLAFVAIIGGQFLEGGHVGSLLQVAAFLIVMGGTIGAVLLQSPVKVFVNGVKMVS 70
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F ++K + +K E++I P F+
Sbjct: 71 WVFYPPENSPQI---LIKQVVNWSNISRKEGMLALESYI--PAAKDAFSK---------- 115
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++++ G + ++ +++ +I + + + G P IGI+GA+L
Sbjct: 116 -----KGLQLLADG-STPEKLREVLEIDITALETHQRQSARIWEAAGGYAPTIGILGAVL 169
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P +LG+ I V+ T+ G+ L+ + P+++++K+ + + ++
Sbjct: 170 GLIHVMENLSD-PSLLGSGIAVAFVATIYGVGLANLVFLPISNKLKNIIGEHVVMQEMLM 228
Query: 243 KALIAYMNGAIPQVAIEYGRKV 264
+A NG P++ +
Sbjct: 229 DGFVAIANGENPRLIESRLKGY 250
>gi|148380180|ref|YP_001254721.1| chemotaxis protein MotA [Clostridium botulinum A str. ATCC 3502]
gi|153931827|ref|YP_001384479.1| flagellar motor protein MotA [Clostridium botulinum A str. ATCC
19397]
gi|153936340|ref|YP_001387995.1| flagellar motor protein MotA [Clostridium botulinum A str. Hall]
gi|148289664|emb|CAL83768.1| putative chemotaxis MotA protein [Clostridium botulinum A str. ATCC
3502]
gi|152927871|gb|ABS33371.1| putative chemotaxis protein MotA [Clostridium botulinum A str. ATCC
19397]
gi|152932254|gb|ABS37753.1| putative chemotaxis protein MotA [Clostridium botulinum A str.
Hall]
Length = 261
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++G+ I + +I G G N +L+ P +I+ + + + P
Sbjct: 3 IFLVLGVIIGLSAVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFPKDEFLKIPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G+ ++ + L +K E +D N
Sbjct: 63 LGVLFKEK--GKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G Y I +++ EI + + G + P +G++GA
Sbjct: 108 ----FMKKGLTMVVDGTEPGY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + LG I + TL GI Y +C+P S++K ++ I
Sbjct: 163 VVGLIGALGNLNDV-EKLGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A G PQ E +L +ER IE
Sbjct: 222 IVEGVLAIQEGVNPQKIQEKLIGMLEPNERIKIEA 256
>gi|153939356|ref|YP_001391953.1| chemotaxis MotA protein [Clostridium botulinum F str. Langeland]
gi|152935252|gb|ABS40750.1| chemotaxis MotA protein [Clostridium botulinum F str. Langeland]
gi|295319972|gb|ADG00350.1| chemotaxis MotA protein [Clostridium botulinum F str. 230613]
Length = 270
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 111/276 (40%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T IGL + II G G + + + I G L ++ P+ K V
Sbjct: 6 ILTPIGLVLCFGLIIWGMATGGSSLKVFWDLASVFITIGGSLTAMLITYPIDEFKRLLVV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F + DV++ L ++ E+ I NN
Sbjct: 66 IVQTFKDNGMS---NIDVIQNFVDLSRKARREGLLSLEDAI-----------------NN 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I ++M+ EID + + G PA G++G
Sbjct: 106 LTDDYMKKGLRMVVDG-IEPETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ S + + +G +L T G +++ + NP+ + + + +
Sbjct: 165 LIGLIQMLANLTDS-STIASGMGKALITTFYGSVMANMVFNPMGANLMFKSGVEATTREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + ++A +G P++ E L +ER + V
Sbjct: 224 VLEGVLAIQSGVNPRIMEEKLVSYLSPTERLAYNKV 259
>gi|187779119|ref|ZP_02995592.1| hypothetical protein CLOSPO_02714 [Clostridium sporogenes ATCC
15579]
gi|187772744|gb|EDU36546.1| hypothetical protein CLOSPO_02714 [Clostridium sporogenes ATCC
15579]
Length = 261
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++G+ I + +I G G N +L+ P +I+ + + + P
Sbjct: 3 IFLVLGVIIGLSAVIVGMIVKGANIAVLLNPAAAIIILVGTMAAVMNSFPKDEFLKIPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G+ ++ + L +K E +D N
Sbjct: 63 LGVLFKEK--GKGEQASIVNEIVELSKTSRKDGLLALEKIVDSMSNK------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G Y I +++ EI + + G + P +G++GA
Sbjct: 108 ----FMKKGLTMVVDGTEPGY-IREVLEIEIQSVEERHRLGASIFTTAGGAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + LG I + TL GI Y +C+P S++K ++ I
Sbjct: 163 VVGLIGALGNLNDV-EKLGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEINSMYI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A G PQ E +L +ER IE
Sbjct: 222 IVEGVLAIQEGVNPQKIQEKLIGMLEPNERIKIEA 256
>gi|323706055|ref|ZP_08117625.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534669|gb|EGB24450.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 272
Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 58/289 (20%), Positives = 117/289 (40%), Gaps = 21/289 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST++G+ + +I F GG+ LI +IV G +G + + +K + +
Sbjct: 4 STLLGILLGFGSLILAFVMEGGSVASLIGVSAALIVLGGTIGATMTSFSMKDMLKLPKLI 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ F + + Y D++K L + E + S + +L++
Sbjct: 64 GKAFKEEG---NKYGDIIKYFVYLAQKARSEGLLSLEQEL----QSDEIKNYDPILKD-- 114
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+++ A I M+ I I E + G P +GI+G +
Sbjct: 115 --------CIELVIDGADIELIRTTMENRIYIEDKELKREASIFEAAGGYSPTMGIIGTV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ +GNLS+ P LG +I V+ TL G+ ++ + P+ +++K+ + I+
Sbjct: 167 MGLVHVLGNLSE-PDKLGPSIAVAFIATLYGVSMANLVWLPIGNKLKNKAQIKKTEKEII 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV-AQEVLQYNHNKKA 289
+ ++ G P++ + + ER S+ Q V + KA
Sbjct: 226 LEGSLSLQAGENPKIVEKKLLTFV--VERESVAKAKEQSVKGEIADDKA 272
>gi|254519160|ref|ZP_05131216.1| MotA/TolQ/ExbB proton channel family protein [Clostridium sp.
7_2_43FAA]
gi|226912909|gb|EEH98110.1| MotA/TolQ/ExbB proton channel family protein [Clostridium sp.
7_2_43FAA]
Length = 260
Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 102/266 (38%), Gaps = 21/266 (7%)
Query: 12 LCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
CII GF GG L Q ++IV G +G +A P K +K F +
Sbjct: 14 ACIIVGFLLEGGALGALYQFTALLIVVGGTIGAVGVAFPGKTLKRFPKVFSIAFKKRNSN 73
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
+ ++ + +K E +++P E TFI ++
Sbjct: 74 ---LIENVEFFKKITVKTRKNGLLSLEADLNNP----------------ETDTFIKKGLQ 114
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
MI+ G ++ ++ ++ I + G P +GI+G ++G+++ + NL
Sbjct: 115 MIVDG-VDPEIMKGSLETRLEQISERHNQGISIFEAAGGYAPTMGIIGTVMGLVQVLSNL 173
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
P LG I V+ TL GI + + P+ +++K ++ + +AL+ G
Sbjct: 174 DD-PSTLGPKIAVAFIATLYGIGTANLIWLPIANKLKILSTEEIIEKEMCIEALLLVQAG 232
Query: 252 AIPQVAIEYGRKVLPLSERPSIEIVA 277
A P I L + +E
Sbjct: 233 ASPSSIISKLEGFLTEEDIKKLESSE 258
>gi|224826336|ref|ZP_03699438.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224601437|gb|EEG07618.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 249
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 107/267 (40%), Gaps = 22/267 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+II + + II G GG+ L Q +IV G ++ + K
Sbjct: 5 SIIAIIGGLAAIIVGQALEGGHIGSLFQLTAFMIVIGGTASAVMLQSTPKQFMTGLRMAR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F + ++ + + +KG E ++ +
Sbjct: 65 WVFQPPQFDHEK---TIRDVIHWSQSARKGGLLSLEGYVA-----------------QQQ 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F ++M++ G + ++M+ EI + + + + G P +GI+GA+L
Sbjct: 105 DPFHRKALQMLVDGT-EPETLRSVMEVEISMFEHARRQSTRIWESAGGYAPTMGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG+ I V+ T+ G+ + L P+ +++K+ + + ++
Sbjct: 164 GLIHVMENLSD-PSKLGSGIAVAFVATIYGVGSANLLFLPIANKLKNLVAAEIAMRELIV 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ L+A +G P++ R L + +
Sbjct: 223 EGLVAIGHGENPRIIENRLRGFLAMHD 249
>gi|168179912|ref|ZP_02614576.1| chemotaxis protein MotA [Clostridium botulinum NCTC 2916]
gi|182669295|gb|EDT81271.1| chemotaxis protein MotA [Clostridium botulinum NCTC 2916]
gi|322806478|emb|CBZ04047.1| flagellar motor rotation protein MotA [Clostridium botulinum H04402
065]
Length = 261
Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++G+ I + +I G G N +L+ P +I+ + + + P
Sbjct: 3 IFLVLGVIIGLSAVIVGMIVKGANVAVLLNPAAAIIILVGTMAAVMNSFPKDEFLKIPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G+ ++ + L +K E +D N
Sbjct: 63 LGVLFKEK--GKGEQASIVMEIVELSKTSRKDGLLALEKIVDSMSNK------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G Y I +++ EI + + G + P +G++GA
Sbjct: 108 ----FMKKGLTMVVDGTEPGY-IREVLEIEIQTVEERHRLGASIFTTAGGAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + LG I + TL GI Y +C+P S++K ++ I
Sbjct: 163 VVGLIGALGNLNDV-EKLGHMIAGAFVATLYGIFFGYVVCHPFASRLKRKSHEEISSMYI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A G PQ E +L +ER IE
Sbjct: 222 IVEGVLAIQEGVNPQKIQEKLIGMLEPNERIKIEA 256
>gi|71906383|ref|YP_283970.1| flagellar motor protein [Dechloromonas aromatica RCB]
gi|71846004|gb|AAZ45500.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
Length = 246
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 22/263 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++ G+ I + IIGG GG+ L+QP ++IV G LG ++ +P+ + +
Sbjct: 5 SLAGIAIGLFAIIGGQILEGGHVGSLVQPTALLIVLGGTLGAVLLQSPIHIFRRGMKMAK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
++ + Q +++ + ++ EN+I +
Sbjct: 65 WVWVPPVIEQKR---LIEQILNWSQLSRREGLLALENYIPAIKD---------------- 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F +++++ G A I L++ EI+ E + G P IGI+GA++
Sbjct: 106 -EFARRGLQLLVDG-ADPERIRELLEVEINTFEDEWRQSAKIWEAAGGYSPTIGILGAVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG I V+ T+ G+ L+ + P+ +++K L+ ++
Sbjct: 164 GLIHVMENLSD-PTKLGAGIAVAFVATIYGVGLANLVYLPIAAKLKYYILRMVSTREMLV 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVL 265
L+ G P++ + L
Sbjct: 223 DGLVGIAVGDNPRIIEGRLKGYL 245
>gi|89893040|ref|YP_516527.1| flagellar motor protein MotA [Desulfitobacterium hafniense Y51]
gi|89332488|dbj|BAE82083.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 263
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 56/285 (19%), Positives = 118/285 (41%), Gaps = 24/285 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST+IGL + + + G G + LI P I+I+ + + P++ +K
Sbjct: 3 LSTLIGLLLGFIAVGVGMILKGASLTALINPAAILIIIVGTIATIFIGFPMEDLKRVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + L + +++K ++ EN +++ +
Sbjct: 63 FKILFTKQQLI--SKKELVKQFAEWTTVSRREGILSLENRLEEIND-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ M M I GN + I +++ E+I + + MG P +G++GA
Sbjct: 107 ---DFLKKGMGMAIDGNDAEF-IRDVLFEDISAMEERHRDGALVFTQMGTYAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+ NL++ + LG I + TLLGI Y L +P+ +++K ++ + +
Sbjct: 163 VVGLISALSNLNEV-EALGHLISAAFVATLLGIFTGYVLWHPMANKLKLFSRREAEIKRM 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+ + +++ G L +ER + +E+
Sbjct: 222 MLEGILSIQAGDNVNAIHNKLFAYLSAAER---RELTEEMGNEKA 263
>gi|315649792|ref|ZP_07902875.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
gi|315274766|gb|EFU38147.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
Length = 264
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 112/264 (42%), Gaps = 22/264 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ I G+ + +IGGF GG+ L+Q +IV G + +++ P ++ +
Sbjct: 3 ITIIFGILAGLAALIGGFLWEGGHLSGLLQGAAALIVFGGTIAAVIVSFPATRLRTIPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L FG + D + + ++ E + ++
Sbjct: 63 LKLAFGRSERSSEKLIDDIVDMS---VTARRDGVLALE----------------RISADH 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + M+M++ GN + +++ +I+ + G P +GI+G
Sbjct: 104 E-DPFLREGMQMVVDGN-DPEMVRQILELDINAAEQKHEGYAKIFESAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +G+L Q P LG +I V+ T TL G+ + + P+ S+IK+ ++ +
Sbjct: 162 VMGLIHVLGSL-QDPTNLGPSIAVAFTATLYGVASANIIFLPIASKIKARSEEEIANMEL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
+ + ++A NG P + +
Sbjct: 221 LLEGIMAVQNGEHPLLVRKKLASF 244
>gi|289523563|ref|ZP_06440417.1| chemotaxis protein PomA [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503255|gb|EFD24419.1| chemotaxis protein PomA [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 245
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 111/266 (41%), Gaps = 23/266 (8%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
+ GG A GG+ I ++IV G LGG +++NP K + G L + F ++
Sbjct: 1 MVAGGIVA-GGDTGAFINLPSLLIVVGGALGGTILSNPWKRVLSLGQILKKAFFSESP-- 57
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+++ + ++ E+ + + F+ +++
Sbjct: 58 -ELISIVQTMVSFAEKARREGLLSLEDDAEQLDD-----------------PFMRKSIQL 99
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G +++++D EI ++ E PA G++G ++G+I+ +GNL+
Sbjct: 100 VVDGT-DPELVKSILDTEIGLLEERHAGNKFMFDTFAELAPAFGMLGTLIGLIQMLGNLN 158
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
P LG + V+L T G +++ P+ ++ ++ +V + ++A G
Sbjct: 159 D-PDALGPGMAVALITTFYGSMMANIFGIPIARKLTVRTQEEVMTREMVVEGILAIQAGE 217
Query: 253 IPQVAIEYGRKVLPLSERPSIEIVAQ 278
P++ E + LP R + E +
Sbjct: 218 NPRLVEERLKVFLPPKFREAFEEKEE 243
>gi|90021804|ref|YP_527631.1| flagellar motor protein [Saccharophagus degradans 2-40]
gi|89951404|gb|ABD81419.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 246
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +++G+ I ++GG + GGN L+ ++V G LG ++ P IK S
Sbjct: 3 ILSVVGVIIGFAALLGGNFLEGGNWTSLVNGPAALVVVGGTLGAAILQTPYSGIKRSLTL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
IF L + +K + +K EN + +S
Sbjct: 63 FKWIFKPPRL---HFKSGIKQVVSWAMAARKEGLLGLENIAEKEKDS------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F +++++ G + + I ++M+ ++ + MG P IGI+GA
Sbjct: 107 ----FAKKGLQLLVDG-SETDVIRHVMETDLIVAEQRDHDAVQFYESMGGYAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M NL+ P LG I ++ T+ G+ + P+ +++K+ +Q + +
Sbjct: 162 VMGLIHVMQNLAD-PAELGPGIAIAFVATIYGVAFANLFLLPVANKLKACIKQQSQFREL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ + +IA +G P+V L
Sbjct: 221 LVEGIIAIADGENPKVIEMKLSGYL 245
>gi|83647834|ref|YP_436269.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83635877|gb|ABC31844.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 245
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I+G+ I ++ IIGG GG+ L+ +IV G LG V+ + KV+K S
Sbjct: 3 LLSIVGVLIALVAIIGGNLIEGGDVSSLLNLPAALIVIGGTLGAIVLQHSGKVLKRSFTQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F L + D ++ + +K E+ +
Sbjct: 63 FIWVFLPPYLSFE---DGIQKVISWSMVARKEGLLGLES-----------------VAEK 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F +++++ G A I ++M+ E++ +L MG P +GI+GA
Sbjct: 103 ERDPFSRKGLQLLVDG-AEPESIRSIMELELNSREQRELDASKVYEAMGGYAPTLGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ M +L + P +LG I + T+ G+ L+ P+ +++K +Q L +
Sbjct: 162 VLGLIQVMSHL-EDPSMLGPGIATAFVATIYGVALANLFYFPIANKLKGIVQEQSLLREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ + ++ G P+ + L
Sbjct: 221 MIEGIVGIAEGENPKAIELKLKGFL 245
>gi|88704269|ref|ZP_01101983.1| chemotaxis motA protein [Congregibacter litoralis KT71]
gi|88701320|gb|EAQ98425.1| chemotaxis motA protein [Congregibacter litoralis KT71]
Length = 267
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 106/264 (40%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
T++G+ + + I+GG + GG+ L+Q VIV G G ++ PL+ + + L
Sbjct: 25 LTLLGVTLAVGAILGGNWLEGGHISALLQLTAFVIVIGGTFGAVLIQTPLRDFRGALGRL 84
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A ++ VL ++ E + E
Sbjct: 85 RWVLLPPAFDREA---VLGKTIEWSRIARRDGLLALEERV-----------------GKE 124
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+++++ G I +MD EID L + + MG P IGI+GA+
Sbjct: 125 PDNLTQKGLQLLVDG-LEPEAIRTVMDVEIDNALAKDARAAKVYEAMGGYSPTIGIIGAV 183
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NLS P LG I V+ T+ G+ + L P+ +++++ Q + + +V
Sbjct: 184 LGLIDVMNNLSD-PTQLGAGIAVAFVATIYGVGFANLLYLPIANKLRAVSGDQMQYHEMV 242
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +G PQ L
Sbjct: 243 VDGIAMIADGDNPQTIQNKLEGYL 266
>gi|120554887|ref|YP_959238.1| flagellar motor protein [Marinobacter aquaeolei VT8]
gi|120324736|gb|ABM19051.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 246
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 108/266 (40%), Gaps = 22/266 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +++G+ + + I+GG GG L +IV G L ++ ++K +
Sbjct: 3 ILSLLGIILAFVAILGGNLLEGGAVSSLFNGPAGLIVVGGTLAATILQTSWPMLKRAFGQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + D + + +K E L
Sbjct: 63 VRWVFIPPYISLE---DGIGKVIDWSVKARKQGLLGLEG-----------------LAER 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F +++++ G A I ++M+ +++ L+ MG P IGI+GA
Sbjct: 103 EPEPFARKGLQLLVDG-AEPESIRSIMEVDLETREQRDLESARVYEAMGGYSPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ M NL + P+ LG I + T+ G+ L+ L P+ ++++ ++ R +
Sbjct: 162 VMGLIQVMTNL-EDPQSLGGGIATAFVATIYGVALANLLFFPVANKLRGIIKERTRYEDM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLP 266
+ +IA G P+ R L
Sbjct: 221 MIDGIIAIAEGENPKSIELRLRGFLQ 246
>gi|302037672|ref|YP_003797994.1| flagellar motor protein MotA [Candidatus Nitrospira defluvii]
gi|300605736|emb|CBK42069.1| Flagellar motor protein MotA [Candidatus Nitrospira defluvii]
Length = 256
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ I I I+GG GG+ ++Q +IV G +G + NPL V+ S
Sbjct: 3 IATILGVVIAIGSILGGQALEGGHVGSVLQLTAFIIVMGGTIGACCVQNPLSVVLKSISM 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + L +K E I D ++
Sbjct: 63 VSLALTNPPH---DVKGTITQILDLANVSRKQGLLALEGKIKDLHD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F +++I+ G ++ +++ E++ E + G P +GI+GA
Sbjct: 106 ---PFFKKGIQLIVDGT-DPKLLQEILEIEVEHHEEEGVHAAKVWEAAGGYAPTVGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NL+ P LG I V+ T+ G+ + P+ +++K ++ L +
Sbjct: 162 VLGLIHVMENLAD-PSKLGGGIAVAFVATVYGVGAANLFFLPIGNKMKFKLKEEAGLRTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V L+ G P++ E LP ER
Sbjct: 221 VIMGLVGLAQGENPRLLQEKLESFLPPHER 250
>gi|254517025|ref|ZP_05129083.1| chemotaxis MotA protein [gamma proteobacterium NOR5-3]
gi|219674530|gb|EED30898.1| chemotaxis MotA protein [gamma proteobacterium NOR5-3]
Length = 265
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
T++G+ + + I+GG + GG+ LIQ VIV G LG ++ PL+ +++
Sbjct: 23 LTLLGVTMAVGAILGGNWLEGGHLSALIQLTAFVIVIGGTLGAVLVQTPLRDFREALRRF 82
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + + VL ++ E + E
Sbjct: 83 SWVLLPPSYDRQA---VLAKTIEWSRVARRDGLLALEQRV-----------------GKE 122
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G I +MD EID + + + MG P IGI+GA+
Sbjct: 123 PDSLTQKGLQLLVDG-LEPEAIRTVMDVEIDNAMAKDARAAKVYDAMGGYSPTIGIIGAV 181
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NLS P LG I V+ T+ G+ + P+ +++++ Q + + +V
Sbjct: 182 LGLIDVMNNLSD-PAQLGAGIAVAFVATIYGVGFANLFYLPIANKLRAISGDQMQYHEMV 240
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +G PQ +
Sbjct: 241 VDGIAMIADGDNPQAIQSKLEGYI 264
>gi|319651876|ref|ZP_08006000.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
gi|317396435|gb|EFV77149.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
Length = 272
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/289 (20%), Positives = 116/289 (40%), Gaps = 24/289 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M T GL + + +I G GG + P I+IV G + G +++ PLK I+
Sbjct: 6 MLTPAGLMVGLAMLIFGIMWNGGADGFLSFVDPSSILIVLGGLIAGLLVSFPLKDIRHMA 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
++F + + +++ + L ++ E I
Sbjct: 66 TVFKQVFSSEE---QSVGELIGIFVKLSERARREGLLSLEAEI----------------- 105
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
FI + + + G I ++M+ EI + K + GE PA G++
Sbjct: 106 GKVEDPFIQKGVYLAVDG-IEPDVITDIMNAEIMAMEERHRKGRSILERAGEYAPAWGMI 164
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ + NL+ P LG + ++L TL G +L+ + P+ +++ K+ L
Sbjct: 165 GTLIGLVLMLKNLND-PSTLGPNMALALLTTLYGSLLANLIFLPMAAKLALKTEKEVFLK 223
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
I+ + +I +G P++ E L ER ++ E ++
Sbjct: 224 QIIIEGVIGVQSGQNPRILEEKLSAFLSSEERRDLDKAVNEEEALDNEA 272
>gi|167034900|ref|YP_001670131.1| flagellar motor protein [Pseudomonas putida GB-1]
gi|166861388|gb|ABY99795.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
Length = 246
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ LI +IV G L ++ +PL K + L
Sbjct: 4 LSLIGLILAFVAIVGGNFLEGGHVGALINGPAALIVLGGTLAAALLQSPLSSFKRALQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E+ + ++E
Sbjct: 64 RWILFPPRVDLAGGID---RVVNWSLTARKEGLLGLES-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEAIRSILEVDFLTQEARDIQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG I V+ T+ G+ + + P+ +++K+ ++Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLILLPIANKLKANVMRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|218290400|ref|ZP_03494530.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
LAA1]
gi|218239528|gb|EED06722.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
LAA1]
Length = 265
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 102/253 (40%), Gaps = 22/253 (8%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
+ GN LIQP ++IV G LG ++++PLKV L F D
Sbjct: 20 YILDKGNIAALIQPSAMMIVFGGTLGATMLSSPLKVFLSLPKYLRIAFFAPKRDPRAQID 79
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
L L ++ E+H+ N+ F+ + +R+I+ G
Sbjct: 80 ---QLVDLAVMARREGILALEDHV-----------------NSFDDAFMRNGVRLIVDG- 118
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+++++ E+ I + G P +GI+G ++G++ +G+LS +
Sbjct: 119 IDPELVKDMLQTELAHIEERHEVGINMFEAAGGFAPTMGIIGTVMGLVHVLGSLS-NVSS 177
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
LG I + TL G+ + P+ +++++ ++ + + +++ G P V
Sbjct: 178 LGPEIATAFIATLYGVASANIFWLPVANKLRARSQEEMLEREMTLEGILSIQAGENPNVL 237
Query: 258 IEYGRKVLPLSER 270
+ L S+R
Sbjct: 238 RQKLLSFLAASDR 250
>gi|172058883|ref|YP_001815343.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sibiricum 255-15]
gi|171991404|gb|ACB62326.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sibiricum 255-15]
Length = 261
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 112/267 (41%), Gaps = 21/267 (7%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
++GG G +P L+ P +VI+ +++ P + +K IF + L
Sbjct: 16 LVGGMILKGASPIALLNPAALVIIFVGTAAAIMISFPKERLKIIPALFKVIFFEQQLM-- 73
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
T +L+ L +K E +++ N F+ + M+
Sbjct: 74 TKQTLLQQFLTLSTQARKEGLLSLETALEEVDN-----------------AFMRRGVMMV 116
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
I G Y +E++M +++ + + + G P +G++GA++G++ A+ +LS
Sbjct: 117 IDGQPSEY-VEDVMTRDLENMTERHHANANIFTQAGTYAPTLGVLGAVVGLVAALSDLSD 175
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+ LG AI + TL GI Y L P +++K + +LY ++ + +++ NG
Sbjct: 176 -IEKLGHAISGAFIATLFGIFTGYVLWFPFATKLKQKSATEIQLYEMMIEGILSIQNGES 234
Query: 254 PQVAIEYGRKVLPLSERPSIEIVAQEV 280
P+ + L ER + E +
Sbjct: 235 PKNLEDKLLVYLTPKERATYETEKEAA 261
>gi|188586028|ref|YP_001917573.1| MotA/TolQ/ExbB proton channel [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350715|gb|ACB84985.1| MotA/TolQ/ExbB proton channel [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 266
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 111/286 (38%), Gaps = 23/286 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + +IG + G N I +IV G + +++ P+ +
Sbjct: 3 IATIIGLIAGVFLLIGAVFLEG-NVDIFFNIPSALIVIGGTVAATLISYPINQFFSIVKT 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F K++ + + LL L ++
Sbjct: 62 VQNAFKVKSMNP---TETINLLVNLAEKARREGLLAL-----------------EDDVEE 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G + ++++ E+ + MG PA G+ G
Sbjct: 102 MDDDFLKKGVQLVVDGT-DPELVRSILETELSFQEERHKIGQNIFRTMGTFSPAFGMSGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + +L P +G + ++L TL G++ + + P+ ++++ + L +
Sbjct: 161 LIGLVSMLDDLDD-PDAIGPGMALALLTTLYGVVAANLIFLPIANKLEVKSNDEILLKEV 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+ + +++ G P++ E + L R I +EV+ N
Sbjct: 220 MLEGMLSIQAGENPRIVEEKLKAFLAPKSRDEIAEEDEEVVDANAE 265
>gi|256833231|ref|YP_003161958.1| MotA/TolQ/ExbB proton channel [Jonesia denitrificans DSM 20603]
gi|256686762|gb|ACV09655.1| MotA/TolQ/ExbB proton channel [Jonesia denitrificans DSM 20603]
Length = 261
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 62/279 (22%), Positives = 109/279 (39%), Gaps = 22/279 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IGL I II G +P + P +V+V A G + L+ + L
Sbjct: 4 ASLIGLAIGFGAIIMAILLEGASPMSVFLPAPMVLVFLATFGVAMAGGTLRDTIYALKQL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F K D + L ++ E+ D N
Sbjct: 64 PAAFTRKPSNAAASVDTI---VSLAEQARREGLLALEDAAKDIEN--------------- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ D +R I G ++ ++++++I E Y MG P IGIVG +
Sbjct: 106 --DFLRDGLRSAIDGT-DPEDLRDILEDKIAAKRAEDKVGYKFYDDMGGYAPTIGIVGTV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+ ++ + NL+ P LG I + T GI + + P+ S++K + I+
Sbjct: 163 VSLVHVLENLAD-PSELGHMIAAAFLATFWGIFTANVMWLPIGSRLKRISNLECDEMEII 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ L+A G+ P++ E R ++P + P VA+E
Sbjct: 222 LEGLLAVQAGSNPRLVGERLRSLIPSTSAPPAPKVAKEA 260
>gi|15596657|ref|NP_250151.1| flagellar motor protein [Pseudomonas aeruginosa PAO1]
gi|116049405|ref|YP_791792.1| flagellar motor protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|254234558|ref|ZP_04927881.1| MotC [Pseudomonas aeruginosa C3719]
gi|296390173|ref|ZP_06879648.1| flagellar motor protein [Pseudomonas aeruginosa PAb1]
gi|313106459|ref|ZP_07792690.1| chemotaxis protein MotC [Pseudomonas aeruginosa 39016]
gi|9947412|gb|AAG04849.1|AE004575_8 MotC [Pseudomonas aeruginosa PAO1]
gi|3721572|dbj|BAA33551.1| ORF1 [Pseudomonas aeruginosa]
gi|115584626|gb|ABJ10641.1| chemotaxis protein MotC [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166489|gb|EAZ52000.1| MotC [Pseudomonas aeruginosa C3719]
gi|310879192|gb|EFQ37786.1| chemotaxis protein MotC [Pseudomonas aeruginosa 39016]
Length = 246
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++G+ + + I+GG + GG+ L+ +IV G L ++ P+ V+K L
Sbjct: 4 LSLVGIILAFVAIVGGNFLEGGHAGALLNGPAALIVIGGTLAAALLQTPVNVLKRGLGML 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F +D + +++ M +K E+ + + E
Sbjct: 64 GWVFFPPR--EDLSGGIDRIVSWSMT-ARKEGLLGLES-----------------IADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ ++ L+ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEVIRSILEVDLFTQESRDLQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ +P LG+ I V+ T+ G+ + L P+ +++K+ L+Q R ++
Sbjct: 163 MGLIHVMGNLA-NPAQLGSGIAVAFVATIYGVGFANLLLLPIGNKLKTLVLRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|49089296|gb|AAT51667.1| PA1460 [synthetic construct]
Length = 247
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++G+ + + I+GG + GG+ L+ +IV G L ++ P+ V+K L
Sbjct: 4 LSLVGIILAFVAIVGGNFLEGGHAGALLNGPAALIVIGGTLAAALLQTPVNVLKRGLGML 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F +D + +++ M +K E+ + + E
Sbjct: 64 GWVFFPPR--EDLSGGIDRIVSWSMT-ARKEGLLGLES-----------------IADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ ++ L+ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEVIRSILEVDLLTQESRDLQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ +P LG+ I V+ T+ G+ + L P+ +++K+ L+Q R ++
Sbjct: 163 MGLIHVMGNLA-NPAQLGSGIAVAFVATIYGVGFANLLLLPIGNKLKTLVLRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|311695187|gb|ADP98060.1| chemotaxis protein MotA [marine bacterium HP15]
Length = 248
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 108/266 (40%), Gaps = 22/266 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +++G+ + I+GG GG L +IV G L ++ ++K +
Sbjct: 5 ILSLLGVILAFAAILGGNLLEGGAVGSLFNGPAAIIVIGGTLAATILQTSWPMLKRAFTQ 64
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + D + + +K E L
Sbjct: 65 VRWVFFPPFINLE---DGIGKVIDWSVKARKQGLLGLEG-----------------LAER 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F +++++ G A + I +M+ +++ L+ MG P IGI+GA
Sbjct: 105 EPEPFARKGLQLLVDG-AETETIRGIMEVDLESREQRDLESAKVFEAMGGYSPTIGIIGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ M NL + P+ LG+ I + T+ G+ L+ L P+ ++++ ++ R +
Sbjct: 164 VMGLIQVMTNL-EDPQSLGSGIATAFVATIYGVALANLLFFPVANKMRGIVRERTRYEDM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLP 266
+ LIA G P+ R L
Sbjct: 223 MIDGLIAIAEGENPKSIELRLRGFLQ 248
>gi|149376620|ref|ZP_01894380.1| flagellar motor protein MotC [Marinobacter algicola DG893]
gi|149359138|gb|EDM47602.1| flagellar motor protein MotC [Marinobacter algicola DG893]
Length = 245
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +++G+ + + I+GG GG L +IV G L ++ ++K +
Sbjct: 3 ILSLLGVILAFVAILGGNLLEGGAISSLFNGPAALIVIGGTLAATILQTSWPLLKRAFSQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + D + + +K E L
Sbjct: 63 VRWVFFPPYISLE---DGIGKVIDWSVKARKQGLLGLEG-----------------LAEK 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F +++++ G A + I ++M+ +++ L+ MG P IGI+GA
Sbjct: 103 ESERFARKGLQLLVDG-AETETIRSIMEVDLESREQRDLESARVFEAMGGYSPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ M NL + P+ LG+ I + T+ G+ L+ L P+ ++++ ++ R +
Sbjct: 162 VMGLIQVMTNL-EDPQSLGSGIATAFVATIYGVALANLLFFPVANKLRGILRERTRYEDM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ +IA +G P+ R L
Sbjct: 221 MIDGIIAIADGENPKSIELRLRGFL 245
>gi|258510422|ref|YP_003183856.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477148|gb|ACV57467.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 265
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 100/253 (39%), Gaps = 22/253 (8%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
+ GN LIQP ++IV G LG ++++ LKV L F D
Sbjct: 20 YILDKGNIAALIQPSAMMIVFGGTLGATMLSSSLKVFLSLPKYLRIAFFAPKRDPRAQID 79
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
L L ++ E+H+ N+ F+ + +R+I+ G
Sbjct: 80 ---QLVDLAVMARREGILALEDHV-----------------NSFDDAFMRNGVRLIVDG- 118
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+++++ E+ I + G P +GI+G ++G++ +G+LS
Sbjct: 119 IDPELVKDMLQTELAHIEERHEVGINMFEAAGGFAPTMGIIGTVMGLVHVLGSLSDV-SS 177
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
LG I + TL G+ + P+ +++++ ++ + + +++ G P V
Sbjct: 178 LGPEIATAFIATLYGVASANIFWLPVANKLRARSQEEMLEREMTLEGILSIQAGENPNVL 237
Query: 258 IEYGRKVLPLSER 270
+ L S+R
Sbjct: 238 RQKLLSFLAASDR 250
>gi|150016470|ref|YP_001308724.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
gi|149902935|gb|ABR33768.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
Length = 257
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 107/269 (39%), Gaps = 21/269 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ TI+ + +CII GF GG P L+QP +IV G LG ++ P +K
Sbjct: 3 IMTILSVLFAFICIIVGFIIEGGKPIALLQPTAAMIVIGGTLGAVGISFPSSTLKKFPKV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F K + Y D K + + ++ E+ L ++
Sbjct: 63 LSIAFKKKEIDLKGYIDYFKGVSL---KTRRDGLLSLESE----------------LTDD 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L F+ ++M++ G ++++++ +++ + + G P +GIVG
Sbjct: 104 ALDPFVKKGLQMVVDG-IDPSSVKSILNTKLEQLSTRHENCIEMFTSAGGYAPTMGIVGT 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
I ++ + LS +G I V+ TL G+ + P+ S+++ ++ +
Sbjct: 163 ITSLVIILSALSDV-AAMGEKIAVAFVATLYGLATANLFWLPIASKLREINKEEIAEKEM 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A++ G P + L E
Sbjct: 222 IIEAVLLIQEGVNPNTLVSKLVSYLTEDE 250
>gi|255017133|ref|ZP_05289259.1| flagellar motor protein MotA [Listeria monocytogenes FSL F2-515]
Length = 246
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 20/264 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + DVL +++ E+ +D+ +
Sbjct: 63 FKILFTKEKMP--DKVDVLVQYKEYADEIRRSGVLALEDSVDEIED-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ MR+++ G + + ++++EE+ + + G P +G++GA
Sbjct: 107 ---PFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L P +++K K+ L +
Sbjct: 164 AMGLIHAMGEMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
+ + ++A P+V E
Sbjct: 223 MIEGVVALQERNAPRVVEERLLSF 246
>gi|34496476|ref|NP_900691.1| flagellar motor protein [Chromobacterium violaceum ATCC 12472]
gi|34102330|gb|AAQ58696.1| chemotaxis motA protein [Chromobacterium violaceum ATCC 12472]
Length = 249
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 22/267 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++I + + + II G GG+ L+Q +IV G ++ + K L
Sbjct: 5 SLIAIVMGLTAIIAGQAIEGGSIGSLMQLTAFMIVIGGTTSAVMLQSTPKQFMAGLRMLR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
IF + +++ + +KG E I +
Sbjct: 65 WIFRPPNFDHEK---MIREVINWSQTSRKGGLLALEGLIA-----------------TQR 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F M+M++ G + +M+ EI + + + + G P +GI+GA+L
Sbjct: 105 DPFTKKAMQMLVDGT-EPDTLRAVMEVEISMFEHARRQAARIWESAGGYAPTMGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG I V+ T+ G+ + P+ +++K + + +V
Sbjct: 164 GLIHVMENLSD-PSKLGGGIAVAFVATVYGVGSANLFFLPMANKLKHLVASELAMKELVV 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ ++A NG P++ R L + E
Sbjct: 223 EGVVAIANGENPRIIESRLRGFLAMHE 249
>gi|104782796|ref|YP_609294.1| flagellar motor protein [Pseudomonas entomophila L48]
gi|95111783|emb|CAK16507.1| flagellar motor protein MotA [Pseudomonas entomophila L48]
Length = 246
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ LI +IV G L ++ +PL K + +
Sbjct: 4 LSLIGLILAFVAIVGGNFLEGGHAGALINGPAALIVLGGTLAAALLQSPLSSFKRALQIV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF + D + +K E + + E
Sbjct: 64 RWIFFPPRVDLAGGID---RVVNWSLTARKEGLLGLEG-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEAIRSILEVDFLTQEARDIQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG I V+ T+ G+ + + P+ +++K+ L+Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLILLPIANKLKAVTLRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|107100894|ref|ZP_01364812.1| hypothetical protein PaerPA_01001924 [Pseudomonas aeruginosa PACS2]
gi|218892667|ref|YP_002441536.1| flagellar motor protein [Pseudomonas aeruginosa LESB58]
gi|254239809|ref|ZP_04933131.1| MotC [Pseudomonas aeruginosa 2192]
gi|126193187|gb|EAZ57250.1| MotC [Pseudomonas aeruginosa 2192]
gi|218772895|emb|CAW28707.1| MotC [Pseudomonas aeruginosa LESB58]
Length = 246
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++G+ + + I+GG + GG+ L+ +IV G L ++ P+ V+K L
Sbjct: 4 LSLVGITLAFVAIVGGNFLEGGHAGALLNGPAALIVIGGTLAAALLQTPVNVLKRGLGML 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F +D + +++ M +K E+ + + E
Sbjct: 64 GWVFFPPR--EDLSGGIDRIVSWSMT-ARKEGLLGLES-----------------IADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ ++ L+ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEVIRSILEVDLFTQESRDLQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ +P LG+ I V+ T+ G+ + L P+ +++K+ L+Q R ++
Sbjct: 163 MGLIHVMGNLA-NPAQLGSGIAVAFVATIYGVGFANLLLLPIGNKLKTLVLRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|292493579|ref|YP_003529018.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582174|gb|ADE16631.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 246
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 113/265 (42%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I+G+ I II G Y GG ++ P ++IV G LG ++ PLK+ +
Sbjct: 3 ILSILGVIIGFGAIIVGQYLEGGELSAILNPVALLIVLGGTLGAVMLQTPLKLFLRAFQI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + +++ + ++ E +
Sbjct: 63 SGWVFRPPSQRAE---ELIVNILEWSKIARREGLLGLET-----------------IAET 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E+ F +++++ GN +I +++ +I++ L MG P IGI+GA
Sbjct: 103 EVDRFSRRGLQLLVDGN-EPEDIRKILELDIELAERRDLLAAKVFESMGGYAPTIGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ MGNL+ P LG+ I V+ T+ GI L+ P +++K + + +
Sbjct: 162 VMGLIQVMGNLAD-PSSLGSGIAVAFVATIYGIGLANLFFLPFANKLKVLIRGRSYISEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
V + LI G P+ + + L
Sbjct: 221 VVEGLIGIAEGENPRNIEVHLQSYL 245
>gi|322649510|gb|EFY45943.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
Length = 174
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 65/174 (37%), Positives = 99/174 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADT 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+ FI DY+R+II GN +EIE LMDEEI+ E P ++++ +G+SLPA
Sbjct: 121 VMLDFIVDYLRLIISGNMNPFEIEALMDEEIETHESEAEVPANSLAMVGDSLPA 174
>gi|254785496|ref|YP_003072925.1| flagellar motor protein [Teredinibacter turnerae T7901]
gi|237683897|gb|ACR11161.1| transporter, MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
Length = 246
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 111/265 (41%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +++G+ I ++GG + GG+ L +IV G +G ++ P+ +K +
Sbjct: 3 LLSVLGVVIGFAALLGGNFIEGGSWGSLANGPAALIVIGGTIGAAMLQTPMAGLKRALSL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
IF + + + + + ++ EN +
Sbjct: 63 FKWIFKPPRV---QFKQGITRVVGWAKSARRDGLLGLEN-----------------IAER 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F +++++ G + I ++++ ++ + + MG P IGI+GA
Sbjct: 103 ERDKFCRKGLQLLVDG-SEPEVIRHVLETDLIVAEQRDSEAVQFYESMGGYAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M +LS +P LG I ++ T+ G+ + L P+ +++K+ +Q + +
Sbjct: 162 VMGLIHVMQHLS-NPAELGPGIAIAFVATIYGVAFANLLLLPIANKLKACIRQQSQYREL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ + +I+ +G P+ L
Sbjct: 221 LIEGIISIADGENPRAIEMKLSGYL 245
>gi|326792988|ref|YP_004310809.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
gi|326543752|gb|ADZ85611.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
Length = 264
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 111/273 (40%), Gaps = 20/273 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S I+ L + + GF GG+ L +IV G +G ++ P++ IK
Sbjct: 3 LSIIVFLVFSFGALFLGFILEGGHLLALFIGTAAIIVFGGTIGAVGLSFPMEEIKRLPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F YK + D Y + K Y L + E+ N
Sbjct: 63 IGVLFNYKPI--DNYK-ITKQFYELTTIARAEGILALEDA---------------AGRNG 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
I +R+I+ G ++ I + + + I + G P +GI+G
Sbjct: 105 IKHPLITKGLRLIVDGVDTNH-IYKSLVTDAENIDARHEAGFAIFESAGGYSPTMGIIGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNLS P LG I V+ TL G+ + L P+ +++K+ K+ +
Sbjct: 164 VMGLVHVLGNLSD-PSTLGPKIAVAFIATLYGVGTANLLWLPIATRLKNISEKESLSNQM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
V AL+A G P++ I+ L ER +
Sbjct: 223 VINALVALQQGKHPKLVIDDMSAFLTQEEREKV 255
>gi|253996641|ref|YP_003048705.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253983320|gb|ACT48178.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 249
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 103/263 (39%), Gaps = 22/263 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + + II G GGN L+Q +IV G ++ P K L
Sbjct: 5 SLIGLILAVAGIILGQKLEGGNVGSLLQYAAFLIVMFGTFGAVLVQTPAKTFIQGLKMLK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F D ++ K + I +K E + E
Sbjct: 65 LVFKKPI---DDKKELSKRILIWSNFARKEGIFMLEPFLK-----------------KET 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
FI MR++I G +I + +I + G P +GI+GA+L
Sbjct: 105 DPFIIKGMRLMIDGT-PPEKIREICAIDIYFHEVQMRSAAKIWDAAGGYAPTVGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG+ I V+ T+ G+ + + P+ +++K+ + + ++
Sbjct: 164 GLIHVMENLSD-PSKLGSGIAVAFVATIYGVGFANLIFLPIANKLKTYIQAELKRREMLL 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVL 265
A ++ NG P++ E L
Sbjct: 223 NAWVSIANGDHPRIVEERLDSYL 245
>gi|327481243|gb|AEA84553.1| flagellar motor protein [Pseudomonas stutzeri DSM 4166]
Length = 246
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ L+ +IV G LG ++ P+ V +
Sbjct: 4 LSLIGLLLAFVAIVGGNFLEGGHISALLNGPAALIVLGGTLGAVLLQTPIAVFMRAMGIA 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF + + ++ +K E + E
Sbjct: 64 RWIFFPPRI---DLARGILMVTTWSNTARKEGLLGLEP-----------------VAETE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ ++ L+ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEVIRSILEVDLYTQESRDLRAAKVYESMGGYSPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ + L P+ +++KS +Q ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAFANLLVLPIGNKLKSVVQRQTAYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P+ + +
Sbjct: 222 LEGVLSIAEGENPRSIEMKLQGFM 245
>gi|332296624|ref|YP_004438547.1| MotA/TolQ/ExbB proton channel [Thermodesulfobium narugense DSM
14796]
gi|332179727|gb|AEE15416.1| MotA/TolQ/ExbB proton channel [Thermodesulfobium narugense DSM
14796]
Length = 264
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 110/279 (39%), Gaps = 22/279 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ G I I+ GG+ + V+V G G V+ + +K
Sbjct: 3 IATVAGFAIAFGSIMLSVIIEGGSFSHYLSLPAFVLVLGGTTGAVVINTTVDQLKMVPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F +D V+ + L ++ E ++
Sbjct: 63 VRKAFFAP---KDNPVTVIDQIVRLAEKARREGLLSLEAELE-----------------G 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ + +++ +++I+ + +G P +GI+G
Sbjct: 103 VDDMFMKRGVQLVVDA-VDPELVRAILENDLEIMEARHKLGENFFVGLGGFAPTLGILGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + NL + P + AI + TL G+ ++ + P+ ++ ++ ++ +
Sbjct: 162 VMGLVHMLANL-EDPSGVSQAIAGAFIATLYGVGVANLVFLPIAGKLGVRSKEETQIKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ + +++ G P++ E + LP + R + E ++
Sbjct: 221 IMEGILSIQAGDNPRIIEEKLKVFLPPTLRLAYEAQKEK 259
>gi|261409602|ref|YP_003245843.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
gi|261286065|gb|ACX68036.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
Length = 264
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 22/264 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ I+G+ + +IGGF GG+ L+Q +IV G +++ P ++ +
Sbjct: 3 ITIILGILAGLAALIGGFLWEGGHLSGLLQGAAALIVFGGTFAAVIVSFPATRLRTIPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L FG D D + + ++ E +
Sbjct: 63 LKLAFGRSNRSTDELIDAIVDMS---VTARRDGVLALER-----------------ISAE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M+M++ GN + +++ +I+ + G P +GI+G
Sbjct: 103 HEDPFLREGMQMVVDGN-DPEMVRQILELDINAAEQKHEGYAKIFESAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +G+L Q P LG +I V+ T TL G+ + + P+ S+IK+ ++ +
Sbjct: 162 VMGLIHVLGSL-QDPTGLGPSIAVAFTATLYGVASANIIFLPIASKIKARSEEEIVKMEL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
+ + ++A NG P + +
Sbjct: 221 LLEGIMAVQNGEHPLLVRKKLASF 244
>gi|194365635|ref|YP_002028245.1| flagellar motor protein [Stenotrophomonas maltophilia R551-3]
gi|194348439|gb|ACF51562.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 246
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGLF+ + ++GG G L P VIV + ++ V K + +
Sbjct: 4 LSLIGLFLALASLVGGSILKGAGLASLWSPAAFVIVIVGTVAAILLHTSPAVFKHAFKIV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ ++++ + ++ E ++ +
Sbjct: 64 RWVVRPP---HSDRRELIQQIVEWSNIARRQGLLGLEAQVE-----------------AQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++++ G I ++++ E+ ++ MG P +GI+GA+
Sbjct: 104 QDPFLRKGLQLLVDG-VEPESIRHMLEIELGSQEHQDQAGAKVFEAMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NL+ P LG I + T T+ GI + L P+ +++KS R ++
Sbjct: 163 LGLIAVMKNLAD-PSKLGHGIAAAFTATIYGIASANLLFLPIAAKLKSVISHNTRDREMI 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LI+ G P+ L
Sbjct: 222 IEGLISIAQGENPRNIETNLSGFL 245
>gi|254522690|ref|ZP_05134745.1| flagellar motor protein [Stenotrophomonas sp. SKA14]
gi|219720281|gb|EED38806.1| flagellar motor protein [Stenotrophomonas sp. SKA14]
Length = 246
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 50/264 (18%), Positives = 103/264 (39%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGLF+ + ++GG G L P VIV + ++ V K + +
Sbjct: 4 LSLIGLFLALASLVGGSILKGAGLASLWSPAAFVIVIVGTIAAILLHTSPAVFKHAFKIV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ ++++ + ++ E+ ++ +
Sbjct: 64 RWVVRPP---HSDRRELIQQIVEWSNIARRQGLLGLESQVE-----------------AQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++++ G + ++++ E+ ++ MG P +GI+GA+
Sbjct: 104 QDPFLRKGLQLLVDG-VEPESMRHMLEIELGSQEHQDQAGAKVFEAMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NL+ P LG I + T T+ GI + L P+ +++KS R +V
Sbjct: 163 LGLIAVMKNLAD-PSKLGHGIAAAFTATIYGIASANLLFLPIAAKLKSVISHNTRDREMV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LI+ G P+ L
Sbjct: 222 IEGLISIAQGENPRNIETNLSGFL 245
>gi|312793259|ref|YP_004026182.1| mota/tolq/exbb proton channel [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180399|gb|ADQ40569.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 265
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 22/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 3 ILSIGGLILGFGSLLTAFIIEKGNPAKLLQISAALIVFGGTIAAVLVSFPMSQIKTAVKH 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K + + V++ L L +K E I + N
Sbjct: 63 LKMVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNIQN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +++ G I +++D E+ + E + G P +GI+G
Sbjct: 106 ---PLLKKGLGLVVDG-IEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL+ +P LG AI V+ TL G+ + + +IK+ ++ L I
Sbjct: 162 VMGLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIKTKAKQERMLNEI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ + L++ G P++ E +L +++ +
Sbjct: 221 IVEGLLSIQAGENPRILREKIGGMLKEAKQQQAQTGE 257
>gi|222529064|ref|YP_002572946.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor bescii DSM
6725]
gi|222455911|gb|ACM60173.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor bescii DSM
6725]
Length = 265
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 113/277 (40%), Gaps = 22/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 3 ILSIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKTAVKH 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F K + + V++ L L +K E I + N
Sbjct: 63 FKMVFMDKKI---DFVSVVEQLVQLSDRARKEGLLALEQEIPNIQN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +++ G I +++D E+ + E + G P +GI+G
Sbjct: 106 ---PLLKKGLGLVVDG-IEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYSPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL+ +P LG AI V+ TL G+ + + +IK+ ++ L I
Sbjct: 162 VMGLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIKTKAKQERMLNEI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ + L++ G P++ E +L + + +
Sbjct: 221 IVEGLLSIQAGENPRILREKIGGMLKETGQKQSQAQE 257
>gi|188588133|ref|YP_001922643.1| chemotaxis protein MotA [Clostridium botulinum E3 str. Alaska E43]
gi|251780033|ref|ZP_04822953.1| putative chemotaxis protein MotA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188498414|gb|ACD51550.1| putative chemotaxis protein MotA [Clostridium botulinum E3 str.
Alaska E43]
gi|243084348|gb|EES50238.1| putative chemotaxis protein MotA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 258
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 20/269 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++ L + +I F GG L Q +IV G G ++ P V+K
Sbjct: 3 MMIVLSLIFAFVALILAFLLEGGAITALFQLTAAIIVFGGTFGALGISFPGNVLKKFPKV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + + + L + +K E V +N+
Sbjct: 63 MSIAFKKRKNNME---ENLLFFKDISTRTRKDGLLSLERE---------------VSKNS 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI +++ I G +S I+++++ +++ + S G P +GI+G
Sbjct: 105 DLDPFIKKGLQLAIDGVEQS-SIKSILETKLEQMSERHQVGIEMFSAAGGYAPTMGIIGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ P +LG I + TL GI+ + P+ +++K ++++ +
Sbjct: 164 VMGLIQVVSNLND-PTVLGPKIAAAFIATLYGILSANIFWLPIANKLKVLDMEEYNEKEM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A++ G P + L +
Sbjct: 223 IIQAIVLIQQGTNPNTLVSKLEGFLTDKQ 251
>gi|190574216|ref|YP_001972061.1| flagellar motor protein [Stenotrophomonas maltophilia K279a]
gi|190012138|emb|CAQ45761.1| putative flagellar motor proton channel [Stenotrophomonas
maltophilia K279a]
Length = 246
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 50/264 (18%), Positives = 103/264 (39%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGLF+ + ++GG G L P VIV + ++ V K + +
Sbjct: 4 LSLIGLFLALASLVGGSILKGAGLASLWSPAAFVIVIVGTVAAILLHTSPAVFKHAFKIV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ ++++ + ++ E+ ++ +
Sbjct: 64 RWVVRPP---HSDRRELIQQIVEWSNIARRQGLLGLESQVE-----------------AQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++++ G + ++++ E+ ++ MG P +GI+GA+
Sbjct: 104 QDPFLRKGLQLLVDG-VEPESMRHMLEIELGSQEHQDQAGAKVFEAMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NL+ P LG I + T T+ GI + L P+ +++KS R +V
Sbjct: 163 LGLIAVMKNLAD-PSKLGHGIAAAFTATIYGIASANLLFLPIAAKLKSVISHNTRDREMV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LI+ G P+ L
Sbjct: 222 IEGLISIAQGENPRNIETNLSGFL 245
>gi|329928777|ref|ZP_08282626.1| putative chemotaxis protein MotA [Paenibacillus sp. HGF5]
gi|328937558|gb|EGG33976.1| putative chemotaxis protein MotA [Paenibacillus sp. HGF5]
Length = 264
Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 22/264 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ I+G+ + +IGGF GG+ L+Q +IV G + +++ P ++ +
Sbjct: 3 ITIILGILAGLAALIGGFLWEGGHLSGLLQGAAALIVFGGTIAAVIVSFPATRLRTIPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L FG D D + + ++ E +
Sbjct: 63 LKLAFGRSNRSSDELIDAIVDMS---VTARRDGVLALER-----------------ISAE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M+M++ GN + +++ +I+ + G P +GI+G
Sbjct: 103 HEDPFLREGMQMVVDGN-DPEMVRQILELDINAAEQKHEGYAKIFESAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +G+L Q P LG +I V+ T TL G+ + + P+ S+IK+ ++ +
Sbjct: 162 VMGLIHVLGSL-QDPTGLGPSIAVAFTATLYGVASANIIFLPIASKIKARSEEEIVKMEL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
+ + ++A NG P + +
Sbjct: 221 LLEGIMAVQNGEHPLLVRKKLASF 244
>gi|2853602|gb|AAC08066.1| MotA [Pseudomonas putida]
Length = 246
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K + L
Sbjct: 4 LSLIGLILAFVAIVGGNFLEGGHAGALVNGPAALIVLGGTLAAALLQSPLSSFKRALQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + + E
Sbjct: 64 RWILFPPRVDLAGGID---RVVNWSLTARKEGLLGLEG-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEAIRSILEVDFLTQESRDIQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG I V+ T+ G+ + + P+ +++K+ ++Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLILLPVANKLKANVMRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|312622680|ref|YP_004024293.1| mota/tolq/exbb proton channel [Caldicellulosiruptor kronotskyensis
2002]
gi|312203147|gb|ADQ46474.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor kronotskyensis
2002]
Length = 265
Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 22/260 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 3 ILSIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKTAVKH 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F K + + V++ L L +K E I + N
Sbjct: 63 FKMVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNIQN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +++ G I +++D E+ + E + G P +GI+G
Sbjct: 106 ---PLLKKGLGLVVDG-IEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYSPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL+ +P LG AI V+ TL G+ + + +IK+ ++ L I
Sbjct: 162 VMGLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIKTKAKQERMLNEI 220
Query: 241 VKKALIAYMNGAIPQVAIEY 260
+ + L++ G P++ E
Sbjct: 221 IVEGLLSIQAGENPRILREK 240
>gi|218887299|ref|YP_002436620.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758253|gb|ACL09152.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 252
Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 115/272 (42%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ I+ +IG +MGGNP + ++IV G LG ++ PL V
Sbjct: 3 LATVLGILISFG-LIGTALSMGGNPLFFVDSAALLIVLGGTLGAALVHYPLPVALRVLSI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + D D + ++ E + + +
Sbjct: 62 TRKAFATRLHRIDLVID---QFMEFAHRARREGLLSLEPAVRNLDD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++ I G I +M+ EI + + + PA+G+VG
Sbjct: 105 ---PFLRKGLQLTIDG-LEPDAIREIMESEIAALETRHSMGVDIFNALASYAPALGLVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + +++ P +G A+ V+L T G++L+ + PL +++ ++ +L +
Sbjct: 161 LIGLVQMLRSMND-PSAIGPAMAVALITTFYGVVLANLVFLPLAGKLRHRSKEEVQLMEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ ++A G P++ +E P ER +
Sbjct: 220 QLEGILAIARGENPRIILEKLSCYQPPRERRT 251
>gi|325271955|ref|ZP_08138406.1| flagellar motor protein [Pseudomonas sp. TJI-51]
gi|324102903|gb|EGC00299.1| flagellar motor protein [Pseudomonas sp. TJI-51]
Length = 246
Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K + L
Sbjct: 4 LSLIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGTLAAALLQSPLASFKRALQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 RWILFPPRVDLAGGID---RVVNWSLTARKEGLLGLEG-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEAIRSILEVDFLTQESRDIQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG I V+ T+ G+ + + P+ +++K+ ++Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLVLLPIANKLKAVVMRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|158320523|ref|YP_001513030.1| MotA/TolQ/ExbB proton channel [Alkaliphilus oremlandii OhILAs]
gi|158140722|gb|ABW19034.1| MotA/TolQ/ExbB proton channel [Alkaliphilus oremlandii OhILAs]
Length = 261
Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 54/280 (19%), Positives = 111/280 (39%), Gaps = 23/280 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+FI + +I G G + + I I I G + ++ PL+ + +
Sbjct: 3 LATILGIFIGMFFVIQGITQEG-SIWNFIDMSSIYITFGGMIAATLVGFPLQNVLAAFKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F KA D ++ + L +K E +
Sbjct: 62 GGKAFFNKA---DDPKAIIAQINTLANIARKEGLLALEE------------------ASG 100
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ M+IV + NL++ E+ I +G + PA G+VG
Sbjct: 101 QIDEPFLKKGAMLIVDGTDPELVRNLLETELSFIEERHRNGQAIFEALGANAPAFGMVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + L P +G ++ V+L T G + + + P+ +++K ++ I
Sbjct: 161 LIGLVNMLKKLDD-PSAIGPSMAVALITTFYGSLFANLIFLPMATKLKLKSREEILRKEI 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ + L++ G P++ E + LP ER + + V
Sbjct: 220 MVEGLLSIQAGENPRIIEEKLKAFLPPKERENYNSKQEGV 259
>gi|220917667|ref|YP_002492971.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955521|gb|ACL65905.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 261
Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 108/271 (39%), Gaps = 24/271 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TI G+F + I+ G GG+ L+Q +IV G G ++A P + + + L
Sbjct: 4 TTIAGIFAAVGLILLGQALEGGHVGSLLQATAALIVFGGTFGAVLVAFPRRDVGRALSQL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + + + L ++ E +P +
Sbjct: 64 KLVFAERKV---DLGALSRELVEYAGVARRDGVLALE------------AKLPGI----- 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++++ G + + ++ +D E G P IGI+GA+
Sbjct: 104 PDPFLRRALQLVVDG-VDASVTRSTLEAAVDAEYEEHAVGAKVWEAAGGFAPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NLS P LG I V+ T+ G+ + L P +++K + ++
Sbjct: 163 LGLIHVMENLSD-PSKLGGGIAVAFVATVYGVGSANVLFLPFATKMKRKLGAERDRKTLI 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL--PLSER 270
+ ++A G P+V E R P +ER
Sbjct: 222 TEGVLAIQEGINPRVLEEKLRAYSGEPPAER 252
>gi|23100000|ref|NP_693466.1| flagellar motor protein MotA [Oceanobacillus iheyensis HTE831]
gi|22778231|dbj|BAC14501.1| motility protein A (flagellar motor rotation) [Oceanobacillus
iheyensis HTE831]
Length = 261
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 115/274 (41%), Gaps = 21/274 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIGL + ++ + G G LI P I+I+ +A P +K
Sbjct: 4 TSIIGLILGLIAVGIGMVLKGVGLEALINPAAILIILLGTAAAVTIAFPGSALKKIPALF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF Q +++++ +K E I + +S
Sbjct: 64 KIIFTESK--QANTKEIIEMFSDWADQTRKEGILSLEQQISEVDDS-------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++ I G + + I+++M E+I+ + + + G P +G++GA+
Sbjct: 108 ---FLSSGLQLAIDGQSPDF-IKDIMLEKIEAMEQRHEEGAAIFTQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+G++S LG AI + TLLGI Y L +P ++++ ++ I+
Sbjct: 164 IGLIAALGDMSD-IDALGAAISAAFIATLLGIFTGYVLWHPFANKLREKSKREVLQKEII 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ +++ G + E +LP + SI+
Sbjct: 223 VEGILSITTGDSRLIVQEKLGSLLPSKDIASIKE 256
>gi|89100105|ref|ZP_01172974.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
gi|89085195|gb|EAR64327.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
Length = 272
Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 108/277 (38%), Gaps = 24/277 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
T IGLFI ++ G GG + P ++I+ G + G +++ PL+ IK S
Sbjct: 7 LTPIGLFIGFAMLVFGIMTNGGFSGFLSFVDPASMLIILGGLISGLLVSFPLRDIKHSFT 66
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+ + F DV L ++ E I+ + I +
Sbjct: 67 VVRQSFSNDEKNLAEIIDV---FVKLSDKARREGLLSLETEIEQMEDPFIRKGV------ 117
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
++ V I ++M+ EI + K + GE PA G++G
Sbjct: 118 ------------LLAVDGLEPDVINDIMNAEIAAMEERHRKGRSILEKAGEYAPAWGMIG 165
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + NL+ P LG + ++L TL G +L+ + P+ +++ K+ L
Sbjct: 166 TLIGLVLMLKNLND-PASLGPNMAIALLTTLYGSLLANLVFLPMAAKLLLKTEKEVFLKQ 224
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
IV + ++ G P++ E L ER
Sbjct: 225 IVIEGVLGVQAGQNPRLLEEKLGAFLSAQERKEKYEA 261
>gi|312877227|ref|ZP_07737196.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor lactoaceticus
6A]
gi|311796036|gb|EFR12396.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor lactoaceticus
6A]
Length = 265
Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 113/277 (40%), Gaps = 22/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 3 ILSIGGLILGFGSLLIAFILEKGNPAKLLQISAALIVFGGTIAAVLVSFPMSQIKTAVKH 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F K + + V++ L L +K E I + N
Sbjct: 63 FKMVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNIQN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +++ G I +++D E+ + E + G P +GI+G
Sbjct: 106 ---PLMKKGLGLVVDG-IEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL+ +P LG AI V+ TL G+ + + +IK+ ++ L I
Sbjct: 162 VMGLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIKTKAKQERMLNEI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ + L++ G P++ E +L + + +
Sbjct: 221 IVEGLLSIQAGENPRILREKIGGMLKEAGQKQSQAQE 257
>gi|150390476|ref|YP_001320525.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
gi|149950338|gb|ABR48866.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
Length = 262
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ + + ++ G A G + +Q ++IV G ++A PL+ + D+
Sbjct: 3 IATIIGIIVGLGFVVMGITADG-DIAGFLQLSSMLIVFGGTFSATLVAYPLQQVLDTIKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F + ++K + L +K E +
Sbjct: 62 VSKAFSN---NKVDPGSIIKSIIELANVARKEGLLALEEAAEGINE-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M+IV + NL++ E+ I + MG PA G+VG
Sbjct: 105 ---DFLQKGV-MLIVDGTDPELVRNLLETELAFIEERHQGGQGLLEMMGALAPAFGMVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + +L P +G + V+L T G +++ + PL +++K ++ I
Sbjct: 161 LIGLINLLRDLDD-PASIGPNMSVALLTTFYGALMANLIFIPLANKLKLRSREEILRKEI 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + L++ G P++ E + LP R
Sbjct: 220 MVEGLLSIQAGENPRIIEEKLKAFLPPKLR 249
>gi|197122875|ref|YP_002134826.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|196172724|gb|ACG73697.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
Length = 261
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 109/271 (40%), Gaps = 24/271 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TI G+F + I+ G GG+ L+Q +IV G LG ++A P + + + L
Sbjct: 4 TTIAGIFAAVGLILLGQALEGGHVGSLLQATAALIVFGGTLGAVLVAFPRRDVGRALSQL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + + + L ++ E +P +
Sbjct: 64 KLVFAERKV---DLGALSRELVEYAGVARRDGVLALE------------AKLPGI----- 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++++ G + + ++ +D E G P IGI+GA+
Sbjct: 104 PDPFLRRALQLVVDG-VDASVSRSTLEAAVDAEYEEHAVGAKVWEAAGGFAPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NLS P LG I V+ T+ G+ + L P +++K + ++
Sbjct: 163 LGLIHVMENLSD-PSKLGGGIAVAFVATVYGVGSANVLFLPFATKMKRKLGAERDRKTLI 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL--PLSER 270
+ ++A G P+V E R P +ER
Sbjct: 222 TEGVLAIQEGINPRVLEEKLRAYSGEPPAER 252
>gi|77457795|ref|YP_347300.1| flagellar motor protein [Pseudomonas fluorescens Pf0-1]
gi|77381798|gb|ABA73311.1| putative chemotaxis protein [Pseudomonas fluorescens Pf0-1]
Length = 246
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IG+ + + IIGG Y GG+ L +IV G +G ++ +P+ K + L
Sbjct: 4 LSLIGIIMAFVAIIGGNYLEGGHLGALANGPAALIVLGGTIGAALLQSPMSAFKRAMQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF + D + +K E + + E
Sbjct: 64 AWIFFPPRVDLAGGID---RVVNWSLTARKEGLLGLEG-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P IGI+GA+
Sbjct: 104 PDAYSRKGLQLLVDG-AEPEAIRSILEVDFYTQEARDVEAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG I V+ T+ G+ + + P+ +++KS L+Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLILLPVAAKLKSIALRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P+ + +
Sbjct: 222 LEGILSIAEGENPRSIELKLQGFM 245
>gi|187932852|ref|YP_001887660.1| chemotaxis protein MotA [Clostridium botulinum B str. Eklund 17B]
gi|187721005|gb|ACD22226.1| putative chemotaxis protein MotA [Clostridium botulinum B str.
Eklund 17B]
Length = 258
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 111/269 (41%), Gaps = 20/269 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++ L T + +I F GG L Q +IV G G ++ P V+K
Sbjct: 3 MMIVLSLIFTFIALILVFLLEGGAITALFQLTAAIIVFGGTFGALGISFPGNVLKKFPKV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + + + L + +K E V +N+
Sbjct: 63 MSIAFKKRKNNME---ENLLFFKDISTRTRKDGLLSLERE---------------VSKNS 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L +FI +++ I G +S I+N+++ +++ + S G P +GI+G
Sbjct: 105 DLDSFIKKGLQLAIDGVEQS-SIKNILETKLEQMSERHQAGIEMFSAAGGYAPTMGIIGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ P +LG I + TL GI+ + P+ +++K ++++ +
Sbjct: 164 VMGLIQVVSNLND-PTVLGPKIAAAFIATLYGILSANIFWLPIANKLKVLDMEEYNEKEM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A++ G P + L +
Sbjct: 223 IIQAIVLIQQGTNPNTLVSKLEGFLTEKQ 251
>gi|89093475|ref|ZP_01166423.1| flagellar motor protein [Oceanospirillum sp. MED92]
gi|89082165|gb|EAR61389.1| flagellar motor protein [Oceanospirillum sp. MED92]
Length = 252
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 125/274 (45%), Gaps = 25/274 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + ++ GG+ + I P ++IV G L +M+ L +G
Sbjct: 3 IATLVGLLGSFGIVVAAMVM-GGDVGVFINPPSLLIVIGGSLFVVLMSYTLGQFLAAGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K+L + D++ L +KG E +
Sbjct: 62 AAKAFMFKSLNPE---DIIAETVDLADAARKGGLLSLE-------------------DKT 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ +++++ G+ ++ L+ +E + + +G+ PA+G++G
Sbjct: 100 VSSDFMQRGIQLLVDGH-DPDVVKMLLKKESKLTHDRHEFGASIFASLGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+S PK +G A+ V+L TL G +L+ +C P++ ++K + ++ +
Sbjct: 159 LVGLVQMLSNMSD-PKSIGPAMAVALLTTLYGAMLANMICIPISDKLKVRKDEEALNNDL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ L+A G P+V + R LP +R + E
Sbjct: 218 IIDGLLAIQAGQNPRVIEQMLRNYLPEKKRAAAE 251
>gi|313497821|gb|ADR59187.1| MotC [Pseudomonas putida BIRD-1]
Length = 246
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K + L
Sbjct: 4 LSLIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGTLAAALLQSPLSSFKRALQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 RWILFPPRVDLAGGID---RVVNWSLTARKEGLLGLEG-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ ++ ++ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEAIRSILEVDLLTQEGRDIQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG I V+ T+ G+ + + P+ S++K+ ++Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLVLLPVASKLKAIVMRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|330808240|ref|YP_004352702.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376348|gb|AEA67698.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 246
Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IG+ + + IIGG Y GG+ L +IV G +G ++ +P+ K + L
Sbjct: 4 LSLIGIIMAFVAIIGGNYLEGGHLGALANGPAALIVLGGTIGAALLQSPMSAFKRAMQVL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ I + D + +K E + + E
Sbjct: 64 IWILFPPRVDLAGGID---RVVNWSLTARKEGLLGLEG-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ +++++ G A I ++++ + ++ MG P IGI+GA+
Sbjct: 104 PDSYSRKGLQLLVDG-AEPEAIRSILEVDFYTQESRDIEAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ + + P+ +++KS L+Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVASANLVLLPIAAKLKSIALRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P+ + +
Sbjct: 222 LEGILSIAEGENPRSIELKLQGFM 245
>gi|307265591|ref|ZP_07547145.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter wiegelii Rt8.B1]
gi|326389647|ref|ZP_08211213.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus JW
200]
gi|306919389|gb|EFN49609.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter wiegelii Rt8.B1]
gi|325994362|gb|EGD52788.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus JW
200]
Length = 273
Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 57/285 (20%), Positives = 116/285 (40%), Gaps = 23/285 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ + + +I GF GG LI +IV G +G + + + IK
Sbjct: 5 IATIVGIVLGVGSLIYGFTLEGGTVASLIGVSAAIIVFGGTIGATITSYSMDEIKKVPGL 64
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ F + +D Y +++K L + S E
Sbjct: 65 LVRAFKNE---KDNYLEIIKYFTYLAQKARSEGLLSL-------------ESEIESEEIK 108
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + + + +++ G+ I M+ +I I E K G P +GI+G
Sbjct: 109 KFDPILKESLELVVDGSDMEL-IRTTMENKIYIEDMEAKKEAGIFESAGGYAPTMGIIGT 167
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + NLS+ P LG +I V+ TL G+ + L P+ ++K+ + +
Sbjct: 168 VMGLVHVLSNLSE-PDKLGPSIAVAFIATLYGVSSANLLWLPIAQKLKNRAHIKRTEREL 226
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE-----IVAQEV 280
+ + ++ G P++ + ++R +I + +EV
Sbjct: 227 ILEGSLSLQAGENPKILERKLMTFITQAQRKNIPQKGSVELNEEV 271
>gi|152987197|ref|YP_001349220.1| flagellar motor protein [Pseudomonas aeruginosa PA7]
gi|150962355|gb|ABR84380.1| probable chemotaxis transmembrane proton channel [Pseudomonas
aeruginosa PA7]
Length = 246
Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 113/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++G+ + + I+GG + GG+ L+ +IV G L ++ P+ V+K L
Sbjct: 4 LSLVGIILAFVAIVGGNFLEGGHAGALLNGPAALIVIGGTLAAALLQTPVNVLKRGLGML 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F D + +K E+ + + E
Sbjct: 64 GWVFFPPREDLAGGID---RIVAWSMTARKEGLLGLES-----------------IADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ ++ L+ MG P IGI+GA+
Sbjct: 104 ADPYARKGLQLLVDG-AEPEVIRSILEVDLFTQEGRDLQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ +P LG+ I V+ T+ G+ + L P+ +++K+ L+Q R ++
Sbjct: 163 MGLIHVMGNLA-NPAQLGSGIAVAFVATIYGVGFANLLLLPIGNKLKTLVLRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|332981442|ref|YP_004462883.1| MotA/TolQ/ExbB proton channel [Mahella australiensis 50-1 BON]
gi|332699120|gb|AEE96061.1| MotA/TolQ/ExbB proton channel [Mahella australiensis 50-1 BON]
Length = 267
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 107/268 (39%), Gaps = 23/268 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI GL I I G N I+I G + +++ PL + ++
Sbjct: 3 IATIAGLIAGIAFIAIGILLN-ANLLTYYDLPSIMITLGGTIASTLISYPLSNVLNTLGI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F K D++ L ++ E
Sbjct: 62 IKNVFFVKRQNPKEIMDIIL---NLANTARREGLLALEEA-----------------AYQ 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + ++IV ++N+M+ E++ I + + + MG PA G++G
Sbjct: 102 LDDPFMRKGI-LLIVDGTDPELVKNIMETELNYIEERHKQGWGLLETMGNYAPAFGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL+ P +G + V++T T G +L+ + P+ ++K ++ L +
Sbjct: 161 LIGLINMLRNLND-PDTIGPNMAVAITTTFYGSVLANLIFLPMAQKLKVRSAEEMLLKEL 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLS 268
V + +++ G P++ E + LP
Sbjct: 220 VLEGVLSIQAGENPRIIEEKLKAFLPPK 247
>gi|146296537|ref|YP_001180308.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145410113|gb|ABP67117.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 265
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 55/285 (19%), Positives = 113/285 (39%), Gaps = 22/285 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 3 ILSIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSEIKLAIKH 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K + + +++ L L +K E I + N
Sbjct: 63 LKMVFMDKKI---DFSGIVEQLVQLSDRARKEGLLALEQEIPNIQN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +++ G I +++D E+ + E G P +GI+G
Sbjct: 106 ---PLLKKGLGLVVDG-IEGEVIRDILDREVYLAENELRAAAEVFEAAGGYSPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + N+S +P + AI V+ TL G+ + + +IK+ ++ L I
Sbjct: 162 VMGLISVLSNIS-NPDEVAPAIAVAFVATLYGVSFANLVWLNFGKKIKTKAKQEKMLNEI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+ + L++ G P++ E +LP ++ +
Sbjct: 221 IVEGLLSIQAGENPRILREKIGGILPEGKQQERQAGEAASATIGG 265
>gi|295696766|ref|YP_003590004.1| MotA/TolQ/ExbB proton channel [Bacillus tusciae DSM 2912]
gi|295412368|gb|ADG06860.1| MotA/TolQ/ExbB proton channel [Bacillus tusciae DSM 2912]
Length = 264
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 102/269 (37%), Gaps = 22/269 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++ G+ I ++ F GG+ Y L Q +IV G + I L
Sbjct: 5 ASVFGMIAGIGALVTAFVLEGGDIYALFQGTAALIVFGGTFAATAVGLSRDQILAIPALL 64
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F K +++ L L +K E I++ +
Sbjct: 65 KVAFLGKT---KDPHRLIRDLVELAGTARKEGLLALEERIEEFED--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++I+ G + +++ ++ + + G P +GI+G +
Sbjct: 107 --PFMKQGIQLIVDG-VDPELVRTMLETDVQFLENRHRQGVAIFEAAGGYAPTMGIIGTV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ + NLS + LG I + TL G+ + + P+ +++K ++ + ++
Sbjct: 164 MGLVHVLSNLSD-IQSLGPLIATAFIATLYGVASANLIYFPIATKLKLRSDEEIMIRELI 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ G P + + + LP R
Sbjct: 223 IEGVLSIQAGENPTLLGQKLKAFLPPKWR 251
>gi|74317268|ref|YP_315008.1| flagellar motor protein [Thiobacillus denitrificans ATCC 25259]
gi|74056763|gb|AAZ97203.1| chemotaxis transmembrane protein MotA [Thiobacillus denitrificans
ATCC 25259]
Length = 245
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S++IGL + I+GG GG+ + +QP ++IV G L ++ +PL V
Sbjct: 4 SSLIGLALGGAAILGGQAIEGGHLGLFVQPAALLIVVGGTLAAVLLHHPLPVFLRGVRMA 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F T +++ + + ++ S E H+ N
Sbjct: 64 KWAFHPPPCEAST---LIRRIVQWSHTARQESILALEKHL-----------------NLT 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F ++++I G A ++ +D +I + + G P +GI+GA+
Sbjct: 104 HDPFQRTGLQLLIDG-ADPVKLRETLDVQIVGFETAERQAARVWEVAGGYAPTLGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I M NLS P LG+ I V+ T+ G+ L+ L P+ ++IK T ++ IV
Sbjct: 163 MGLIHVMENLSD-PGKLGSGIAVAFVATIYGVGLANLLFLPVANKIKFTIARRVTEREIV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
LIA G P++ + L
Sbjct: 222 CDGLIAIAQGDNPRIIEARLKGYL 245
>gi|299822261|ref|ZP_07054147.1| chemotaxis protein MotA [Listeria grayi DSM 20601]
gi|299815790|gb|EFI83028.1| chemotaxis protein MotA [Listeria grayi DSM 20601]
Length = 278
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 111/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ I G F + +L ++++ + +MA+P +K
Sbjct: 3 ITTIIGLILAVIVIAGSFLIQHISLAMLFSAEALIVIILGTITSVLMAHPWNDVKRVPQL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F ++ + +VL+ +++ E +D+
Sbjct: 63 FKVLFTTESGP--SKIEVLRTFKEYADTIRRSGVLALEEEVDEI---------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +R+++ G + + M+EE+ + + G P +G++GA
Sbjct: 105 -PDKFLRRGLRLVVDGQSSPEFLRETMEEEVSSMEERHENYAKIFASAGSYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I AMG +S +P L AI + T+ GI Y L NP ++++ ++ +
Sbjct: 164 AMGLIHAMGQMS-NPDKLSEAIAAAFVCTIFGIFTGYVLWNPFANKLRIKSRQEAHKRYM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A P++ E L E+
Sbjct: 223 IIEGVVALQERNAPRMIEERLLSFLSPQEK 252
>gi|229591827|ref|YP_002873946.1| flagellar motor protein [Pseudomonas fluorescens SBW25]
gi|229363693|emb|CAY51067.1| putative chemotaxis protein [Pseudomonas fluorescens SBW25]
Length = 246
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IG+ + + IIGG Y GG+ L +IV G +G ++ +P+ K + L
Sbjct: 4 LSLIGIIMAFVAIIGGNYLEGGHLGALANGPAALIVIGGTVGAALLQSPMSSFKRAMQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ I + D + +K E + + E
Sbjct: 64 IWIIFPPRVDLPGGID---RVVNWSLTARKEGLLGLEG-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ +++++ G A I ++++ + + MG P IGI+GA+
Sbjct: 104 PDSYARKGLQLLVDG-AEPEAIRSILEVDFYTQESRDINAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ + + P+ S++KS ++Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVASANLVLLPVASKLKSIAMRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P+ + +
Sbjct: 222 LEGILSIAEGENPRSIELKLQGFM 245
>gi|317151981|ref|YP_004120029.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316942232|gb|ADU61283.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 253
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 108/268 (40%), Gaps = 23/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+IG+ ++ ++ G + I I IV G LG ++ PL + +
Sbjct: 5 TVIGIVLSFGLVVAA-ILSGSSLIIFISVPSFFIVIGGTLGAAMVNYPLSYVIGLVGVIK 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
F D K ++ E I + +
Sbjct: 64 NTFFSSLESPREIIDRFK---DYANRARREGILSLEPLIKEIDD---------------- 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
++ +++ + G I+ +++ E+ + ++ +G PA+G++G ++
Sbjct: 105 -DYMRKGLQLTVDG-LEPQTIQEILETEVSYLSERHATGADVVAVLGTLAPAMGMIGTVV 162
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+++ + +S P +G A+ V+L TL G +L+ + NP+ ++K+ ++ L ++
Sbjct: 163 GLVQMLQTMSD-PSTIGPAMAVALLTTLYGAMLANLVFNPMAGKLKARSKEEILLREMIM 221
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ G P++ E LP +R
Sbjct: 222 EGILSISKGENPRIIEEKLNSYLPPKDR 249
>gi|304317568|ref|YP_003852713.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779070|gb|ADL69629.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 270
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 108/268 (40%), Gaps = 18/268 (6%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST++G+ + +I F GG+ LI +IV G +G + + +K I +
Sbjct: 4 STLLGIIVGFGSLIFAFVLEGGSVSSLIGLSAAIIVLGGTIGATMTSFSMKDILKLPKLI 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ F + + Y D++K L + E + S + +L++
Sbjct: 64 GKAFKEEG---NKYLDIIKYFVYLSQKARSEGLLSLEQEL----QSDEIKNYDPILKD-- 114
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+++ A I+ M+ I I K G P +GI+G +
Sbjct: 115 --------CIELVIDGADIELIKTTMENRIYIEDKALKKEASMFEAAGGYSPTMGIIGTV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ +GNLSQ P LG +I V+ TL G+ ++ + P+ ++K+ + I+
Sbjct: 167 MGLVHVLGNLSQ-PDKLGPSIAVAFIATLYGVSMANLVWLPIGEKLKNKAQIKKTEKEII 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ ++ G P++ + + +
Sbjct: 226 LEGSLSLQAGENPKIVEKKLMTFVVEKD 253
>gi|148546770|ref|YP_001266872.1| flagellar motor protein [Pseudomonas putida F1]
gi|148510828|gb|ABQ77688.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida F1]
Length = 246
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K + L
Sbjct: 4 LSLIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGTLAAALLQSPLSSFKRALQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 RWILFPPRVDLAGGID---RVVNWSLTARKEGLLGLEG-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEAIRSILEVDFLTQEGRDIQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG I V+ T+ G+ + + P+ S++K+ ++Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLVLLPVASKLKAIVMRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|26991026|ref|NP_746451.1| flagellar motor protein [Pseudomonas putida KT2440]
gi|24986056|gb|AAN69915.1|AE016630_6 flagellar motor protein MotA [Pseudomonas putida KT2440]
Length = 246
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K + L
Sbjct: 4 LSLIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGTLAAALLQSPLTSFKRALQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 RWILFPPRVDLAGGID---RVVNWSLTARKEGLLGLEG-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ ++ ++ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEAIRSILEVDLLTQEGRDIQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG I V+ T+ G+ + + P+ S++K+ ++Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLVLLPVASKLKAIVMRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|163789639|ref|ZP_02184077.1| MotA/TolQ/ExbB proton channel [Carnobacterium sp. AT7]
gi|159875171|gb|EDP69237.1| MotA/TolQ/ExbB proton channel [Carnobacterium sp. AT7]
Length = 269
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 53/283 (18%), Positives = 106/283 (37%), Gaps = 23/283 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
IIGL + II GN I +VI G +++ PLK IK L
Sbjct: 8 IIGLILGFGLIIWS-ITSSGNIASFIDTPSLVITLGGSFSAILISFPLKSIKTLPSILKT 66
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ Y ++++ L + E I+ N
Sbjct: 67 LVLDPNPN---YNELIETFASLSRKARSQGILAIEEDIEQQDN----------------- 106
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+ ++M++ G + ++M+ + I GE PA G++G ++G
Sbjct: 107 ELMVSGLQMVVDG-LEPETVRDIMEITTENIEKRHSVGQDIFLKWGEMAPAYGMIGTLIG 165
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I +G L P +G + +L T G L+ + P+ S +++ +++ + ++ +
Sbjct: 166 LIIMLGELDD-PSTIGVGMATALITTFYGSFLANLVFIPIASNLQNQTIEEMKFCEMIIE 224
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+++ G P+V + + LP + A ++ Q N
Sbjct: 225 GVLSLQAGENPRVIEQKLKGYLPFENKEDAMKEAAKIQQEEEN 267
>gi|70729062|ref|YP_258798.1| flagellar motor protein [Pseudomonas fluorescens Pf-5]
gi|68343361|gb|AAY90967.1| flagellar motor protein MotA [Pseudomonas fluorescens Pf-5]
Length = 246
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IG+ + + IIGG Y GG+ L +IV G +G ++ +PL K + L
Sbjct: 4 LSLIGIIMAFVAIIGGNYLEGGHLSALANGPAALIVLGGTIGAALLQSPLSAFKRAMQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + + E
Sbjct: 64 AWILFPPRVDLPGGID---RVVNWSLTARKEGLLGLEG-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ +++++ G A I ++++ + ++ MG P IGI+GA+
Sbjct: 104 PDSYARKGLQLLVDG-AEPEAIRSILEVDFYTQESRDIEAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ + + P+ +++KS L+Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVASANLVLLPIAAKLKSVALRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P+ + +
Sbjct: 222 LEGILSIAEGENPRSIELKLQGFM 245
>gi|86157811|ref|YP_464596.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774322|gb|ABC81159.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
Length = 261
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 110/273 (40%), Gaps = 24/273 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TI G+ + I+ G GG+ L+Q +IV G G ++A P + + + L
Sbjct: 4 TTIAGIAAAVGLILLGQALEGGHVGSLLQATAALIVFGGTFGAVLVAFPRRDVGKALSQL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + + + L ++ E +P +
Sbjct: 64 KLVFTERKV---DLGALSRELVDYAGVARRDGVLALE------------ARLPGI----- 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++++ G + + ++ +D E++ G P +GI+GA+
Sbjct: 104 PDPFLRRALQLVVDG-VDASVTRSTLEAAVDADFEERVVGAKVWEAAGGFAPTVGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NLS P LG I V+ T+ G+ + L P +++K + +V
Sbjct: 163 LGLIHVMENLSD-PSKLGGGIAVAFVATVYGVGSANVLFLPFANKMKRKLGAERDRKTLV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL--PLSERPS 272
+ ++A G P+V E R P +ER +
Sbjct: 222 TEGVLAIQEGINPRVLEEKLRAYSGEPPAEREA 254
>gi|312127874|ref|YP_003992748.1| mota/tolq/exbb proton channel [Caldicellulosiruptor hydrothermalis
108]
gi|311777893|gb|ADQ07379.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor hydrothermalis
108]
Length = 265
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 22/260 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 3 ILSIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKTAVKH 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F K + + V++ L L +K E I + N
Sbjct: 63 FKLVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNIQN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +++ G I +++D E+ + E + G P +GI+G
Sbjct: 106 ---PLLKKGLGLVVDG-IEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL+ +P LG AI V+ TL G+ + + +IK+ ++ L I
Sbjct: 162 VMGLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIKTKAKQERMLNEI 220
Query: 241 VKKALIAYMNGAIPQVAIEY 260
+ + L++ G P++ E
Sbjct: 221 IVEGLLSIQAGENPRILREK 240
>gi|332702328|ref|ZP_08422416.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332552477|gb|EGJ49521.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 253
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 107/271 (39%), Gaps = 23/271 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + ++ G M I I VIV G +G ++ P+ +
Sbjct: 3 LATIIGLVLAFGLVVAG-IMMNSTLLIYIDIPSAVIVLGGTIGAALVNYPIGHMMSVLKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ D D++ ++ E + + +
Sbjct: 62 CRKTLFASM---DDPKDIISRFMDYANRARREGILSLEPILKEIDD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +++ + G I+ +M+ EI + + MG PA+G++G
Sbjct: 105 ---EYLKKGLQLTVDG-LEPQTIQEIMETEIHYLESRHETGAEILGAMGNYAPALGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + +S P +G A+ V+L T G +L+ + NP+ ++K ++ L +
Sbjct: 161 VIGLVAMLSTMSD-PSTIGPAMAVALITTFYGALLANLVFNPMAGKLKLRSRQEVLLREM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
V + ++A G P++ E L SER
Sbjct: 220 VLEGILAISKGENPRIIEEKLNSYLAPSERK 250
>gi|254519412|ref|ZP_05131468.1| chemotaxis MotA protein [Clostridium sp. 7_2_43FAA]
gi|226913161|gb|EEH98362.1| chemotaxis MotA protein [Clostridium sp. 7_2_43FAA]
Length = 268
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 115/270 (42%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T +GL ++I+ +I G G + I ++I G L ++ L+ +K+ G
Sbjct: 6 ILTSVGLILSIVLMIYGMLI-GSSLKIFWDVASVIITVGGSLSALLITYSLEEVKNMGKL 64
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F + + D++ L ++ E+ I + +
Sbjct: 65 FIQAFK---ENKSSGKDIIIRFGSLSKKARREGLLSLEDDISEMED-------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G I +++ EI + + + G PA G++G
Sbjct: 108 ---PFMKKGLQMVVDG-IEPETIREILELEIGEMENRHERGAGIYAAWGAYAPAFGMLGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ + + +G +L T G +L+ LCNP+ S ++ K+ +
Sbjct: 164 LIGLIQMLANLTDV-ANIASGMGKALITTFYGSLLANILCNPIASNLRQKSAKEAGEREM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++A +G P++ E LP E+
Sbjct: 223 ILEGILAIQSGVNPRIVEEKLITYLPPKEK 252
>gi|170722825|ref|YP_001750513.1| flagellar motor protein [Pseudomonas putida W619]
gi|169760828|gb|ACA74144.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
Length = 246
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ L+ +IV G L ++ +PL K + L
Sbjct: 4 LSLIGLILAFVAIVGGNFLEGGHVGALLNGPAALIVLGGTLAAALLQSPLSSFKRALQIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + + E
Sbjct: 64 RWIIFPPRVDLAGGID---RVVNWSLTARKEGLLGLEG-----------------VADGE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPEAIRSILEVDFLTQEGRDIQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG I V+ T+ G+ + + P+ S++K+ ++Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLILLPVASKLKAIVMRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|304407654|ref|ZP_07389305.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
gi|304343137|gb|EFM08980.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
Length = 265
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 115/268 (42%), Gaps = 22/268 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ ++ +IGGF GG L+Q +IV G ++ P ++ +
Sbjct: 3 LTTIIGIAAGLVALIGGFLLEGGQFSGLLQLTAAIIVFGGTFAAVAVSFPYSKLRQLPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + D L + ++ E + + N
Sbjct: 63 LRFAFTKQTQKPEEVID---QLVDMAMVARREGVLALERSLPELDN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ D ++M+I G + ++ EID + + + G P +GI+G
Sbjct: 106 ---VYMRDGLQMVIDGT-DPELTKGILTLEIDSAERKWEQQAKMLESAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NLS P LG +I V+ T TL G+ + + PL ++IK+ +Q L +
Sbjct: 162 VMGLIRVLSNLSD-PSSLGHSIAVAFTATLYGVASANIVYLPLGTKIKAQAAEQTLLMEL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLS 268
+ + +++ G PQ+ + +L L
Sbjct: 221 ILEGILSVQAGENPQLIRKKLSALLQLE 248
>gi|330502788|ref|YP_004379657.1| flagellar motor protein [Pseudomonas mendocina NK-01]
gi|328917074|gb|AEB57905.1| flagellar motor protein [Pseudomonas mendocina NK-01]
Length = 246
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IG+ + + I+GG Y GGN L+ +IV G LG + P++V K + L
Sbjct: 4 LSLIGVILAFVAILGGNYLEGGNAGALLNGPAALIVIGGTLGAAFLQAPVQVFKRAMGIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF + D + +++ M +K E+ + + E
Sbjct: 64 RWIFFPPRI--DLIGGINRVVGWSMV-ARKEGLLGLES-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ ++ ++ MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPESIRSILEVDLYTQEARDIQAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P +LG+ I V+ T+ G+ + L P +++KS L+Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSMLGSGIAVAFVATIYGVGFANLLLLPAGNKLKSIALRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P+ + +
Sbjct: 222 LEGILSIAEGENPRSIELKLQGFM 245
>gi|78358628|ref|YP_390077.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78221033|gb|ABB40382.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 254
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 114/272 (41%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ I+ ++ G GG+ I + ++IV G +G ++ PL +
Sbjct: 3 LATILGIVISFGLVLAG-ILEGGSIMIFVSIPSLLIVVGGTIGATLVNYPLATVLGVMGV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F A + +++ ++ E I + +
Sbjct: 62 IKKTFNASAQSPSS---IIEQFMDFANRARREGILSLEPVIKEVED-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +++ + G I+ +++ EI + I+ MG PA+G++G
Sbjct: 105 ---AYLRKGLQLTVDG-LEPQAIQEILETEISSLESRHETGVEIINAMGAYAPALGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + +S P +G A+ V+L T G +L+ + P+ ++K ++ + +
Sbjct: 161 VIGLVQMLQTMSD-PSSIGPAMAVALITTFYGAVLANLVFIPMAGKLKMRSREEVTMREM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ ++A G P++ E P ER +
Sbjct: 220 QMEGILAISRGENPRIIQEKLSSYQPPKERKA 251
>gi|312962249|ref|ZP_07776741.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
gi|311283586|gb|EFQ62175.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
Length = 246
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IG+ + + IIGG Y GG+ L +IV G +G ++ +P+ K + +
Sbjct: 4 LSLIGITMAFVAIIGGNYLEGGHLGALANGPAALIVIGGTVGAALLQSPMSSFKRAMQIM 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ I + D + +K E + + E
Sbjct: 64 IWIIFPPRVDLPGGID---RVVNWSLTARKEGLLGLEG-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ +++++ G A I ++++ + + MG P IGI+GA+
Sbjct: 104 PDSYSRKGLQLLVDG-AEPEAIRSILEVDFYTQESRDINAAKVFESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ + + P+ S++KS ++Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVASANLVLLPVASKLKSIAMRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P+ + +
Sbjct: 222 LEGILSIAEGENPRSIELKLQGFM 245
>gi|265996660|ref|ZP_06109217.1| flagellar motor protein MotA [Brucella ceti M490/95/1]
gi|262550957|gb|EEZ07118.1| flagellar motor protein MotA [Brucella ceti M490/95/1]
Length = 172
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 95/172 (55%), Positives = 121/172 (70%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
MGG+ +LIQP+E +I+ GA LG F +ANP ++KD+G + +E F Q Y DVL
Sbjct: 1 MGGHVSVLIQPWEFIIILGAALGTFFVANPFSLVKDTGRACMEAFTDAVPKQRDYLDVLG 60
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
+LY LM L+ SRNE E HID+P S IF + P+VL+ +LT FICDY R+IIVGN RS
Sbjct: 61 VLYSLMRELRAKSRNEVEVHIDNPKESPIFLAYPSVLKKEDLTNFICDYCRLIIVGNVRS 120
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
YEIE LMDEEI I +KLKPY A+ + E+LPA+GIV A+LG+IKAMG L
Sbjct: 121 YEIEALMDEEIRTIARDKLKPYQAMITISEALPALGIVAAVLGVIKAMGALD 172
>gi|219670207|ref|YP_002460642.1| MotA/TolQ/ExbB proton channel [Desulfitobacterium hafniense DCB-2]
gi|219540467|gb|ACL22206.1| MotA/TolQ/ExbB proton channel [Desulfitobacterium hafniense DCB-2]
Length = 257
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 96/265 (36%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST++G+ I +I GF GG+ L +IV G G + PLK +K
Sbjct: 3 ISTLLGIIIGFGALILGFILEGGHVSSLFLLPPAIIVFGGTFGAVFASFPLKEMKKLSTW 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F K+ G + + L ++
Sbjct: 63 LKIAFTDKSYG---TLEAYETLIRFAEKARREGLLSL-----------------EQELEE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F M+++I G +++ I ++ G P +GI+G
Sbjct: 103 VEDRFTRQGMQLVIDGT-DPDITREILESNIAVMEKRHKVGISVFEAAGGYSPTLGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL+ P L +I + TL G+ + L P+ +++K + +
Sbjct: 162 VMGLVHVLGNLTD-PDSLSKSIAGAFLATLYGVAFANLLYLPIATKLKQKDKIEVASMEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P + E + L
Sbjct: 221 IMDGILSIQAGENPSILKEKLKTHL 245
>gi|254491616|ref|ZP_05104795.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463094|gb|EEF79364.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 246
Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I+GL + I+ G GG+ ++ ++IV G LG ++ P+ +
Sbjct: 3 ILSILGLIVGFGAILLGQQLEGGHLDTILNAVAMLIVLGGTLGAVMLQTPMNTFVRAMRM 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF + VL+ + ++ E+ + +
Sbjct: 63 SIWIFTPPSQSPSV---VLEKILEWNQIARREGLVRLES-----------------VAMD 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ +++I G A I +M+ ++DI + ++ MG P IGI+GA
Sbjct: 103 ETDLFVQKGLQLIADG-AEPELIREVMENDLDIQESDDIQAAKVFEAMGGYSPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I MGNL+ P LG+ I V+ T+ G+ L+ L P+ +++KS ++ R+ ++
Sbjct: 162 VMGLIHVMGNLAD-PSSLGSGIAVAFVATIYGVALANLLFLPMGNKLKSVVAQRSRIQMM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ + LI +G P+ + L
Sbjct: 221 MIEGLIGVADGDNPRNIESRLQAYL 245
>gi|193222294|emb|CAL61488.2| Motility protein A [Herminiimonas arsenicoxydans]
Length = 246
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 106/263 (40%), Gaps = 22/263 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IG+ + + I+ G GG L+QP +IV +G ++ + + +
Sbjct: 5 SLIGIVLALGGILAGQMLEGGKLGSLVQPAAFIIVIVGTIGAVLLQSGWRNFANGLKMAG 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F D Y ++ + ++ E I D +
Sbjct: 65 RVF---VPQDDNYASLMHDVTNWSTVARREGLLSLERMIKDVND---------------- 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ +R+I+ G +++ ++D EI ++ G P IGI+GA+L
Sbjct: 106 -PFVAHGLRLIVDG-VDPHKLREVLDMEIGAYETQQRLSIKIWEAAGGYAPTIGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG+ I V+ T+ G+ + + P++S++K+ + + ++
Sbjct: 164 GLIHVMENLSD-PSRLGSGIAVAFVATIYGVGFANLVFLPISSKLKAIVNRDVFRHEMLA 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVL 265
A G P++ E L
Sbjct: 223 DAFAGIAAGDNPRLIEERMNIYL 245
>gi|89895778|ref|YP_519265.1| hypothetical protein DSY3032 [Desulfitobacterium hafniense Y51]
gi|89335226|dbj|BAE84821.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 257
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 96/265 (36%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST++G+ I +I GF GG+ L +IV G G + PL+ +K
Sbjct: 3 ISTLLGIIIGFGALILGFILEGGHMSSLFLLPPAIIVFGGTFGAVFASFPLREMKKLPTW 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F K+ G + + L ++
Sbjct: 63 LKIAFTDKSYG---TLEAYETLIRFAEKARREGLLSL-----------------EQELEE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F M+++I G +++ I ++ G P +GI+G
Sbjct: 103 VEDRFTRQGMQLVIDGT-DPDITREILESNIAVMEKRHKVGISVFEAAGGYSPTLGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL+ P L +I + TL G+ + L P+ +++K + +
Sbjct: 162 VMGLVHVLGNLTD-PDSLSKSIAGAFLATLYGVAFANLLYLPIATKLKQKDKIEVASMEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P + E + L
Sbjct: 221 IMDGILSIQAGENPSILKEKLKTHL 245
>gi|312134919|ref|YP_004002257.1| mota/tolq/exbb proton channel [Caldicellulosiruptor owensensis OL]
gi|311774970|gb|ADQ04457.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor owensensis OL]
Length = 265
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 22/260 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 3 ILSIGGLILGFSSLLIAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKTAVKH 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K + + +V++ L L +K E I + N
Sbjct: 63 LKMVFMDKKI---DFANVVEQLVQLSDRARKEGLLALEQEIPNLQN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +++ G I +++D E+ + E + G P +GI+G
Sbjct: 106 ---PLLKKGLGLVVDG-IEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYSPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL+ +P LG AI V+ TL G+ + + +IK+ ++ L I
Sbjct: 162 VMGLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIKTKAKQERMLNEI 220
Query: 241 VKKALIAYMNGAIPQVAIEY 260
+ + L++ G P++ E
Sbjct: 221 IVEGLLSIQAGENPRILREK 240
>gi|169825895|ref|YP_001696053.1| chemotaxis protein motA [Lysinibacillus sphaericus C3-41]
gi|168990383|gb|ACA37923.1| Chemotaxis protein motA (Motility protein A) [Lysinibacillus
sphaericus C3-41]
Length = 248
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 106/260 (40%), Gaps = 27/260 (10%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
G + P I+I+ + +A P++ +K +F L D +
Sbjct: 1 MVMKGVSLTAFYNPAAILIIIFGTISAVTIAFPMQELKRVPKLFKILFKETKLAND--IE 58
Query: 78 VLKLLYILMYNLKKGSRNETEN---HIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
++K+ ++ E+ I+DP F+ + + + I
Sbjct: 59 IIKMFSQWADLARREGLLALESKASEIEDP--------------------FLKNGLTLAI 98
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
G Y I +++ EE++ + + G P +G++GA++G+I A+ +++
Sbjct: 99 DGQNADY-IRDVLTEEVEAMEERHASGSAIFTQAGTYAPTLGVLGAVVGLIAALADMND- 156
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+ LG AI + TLLGI Y L +P +++K + + ++ + +++ + G P
Sbjct: 157 IEKLGHAISAAFMATLLGIFTGYVLWHPFANKLKRKSALEVKQKRMMIEGILSVLEGEAP 216
Query: 255 QVAIEYGRKVLPLSERPSIE 274
+V + L + ER I
Sbjct: 217 RVIEQKLSSYLTMEERRQIS 236
>gi|302872093|ref|YP_003840729.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor obsidiansis
OB47]
gi|302574952|gb|ADL42743.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor obsidiansis
OB47]
Length = 265
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 114/277 (41%), Gaps = 22/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I GL + ++ F GNP L+Q +IV G + +++ P+ IK +
Sbjct: 3 ILSIGGLILGFGSLLTAFIIEKGNPAKLLQISAAMIVFGGTIAAVLVSFPMSQIKIAVKH 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F K + + V++ L L +K E I + N
Sbjct: 63 IKMVFMDKKI---DFASVVEQLVQLSDRARKEGLLALEQEIPNLQN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +++ G I +++D E+ + E + G P +GI+G
Sbjct: 106 ---PLLKKGLGLVVDG-IEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYSPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL+ +P LG AI V+ TL G+ + + +IK+ ++ L I
Sbjct: 162 VMGLISVLSNLT-NPDELGPAIAVAFVATLYGVSSANLIWLNFGKKIKTKAKQERMLNEI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ + L++ G P++ E +L + + +
Sbjct: 221 IVEGLLSIQAGENPRILREKIGGMLKEAGQKQSQAQE 257
>gi|28869188|ref|NP_791807.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213967535|ref|ZP_03395683.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|301382872|ref|ZP_07231290.1| flagellar motor protein [Pseudomonas syringae pv. tomato Max13]
gi|302062802|ref|ZP_07254343.1| flagellar motor protein [Pseudomonas syringae pv. tomato K40]
gi|302131301|ref|ZP_07257291.1| flagellar motor protein [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28852428|gb|AAO55502.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213927836|gb|EEB61383.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|330876043|gb|EGH10192.1| flagellar motor protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|330964669|gb|EGH64929.1| flagellar motor protein [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|331016980|gb|EGH97036.1| flagellar motor protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 246
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 110/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+ + +
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMSAFMRAMKII 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 RWIIFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P +GI+GA+
Sbjct: 104 PDNYARKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGGYAPTVGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K +Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKGIAHRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|146307822|ref|YP_001188287.1| flagellar motor protein [Pseudomonas mendocina ymp]
gi|145576023|gb|ABP85555.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
Length = 246
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IG+ + + I+GG Y GG+ L+ +IV G LG + P+ V K + L
Sbjct: 4 LSLIGVILAFVAILGGNYLEGGHAGALLNGPAALIVIGGTLGAAFLQAPVNVFKRAMSIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF + D + +++ M +K E + + E
Sbjct: 64 RWIFFPPRI--DLIGGINRVVGWSMV-ARKEGLLGLEA-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ ++ ++ + MG P IGI+GA+
Sbjct: 104 PDPYARKGLQLLVDG-AEPESIRSILEVDLYTQEARDIQAAKVLESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P +LG+ I V+ T+ G+ + L P +++KS L+Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSMLGSGIAVAFVATIYGVGFANLLLLPAGNKLKSIALRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +++ G P+ + +
Sbjct: 222 LEGILSIAEGENPRSIELKLQGFM 245
>gi|309388828|gb|ADO76708.1| MotA/TolQ/ExbB proton channel [Halanaerobium praevalens DSM 2228]
Length = 270
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 55/289 (19%), Positives = 117/289 (40%), Gaps = 23/289 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL I G +GGN + I ++V G L G +++ + +K+
Sbjct: 3 LATIVGLIAG-AVIFGSVALLGGNVGVFISVQSALVVFGGTLAGVMISYTFEDLKNVPNL 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
F L + V++ L ++ E+ +
Sbjct: 62 FRVSFQDDNLESEH---VIENLVNFAEKARREGLLALEDD-----------------ASK 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G + N+++ ++ + K + MGE PA G+VG
Sbjct: 102 MEDEFLQKGIQLVVDGT-DPELVRNILETKLTFLQERHAKGRGIFATMGELAPAFGMVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + L P LG + V+L TL G +L+ + PL+ +K+ + + +
Sbjct: 161 LIGLIQMLSQLDD-PDQLGGGMAVALITTLYGALLANWIFIPLSKNLKTQSDHEIHVKEV 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
+ + +++ G P++ E L E+ +E E + + A
Sbjct: 220 IIEGILSIQAGENPRIVKEKLHAFLSEGEKQEVESRIGETGEVGAGENA 268
>gi|82775834|ref|YP_402181.1| putative flagellar motor transmembrane channel protein [Shigella
dysenteriae Sd197]
gi|81239982|gb|ABB60692.1| putative flagellar motor transmembrane channel protein [Shigella
dysenteriae Sd197]
Length = 247
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 62/218 (28%), Positives = 112/218 (51%), Gaps = 1/218 (0%)
Query: 66 GYKALGQDTYCDVLKLLYIL-MYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
G++ + ++L+ + + ++ G + HI+ P STIF P VL L T
Sbjct: 25 GHERTSKARIIHQIQLIRGITLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQKRLVT 84
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A+LGI
Sbjct: 85 FIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAAVLGI 144
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L V+
Sbjct: 145 IITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLECVRTV 204
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 205 LVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 242
>gi|71733294|ref|YP_275516.1| flagellar motor protein [Pseudomonas syringae pv. phaseolicola
1448A]
gi|257484888|ref|ZP_05638929.1| flagellar motor protein [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289627958|ref|ZP_06460912.1| flagellar motor protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647093|ref|ZP_06478436.1| flagellar motor protein [Pseudomonas syringae pv. aesculi str.
2250]
gi|298487808|ref|ZP_07005849.1| Flagellar motor rotation protein motA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71553847|gb|AAZ33058.1| chemotaxis protein MotA [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298157900|gb|EFH98979.1| Flagellar motor rotation protein motA [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320325139|gb|EFW81208.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
B076]
gi|320329398|gb|EFW85391.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330866471|gb|EGH01180.1| flagellar motor protein [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330889034|gb|EGH21695.1| flagellar motor protein [Pseudomonas syringae pv. mori str. 301020]
gi|330986515|gb|EGH84618.1| flagellar motor protein [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331011089|gb|EGH91145.1| flagellar motor protein [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 246
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+ + +
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMSAFMRAMKII 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 RWIIFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ +++++ G A I ++++ + ++ MG P +GI+GA+
Sbjct: 104 PDSYARKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGGYAPTVGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K +Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKGIAHRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|237653595|ref|YP_002889909.1| flagellar motor protein [Thauera sp. MZ1T]
gi|237624842|gb|ACR01532.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
Length = 246
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 104/255 (40%), Gaps = 22/255 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++GL + I I+ G GG+ L QP +IV G LG ++ +PL+V
Sbjct: 5 SLVGLTLGIAAILVGQVIEGGHLSSLFQPTAFMIVIGGTLGAVMLQSPLRVFMQGMRMAR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F A DT +++ + +K EN I+ +
Sbjct: 65 WVFVPPAPAFDT---IIEQVANWGQTARKEGLLSLENQIEALSD---------------- 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ +++++ G + +++ EI + + G P IGI+GA++
Sbjct: 106 -PFMRKGLQLLVDG-IEPNRLREVLEVEIGVWENQMKMSARIWEAAGGYAPTIGILGAVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG I V+ T+ G+ + + P+ ++ + + +
Sbjct: 164 GLIHVMENLSD-PSRLGAGIAVAFVATIYGVGFANLVFLPIAKKLGAHIVTLTTQREMFV 222
Query: 243 KALIAYMNGAIPQVA 257
L+ NG P++
Sbjct: 223 DGLVGIANGDNPRII 237
>gi|237799261|ref|ZP_04587722.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|237806230|ref|ZP_04592934.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022117|gb|EGI02174.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027344|gb|EGI07399.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 246
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 110/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+ + +
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMSAFMRAMKIV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + + E
Sbjct: 64 RWIVFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ +++++ G A I ++++ + ++ MG P +GI+GA+
Sbjct: 104 PDSYARKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGGYAPTVGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K +Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAIANLILLPVANKLKGIAHRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|83589324|ref|YP_429333.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
gi|83572238|gb|ABC18790.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
Length = 277
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 103/278 (37%), Gaps = 23/278 (8%)
Query: 11 ILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKAL 70
+I F GG+P L+ +IV G +G ++ + + + L F K L
Sbjct: 15 FGSLIAAFILEGGSPGALLAITAAMIVFGGTIGATLIGLRREEVLNIPRLLKVAFREKPL 74
Query: 71 GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
+ + + +K E + + F+ +
Sbjct: 75 ---DLNETINAIVNYAVLARKEGFVRLEKEL-----------------DGVKDDFLRTAL 114
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
++++ G + N++++ I G P +GI+G ++G++ + N
Sbjct: 115 QLVVDGT-DPEQTRNVLEQYIYATSERHHSGISLFEAAGGYAPTMGIIGTVMGLVHVLSN 173
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
LS +P LG +I ++ TL G+ + L P+ +++K+ ++ ++ + ++A
Sbjct: 174 LS-TPDKLGPSIAMAFIATLYGVSSANLLWLPIATKLKNKDARERLYQEMILEGVLALQA 232
Query: 251 GAIPQVAIEYGRKVL-PLSERPSIEIVAQEVLQYNHNK 287
G P + L P ER +EV +
Sbjct: 233 GKNPTLIRNTLAAFLAPGKERAGAGKEEREVSDGAGPQ 270
>gi|308066933|ref|YP_003868538.1| chemotaxis motA protein (Motility protein A) [Paenibacillus
polymyxa E681]
gi|305856212|gb|ADM68000.1| Chemotaxis motA protein (Motility protein A) [Paenibacillus
polymyxa E681]
Length = 264
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ-PFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
+STIIGL + I+ ++ G G L+ P +I+ MA P+ IK
Sbjct: 3 ISTIIGLVLGIMSLVVGMILKGAPVVNLVNNPAAYMIIFVGTAASIFMAFPMAEIKRIPK 62
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
IF + L +++ ++ E+ +++ +
Sbjct: 63 LFKVIFTEQKLL--DRKELIGTFTEWASITRREGLLALESKVEEIDD------------- 107
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ MRMII GN + + + +++ E+I+ S G P +G++G
Sbjct: 108 ----PFMRGGMRMIIDGNDQEF-VRDVLMEDINATEDRHRSGALIFSQAGMYAPTLGVLG 162
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++G+I A+ +LS + L AI + TLLGI Y L +P+++++K K+ L +
Sbjct: 163 AVVGLIAALADLSDM-EKLSHAIAAAFIATLLGIFTGYVLWHPMSNKLKRLSKKEVELKL 221
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++ + L++ +G + L +ER ++
Sbjct: 222 MMVEGLLSIQSGISTIAISQKLTIFLTPTERATMTQ 257
>gi|302343735|ref|YP_003808264.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301640348|gb|ADK85670.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 254
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 117/273 (42%), Gaps = 23/273 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ ++ GG+ + I P I+IV G +G ++ P++ I
Sbjct: 3 LATIIGIVSAFALVLAAMLY-GGSLTMFIDPASILIVIGGTIGVTLINYPMRDIVKLFSI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F YK + ++ ++ E+ + + +
Sbjct: 62 MKHLFFYKIV---PVGKIISQFVEFATRARREGILALESSMKEVDD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++ I G I+ +++ EID + MG PA+G++G
Sbjct: 105 ---PFLAKGLQLTIDG-LEPASIKEILETEIDYVGERHRLGAEIFMTMGTFAPAMGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+S P +G A+ V++ T G +++ + P++ ++K+ ++ I
Sbjct: 161 LIGLVQMLQNMSD-PSSIGPAMAVAILTTFYGSVMANMIFLPMSGKLKNRSSEEVMTKEI 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ +++ G P+V + +P + R S+
Sbjct: 220 MLNGILSIARGDNPRVIEQKLHSFIPPNLRQSV 252
>gi|309786019|ref|ZP_07680648.1| motA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
1617]
gi|308926130|gb|EFP71608.1| motA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
1617]
Length = 256
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 62/218 (28%), Positives = 112/218 (51%), Gaps = 1/218 (0%)
Query: 66 GYKALGQDTYCDVLKLLYIL-MYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
G++ + ++L+ + + ++ G + HI+ P STIF P VL L T
Sbjct: 34 GHERTSKARIIHQIQLIRGITLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQKRLVT 93
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FI D R++ +G ++E+E ++D+E+D L P ++ E++P GI A+LGI
Sbjct: 94 FIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAAVLGI 153
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I M ++ S ++G + +L GT LG+ + Y L +PL + ++ +H L V+
Sbjct: 154 IITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLECVRTV 213
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
L+A G +A++ GRK+L L+ +P+ + V
Sbjct: 214 LVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNA 251
>gi|83589633|ref|YP_429642.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
gi|83572547|gb|ABC19099.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
Length = 272
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 111/265 (41%), Gaps = 23/265 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++G+ I ++G MGGNP + +++ G ++ + IK+ ++
Sbjct: 8 TVLGIVAGIGLMVGA-LIMGGNPKLFWSVPSLMVTVGGSFAAVLINFSFQDIKNVFGTVK 66
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F + + +++++ L ++ E+ N
Sbjct: 67 QAFTTDLMDPE---ELIEVFGELARKARREGLLALEDD-----------------ANRLE 106
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F ++M++ I +++ ++ + Y G P+ G++G ++
Sbjct: 107 DPFFAKGIQMMVDA-MEPQMIREILETDMAYMARRHEIGYGIFKTWGNLAPSFGLIGTLI 165
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+++ + L + P+ LG ++ ++L T G I++Y + PL ++ ++ L+ ++
Sbjct: 166 GLVQMLAKLDK-PETLGPSMALALITTFYGAIMAYMIFIPLAGKLSLRSEQEMMLHQMML 224
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPL 267
+ +IA +G P++ E+ R L
Sbjct: 225 EGIIAIQSGVNPRILEEHLRSFLAP 249
>gi|121533752|ref|ZP_01665579.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
gi|121307743|gb|EAX48658.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
Length = 260
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 96/252 (38%), Gaps = 22/252 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG+ L V+V G +G + L+ +K L F + +
Sbjct: 21 VLEGGHITSLFSLPAFVLVFGGTIGATAVCFTLEELKSVPALLRIAFKEEKY---DTGQL 77
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ L ++ E + + F+ M+++I G
Sbjct: 78 IATLVGFAEKARREGLLALEEDLAGIED-----------------NFLQKGMQLVIDGT- 119
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+ + ++M+ E+ I K G P +GI+G ++G++ +GNL+ + + L
Sbjct: 120 DAELVRSIMETELTFIQERHHKAASIFETAGGYAPTMGIIGTVMGLVHVLGNLTDT-ESL 178
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G AI + TL G+ + P+ +++K+ +Q + + + +++ G P++
Sbjct: 179 GPAIATAFIATLYGVASANIFFLPIGAKLKNRSSRQVLFHEVTLEGILSVQAGDNPRIVA 238
Query: 259 EYGRKVLPLSER 270
E L +R
Sbjct: 239 EKLAAFLAPKQR 250
>gi|283133059|dbj|BAI63826.1| flagellar motor protein MotC [Pseudomonas syringae pv. tabaci]
Length = 246
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+ + +
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMSAFMRAMKII 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 RWIIFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ +++++ G A I ++++ + ++ MG P +GI+GA+
Sbjct: 104 PVSYARKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGGYAPTVGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K +Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKGIAHRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|150019640|ref|YP_001311894.1| flagellar motor protein MotA [Clostridium beijerinckii NCIMB 8052]
gi|149906105|gb|ABR36938.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
Length = 261
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 113/275 (41%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +IGL ++ ++ G + +L+ I+++ G + + + P
Sbjct: 3 IFLVIGLIGGLVIVVAAMLEKGASLQVLMSAEAILVIIGGTVIALLNSFPKGEFTKLPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F K GQ+ +++ L + ++ E+ I N
Sbjct: 63 FGVLFSAK--GQEDPAEIIAQLVEMSQTTRRDGLLSLESTIQGLENK------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G I+ +++ EI+ + A + G + P +G++GA
Sbjct: 108 ----FMKKGLEMVVDG-LEPDLIKEVLEIEIESMEERHRLGATAFTTAGGTAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + LG +I + T+ GI Y + +P +++K ++ + I
Sbjct: 163 VIGLIGALGNLND-IEKLGESIKSAFVATVYGIFTGYLIWHPFANRLKRKSQEEIKNMNI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A G P+ +L +R E
Sbjct: 222 MLEGILAIQAGNNPKSIERKLVGMLEPKQRVRFEE 256
>gi|78484730|ref|YP_390655.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78363016|gb|ABB40981.1| MotA/TolQ/ExbB family protein [Thiomicrospira crunogena XCL-2]
Length = 258
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 127/251 (50%), Gaps = 2/251 (0%)
Query: 20 AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
GG+ L P E+V++ G GLG F+ + P+ + + L FG + + Y +VL
Sbjct: 1 MAGGSLISLWHPAELVVIIGLGLGVFLGSTPVYIWLKTMTYLGRYFGGGRVNKKIYVEVL 60
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
LL L + ENH+ P +S+IF P +L++ EL FI D +++ +
Sbjct: 61 GLLDELSRLARSQGLLALENHVVAPESSSIFAKYPLILKHKELKKFIVDNFGYLLLNPPQ 120
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--SPKI 197
+ EN + ++I+ I ++ A + +P GI+ A++G+I M L
Sbjct: 121 ALSFENYLHDQIEDITQSMMEVPKATGKIANLMPGFGIIAAVMGVILTMNLLGGDMDVAK 180
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+G +IGV+L GTL GI +++S+ P T ++ + ++++V L A+ +G P +A
Sbjct: 181 IGNSIGVALVGTLTGIFVAFSIIAPFTHAVEVMIRQDKAIFVVVASFLTAFAHGVSPSMA 240
Query: 258 IEYGRKVLPLS 268
+E GR+ +P
Sbjct: 241 LEVGRQRIPAE 251
>gi|119897399|ref|YP_932612.1| flagellar motor protein [Azoarcus sp. BH72]
gi|119669812|emb|CAL93725.1| flagellar motor protein MotA [Azoarcus sp. BH72]
Length = 246
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 105/263 (39%), Gaps = 22/263 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+++GL + + I+ G GG+ L+QP +IV G LG ++ +PL+V K+
Sbjct: 5 SLVGLTLGVAAILIGQAMEGGHIASLLQPTAFLIVIGGTLGAVMLQSPLRVFKEGMRMAK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+F A +++ + + +K E I
Sbjct: 65 WVFITPATSHA---QLIQQVTNWSHVARKEGLLALEAQI-----------------PRLP 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ ++M++ G + +++ EI + + G P +GI+GA++
Sbjct: 105 DPFMRKGLQMLVDG-VEPGRLREVLEVEIGAWEAQLRQCARIWESAGGYAPTVGILGAVM 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG+ I V+ T+ G+ + + P+ ++ + +
Sbjct: 164 GLIHVMENLSD-PAKLGSGIAVAFVATIYGVGSANLIFLPIAKKLLAHIGTLVAQREMFV 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVL 265
L+ NG P++ + +
Sbjct: 223 DGLVGIANGDNPRIIESRMQGYV 245
>gi|114777570|ref|ZP_01452551.1| hypothetical protein SPV1_07681 [Mariprofundus ferrooxydans PV-1]
gi|114552041|gb|EAU54558.1| hypothetical protein SPV1_07681 [Mariprofundus ferrooxydans PV-1]
Length = 252
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 122/272 (44%), Gaps = 25/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ + ++ GG I P ++IV G +G ++ PLK
Sbjct: 3 IATIIGILVAFGLVVSAI---GGGISSFIDPPSMLIVIGGTVGVLLVGYPLKTALSVIGI 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F YK D+ +V+ L L ++K E + + N
Sbjct: 60 VMKTFLYKV---DSGSEVIAKLVELAQTVRKDGILALEGEVGNIDNK------------- 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M I G IE+++ +E+D + + +G P++G++G
Sbjct: 104 ----FMAKGLQMAIDGQ-EPSVIEDILYKEMDKVAERHALGADMFTSLGTYAPSMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S P +G ++ ++L T G +++ L P++ ++K+ ++ ++ I
Sbjct: 159 LVGLVLMLQNMSD-PSSIGPSMSIALLTTFYGALMANILFLPMSGKLKNRSKQEMLVHEI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + + + G P++ + LP ER S
Sbjct: 218 ILVGVQSLVIGENPRIMEQKLLGYLPPKERKS 249
>gi|220932515|ref|YP_002509423.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
gi|219993825|gb|ACL70428.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
Length = 267
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 61/283 (21%), Positives = 122/283 (43%), Gaps = 29/283 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST+IG+ I+ ++GG MGGN I + ++IV G L G +++ +K
Sbjct: 3 LSTLIGILTGIV-LLGGAIIMGGNAVIFLSVQSLMIVLGGTLAGTMVSYSFNELKKIPSL 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F L D D+ L ++ E + + +
Sbjct: 62 IRVAFQEHTLDSDEIIDI---LVGFAEKARREGLLALEQDVMEIND-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G + N+++ ++ + K S MG+ P+ G++G
Sbjct: 105 ---PFLQKGIQLVVDGT-DPELVRNILETKLTFLEERHQKGRGLFSTMGQLAPSFGLIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + L P LG+ + V+L TL G +L+ L NPL +++ L++ L +
Sbjct: 161 LIGLIQMLSQLDD-PTNLGSGMAVALITTLYGALLANLLFNPLAGKLRIRSLEEVLLKEV 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLP------LSERPSIEIVA 277
+ + +++ G P++ E L SE P E +A
Sbjct: 220 MIEGVLSIQAGENPRIVREKLNAFLATERERIASEAPRFEEMA 262
>gi|166711988|ref|ZP_02243195.1| flagellar motor protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 246
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 102/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P +IV + ++ V + + L
Sbjct: 4 LSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFLIVIVGTVAAILLHTSPAVFRRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A +L + ++ E+ + +
Sbjct: 64 RWVIRPPA---SDRPQLLARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + N+++ E+D + L MG P +GI+GA+
Sbjct: 104 DDAFLRKGLQMLVDG-VEPESMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +V
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|58582453|ref|YP_201469.1| flagellar motor protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84624344|ref|YP_451716.1| flagellar motor protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427047|gb|AAW76084.1| MotA protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368284|dbj|BAE69442.1| MotA protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 246
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 102/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P +IV + ++ V + + L
Sbjct: 4 LSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFLIVIVGTVAAILLHTSPAVFRRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A +L + ++ E+ + +
Sbjct: 64 RWVIRPPA---SDRPQLLARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + N+++ E+D + L MG P +GI+GA+
Sbjct: 104 NDAFLRKGLQMLVDG-VEPESMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +V
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|229837432|ref|ZP_04457595.1| Flagellar motor rotation protein motA [Yersinia pestis Pestoides A]
gi|229705555|gb|EEO91565.1| Flagellar motor rotation protein motA [Yersinia pestis Pestoides A]
Length = 210
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 110/192 (57%)
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
+G + HI+ P NS++F P +L++ L TFI D R++ +G +E+E+++++E
Sbjct: 13 EGGLKRLDEHIEIPANSSVFQRYPLILQDLHLITFISDNFRLMAMGKINQHELESILEQE 72
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTL 210
+ + E L P + +GE++P GI A+LGII M ++ S ++G + +L GT
Sbjct: 73 LSAVEEELLVPSRSFQRIGEAMPGFGICAAVLGIIITMQSIDGSIAMIGIKVAAALVGTF 132
Query: 211 LGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
LG+ + Y L +PL++ ++ K+ L+ V+ L+ ++ G +A++ GRK+LP+ +
Sbjct: 133 LGVFICYCLMDPLSNAMEQEIKKKLALFECVRMVLVNHVAGKPSLLAVDAGRKMLPMDNK 192
Query: 271 PSIEIVAQEVLQ 282
P+ + + +
Sbjct: 193 PTFATLDSWINK 204
>gi|254497490|ref|ZP_05110283.1| flagellar motor protein [Legionella drancourtii LLAP12]
gi|254353305|gb|EET12047.1| flagellar motor protein [Legionella drancourtii LLAP12]
Length = 258
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 112/276 (40%), Gaps = 22/276 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
T +GL + L I G GGN + L+ ++IV G LG ++ + L
Sbjct: 4 LTFLGLVTSFLAIFVGQMIEGGNIHSLMNFSALLIVLGGTLGAVLVQTSRHTFVRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF L + ++ L ++ ENH++ E
Sbjct: 64 PWIFKPPQLDFEACR---TRMFELARKARQLGMLSLENHLE-----------------TE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
T + + ++++G I +++ EID + L MG P IGI+GA+
Sbjct: 104 KTPLVNKGLELLVIG-VDKQTIRQVLEAEIDRVESHDLHAAQVFESMGGYSPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+ M +L++ P LG I V+ T+ G+ ++ + P+ +++K+ +Q ++
Sbjct: 163 LGLIQVMRHLAE-PSELGVGIAVAFVATVYGVGMANLVFLPIANKLKACIARQVHYDEMI 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ +++ P + + ++ I+
Sbjct: 222 VEGMVSIAGSESPGILLLKLNNFGQQQKKNEIKKTE 257
>gi|323700141|ref|ZP_08112053.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323460073|gb|EGB15938.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 253
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 113/270 (41%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ TIIG+ ++ ++ G + I + ++IV G +G ++ P+ +
Sbjct: 3 LGTIIGIVLSFGLVLSA-IMTGSSLIIFVSVPSLLIVVGGTIGAGLVNYPMNYVIGVIGV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F D+ +V+ ++ E I + +
Sbjct: 62 IKNTFFSS---LDSPAEVIDRFKDYANRARREGILSLEPLIKEIDD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +++ + G I+ +++ EI + +S +G PA+G++G
Sbjct: 105 ---DYMRKGLQLTVDG-LEPQTIQEILETEISYLAERHATGADVVSALGTLAPAMGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + +S P +G A+ V+L TL G I++ + P+ ++K+ ++ L +
Sbjct: 161 VIGLVQMLQTMSD-PSSIGPAMAVALLTTLYGAIIANLVLMPMAGKLKARSKEEVLLREM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ G P++ E LP +R
Sbjct: 220 IMEGILSISKGENPRIIEEKLNSYLPPKDR 249
>gi|254479610|ref|ZP_05092918.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Carboxydibrachium pacificum DSM 12653]
gi|214034453|gb|EEB75219.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Carboxydibrachium pacificum DSM 12653]
Length = 271
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 114/275 (41%), Gaps = 18/275 (6%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ I + ++ F GG L+ +IV G +G + + L+ IK
Sbjct: 3 IATIVGIIIGVGSLVYAFTLEGGTIGSLLGVSAALIVFGGTIGATITSYSLEDIKKVPAL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++ F + ++ Y +++K L + S E N
Sbjct: 63 LVKAFKDE---KENYMEIIKYFTYLAQKARSEGLLSL-------------ESEIESEEIN 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + + + +++ G+ I+ M+ +I + + K G P +GI+G
Sbjct: 107 KFDPILKECLELVVDGSDMEL-IKTTMENKIYMEDMQAKKEAGIFEAAGGYAPTMGIIGT 165
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + ++S+ P+ LG AI ++ TL G+ + P+ ++K+ + +
Sbjct: 166 VMGLVHVLSSISE-PEKLGPAIAMAFIATLYGVSSANLFWLPIAQKLKNRAKIKTTEREL 224
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++ G P++ + +R +I
Sbjct: 225 ILEGSLSLQAGENPRILERKLLTFITNDKRGTITE 259
>gi|298530632|ref|ZP_07018034.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510006|gb|EFI33910.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 253
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 111/272 (40%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST++G+ I + +GG+P + I +IV G +G ++ PL +
Sbjct: 3 ISTVLGIVIAFG-LFATSITLGGSPAVFINFPAALIVLGGTIGATMVNYPLGHVLGLVGV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F K + + + ++ E I + +
Sbjct: 62 IKHAFMKKV---EDPASITEQFIQYANKARREGILSLEPVIKEVDD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +++ + G I+ +M+ EI I + MG PA+G++G
Sbjct: 105 ---PYLKKGLQLTVDG-MEPQTIQEIMETEISHIEDRHQTGADILGAMGAFAPAMGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
I+G++ + +L P +G A+ ++L T G+IL+ L P++ ++K+ ++ + +
Sbjct: 161 IIGLVLMLQDLDD-PAAIGPAMAIALITTFYGVILANVLFVPMSGKLKTRSKEEILVKEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + ++ G P++ E LP R S
Sbjct: 220 MLEGILCISKGENPRIIEEKFNSYLPPKIRRS 251
>gi|330961245|gb|EGH61505.1| flagellar motor protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 246
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 110/264 (41%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + IIGG + GG+ LI +IV G LG ++ +P+ + +
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALINGPAALIVIGGTLGASLLQSPMSAFMRALKIV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + + E
Sbjct: 64 GWIIFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET-----------------VADAE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P +GI+GA+
Sbjct: 104 PDGYARKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGGYAPTVGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+ +Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAIANLILLPVANKLKAIAHRQSRYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|289208359|ref|YP_003460425.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
gi|288943990|gb|ADC71689.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
Length = 247
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 105/265 (39%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++IG+ + ++ ++GG A G L VIV LG ++ + V
Sbjct: 3 ILSLIGITLGLVAVLGGSIAKGSGLGALWNAAAFVIVVLGTLGATLVQARMAVFLHGMRI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + +L + +K E L +
Sbjct: 63 LPWAFKPPRIDNEA---MLARIVEWSNVARKEGLLGLET-----------------LADE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F +++++ G + I +++ ++D + + MG P +GIVGA
Sbjct: 103 ENDEFARKGLQLLVDG-SEPQTIRQILEADLDNREHFDTQGAKVFESMGVYAPTLGIVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M NL+ P LG I + T+ GI + L P+ +++KS K+ + ++
Sbjct: 162 VMGLMAVMQNLAD-PSKLGAGIAAAFVATIYGIASANLLFLPVANKLKSIIQKRSQHQLM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ + LI+ G P+ +
Sbjct: 221 LMEGLISIAEGENPRNIESKLSGFI 245
>gi|20807042|ref|NP_622213.1| flagellar motor component [Thermoanaerobacter tengcongensis MB4]
gi|20515529|gb|AAM23817.1| Flagellar motor component [Thermoanaerobacter tengcongensis MB4]
Length = 273
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 114/275 (41%), Gaps = 18/275 (6%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ I + ++ F GG L+ +IV G +G + + L+ IK
Sbjct: 5 IATIVGIIIGVGSLVYAFTLEGGTIGSLLGVSAALIVFGGTIGATITSYSLEDIKKVPAL 64
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++ F + ++ Y +++K L + S E N
Sbjct: 65 LVKAFKDE---KENYMEIIKYFTYLAQKARSEGLLSL-------------ESEIESEEIN 108
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + + + +++ G+ I+ M+ +I + + K G P +GI+G
Sbjct: 109 KFDPILKECLELVVDGSDMEL-IKTTMENKIYMEDMQAKKEAGIFEAAGGYAPTMGIIGT 167
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + ++S+ P+ LG AI ++ TL G+ + P+ ++K+ + +
Sbjct: 168 VMGLVHVLSSISE-PEKLGPAIAMAFIATLYGVSSANLFWLPIAQKLKNKAKIKTTEREL 226
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++ G P++ + +R +I
Sbjct: 227 ILEGSLSLQAGENPRILERKLLTFITNDKRGTITE 261
>gi|255527287|ref|ZP_05394167.1| MotA/TolQ/ExbB proton channel [Clostridium carboxidivorans P7]
gi|296188355|ref|ZP_06856747.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Clostridium carboxidivorans P7]
gi|255509025|gb|EET85385.1| MotA/TolQ/ExbB proton channel [Clostridium carboxidivorans P7]
gi|296047481|gb|EFG86923.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Clostridium carboxidivorans P7]
Length = 264
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 101/274 (36%), Gaps = 20/274 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S II + + II GF G L VIV G G + P +++K
Sbjct: 3 ISVIIFVLVGFGSIIAGFVIEKGVIGSLFLLAPAVIVFGGTAGAVGLTFPGEILKRLPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ K + ++ + Y +K E I +
Sbjct: 63 IKVAITPKKIDLSA---LVAYFKDVSYKTRKNGLLSLEGEI---------------SADP 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L FI +++++ G + ++++ E++ K + G P +GI+G
Sbjct: 105 NLDPFIKKGLQLVVDG-VDPQAVRSILELELESTSERHKKGAAIFAQAGGYAPTLGIIGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + +LS P LG I TL G+ + L PL +++K+ K+ +
Sbjct: 164 VMGLVHILADLSD-PNTLGPKIASGFLATLYGLSSANLLFLPLATRLKALDEKEFGEKSL 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + ++ G P E + L E E
Sbjct: 223 IIEGILYIQEGINPNTIAEKLKGFLSKEELKKFE 256
>gi|289678954|ref|ZP_06499844.1| flagellar motor protein [Pseudomonas syringae pv. syringae FF5]
gi|330899453|gb|EGH30872.1| flagellar motor protein [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330976020|gb|EGH76086.1| flagellar motor protein [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 246
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+ + +
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMNAFMRAMKII 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 HWIIFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P +GI+GA+
Sbjct: 104 PDGYSRKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGGYAPTVGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+ +Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAIAHRQARYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|169831940|ref|YP_001717922.1| MotA/TolQ/ExbB proton channel [Candidatus Desulforudis audaxviator
MP104C]
gi|169638784|gb|ACA60290.1| MotA/TolQ/ExbB proton channel [Candidatus Desulforudis audaxviator
MP104C]
Length = 272
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 22/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T++G+F + ++ GF G+ LI P + +V G L + I D SL
Sbjct: 9 TTLLGIFAALSFVVVGFILKDGHLSSLIVPAAMAVVFGCTLSASIATLRKVDISDVFRSL 68
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ ++A ++++ + L ++ EN+++
Sbjct: 69 RMLVHHRAKSP---TEMIEEIVSLAEKARREGLLYLENYLE-----------------GV 108
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++++I G A ++ +++ E+ + + G P +GI GAI
Sbjct: 109 DDLFLRKGLQLVIDG-AEPEVVKGVLETELYALEERHRVAHEFFETAGSFAPTMGIAGAI 167
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GN+ Q P LG AI + TL G++ +Y +C P+ +++K+ K+ L +V
Sbjct: 168 MGLIVALGNI-QEPDKLGPAIASAFVATLYGVVFAYCICFPIATKLKTLTAKEVMLRQLV 226
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
++ +IA +G P + E L + R S + +E
Sbjct: 227 REGVIALQSGNNPIIIRERLNAFLNPNTRASSKKNVEE 264
>gi|170022979|ref|YP_001719484.1| MotA/TolQ/ExbB proton channel [Yersinia pseudotuberculosis YPIII]
gi|169749513|gb|ACA67031.1| MotA/TolQ/ExbB proton channel [Yersinia pseudotuberculosis YPIII]
Length = 201
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 110/192 (57%)
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
+G + HI+ P NS++F P +L++ L TFI D R++ +G +E+E+++++E
Sbjct: 4 EGGLKRLDEHIEIPANSSVFQRYPLILQDLHLITFISDNFRLMAMGKINQHELESILEQE 63
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTL 210
+ + E L P + +GE++P GI A+LGII M ++ S ++G + +L GT
Sbjct: 64 LSAVEEELLVPSRSFQRIGEAMPGFGICAAVLGIIITMQSIDGSIAMIGIKVAAALVGTF 123
Query: 211 LGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
LG+ + Y L +PL++ ++ K+ L+ V+ L+ ++ G +A++ GRK+LP+ +
Sbjct: 124 LGVFICYCLMDPLSNAMEQEIKKKLALFECVRMVLVNHVAGKPSLLAVDAGRKMLPMDNK 183
Query: 271 PSIEIVAQEVLQ 282
P+ + + +
Sbjct: 184 PTFATLDSWINK 195
>gi|302878265|ref|YP_003846829.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302581054|gb|ADL55065.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 246
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 112/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
T++GL + I+ I+ G G N +L Q +IV LG ++ + KV +
Sbjct: 4 LTLLGLLVAIVGILSGQILEGSNLSVLFQGSAFLIVFCGTLGAVMVQSSAKVFLTAIKMG 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F + D++ L +K E I P + +
Sbjct: 64 AWAFSTP---KSAGPDLILQLTSWGTLARKEGMLALEARI------------PGIAD--- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++++ G++ + +I ++++ +I + + P +GI+GA+
Sbjct: 106 --PFMKKGVQLLVDGHS-AEKIRDVLETDIQSWEQLRWQSARVWEAAAGYSPTVGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NLS+ P LG+ I V+ T+ G+ + L P+ +++K+ ++Q + +V
Sbjct: 163 LGLMHVMQNLSE-PSKLGSGIAVAFVATIYGVAFANLLFLPVANKLKAIIMQQTHMRDMV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
L A NG P+ + L
Sbjct: 222 IDGLGAIANGENPRYIELKLQSYL 245
>gi|218231425|ref|YP_002369308.1| flagellar motor protein MotA [Bacillus cereus B4264]
gi|218159382|gb|ACK59374.1| chemotaxis protein MotA [Bacillus cereus B4264]
Length = 264
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATIIGLVLGFVAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|47091648|ref|ZP_00229444.1| chemotaxis protein MotA [Listeria monocytogenes str. 4b H7858]
gi|217965217|ref|YP_002350895.1| chemotaxis protein MotA (Motility protein A) [Listeria
monocytogenes HCC23]
gi|47019967|gb|EAL10704.1| chemotaxis protein MotA [Listeria monocytogenes str. 4b H7858]
gi|217334487|gb|ACK40281.1| chemotaxis protein MotA (Motility protein A) [Listeria
monocytogenes HCC23]
Length = 263
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 46/252 (18%), Positives = 100/252 (39%), Gaps = 20/252 (7%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
+ +L ++++ + +MA+P +K +F + + +V
Sbjct: 1 MIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKLFKILFTKEKMP--DKVEV 58
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
L +++ E+ +D+ + F+ MR+++ G +
Sbjct: 59 LVQYKEYADEIRRSGVLALEDSVDEIED-----------------PFMKRGMRLVVDGQS 101
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+ ++++EE+ + + G P +G++GA +G+I AMG +S +P L
Sbjct: 102 SPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGAAMGLIHAMGEMS-NPDKL 160
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
AI + T+ GI Y L P +++K K+ L ++ + ++A P+V
Sbjct: 161 SEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAPRVVE 220
Query: 259 EYGRKVLPLSER 270
E L E+
Sbjct: 221 ERLLSFLSPKEK 232
>gi|66046661|ref|YP_236502.1| flagellar motor protein [Pseudomonas syringae pv. syringae B728a]
gi|63257368|gb|AAY38464.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|330972461|gb|EGH72527.1| flagellar motor protein [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 246
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+ + +
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMSAFMRAMKII 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 HWIIFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P +GI+GA+
Sbjct: 104 PDGYARKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGGYAPTVGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+ +Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAIAHRQARYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|308273522|emb|CBX30124.1| Uncharacterized 29.3 kDa protein in ccpA 3'region [uncultured
Desulfobacterium sp.]
Length = 249
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 116/270 (42%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+F + MGG + I ++IVAG LG ++ PL I
Sbjct: 3 IATVLGIFSAFGLVFVA-IFMGGGIKLFIDLPSLMIVAGGTLGATMINYPLSEILGVFRV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + + ++++ +++ + + +
Sbjct: 62 VKNAFFTSNIQNEW---LIRIFVGFANRVRREGLLSLDGELSGIKD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++ I G EI+N+++ EID I MG PA+G++G
Sbjct: 105 ---EFLKKGIQLSIDG-LEPQEIKNILETEIDFIRSRHSLGAEIFVTMGTYAPALGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + ++ P +G ++ V+L T G I++ +C P+ ++++ ++ +
Sbjct: 161 LIGLIQMLQSMDD-PGKIGPSMSVALVTTFYGSIMANIICLPIAGKLRTRSKEEILSKEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +I+ NG P++ E + +P R
Sbjct: 220 MIQGVISLSNGDNPRILEERLKVFVPGGRR 249
>gi|296504988|ref|YP_003666688.1| flagellar motor protein MotA [Bacillus thuringiensis BMB171]
gi|296326040|gb|ADH08968.1| flagellar motor protein MotA [Bacillus thuringiensis BMB171]
Length = 264
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATIIGLILGFVAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|302185387|ref|ZP_07262060.1| flagellar motor protein [Pseudomonas syringae pv. syringae 642]
Length = 246
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+ + +
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVVGGTLGASLLQSPMNAFMRAMKII 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 HWIIFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +++++ G A I ++++ + ++ MG P +GI+GA+
Sbjct: 104 PDGYARKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGGYAPTVGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+ +Q R ++
Sbjct: 163 MGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAIAHRQARYREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ L++ G P+ + +
Sbjct: 222 LEGLLSIAEGENPRSIELKLQGFM 245
>gi|292669790|ref|ZP_06603216.1| chemotaxis protein MotA [Selenomonas noxia ATCC 43541]
gi|292648587|gb|EFF66559.1| chemotaxis protein MotA [Selenomonas noxia ATCC 43541]
Length = 268
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 107/273 (39%), Gaps = 21/273 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ + ++ + G G L P +I+ G + ++ + + +
Sbjct: 14 STVIGIIMGLISVFVGMILKGAPLSALNNPAAFLIIIGGTFSCLFIGFRMEQLGNFFNLI 73
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ K +++ L ++ E+
Sbjct: 74 KK--TCKVPQLQEKGQLVQQFIELSQIARREGILALESK-----------------AQEI 114
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F + M+I G + + +++D E+ I+ + + G P +G++GA+
Sbjct: 115 QDPFFRTGLGMVIDGMDPDF-VGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAV 173
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GNL+ LG +I + T+LGI Y L +P +++K ++ ++
Sbjct: 174 VGLIAALGNLND-IDKLGHSIAAAFVATILGIFTGYVLWHPFANKLKIMSEQEVSQKRMI 232
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ +++ G P +P +ER +++
Sbjct: 233 IEGILSLQAGDSPTAIEAKLMVFIPQTEREALK 265
>gi|145298725|ref|YP_001141566.1| flagellar motor component MotA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851497|gb|ABO89818.1| Flagellar motor component MotA [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 252
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL I+CI+GG + GG+P L+ +IV G +G + P V+ +
Sbjct: 2 SLIGLLFAIICILGGNFIEGGHPSALLDLPAFLIVIGGTIGAALTQFPFSVVGKTFKRFK 61
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ L + +LL + N ++ E ID+ +
Sbjct: 62 WLLSPPKL---DMLEQAQLLETMAANARRSGMLALEGMIDEIKD---------------- 102
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ ++M++ G ++ +I +++ EI+ + + MG P +GIVGA+
Sbjct: 103 -PFLKKGVQMMVDGYEKT-KIHEVLENEIEFEHEDLEQTVKFYEAMGGYCPTMGIVGAVF 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I AMG L +P LG AI V+ T+ G+ + + P ++ K +
Sbjct: 161 GLIHAMG-LLDAPDKLGGAIAVAFIATIYGVGAANLIFLPFGNRYKGLAHDIRHYKEMTL 219
Query: 243 KALIAYMNGAI 253
++ ++G
Sbjct: 220 TGILCIVDGES 230
>gi|302389669|ref|YP_003825490.1| MotA/TolQ/ExbB proton channel [Thermosediminibacter oceani DSM
16646]
gi|302200297|gb|ADL07867.1| MotA/TolQ/ExbB proton channel [Thermosediminibacter oceani DSM
16646]
Length = 268
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 104/257 (40%), Gaps = 22/257 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
MGG I ++IV G + ++ PL + + L +F K + + ++
Sbjct: 20 IYMGGPLSAFINIPSMLIVLGGVVASTLINYPLSKLIEVVKILKVVFIEKPMSSE---EI 76
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
++ + L ++ E+ + F+ + M++V
Sbjct: 77 IRTIVNLADIARREGLLALED-----------------TASQVQDDFMKRGI-MLVVDGT 118
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++N+++ E+ + + MG PA G++G I+G+I+ + + P +
Sbjct: 119 DPELVKNILETELAFLEERHKEGQSIFETMGALAPAYGLIGTIIGLIQMLNKIDD-PSAV 177
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G + V+L T G +L+ L P+ ++K ++ + ++ + +++ G P++
Sbjct: 178 GPGMAVALITTFYGAVLANFLFLPIAGKLKVRSKQEILMKEVIIEGILSIQAGENPRIIE 237
Query: 259 EYGRKVLPLSERPSIEI 275
E + L R +++
Sbjct: 238 EKLKAFLAPKVRETLKE 254
>gi|119476295|ref|ZP_01616646.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
gi|119450159|gb|EAW31394.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
Length = 247
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+I G+ + IIGG Y GG+ L VIV G LG ++ P +K + L
Sbjct: 4 LSIFGVILGFAAIIGGNYLEGGSLSALANLPAAVIVLGGTLGAAMLQTPWSGMKLASRRL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ +F + D + +K E + E
Sbjct: 64 IWVFASPTYAFNKGVDKI---VRWAIAARKEGLLGLEA-----------------IAEVE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F +++++ G I +M+ E ++ + MG P IGI+GA+
Sbjct: 104 PDFFARKGLQLLVDG-CEPQNIRAVMEVESVMLEQRDVDAAKFYESMGGYAPTIGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I+ M NLS P LG I ++ T+ G+ L+ L P+ S+++S + ++
Sbjct: 163 MGLIQVMSNLSD-PSKLGAGIAIAFVATIYGVGLANLLLLPIASKLRSIARVEAEFRDLI 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ +I+ G P+ L
Sbjct: 222 IEGIISIAEGENPKAIELKLNGFL 245
>gi|206969904|ref|ZP_03230858.1| chemotaxis protein MotA [Bacillus cereus AH1134]
gi|206735592|gb|EDZ52760.1| chemotaxis protein MotA [Bacillus cereus AH1134]
Length = 264
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATIIGLILGFVAVVVGMVVKGADITALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|116329295|ref|YP_799015.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330098|ref|YP_799816.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122039|gb|ABJ80082.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123787|gb|ABJ75058.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 260
Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++G + +I G + G +P L I+I G G +MA P + G
Sbjct: 5 TVVGFGAACVLMIFGIISAGLSPLDLFDVPSILITFGGATAGTIMAVPWESTLAVGKVTQ 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
++F + +++K L ++ E+ + N
Sbjct: 65 KVFKTEKH---DLIELIKTLVSFSEKARREGLLALEDDV-----------------NELP 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ + +++ G + N+M+ E+ I + G PA G++G ++
Sbjct: 105 DEFLRKGITLVVDGT-DPELVRNIMETEMGNIASRHNNGKAWWENWGALAPAFGMIGTLI 163
Query: 183 GIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
G+++ + NL S P +GT + +L TL G + + P+ ++ + + I+
Sbjct: 164 GLVQMLKNLGSGDPSAIGTGMAAALITTLYGSMGANMFAIPVMKKLMRKSEDELTIKQIM 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++ +G P++ + LP SER
Sbjct: 224 IEGTLSIQSGDNPRIVKDKLSSFLPPSER 252
>gi|1170997|sp|P46826|YTXD_BACME RecName: Full=Uncharacterized 29.3 kDa protein in ccpA 3'region;
AltName: Full=ORF1
gi|415665|gb|AAA22296.1| homologue to motA; ORF1; putative [Bacillus megaterium]
Length = 267
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 54/285 (18%), Positives = 115/285 (40%), Gaps = 25/285 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M T IG+ I I ++ G + GGN I I+IV G G ++ PLK +K+ G
Sbjct: 6 MLTPIGILIGISMVVFGVISSGGNERFLAFIDVPSILIVLGGVFGTLCVSFPLKQLKNMG 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F K + + +++ L ++ E ++ +S + I
Sbjct: 66 RVGKQAFQSKEINVE---EIVGTFVHLSEKARREGLLSLEAELEQIDDSFVKKGI----- 117
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + I L++ EI + + G+ PA G++
Sbjct: 118 -------------LLAIDGVEPEMIRELLEAEIATVEERHARGRSMFEKAGDYAPAWGMI 164
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ + +L+ +P LG + ++L T G +LS P+ +++ + +
Sbjct: 165 GTLVGLVLMLKSLN-TPSSLGPDMAIALLTTFYGALLSNLFFQPIAAKLAGKTEHELFVK 223
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
++ + +I + G + ++ KV E+ +E + V +
Sbjct: 224 EVIIEGVIGLLAGQNSRF-VQAKLKVFAPVEKRKLEEKREHVREA 267
>gi|242281266|ref|YP_002993395.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242124160|gb|ACS81856.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 253
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 112/271 (41%), Gaps = 23/271 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IG+ ++ ++ +G + I I ++IV G +G ++ P+ +
Sbjct: 3 LGTVIGIVLSFGLVLSA-ILVGSSLAIFISVPSVLIVIGGTIGASLVNYPMGHVLGVVGV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F ++ +++ ++ E + +
Sbjct: 62 IKKTFFSS---LESPGEIIDKFMDFANRARREGILSLEPALKSIED-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++ + G I+ +++ EI + + + PA+G++G
Sbjct: 105 ---DFLRKGLQLTVDG-LEPQVIQEILETEIQYLENRHETGAEILKVFADFAPAMGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + +S P +G A+ V+L TL G IL+ + P++ ++K+ ++ L +
Sbjct: 161 VIGLVQMLQTMSD-PSTIGPAMAVALLTTLYGAILANLVFTPMSGKLKTRSKEEILLREM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
V + +I+ G P++ E LP R
Sbjct: 220 VMEGIISISKGENPKIIEEKLNSFLPPKIRK 250
>gi|228960777|ref|ZP_04122415.1| hypothetical protein bthur0005_42340 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048217|ref|ZP_04193786.1| hypothetical protein bcere0027_41860 [Bacillus cereus AH676]
gi|229111974|ref|ZP_04241518.1| hypothetical protein bcere0018_42180 [Bacillus cereus Rock1-15]
gi|229147070|ref|ZP_04275430.1| hypothetical protein bcere0012_42080 [Bacillus cereus BDRD-ST24]
gi|228636458|gb|EEK92928.1| hypothetical protein bcere0012_42080 [Bacillus cereus BDRD-ST24]
gi|228671538|gb|EEL26838.1| hypothetical protein bcere0018_42180 [Bacillus cereus Rock1-15]
gi|228723204|gb|EEL74580.1| hypothetical protein bcere0027_41860 [Bacillus cereus AH676]
gi|228798912|gb|EEM45888.1| hypothetical protein bthur0005_42340 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 266
Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLILGFVAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|302873042|ref|YP_003841675.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|307688802|ref|ZP_07631248.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|302575899|gb|ADL49911.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
Length = 260
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 106/278 (38%), Gaps = 21/278 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ TI+ L +I GF G L+Q +I+ G G ++ P ++ K
Sbjct: 3 IFTIVSLIFAFGSLIVGFLLEEGQLSALVQVSAFIIIFGGTFGAVAVSFPGRIFKKFPKV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++ + ++ E + N+
Sbjct: 63 LAIAFKKR---DSKIGENIRYFKEISIRTRREGLLILEGEV----------------TND 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI ++ G +S I+ +++ E++ + + S G P +GI+G
Sbjct: 104 GIDPFIKKGFQLAADGTEQS-VIQGILETELEQMADRHDEGIEMFSAAGGYSPTMGIIGT 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + NL P LG I + TL GI ++ P+ +++K ++ +
Sbjct: 163 VMGLLQVVANLDD-PLALGVKIAAAFMATLYGIAMANLFWLPIANKLKMLNKEEINEKQM 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+ +A++ G+ + + ++ S+ Q
Sbjct: 222 IIEAVLLIQQGSNTNSLVSKLEGYMLDDDKKSLLEDKQ 259
>gi|56963748|ref|YP_175479.1| flagellar motor protein MotA [Bacillus clausii KSM-K16]
gi|56909991|dbj|BAD64518.1| motility protein A [Bacillus clausii KSM-K16]
Length = 268
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 60/277 (21%), Positives = 115/277 (41%), Gaps = 21/277 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++ IG+F+ I +I G G + +L+ P IVI+ + ++A P IK
Sbjct: 4 TSFIGIFLGIGTVIFGVILKGSSLEVLLNPAAIVIIIIGTIAAVLIAFPFSDIKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + ++++ ++ E+ I+D +
Sbjct: 64 GVLLSERKETSQH--EIVEKFVEYATISRRDGMLALESKIEDIDD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F RM+I G + I + + E ID + S G P++G++GA+
Sbjct: 107 --PFFQQATRMMIDGQDPDF-IRHTLHERIDAMQERHATGAAIFSQAGTYSPSLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I A+GNL LG +I + TLLGI Y L +P ++++ + ++
Sbjct: 164 LGLISALGNLDD-INKLGESIAAAFVATLLGIFFGYVLWHPFANKLRRKSKIEVLNQHMI 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+ IA +NG+ P+ EY + ++ + + A+
Sbjct: 223 IEGTIAIINGSSPRAVEEYLSVYMEEKKQKAYKEGAE 259
>gi|228923255|ref|ZP_04086545.1| hypothetical protein bthur0011_42350 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228954781|ref|ZP_04116802.1| hypothetical protein bthur0006_41490 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229081764|ref|ZP_04214257.1| hypothetical protein bcere0023_43930 [Bacillus cereus Rock4-2]
gi|229152705|ref|ZP_04280892.1| hypothetical protein bcere0011_42390 [Bacillus cereus m1550]
gi|229180777|ref|ZP_04308115.1| hypothetical protein bcere0005_41210 [Bacillus cereus 172560W]
gi|229192710|ref|ZP_04319669.1| hypothetical protein bcere0002_43610 [Bacillus cereus ATCC 10876]
gi|228590800|gb|EEK48660.1| hypothetical protein bcere0002_43610 [Bacillus cereus ATCC 10876]
gi|228602755|gb|EEK60238.1| hypothetical protein bcere0005_41210 [Bacillus cereus 172560W]
gi|228630768|gb|EEK87410.1| hypothetical protein bcere0011_42390 [Bacillus cereus m1550]
gi|228701609|gb|EEL54102.1| hypothetical protein bcere0023_43930 [Bacillus cereus Rock4-2]
gi|228804901|gb|EEM51499.1| hypothetical protein bthur0006_41490 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228836461|gb|EEM81812.1| hypothetical protein bthur0011_42350 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 266
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLILGFVAVVVGMVVKGADITALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|30022591|ref|NP_834222.1| flagellar motor protein MotA [Bacillus cereus ATCC 14579]
gi|229129796|ref|ZP_04258763.1| hypothetical protein bcere0015_42370 [Bacillus cereus BDRD-Cer4]
gi|29898149|gb|AAP11423.1| Chemotaxis motA protein [Bacillus cereus ATCC 14579]
gi|228653712|gb|EEL09583.1| hypothetical protein bcere0015_42370 [Bacillus cereus BDRD-Cer4]
Length = 266
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLILGFVAVVVGMVVKGADITALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSSAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|182418467|ref|ZP_02949761.1| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237666315|ref|ZP_04526300.1| chemotaxis protein MotA [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377849|gb|EDT75393.1| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237657514|gb|EEP55069.1| chemotaxis protein MotA [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 272
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 107/276 (38%), Gaps = 23/276 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN-PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
M T IGL + I + G + G + ++ + I G L ++ P+ K G
Sbjct: 6 MLTAIGLLLGIGMMFYGMASGGLSEMHLFWDAPSVAITIGGSLAAVMIVTPMSEFKKIGT 65
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
++ F + + + L +K E+ I++ +
Sbjct: 66 LFVQAFKEPSSSS---IETIAKFSELSRKARKEGLLSLEDAINNLDDK------------ 110
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ ++M++ G I+ +++ EI + G P G++G
Sbjct: 111 -----FLKKGLQMVVDG-IEPESIKEILELEILGMETRHGNGASIFKTWGAFAPGFGMLG 164
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+I+ +GNLS + + +G +L T G +L+ + +P+ + + + +
Sbjct: 165 TLIGLIQMLGNLSD-ASTIASGMGKALITTYYGSLLANLIASPIAQNLSAKSAYEVNMRE 223
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++ + +IA +G P++ + L SER
Sbjct: 224 MMVEGIIAIQSGVNPRIVEDKLISYLSPSEREEYSK 259
>gi|15893596|ref|NP_346945.1| chemotaxis motility protein A, gene motA [Clostridium
acetobutylicum ATCC 824]
gi|15023147|gb|AAK78285.1|AE007545_2 Chemotaxis motility protein A, gene motA [Clostridium
acetobutylicum ATCC 824]
gi|325507716|gb|ADZ19352.1| Chemotaxis motility protein A, gene motA [Clostridium
acetobutylicum EA 2018]
Length = 262
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 102/265 (38%), Gaps = 20/265 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M +I+ + + ++ +I GF GG+ LI +IV G +G + P+ IK G
Sbjct: 1 MDSIVFVLVALVSVIVGFIIDGGSVINLIHVSPAIIVFGGTIGAVGTSFPIGDIKKLGSI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + ++ + + +K E I +
Sbjct: 61 VKVALSKP---KSDLPALIAYFKQIAFKTRKEGLLSIEEMI----------------SDE 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ FI ++M++ G +++ ++ +++I G P +GI+G
Sbjct: 102 SVDPFIKKGLQMVVDG-IEPQTVKDTLELSVELIEERHNMGASIFQAAGGYAPTLGIIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ ++ + NLS LG +I + TL GI + + P+ +++K + + +
Sbjct: 161 VCSLVVVLANLSSDTSQLGESISSAFLATLYGISSANLVYLPIANKLKRYNAIEIQEKNL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ +A++ G P E + L
Sbjct: 221 IIEAILCIQEGINPNTLDEKLKGFL 245
>gi|329904711|ref|ZP_08273912.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
gi|327547855|gb|EGF32613.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
Length = 246
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 99/262 (37%), Gaps = 22/262 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++ GL + +L I+ G GG L+QP VIV G ++ + +K
Sbjct: 5 SVAGLVLALLGILVGQLLEGGRLGSLVQPTAFVIVMVGTFGAVLLQSGWPTVKRGVRMAA 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
F + D + + + ++ E +D+ +
Sbjct: 65 AAFRNQ---PDLHRLHAADVAMWSQTARREGLLSLERFMDNSDD---------------- 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
FI +R++ G Y++ ++ EI + K G P IGI+GA+L
Sbjct: 106 -PFITKGLRLLTDG-IDPYKLREILGIEISSYETRERKAARIWDAAGGYAPTIGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG I V+ T+ G+ L+ + P+ ++K+ + ++
Sbjct: 164 GLIHVMENLSD-PSRLGAGIAVAFVATIYGVGLANLVFLPIGGKLKTAVNDEVTRLEMLA 222
Query: 243 KALIAYMNGAIPQVAIEYGRKV 264
A +G P E +
Sbjct: 223 DAFCCIASGDNPISIEERMKAY 244
>gi|303240001|ref|ZP_07326523.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
gi|302592480|gb|EFL62206.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
Length = 268
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 116/274 (42%), Gaps = 23/274 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ + CII GG+ +V+V G G+ +++ L +K
Sbjct: 3 IATIIGVIFGLFCIIWSILL-GGSILTFWDLPSVVVVVGGGIAASLISYKLAEVKLIMKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++++F K D +K + L ++ E ++ +
Sbjct: 62 VVKVFIGKESSP---IDTIKQMIELSQKARRDGLLSLEAEQENIKD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++++ G I MD EI+ + K M PA G++G
Sbjct: 105 ---EFLKESLQLVVDG-VEPEIIVESMDLEIENMKARHDKGTGLFKTMAAQFPAWGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + +L P +G A+ V+L T G +L+ +CNP+ +++ ++ R +
Sbjct: 161 LIGLIQLLKSLDD-PSKIGPAMAVALITTFYGSVLANFICNPIANKLSLKSKEEIREKRM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + +++ G P++ + L ++ E
Sbjct: 220 VIEGVLSIQAGENPKILEHKLKTFLSPKQKHEYE 253
>gi|304405742|ref|ZP_07387400.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
gi|304344985|gb|EFM10821.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
Length = 267
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 118/278 (42%), Gaps = 22/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQ-PFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
ST IG+ + ++ I+ G Y G L+ P +I+ + PL IK
Sbjct: 4 STGIGIGLGLVAIVVGMYLKGAPIVNLVNNPAAYIIILVGTAASLFVGFPLVEIKKFPTL 63
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF + L D+++L ++ E +D+ +
Sbjct: 64 IKIIFSNQNLPARQ--DLIRLFMEWATITRREGLLALEAKVDEIED-------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + MRMII GN + + + +++ E+I S G P +G++GA
Sbjct: 108 ---AFLRNGMRMIIDGNDQDF-VRDVLLEDISATEDRHKSGALIFSQAGMYAPTLGVLGA 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+ ++S + L AI + TLLGI Y L +P+++++K ++ + ++
Sbjct: 164 VIGLIAALADMSDM-EKLSHAIAAAFIATLLGIFTGYVLWHPISNKLKRLSKRETEIRLM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+ + L++ G + L +ER ++ +
Sbjct: 223 MVEGLLSIQTGVSTIAINQKLSVYLTPTERANMLAKEE 260
>gi|294501553|ref|YP_003565253.1| putative flagellar motor channel protein [Bacillus megaterium QM
B1551]
gi|294351490|gb|ADE71819.1| putative flagellar motor channel protein [Bacillus megaterium QM
B1551]
Length = 267
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 53/285 (18%), Positives = 113/285 (39%), Gaps = 25/285 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M T IG+ I I ++ G + GG I I+IV G G ++ PLK +K+ G
Sbjct: 6 MLTPIGILIGISMVVFGVISSGGMSGFLAFIDVPSILIVLGGVFGTLCVSFPLKQLKNMG 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F K + + +++ L ++ E ++ +S + I
Sbjct: 66 KVGKQAFQSKEINVE---EIVGTFVHLSEKARREGLLSLEAELEQIDDSFVKKGI----- 117
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + I L++ EI + + G+ PA G++
Sbjct: 118 -------------LLAIDGVEPEMIRELLEAEIAAVEERHARGRSMFEKAGDYAPAWGMI 164
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ + +L+ +P LG + ++L T G +LS P+ +++ + +
Sbjct: 165 GTLVGLVLMLKSLN-TPSSLGPNMAIALLTTFYGALLSNLFFQPIAAKLAGKTEHELFVK 223
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
++ + +I G + ++ KV E+ +E + V +
Sbjct: 224 EVIIEGVIGLQAGQNSRF-VQAKLKVFAPVEKRKLEEKREHVREA 267
>gi|325923842|ref|ZP_08185451.1| flagellar motor component [Xanthomonas gardneri ATCC 19865]
gi|325545676|gb|EGD16921.1| flagellar motor component [Xanthomonas gardneri ATCC 19865]
Length = 246
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 101/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+IIGL + I+ I+GG G L P +IV + ++ V + + L
Sbjct: 4 LSIIGLLLAIVAIVGGSVLKGAGISSLWSPAAFLIVIVGTVAAILLHTSPAVFRRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A +L + ++ E+ + +
Sbjct: 64 RWVIQPPA---SDRPQLLARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+
Sbjct: 104 DDAFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMA 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|289662353|ref|ZP_06483934.1| flagellar motor protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 246
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 101/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P +IV + ++ V + + L
Sbjct: 4 LSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFLIVIVGTVAAILLHTSPAVFRRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A +L + ++ E+ + +
Sbjct: 64 RWVIQPPA---SDRPQLLARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+
Sbjct: 104 DDAFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMA 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|325916149|ref|ZP_08178435.1| flagellar motor component [Xanthomonas vesicatoria ATCC 35937]
gi|325537640|gb|EGD09350.1| flagellar motor component [Xanthomonas vesicatoria ATCC 35937]
Length = 246
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+IIGL + I+ I+GG G L P VIV + ++ V + + L
Sbjct: 4 LSIIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A ++ + ++ E+ + P S
Sbjct: 64 RWVIQPPA---SDRPQLVARIVEWSNIARRQGLLGLEDQL--PRQS-------------- 104
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+
Sbjct: 105 -DAFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMA 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|289667243|ref|ZP_06488318.1| flagellar motor protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 246
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P +IV + ++ V + + L
Sbjct: 4 LSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFLIVIVGTVAAILLHTSPAVFRRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A +L + ++ E+ + +
Sbjct: 64 RWVIQPPA---SDRPQLLARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + N+++ E+D + L MG P +GI+GA+
Sbjct: 104 DDAFLRKGLQMLVDG-VEPEAMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +Q+KS +V
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAQLKSVIHCSTNEREMV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|28211322|ref|NP_782266.1| chemotaxis motA protein [Clostridium tetani E88]
gi|28203762|gb|AAO36203.1| chemotaxis motA protein [Clostridium tetani E88]
Length = 276
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 109/278 (39%), Gaps = 28/278 (10%)
Query: 2 STIIGLFITILCIIGGFYAMG------GNPYILIQPFEIVIVAGAGLGGFVMANPLKVIK 55
T IG+ + L ++ + G + I+I G L ++ PL K
Sbjct: 7 LTAIGIVVGFLMMVWAMAMVTITEYNVGQLKLFWDISSIIITVGGSLCAMLVNYPLHQFK 66
Query: 56 DSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT 115
++ F + + D++ L ++ E+ I
Sbjct: 67 KLMKITIQAFK---ENEKSGIDIINQFIDLSRKARREGLLSLEDEI-------------- 109
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
+ F+ ++M++ G I+++MD EI + + + G PA
Sbjct: 110 ---SGINDDFLKKGLQMVVDG-IEPETIQDIMDLEIGEMERRHGEGVDMLKAWGAYAPAF 165
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G+ G ++G+I+ +GNL++S + + + +L TL G +++ + NP+ + + ++
Sbjct: 166 GMAGTLIGLIQMLGNLNES-GQIASGMSKALITTLYGSLMANIVFNPMAANLSLKSQQEI 224
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ ++ + ++A +G P++ E L ER
Sbjct: 225 AVREMMLEGILAIQSGVNPRIVEEKLISYLSPEERQKY 262
>gi|317121530|ref|YP_004101533.1| MotA/TolQ/ExbB proton channel [Thermaerobacter marianensis DSM
12885]
gi|315591510|gb|ADU50806.1| MotA/TolQ/ExbB proton channel [Thermaerobacter marianensis DSM
12885]
Length = 285
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 100/265 (37%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G + I ++ GG L+ P ++V G LG + + L ++ +
Sbjct: 3 LGTVAGFVLAIAAVLIANVMEGGELRQLLNPSASLLVFGGTLGATLASAGLANVRLVPAA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L L +++ + L ++ E N
Sbjct: 63 ILYALRPPRLEPR---QLIEKMVQLAQQARREGLLSLEEE-----------------RKN 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F ++ +I G A +E +M I+ L + G P +GI+G
Sbjct: 103 LDDPFFAKGLQFVIDG-ADPEMVEEVMANAIEAEQRHHLVAAGVLETAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I +GNL + LG AI V+ T GI + L PL ++IK+ + + +
Sbjct: 162 VLGLIHVLGNLEDT-SKLGPAIAVAFMATFYGIATANLLWLPLANKIKANVQAETEVRRM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
V + +++ G P + E L
Sbjct: 221 VVEGVLSIQRGDNPMIVREKLEAFL 245
>gi|71279290|ref|YP_268266.1| chemotaxis MotA protein [Colwellia psychrerythraea 34H]
gi|71145030|gb|AAZ25503.1| chemotaxis MotA protein [Colwellia psychrerythraea 34H]
Length = 248
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 104/263 (39%), Gaps = 22/263 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+I GL I IL + GF GG+ L + +IV G LG ++ + + + L
Sbjct: 4 LSIAGLTIAILAVYIGFSLDGGHLSALFELPAFIIVFGGTLGAVMLQSSMVQFTHAISLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + I ++ E+ + +S + +++ E
Sbjct: 64 KWVFYPPKY---DIEQGISEIVIWATKAREKGYLALEDTALEIEDSYTQKGLNLLVDGIE 120
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L F ++ ++DI L+ + MG P IGI+GA+
Sbjct: 121 LENF------------------RVALELDLDIYREHNLRSANVYEAMGGYSPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I AM NL++ P +LG I + T+ G+ + P+ ++I++ +Q ++
Sbjct: 163 LGLIHAMSNLTE-PALLGQGIATAFIATIYGVGFANLFYLPIANKIRAIVHEQTMYREMI 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKV 264
+ L++ +G P
Sbjct: 222 CEGLVSIAHGENPHAIENKLSAF 244
>gi|66768609|ref|YP_243371.1| flagellar motor protein [Xanthomonas campestris pv. campestris str.
8004]
gi|66573941|gb|AAY49351.1| MotA protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 246
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 101/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P +IV + ++ V + + +
Sbjct: 4 LSLIGLVLAIVAIVGGSVLKGAGISSLWSPAAFLIVIVGTVAAILLHTSPAVFRRAFKIV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A +L + ++ E+ + +
Sbjct: 64 RWVIQPPA---SDRPQLLARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+
Sbjct: 104 DDAFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMA 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|285018159|ref|YP_003375870.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
gi|283473377|emb|CBA15882.1| probable flagellar motor protein [Xanthomonas albilineans]
Length = 246
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 101/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ +IGG G L P VIV ++ P V + +
Sbjct: 4 LSLIGLLLAIISLIGGSILKGAGISALWSPAAFVIVIVGTFAAILVQTPPMVFRRAFKIA 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + VL+ + ++ E + +S
Sbjct: 64 KWILQPPPNNRQA---VLQQIVEWSNIARRQGLLGLEQELPQQQDS-------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G I ++++ +++ + L MG P +GI+GA+
Sbjct: 107 ---FVRKGLQMLVDG-VEPDAIRHMLEIDLEGQAHRDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NL+ P LG I + T T+ GI + L P+ S++KS ++
Sbjct: 163 LGLIAVMKNLAD-PSKLGQGIAAAFTATIYGIASANLLFLPMASKLKSVIKHSSGEREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAKGENPRNIEAKLAGFL 245
>gi|188991573|ref|YP_001903583.1| flagellar motor protein [Xanthomonas campestris pv. campestris str.
B100]
gi|167733333|emb|CAP51532.1| Flagellar motor component MotA [Xanthomonas campestris pv.
campestris]
Length = 246
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 103/264 (39%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P VIV + ++ V + + +
Sbjct: 4 LSLIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAFKIV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A ++ +L + ++ E+ + +
Sbjct: 64 RWVIQPPASDRER---LLARIVEWSNIARRQGLLGLEDQL-----------------GRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+
Sbjct: 104 DDAFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +
Sbjct: 163 LGLMAVMKNLAD-PSMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMA 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|323490129|ref|ZP_08095349.1| flagellar motor protein MotA [Planococcus donghaensis MPA1U2]
gi|323396177|gb|EGA89003.1| flagellar motor protein MotA [Planococcus donghaensis MPA1U2]
Length = 256
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 109/262 (41%), Gaps = 21/262 (8%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ + +IGG G NP L P +VI+ + ++A P+ IK IF
Sbjct: 1 MGFVVLIGGMILKGSNPIALYNPAALVIIFAGTIACLLVAFPMDEIKKIPSLFKVIF--S 58
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ +++ + +K E ++ + F+
Sbjct: 59 EQKKIPVKEMIPMFTGWAMLARKEGLLALEEKSEEVED-----------------PFLQR 101
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
++M++ G ++ + I +LM+EEI + + G P +G++GA++G++ A+
Sbjct: 102 GLKMVVDGQSQEH-IRDLMEEEIAAMEERHELGAKIFAQAGTYAPTLGVLGAVIGLVAAL 160
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
G+L +LG +I + TL GI Y L +P +++K + + +I+ + L+A
Sbjct: 161 GHLDDV-ALLGKSISAAFIATLFGIFSGYVLWHPFANKLKRKSEAEVKTKMIMLEGLLAV 219
Query: 249 MNGAIPQVAIEYGRKVLPLSER 270
G + E LP +R
Sbjct: 220 QEGLPVRTVEEKLLTYLPAKDR 241
>gi|150021175|ref|YP_001306529.1| MotA/TolQ/ExbB proton channel [Thermosipho melanesiensis BI429]
gi|149793696|gb|ABR31144.1| MotA/TolQ/ExbB proton channel [Thermosipho melanesiensis BI429]
Length = 262
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 119/282 (42%), Gaps = 22/282 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ + G+ + + +I G + GG+ I IVIV G +G V ANP +
Sbjct: 3 IALLGGVGLAFVMVIYGIISGGGDFAAFINIPSIVIVIGGSIGAAVAANPKDIAFKFVQV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LE + Y ++L+ L L ++ E +I+
Sbjct: 63 TLEALKEP---KTDYVNLLRTLVSLSEKARREGLLSLEENIE-----------------Q 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G ++++M+ EI++ E +G PA G++G
Sbjct: 103 LDDPFMKKGLQLLVDGT-EPEVLKSMMEIEIEVASNEMNLKKGLFEAIGAYAPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + +L+ P LG ++ V+L TL G I++ + P+ ++ L +
Sbjct: 162 LIGLIQMLKSLND-PNSLGPSMAVALITTLYGSIMANAFALPIAEKMGKRVLNTELEKNM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+ + +++ G P++ E + LP + + E QE
Sbjct: 221 ILEGILSIQAGENPRILEEKLKAFLPQAAKAQYEASTQEANA 262
>gi|260886727|ref|ZP_05897990.1| chemotaxis protein MotA [Selenomonas sputigena ATCC 35185]
gi|260863579|gb|EEX78079.1| chemotaxis protein MotA [Selenomonas sputigena ATCC 35185]
Length = 283
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 106/269 (39%), Gaps = 21/269 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IGL ++ I GG G L P +I+ A + +K +
Sbjct: 29 STLIGLLSGLIAIFGGMILKGAPISSLNNPAAFMIIILGTFACLFTAFRMDEMKMLPKLI 88
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F Q ++L+L L ++ E+ ++D +
Sbjct: 89 KMTFQAPPSHQ--KGELLQLFIELSQIARREGILALESRVEDISD--------------- 131
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F + M+I G + + +++D EI ++ + G P +G++GA+
Sbjct: 132 --PFFKTGLSMVIDGMDPDF-VSDVLDAEISVMQERHSLGRLMLMQAGTYAPTLGVLGAV 188
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ NLS ++G AI + T+LGI +Y L P +++K + ++
Sbjct: 189 IGLIAALSNLSDV-NVVGHAIAAAFVATILGIYTAYVLWLPWANKLKIMSDSEIGQKRMI 247
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ G P +P SER
Sbjct: 248 VEGILSLQAGDSPTAIEAKLMVFIPQSER 276
>gi|325928223|ref|ZP_08189429.1| flagellar motor component [Xanthomonas perforans 91-118]
gi|325541412|gb|EGD12948.1| flagellar motor component [Xanthomonas perforans 91-118]
Length = 246
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 101/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P VIV + ++ V + + L
Sbjct: 4 LSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A ++ + ++ E+ + +
Sbjct: 64 RWVIQPPA---SDRPQLVARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+
Sbjct: 104 DDAFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMA 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|220934516|ref|YP_002513415.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219995826|gb|ACL72428.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 246
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 102/265 (38%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++IG+ + ++ IIGG A G L VIV + +M LKV +
Sbjct: 3 ILSLIGVLLALVAIIGGSIAKGSGLEALWNAAAFVIVVVGTIAAALMQTRLKVFMHALKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + ++ L +K E L
Sbjct: 63 FPWVFMAPRIDTEA---AIEKLVNWSQIARKEGLLGLET-----------------LAEQ 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F +++++ G I N+++ +++ L+ MG P +GI+GA
Sbjct: 103 EPDAFSAKGLQLLVDGT-EPEAIRNILEVDLNTREQFDLQGAKVYESMGVYAPTLGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ M NL+ P LG I + T+ GI + P+ +++K+T Q +
Sbjct: 162 VMGLMAVMQNLAD-PSRLGAGIAAAFVATIYGIASANLFFLPVGNKLKNTVQSQSAYREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ +I+ G P+ R +
Sbjct: 221 IIDGIISIAEGENPRNIETKLRGYM 245
>gi|238924160|ref|YP_002937676.1| motility protein A [Eubacterium rectale ATCC 33656]
gi|238875835|gb|ACR75542.1| motility protein A [Eubacterium rectale ATCC 33656]
Length = 263
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 110/276 (39%), Gaps = 24/276 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL--IQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
+++++G+ + I ++ G GG P +L + +I G L + +N L
Sbjct: 3 IASLLGVILGIGMVLFGIIQNGGVPALLNFLDAPSAIITIGGSLSAVLCSNKLSGFIAGI 62
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
S F K++ + + + L +K E
Sbjct: 63 KSFALPFKEKSVDP---GETINKIIELSNVSRKEGLLALEEA-----------------A 102
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ F+ + M++V + + +++ ++ + K GE PA G++
Sbjct: 103 GSIDDEFLKKGI-MLVVDGTDAELVRGILETDMLSMEERHKKTISFWEFWGEQGPAWGMI 161
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+I + NL S +G + V+L T G +++ LC P +++K+ + L
Sbjct: 162 GTLIGLINMLKNLEDS-STIGPNMAVALVTTFYGSLIANWLCAPFANKLKANNELELTLK 220
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ + L++ G P+V E + L +R ++
Sbjct: 221 TLIIEGLLSIQAGENPRVIEEKLKSFLSPDKREALS 256
>gi|21231339|ref|NP_637256.1| flagellar motor protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|21112998|gb|AAM41180.1| MotA protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
Length = 246
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 101/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P +IV + ++ V + + +
Sbjct: 4 LSLIGLVLAIVAIVGGSVLKGAGISSLWSPAAFLIVIVGTVAAILLHTSPAVFRRAFKIV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A +L + ++ E+ + +
Sbjct: 64 RWVIQPPA---SDGPQLLARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+
Sbjct: 104 DDAFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +
Sbjct: 163 LGLMAVMKNLAD-PSMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMA 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|46579054|ref|YP_009862.1| chemotaxis protein PomA [Desulfovibrio vulgaris str. Hildenborough]
gi|120603362|ref|YP_967762.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|46448467|gb|AAS95121.1| chemotaxis protein PomA [Desulfovibrio vulgaris str. Hildenborough]
gi|120563591|gb|ABM29335.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|311232900|gb|ADP85754.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 250
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ II GG+ + +VIV G + ++ PL+V+ S
Sbjct: 3 IATLIGIVGGFALIIIAILL-GGSLMPFVDIPSVVIVIGGTITAILVMFPLEVVLGSMGI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + ++ ++ + L ++ S E +
Sbjct: 62 AMRTFKF---NKENPVQTVEDICKLADTARRESLVALE-------------------KVP 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +RM+ G+++ ++ L+D EI+ + + +G + PA G++G
Sbjct: 100 LQDEFLKKGIRMVADGSSQD-QVTALLDAEINFMKQRHRRGQAVFKGLGSAAPAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + NLS P +G A+ V+L T G +LS + P+ +++ + + +
Sbjct: 159 LVGLVNMLQNLSD-PASIGPAMAVALLTTFYGAVLSNLMFLPMAKKLEERSFDEQFMMQL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ +++ +NG PQ+ E LP + RP
Sbjct: 218 KMEGVLSILNGEHPQLVKEKLMAFLPPNLRPK 249
>gi|320106353|ref|YP_004181943.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
gi|319924874|gb|ADV81949.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
Length = 256
Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 107/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++I GL + + I G GGN ++QP +IV G G ++ PL + S
Sbjct: 3 IASIGGLALAFIGIFVGMMMEGGNIGQIMQPTAALIVIGGTAGAVLLQFPLSIFLASIRG 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F ++ + L L +K + + + + ++
Sbjct: 63 FMGVFFHRGTDGEA---TLNQLVGFANKARKSGIVSLDADLAKVSDPFLRRAL------- 112
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
M+ V E+ +M E+D + K + G P +GI+GA
Sbjct: 113 -----------MLAVDGTEPSEVRKIMRMELDNKAEYEEKIPQVLESAGGFSPTVGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ M +L + +G I + T+ G+ L+ +C P ++K + + + +
Sbjct: 162 VLGLIQVMQHL-DNIDEVGKGIATAFVATIYGVALANLICIPAAGKLKIRQSDERMVKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + + + + G P++ R L +
Sbjct: 221 MLEGVTSILEGMNPRMVETKLRTFLFEQK 249
>gi|21242653|ref|NP_642235.1| flagellar motor protein [Xanthomonas axonopodis pv. citri str. 306]
gi|294624201|ref|ZP_06702922.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294665069|ref|ZP_06730374.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|21108122|gb|AAM36771.1| MotA protein [Xanthomonas axonopodis pv. citri str. 306]
gi|292601501|gb|EFF45517.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605150|gb|EFF48496.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 246
Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 101/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P VIV + ++ V + + L
Sbjct: 4 LSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A ++ + ++ E+ + +
Sbjct: 64 RWVIQPPA---SDRPQLVARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + N+++ E+D + L MG P +GI+GA+
Sbjct: 104 DDAFLRKGLQMLVDG-VEPEAMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMA 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|78047518|ref|YP_363693.1| flagellar motor protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78035948|emb|CAJ23639.1| flagellar motor component MotA [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 246
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 101/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + I+ I+GG G L P VIV + ++ V + + L
Sbjct: 4 LSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAFKIL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ A ++ + ++ E+ + +
Sbjct: 64 RWVIQPPA---SDRPQLVARIVEWSNIARRQGLLGLEDQL-----------------PRQ 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + ++++ E+D + L MG P +GI+GA+
Sbjct: 104 EDAFLRKGLQMLVDG-VEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M NL+ P +LG I + T T+ GI + L P+ +++KS +
Sbjct: 163 LGLMAVMKNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMA 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ LIA G P+ L
Sbjct: 222 IEGLIAIAQGENPRNIESKLAGYL 245
>gi|295706901|ref|YP_003599976.1| putative flagellar motor channel protein [Bacillus megaterium DSM
319]
gi|294804560|gb|ADF41626.1| putative flagellar motor channel protein [Bacillus megaterium DSM
319]
Length = 267
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 53/285 (18%), Positives = 114/285 (40%), Gaps = 25/285 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M T IG+ I I ++ G + GG I I+IV G G ++ PLK +K+ G
Sbjct: 6 MLTPIGILIGISMVVFGVISSGGMSGFLAFIDVPSILIVLGGVFGTLCVSFPLKQLKNMG 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F K + + +++ L ++ E ++ +S + I
Sbjct: 66 RVGKQAFQSKEINVE---EIVGTFVHLSEKARREGLLSLEAELEQIDDSFVKKGI----- 117
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ + I L++ EI + + G+ PA G++
Sbjct: 118 -------------LLAIDGVEPEMIRELLEAEIATVEERHARGRSMFEKAGDYAPAWGMI 164
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ + +L+ +P LG + ++L T G +LS P+ +++ + +
Sbjct: 165 GTLVGLVLMLKSLN-TPSSLGPDMAIALLTTFYGALLSNLFFQPIAAKLAGKTEHELFVK 223
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
++ + +I + G + ++ KV E+ +E + V +
Sbjct: 224 EVIIEGVIGLLAGQNSRF-VQAKLKVFAPVEKRKLEEKREHVREA 267
>gi|269796388|ref|YP_003315843.1| flagellar motor component [Sanguibacter keddieii DSM 10542]
gi|269098573|gb|ACZ23009.1| flagellar motor component [Sanguibacter keddieii DSM 10542]
Length = 253
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 25/277 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G+ I + I+ G +P ++ P +++V G + LK SL +
Sbjct: 1 MLGIGIALGSILAMIILEGASPMAVLLPAPMILVFGGSFAVSLAGGTLKDALGGLKSLPK 60
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
F KA + + L ++ E+ D +
Sbjct: 61 AFVGKAKTSADSIETI---VSLADRARREGLLSLEDAARDIDD----------------- 100
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ +R I G ++ L+++ I Y MG P IGIVG ++
Sbjct: 101 EFLRSGLRSAIDGT-DPEDLRTLLEDRIHSKRVSDKTSYKFFHDMGGYAPTIGIVGTVIS 159
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ + NLS +P LG I + TL GI+ + L P+ +++K + IV +
Sbjct: 160 LVHVLENLS-NPDELGHMIAAAFVATLWGILSANVLWLPIGNRLKRLSELECSQMEIVLE 218
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
L++ GA P++ E R +LPLSE+ + +E
Sbjct: 219 GLLSVQAGANPRLVGERLRSLLPLSEQ---QQSEKEA 252
>gi|328958205|ref|YP_004375591.1| flagellar motor protein MotA [Carnobacterium sp. 17-4]
gi|328674529|gb|AEB30575.1| flagellar motor protein MotA [Carnobacterium sp. 17-4]
Length = 268
Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 113/270 (41%), Gaps = 20/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I L I +I GF GG+ LI VIV G LG ++A PL+ +K+ G
Sbjct: 1 MGVFIALVIGFGSMIIGFMGEGGHVSALISWTPAVIVFGGTLGSVLLAFPLEYVKNIGKI 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F K+ ++ L +K+ E+ D ++
Sbjct: 61 IKVSFTAKS---KDLTTIIVYFSTLATKVKREGVLSIESEAAD---------------SS 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ FI +++++ G + I + ++ E+D I + G + P +GIVG
Sbjct: 103 DVDPFIKKGIQLVVDGESYEM-IRDTLELEMDAISERHKTGAAIFNSAGGTAPTMGIVGT 161
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LG++ +G L+ LG +I + TL G+ + + P+ +++K K+
Sbjct: 162 VLGLVHVLGGLADADMSQLGASISSAFLATLYGLASANLVFLPIGTRLKKIAQKEEMEKE 221
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
++ +A++ G P + E L SE
Sbjct: 222 LILEAILMIQQGVRPNLINEKLTGFLNGSE 251
>gi|311992348|gb|ADQ26747.1| MotA-1 [Aeromonas hydrophila]
Length = 251
Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 22/253 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + ++ I+GG GG+P L+ +IV G +G + P V+ +
Sbjct: 1 SLIGLVLALIAILGGNMIEGGHPSALLDLPAFLIVIGGTIGAALTQFPFSVVGSTLKRFK 60
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ L + LL L N ++ E ID+ +
Sbjct: 61 WLLAPLKLDMQQQAE---LLENLAGNARRSGMLALEGMIDEIKD---------------- 101
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ ++M++ G ++ +I +++ EI+ + + MG P +GIVGA+
Sbjct: 102 -PFLQKGVQMMVDGYEKT-KIHEVLENEIEFEQEDLEQTVKFYEAMGGYCPTMGIVGAVF 159
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I AMG L +P LG AI V+ T+ G+ + + P ++ K + +
Sbjct: 160 GLIHAMG-LLDAPDKLGGAIAVAFIATIYGVSAANLIFLPFGNRYKGFAHQIRHYKEMTL 218
Query: 243 KALIAYMNGAIPQ 255
++ ++G Q
Sbjct: 219 TGILCIVDGESQQ 231
>gi|78356760|ref|YP_388209.1| chemotaxis protein PomA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219165|gb|ABB38514.1| chemotaxis protein PomA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 251
Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 113/271 (41%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ TIIG+ I IIG G I + +V G + + P+K + S
Sbjct: 3 IGTIIGIVGAIGLIIGAIVM-GSGLGGFIDIPSVAVVVGGTIAVAFVMFPIKTVLSSIKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
++ F KA + ++ + L +K S E +DDP
Sbjct: 62 AMKCFFAKAPDP---VESIQQIISLAEKARKESLVALEKVSVDDP--------------- 103
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
++ ++++ G S + ++M+ +I I+ + +G PA G++G
Sbjct: 104 -----YLKRGVQLVADGTEESL-VRSVMEIDISIMKQRHRRGQEVFKGLGTYAPAFGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + NLS P +G A+ V+L T G +L+ P+ +++ ++
Sbjct: 158 TLVGLVQMLQNLSD-PASIGPAMAVALLTTFYGAVLANVFFLPMAKRLEERSNEEAHNME 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +NG P + E LP S+R
Sbjct: 217 LTMEGVLSILNGDHPSIVREKLESFLPPSQR 247
>gi|322435022|ref|YP_004217234.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321162749|gb|ADW68454.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 261
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 113/269 (42%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++I G+ + + I+ G GG+ + QP +IV G +G ++ P+ + +
Sbjct: 3 LASIGGIVLALAGILAGMMIEGGSIAQITQPTAAMIVLGGTIGAVMLQFPMNIFLAAMKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++++F +K + VL + +K + + ++ + ++
Sbjct: 63 IVKVFLHKGHDGEA---VLAQIVDFANKARKSGIVSLDAELAAVHDPFLKQAL------- 112
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
M+ V E+ +M E+D + K MG P +GI+GA
Sbjct: 113 -----------MLAVDGTEPSELRKIMQLELDNKSTIEEKIPAVFEAMGGYSPTVGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ M +L + +G I + T+ G+ ++ +C P ++K ++ L +
Sbjct: 162 VLGLIQVMKSL-DNIDEVGRGIATAFVATIYGVAVANLICLPAAGKLKFRHAEEVMLKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + + + + G P++ R L S+
Sbjct: 221 MLEGVCSILEGMNPRMIETKLRTFLFESK 249
>gi|94264077|ref|ZP_01287876.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93455493|gb|EAT05683.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 253
Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 110/272 (40%), Gaps = 25/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ + + + G G P I + P ++IV G ++ + +S
Sbjct: 3 LATLVGVVLGTILLSGAILL-GDAPGIFVNPPGVLIVFGGTFAATLIRFSFADVVNSIKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + +V+ + L + +K E
Sbjct: 62 VANAFTVRLSNPQ---EVIAEIVSLAHVARKNGLIVLEQQ-------------------P 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M V + IE ++ +E+D+ L MG S PA G++G
Sbjct: 100 ITDPFLKKSI-MYCVDGHEAEFIEEVLQKEVDLTLDRHRVGRKVFEGMGISAPAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + +L P +G + V++ TL G +L+ L PL ++ ++ R +
Sbjct: 159 LVGLVQMLAHLDD-PAAIGPGMAVAMLTTLYGAVLANFLFIPLADKLSLRSEEEERNRQL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + ++ + G P+V E+ LP +R S
Sbjct: 218 IIEGVLGILKGLNPRVMEEFLETFLPPKDRKS 249
>gi|326791533|ref|YP_004309354.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
gi|326542297|gb|ADZ84156.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
Length = 260
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 108/274 (39%), Gaps = 22/274 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIGL I+ ++ G + I ++IV G + ++ P+ + +
Sbjct: 3 ISTIIGLVSGIVFVLISIVLGDGRIMLFIDYPSMLIVFGGIISALFVSYPIPKFLEGLKT 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + + +V+ + L + +K E +
Sbjct: 63 GKHVFSKQEIDP---TEVISKINELALSARKEGLLALEE-----------------IAQG 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + ++IV + + ++++ EI + + E PA G++G
Sbjct: 103 MDDPFLQKGI-LLIVDGTDAELLRSILETEIAFVENRHKDNQKFWDSIAELGPAWGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL+ P LG + V+L T G +++ + P+++++ + +
Sbjct: 162 LIGLIIMLDNLND-PSTLGPKMAVALVTTFYGSMIANLVATPISNKLSLRSNDEILHKQV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + L++ G P+V E + L R +
Sbjct: 221 MVEGLLSIQAGENPRVIEEKLKAFLSPGTRKVFD 254
>gi|24216276|ref|NP_713757.1| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
gi|45656520|ref|YP_000606.1| motility protein A [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|24197542|gb|AAN50775.1| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
gi|45599755|gb|AAS69243.1| motility protein A [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 260
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T++G + +I G + G +P + ++I G G +MA P + G
Sbjct: 5 TVVGFGGACVLMIFGIISAGLSPLDIFDIPSVIITFGGATAGTIMAVPWESTLAVGKITQ 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
++F + +++K L ++ E+ + N
Sbjct: 65 KVFKTEKH---DLIELIKTLVSFSEKARREGLLALEDDV-----------------NELP 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ + +++ G + N+M+ E+ I + G PA G++G ++
Sbjct: 105 DEFLRKGITLVVDGT-DPELVRNIMETEMGNIASRHNNGKAWWENWGALAPAFGMIGTLI 163
Query: 183 GIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
G+++ + NL S P +GT + +L TL G + + P+ ++ + + I+
Sbjct: 164 GLVQMLKNLGSGDPSAIGTGMAAALITTLYGSMGANMFAIPVMKKLIRKSEDELTIKQIM 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++ +G P++ + LP SER
Sbjct: 224 IEGTLSIQSGDNPRIVKDKLSSFLPPSER 252
>gi|255021390|ref|ZP_05293438.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
gi|254969253|gb|EET26767.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
Length = 247
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 48/246 (19%), Positives = 93/246 (37%), Gaps = 22/246 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
+ GG ++Q VIV G G ++ L V S L I +
Sbjct: 21 FLEGGKIASVLQLTAFVIVIGGTTGAVMVQYTLPVFLRSVKMLPWIIKPPRSDPQP---I 77
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ + +K E I + F+ ++M++ G
Sbjct: 78 IAEIIEWSTLARKNGLLALEGLI-----------------DGITDPFLQKGLQMLVDGT- 119
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++I + ++ +++ + + G P IGI+GA+LG+I M NL+ P L
Sbjct: 120 EPHKIRDTLEVDLEARDSMERQAAKVFESAGGYAPTIGILGAVLGLIHVMENLAD-PAKL 178
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I + T+ G+ + P++++IK +Q L ++ + L+A G P++
Sbjct: 179 GAGIATAFVATIYGVGSANLFFLPVSNKIKGIVHQQSHLREMIIEGLVAIAEGENPKIIE 238
Query: 259 EYGRKV 264
+
Sbjct: 239 GRLQSF 244
>gi|238927471|ref|ZP_04659231.1| flagellar motor protein A [Selenomonas flueggei ATCC 43531]
gi|238884753|gb|EEQ48391.1| flagellar motor protein A [Selenomonas flueggei ATCC 43531]
Length = 263
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 105/273 (38%), Gaps = 21/273 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ + ++ + G G L P +I+ G + ++ + + +
Sbjct: 9 STVIGIIMGLISVFVGMILKGAPLTALNNPAAFLIIIGGTFSCLFIGFRMEQLGNFFNLI 68
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + +++ L ++ E+
Sbjct: 69 KK--TCQVPQLQEKGQLVQQFIELSQIARREGILALESK-----------------AQEI 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F + M+I G + +++D E+ I+ + + G P +G++GA+
Sbjct: 110 QDPFFRTGLGMVIDG-MDPDFVGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAV 168
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GNL+ LG +I + T+LGI Y L +P +++K + ++
Sbjct: 169 VGLIAALGNLND-IDKLGHSIAAAFVATILGIFTGYVLWHPFANKLKIISEHEVSQKRMI 227
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ +++ G P +P +ER +++
Sbjct: 228 IEGILSLQAGDSPTAIEAKLMVFIPQTEREALK 260
>gi|332799184|ref|YP_004460683.1| MotA/TolQ/ExbB proton channel [Tepidanaerobacter sp. Re1]
gi|332696919|gb|AEE91376.1| MotA/TolQ/ExbB proton channel [Tepidanaerobacter sp. Re1]
Length = 266
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 45/253 (17%), Positives = 99/253 (39%), Gaps = 22/253 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
MGG I +IV G + ++ P + +F K + DV
Sbjct: 20 IFMGGTLMAFIDIPSAMIVFGGTIAATLVNYPFSKFTSLMKIIRIVFTEKPI---DAGDV 76
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
++ + L ++ E+ F+ + ++IV
Sbjct: 77 IRTIIALAETARREGLLALEDA-----------------AYQLKDDFMQKGI-LLIVDGT 118
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++N+M+ E+ + + + MG PA G++G I+G+I + NL SP+++
Sbjct: 119 DPELVKNIMETELAFLEERHSEGQGILETMGALAPAFGLIGTIIGLINMLKNL-DSPELI 177
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G + V+L T G +++ P+ ++K ++ + ++ + +++ G P++
Sbjct: 178 GPGMSVALVTTFYGSLVANLFFIPMAGKLKVRSREEILIKEVMIEGMLSIQAGENPRIIE 237
Query: 259 EYGRKVLPLSERP 271
E + L + R
Sbjct: 238 EKLKAFLAPASRK 250
>gi|291613030|ref|YP_003523187.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583142|gb|ADE10800.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 249
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 107/268 (39%), Gaps = 22/268 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++ GL + + IIGG GG+ +L+Q +IV G +G ++ +P+KV
Sbjct: 4 LSLFGLVVAVTGIIGGQLLEGGSVNVLMQLAAFMIVFGGTIGAVMLQHPIKVFVTGIKLA 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + + + + +K E + + +
Sbjct: 64 GWVFVTPHIDEQK---LAYQITAWGSVARKDGILALEAQLKNIDD--------------- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++++ GN+ + +I ++D ++ + + P IGI+GA+
Sbjct: 106 --PFVAKGLQLLVDGNS-AEKIREILDIDLQSYETLRWQAARVWESAAGYAPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ M +L + P LG I V+ T+ G+ + + P+ ++K +Q L ++
Sbjct: 163 LGLVHVMQSLGE-PAKLGAGIAVAFIATIYGVGSANLVFLPIAGKLKIIIARQVNLREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSE 269
L N P+ + + +
Sbjct: 222 IDGLCMVANAENPRFIEGKLKGYISEDD 249
>gi|307824497|ref|ZP_07654722.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307734481|gb|EFO05333.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 251
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 115/270 (42%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +I G+F+ + I+ G GG+ + L+ ++IV G G ++ P V S
Sbjct: 3 ILSIAGIFVGVGAILLGIMLDGGDIHSLVNVPALIIVFGGTFGATLLQYPPAVFVRSMKM 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ K + D K++Y + +K E+ +
Sbjct: 63 FSWVLISKEMNLSEQID--KVIYWSLL-ARKEGLLGLEDAL-----------------PK 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E FI +++++ GN I ++++ ++D L+ MG P IGI+GA
Sbjct: 103 EEDPFIKKGLQLLVDGN-DPDAIRDILEMDMDAKESMGLQAAGVYEAMGGYAPTIGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M NL+ +P++LG I + T+ G+ + + P+ +++K+ L + +
Sbjct: 162 VMGLIHVMQNLT-NPELLGQGIATAFVATIYGVGSANLVFLPVANKLKAHVLALTQAREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +I+ G P+ L S +
Sbjct: 221 LAEGIISIAEGQNPRNIKLKLGGYLHDSYK 250
>gi|117618549|ref|YP_856320.1| chemotaxis MotA protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559956|gb|ABK36904.1| chemotaxis MotA protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 252
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 22/253 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + ++ I+GG GG+P L+ +IV G +G + P V+ +
Sbjct: 2 SLIGLVLALIAILGGNMIEGGHPSALLDLPAFLIVIGGTIGAALTQFPFSVVGSTLKRFK 61
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ L + LL L N ++ E ID+ +
Sbjct: 62 WLLAPLKLDMQQQAE---LLENLAGNARRSGMLALEGMIDEIKD---------------- 102
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ ++M++ G ++ +I +++ EI+ + + MG P +GIVGA+
Sbjct: 103 -PFLQKGVQMMVDGYEKT-KIHEVLENEIEFEQEDLEQTVKFYEAMGGYCPTMGIVGAVF 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I AMG L +P LG AI V+ T+ G+ + + P ++ K + +
Sbjct: 161 GLIHAMG-LLDAPDKLGGAIAVAFIATIYGVSAANLIFLPFGNRYKGFAHQIRHYKEMTL 219
Query: 243 KALIAYMNGAIPQ 255
++ ++G Q
Sbjct: 220 TGILCIVDGESQQ 232
>gi|330839449|ref|YP_004414029.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
gi|329747213|gb|AEC00570.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
Length = 258
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 106/269 (39%), Gaps = 21/269 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IGL ++ I GG G L P +I+ A + +K +
Sbjct: 4 STLIGLLSGLIAIFGGMILKGAPISSLNNPAAFMIIILGTFACLFTAFRMDEMKMLPKLI 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F Q ++L+L L ++ E+ ++D +
Sbjct: 64 KMTFQAPPSHQ--KGELLQLFIELSQIARREGILALESRVEDISD--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F + M+I G + + +++D EI ++ + G P +G++GA+
Sbjct: 107 --PFFKTGLSMVIDGMDPDF-VSDVLDAEISVMQERHSLGRLMLMQAGTYAPTLGVLGAV 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+ NLS ++G AI + T+LGI +Y L P +++K + ++
Sbjct: 164 IGLIAALSNLSDV-NVVGHAIAAAFVATILGIYTAYVLWLPWANKLKIMSDSEIGQKRMI 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++ G P +P SER
Sbjct: 223 VEGILSLQAGDSPTAIEAKLMVFIPQSER 251
>gi|302875900|ref|YP_003844533.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|307689334|ref|ZP_07631780.1| flagellar motor protein MotA [Clostridium cellulovorans 743B]
gi|302578757|gb|ADL52769.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
Length = 265
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 110/275 (40%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +IG+ +L ++ G G + +L+ P +I+ + + + P K
Sbjct: 3 IFLVIGVVTGLLAVVVGMIVKGADVTVLLNPAAAIIIIIGTIAAVMNSFPKKDFLRIPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F D +++K + + +K E+ + N
Sbjct: 63 ARVLFKESKT--DDPVEIIKQIIEMSQTTRKNGLLALESVVQSTENR------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G + Y I + EI+ + + G + P +G++GA
Sbjct: 108 ----FMRKGLEMVVDGIEQDY-IREVQTIEIEQMEERHRSGASIFTTAGGAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + + LG I + TL GI Y +C+P S++K ++ I
Sbjct: 163 VIGLIGALGNLNDT-EKLGHMIAAAFVATLYGIFFGYVICHPFASRLKRKSHEEISSMYI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + +++ G + + +L +R E
Sbjct: 222 ILEGILSIQAGENSKSIEKKLTGMLEPKDRAKFEE 256
>gi|225181602|ref|ZP_03735043.1| MotA/TolQ/ExbB proton channel [Dethiobacter alkaliphilus AHT 1]
gi|225167710|gb|EEG76520.1| MotA/TolQ/ExbB proton channel [Dethiobacter alkaliphilus AHT 1]
Length = 275
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 106/277 (38%), Gaps = 23/277 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
TI+G+ + + ++G GG+ + I+I G ++ L I
Sbjct: 8 LTILGIGLGLSLVMGAIAL-GGSVAMFWSLNSIMITVGGSFAALLVNFQLPQITMVYGVT 66
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F + +++ + L ++ E+ ++D +
Sbjct: 67 KNAFQQEV---QDIGELISVFVDLGQKARREGLLALEDDLNDLED--------------- 108
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + ++M+I G I ++MD EI + G PA G++G +
Sbjct: 109 --PFLGNGLQMVIDG-LEPELIRDIMDTEITATVARHRMGQDLFKTWGALAPAFGMIGTL 165
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I+ + NL P +G + V+L T G +L+ L NPL ++ + V
Sbjct: 166 IGLIQMLANLDD-PSAIGPGMAVALLTTFYGALLANLLFNPLAGKLAIRSDAEIAQKEAV 224
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+ ++A G P++ E + ++R + ++
Sbjct: 225 VEGVLAIQAGTNPRILQEKMKAFASPAQREEMARQSE 261
>gi|160939656|ref|ZP_02087004.1| hypothetical protein CLOBOL_04548 [Clostridium bolteae ATCC
BAA-613]
gi|158437447|gb|EDP15211.1| hypothetical protein CLOBOL_04548 [Clostridium bolteae ATCC
BAA-613]
Length = 294
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 109/294 (37%), Gaps = 31/294 (10%)
Query: 2 STIIGLFITILCIIGGF--------YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKV 53
+I+G + + ++ G N + + I G LG +++ P
Sbjct: 4 LSILGFILAVGLVMFGMTFDQESMRIVYH-NLKAFLDIPSMAITIGGTLGVMMISFPAGA 62
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
K G L I D + L + E+ +++ + S+
Sbjct: 63 FKKIGSHLKIIVKPYQYSPTDSVD---QIVNLATEARMKGLLSLEDKLNEIDEPFLHNSL 119
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
M++V + S ++ M+ E++ + P
Sbjct: 120 ------------------MLVVDSVDSEKVRKAMETELEQLDERHALDRRFYEKAASFAP 161
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A G++G ++G+I +GN+S L + V+L TL G +L+ +C P+ S++K+ +
Sbjct: 162 AFGMIGTLVGLILMLGNMSDV-DALAKGMAVALITTLYGSLLANVVCLPMASKLKARHDE 220
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
+ +V + ++A G P+ E K+LP S + + ++ + K
Sbjct: 221 EFLCKQLVMEGVLAIQEGENPKFIEEKLYKLLPASYKKPADKGEKQDGNNDGKK 274
>gi|319787079|ref|YP_004146554.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
gi|317465591|gb|ADV27323.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
Length = 246
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 102/265 (38%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++IGL + I+ ++GG G L VIV L + P V K +
Sbjct: 3 ILSLIGLLLAIIALVGGAILKGAGLGSLWSSAAFVIVILGTLAAIFVHTPPAVFKRALGI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
I A + ++ + ++ E +
Sbjct: 63 AGWILRPPAADRAA---LMAQILEWSNIARRQGLLGLEQQV-----------------GE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ ++M++ G +I ++M+ +++ ++L MG P +GIVGA
Sbjct: 103 QEDPFLKKGLQMLVDG-VEPEQIRHMMEIDLESQESQELAAAKVFEGMGVYAPTLGIVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I M NL+ P LG I + T T+ GI + P+ +++K+ ++ +
Sbjct: 162 VFGLIAVMKNLAD-PSKLGHGIAAAFTATIYGIASANLFFLPIANKLKAVIGRRTGEREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ + LIA G P+ L
Sbjct: 221 IIEGLIAIAQGENPRNIESRLAGFL 245
>gi|304438418|ref|ZP_07398358.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368501|gb|EFM22186.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 263
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 106/273 (38%), Gaps = 21/273 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IGL + ++ I G G L P +I+ G + ++ + + +
Sbjct: 9 STVIGLVMGVISIFVGMILKGAPLTALNNPAAFLIIIGGTFSCLFIGFRMEQLGNFTKLI 68
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + +++ L ++ E+
Sbjct: 69 KK--TCQVPQLQEKGQLVQQFIELSQIARREGILALESK-----------------AQEI 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F + M+I G + + +++D E+ I+ + + G P +G++GA+
Sbjct: 110 QDPFFRTGLGMVIDGMDPDF-VGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAV 168
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I A+GNL+ LG +I + T+LGI Y L P +++K ++ ++
Sbjct: 169 VGLIAALGNLND-IDKLGHSIAAAFVATILGIFTGYVLWMPFANKLKIMSEQEVSQKRMI 227
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ +++ G P +P +ER +++
Sbjct: 228 IEGILSLQAGDSPTAIEAKLMVFIPQTEREALK 260
>gi|292492680|ref|YP_003528119.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291581275|gb|ADE15732.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 254
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 115/271 (42%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + ++ G +G + + P I+IV G + +M L S
Sbjct: 3 LATLIGLISSFG-VVAGAILLGSSVLVFFNPPSILIVLGGTIAVVLMKFSLSQFLGSFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
++ F YKA + +++K + +K E+ I +
Sbjct: 62 AMKAFVYKAEKPE---EIIKQALEMANTARKDGLLALESWDIKN---------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + +++ G+ + ++ E+ L +G+ PA+G++G
Sbjct: 103 ----EFMKKGVTLLVDGH-EPEMVRRVLMTELRQTLERHDLGQKIFRAIGDVAPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + ++ PK +G A+ V+L TL G +++ + P ++ ++
Sbjct: 158 TLIGLVQMLSSMDD-PKKIGPAMAVALLTTLYGAMIANMVALPFADKLALRSNEERLNRF 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ +++++ G P+V E +P S+R
Sbjct: 217 IIIESILSIQQGHNPRVLEELLLTFMPGSKR 247
>gi|332669203|ref|YP_004452211.1| MotA/TolQ/ExbB proton channel [Cellulomonas fimi ATCC 484]
gi|332338241|gb|AEE44824.1| MotA/TolQ/ExbB proton channel [Cellulomonas fimi ATCC 484]
Length = 261
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 103/267 (38%), Gaps = 22/267 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+ +IGL + ++ I G G P ++ P +++V LG + + L+ K+S ++
Sbjct: 4 AGVIGLVVALVAIFGAMILEGAQPMSIMLPAPLLLVWVGTLGVGLAGHTLRDAKESFAAV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
D L L ++ E+ +
Sbjct: 64 PRALRSGIPDPTQTVDT---LVSLADRARREGLLALEDA-----------------ARSI 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++ I G ++ ++++ I + MG P IGI+G +
Sbjct: 104 DDQFLRAGLQAAIDGT-DPDDLRTILEDRIATKRARERAHAKYFQDMGGYAPTIGIIGTV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+ ++ + NLS P LG +I + TL GI+ + + PL ++IK + +
Sbjct: 163 ISLVHVLENLSD-PASLGHSIAAAFVATLWGILSANVVWLPLGTRIKRISDLECTQMEMT 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLS 268
+ L+A GA P++ E R +LP
Sbjct: 222 LEGLLAVQAGANPRLVGERLRSLLPDD 248
>gi|284041523|ref|YP_003391863.1| MotA/TolQ/ExbB proton channel [Conexibacter woesei DSM 14684]
gi|283945744|gb|ADB48488.1| MotA/TolQ/ExbB proton channel [Conexibacter woesei DSM 14684]
Length = 265
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 108/274 (39%), Gaps = 22/274 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST IGL +L I+ G +P I I+IV + + + +K
Sbjct: 4 STAIGLVGGLLAILLTGMLEGTSPATFINIPAIIIVLVGTFMATMASVGIDQMKRIPTLY 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F + D LL + ++ + + D +
Sbjct: 64 KITFSPQEQDLRARVD---LLVGIAEQARREGLLALDAQLGDIDD--------------- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F +++++ G + +++ EID ++ + G P +GI+GA+
Sbjct: 106 --EFTRKGLQLVVDGT-DPDLVREILEAEIDGMVARHAIGANTFEKAGGYAPTLGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I +GNLS P LG AI V+ TL G+ + + P+ S++K+ ++ L +
Sbjct: 163 MGLISVLGNLSD-PDSLGPAISVAFIATLYGVGGANIVFLPICSRLKALSEEEVELRTLT 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++A G P+V + +P SER + +
Sbjct: 222 LDGILAVQAGDNPRVVADKLSSYVPPSERATADD 255
>gi|91776301|ref|YP_546057.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710288|gb|ABE50216.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
Length = 246
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 104/264 (39%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S++ G+ + + I+ G GG LIQP +IV +G ++ L
Sbjct: 4 SSLGGILLALAGILIGQALEGGKFSSLIQPAAFMIVLFGTIGAVLLQTRPVFFIQGIRLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ QD + + + +K ENH+ +E
Sbjct: 64 QWVVFPP---QDDREKLARRITSWSQIARKDGILLLENHM-----------------YSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +R++I G +I ++ + +I+ + G P IGI+GA+
Sbjct: 104 QDPFVKTALRLVIDGT-PPEKIRDICNVDINRYEAAQRNAVKIWEAAGGYAPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NLS P LG+ I ++ T+ G+ + L P+ +++K+ Q +V
Sbjct: 163 LGLIHVMENLSD-PGKLGSGIAIAFVATIYGVGFANLLFLPIANKLKALVQLQTTRREMV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ ++ NG ++ E L
Sbjct: 222 VEGVVGIANGENHKIIEERLNAYL 245
>gi|288942613|ref|YP_003444853.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288897985|gb|ADC63821.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 247
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 99/255 (38%), Gaps = 22/255 (8%)
Query: 12 LCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
+ I+GG A G + L +IV LG ++ + V + +F L
Sbjct: 14 VAILGGVVAKGSSVAALWNLAAFLIVVIGTLGATLVQTRVPVFLHAFRMFPWVFKPPRLE 73
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
++K + +K E+ N E F+ ++
Sbjct: 74 SRG---MIKRIVEWSQISRKEGLLGLEDR-----------------SNKEPDPFVRKGLQ 113
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+++ G A + +++ ++D L+ MG P +GI+GA++G++ M NL
Sbjct: 114 LLVDG-AEPQTLRQILESDLDNSESFDLQGARVFESMGVYSPTLGIIGAVMGLMAVMQNL 172
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
++ P LG I + T+ G+ L+ P+++++KS + ++ + LIA G
Sbjct: 173 TE-PSKLGQGIAAAFVATIYGVGLANLFFLPVSNKLKSIVQARVNHQTMLLEGLIAIAEG 231
Query: 252 AIPQVAIEYGRKVLP 266
P+ +
Sbjct: 232 ENPRNIENKLNGFIQ 246
>gi|114565808|ref|YP_752962.1| hypothetical protein Swol_0239 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114336743|gb|ABI67591.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 263
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 47/260 (18%), Positives = 102/260 (39%), Gaps = 22/260 (8%)
Query: 23 GNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLL 82
+ L +IV G +G +++ ++ +K L +F K + Y V++ L
Sbjct: 25 AHLSSLWGHTAFIIVFGGTIGATIVSYTMEELKKVPFFLKVVFSEKKI---DYFTVMETL 81
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
++ E+ + + N F+ ++++I G
Sbjct: 82 VETADKARREGLLSLESQLGEIDN-----------------EFLSRGLQLVIDGT-DPEL 123
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
++++ EI+ + G P +GI+G ++G+I + N+++ P L AI
Sbjct: 124 TRSMLEMEIEAHEKSQKVGVDIFMTAGGFAPTMGIIGTVMGLIHVLSNIAE-PDKLAGAI 182
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+ TL G+ + + P ++IK ++ L +V + +++ G P+V E
Sbjct: 183 AVAFLATLYGVASANVMWIPFGTKIKVKSGREILLMELVLEGILSIQAGENPRVIREKLM 242
Query: 263 KVLPLSERPSIEIVAQEVLQ 282
LP R + ++
Sbjct: 243 TFLPADAREKGAEQERARME 262
>gi|328958274|ref|YP_004375660.1| flagellar motor protein MotP [Carnobacterium sp. 17-4]
gi|328674598|gb|AEB30644.1| flagellar motor protein MotP [Carnobacterium sp. 17-4]
Length = 269
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 98/268 (36%), Gaps = 22/268 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GN + +VI G +++ PLK IK L ++ Y +
Sbjct: 22 ITSSGNIASFVDAPSLVITLGGSFSAILISFPLKSIKKLPSILKKLVLDPNP---DYAKL 78
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
++ L + E I + N + ++M++ G
Sbjct: 79 IETFASLSRKARSQGILAIEEDIVEQDN-----------------ELMVTGLQMVVDG-L 120
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+ ++M+ + I GE PA G++G ++G++ +G L+ P +
Sbjct: 121 EPETVRDIMEITSENIEKRHSVGQDIFLKWGEMAPAFGMIGTLIGLVIMLGELND-PSTI 179
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G + +L T G L+ + P+ S ++ ++ + ++ + +++ G P+V
Sbjct: 180 GVGMATALITTFYGSFLANLIFIPIASNLQMQTNEEMKFCEMIIEGVLSLQAGENPRVIE 239
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+ + +P + A+ + Q N
Sbjct: 240 QKLKSYMPFESKEDATKAAENLQQEEQN 267
>gi|306820124|ref|ZP_07453772.1| chemotaxis protein MotA [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551902|gb|EFM39845.1| chemotaxis protein MotA [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 258
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 100/272 (36%), Gaps = 22/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + G + G I I + ++A P+ IKD
Sbjct: 3 LATVIGLVGAFAAMGLGIISGGAGFATYIDIPSFFITVLGAIFASMIAFPMSTIKDLPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F +A + L L +K E D
Sbjct: 63 IGKTFKSEATDPSKTIES---LIELANKARKDGLLSLEEAARD----------------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M+IV + NL++ E+D I + + P G++G
Sbjct: 103 MGDPFLQKGL-MLIVDGTDPELVRNLLETELDFIEQRHKNGQGLMEMIASMGPGFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G++ + NLS + LG + V+L TL G IL+ P+ ++ + I
Sbjct: 162 LFGLVAMLKNLSDTAS-LGPNMAVALITTLYGSILANVFFTPMAKKLSVNSAVEMLERGI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + L++ G P++ E + LP S R +
Sbjct: 221 ILEGLLSIQAGENPRIIEEKLKAFLPPSLRKA 252
>gi|95929858|ref|ZP_01312599.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134154|gb|EAT15812.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 255
Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 110/275 (40%), Gaps = 29/275 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG +I GG+ + + P I+IVAG LG ++ P K + +
Sbjct: 3 ISTIIGAVAAFGLMIAAM-MNGGSILLFVDPASIMIVAGGTLGSTLIHYPFKEVFRAVSV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN---HIDDPYNSTIFTSIPTVL 117
+ +K +++ L +K ++ ++DP
Sbjct: 62 AKKTLFHK---DQAPGEIISQLIEYAGKARKEGILSLQSVMSQVEDP------------- 105
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F ++M + G + ++M+ E++ + + M PA+G+
Sbjct: 106 -------FFLKGLQMAVDGQ-EPEALRDMMERELEYVQERHETGADIFTTMAAYAPAMGM 157
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+++ + + P +G A+ V+L T G + + + P++ ++K +
Sbjct: 158 IGTLIGLVQMLQTMDD-PSSIGPAMAVALLTTFYGAVAANVIFTPMSGKLKHRSSSEMLC 216
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ + + + + G P+V + + + R S
Sbjct: 217 KTLISEGMNSILAGENPRVMEQRLHAFVAPNLRES 251
>gi|257866374|ref|ZP_05646027.1| flagellar motor protein MotA [Enterococcus casseliflavus EC30]
gi|257873110|ref|ZP_05652763.1| flagellar motor protein MotA [Enterococcus casseliflavus EC10]
gi|257875986|ref|ZP_05655639.1| flagellar motor protein MotA [Enterococcus casseliflavus EC20]
gi|257800332|gb|EEV29360.1| flagellar motor protein MotA [Enterococcus casseliflavus EC30]
gi|257807274|gb|EEV36096.1| flagellar motor protein MotA [Enterococcus casseliflavus EC10]
gi|257810152|gb|EEV38972.1| flagellar motor protein MotA [Enterococcus casseliflavus EC20]
Length = 264
Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 101/258 (39%), Gaps = 22/258 (8%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
++ G G N +LI P +I+ + + + P IK + K
Sbjct: 25 SVVVGMIVKGANVAVLINPAAAIIIFVGVIAAVINSFPSSDIKKIPKIFGVLLKNKEYDL 84
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
T + + L ++ E I + + F+ + M
Sbjct: 85 KT---TINTIVELANQARRDGLLSLEGAIQNLED-----------------PFLKKGLEM 124
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G + +I+ +M+ EI I G S P +G++GA++G+I A+GNL
Sbjct: 125 VVDG-IAAEQIQEIMENEIYGIEERHRIGSAIFKTAGTSSPTLGVLGAVIGLIGALGNL- 182
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ + LG I + TL GI Y L P +S++ ++ ++ I+ + ++A G
Sbjct: 183 EDVEALGHMISAAFVATLYGIFFGYVLFIPFSSRLTLKSEQEVQMMSIIVEGVLAIQAGQ 242
Query: 253 IPQVAIEYGRKVLPLSER 270
P+ + ++ +R
Sbjct: 243 SPKSIEKKLYSLIDPKKR 260
>gi|89094433|ref|ZP_01167373.1| flagellar motor protein [Oceanospirillum sp. MED92]
gi|89081325|gb|EAR60557.1| flagellar motor protein [Oceanospirillum sp. MED92]
Length = 246
Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 108/265 (40%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ G+ + ++GG Y GG+ L+ IV L ++ +P + ++ +
Sbjct: 3 LTAFFGVLLAFAAVLGGNYLEGGHVEELLNLPAAAIVILGTLAAAIIQSPAQDVRRAVRL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L FG QD + +++ + ++ E +
Sbjct: 63 LGWAFGRN--NQDFKGSIDRIVQWCVV-ARRKGLLALEKEAE-----------------K 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + +++ G + I ++ E+ L+ I MG P +GI+GA
Sbjct: 103 ESDPFVKAGLLLLVDGKG-ADVIRGTLEVELITAEQRDLQGAKVIESMGGYAPTLGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I M NLS P LG I + T+ GI L+ P+ ++IK+ L +++ +
Sbjct: 162 VLGLIHVMSNLSD-PDSLGAGIATAFVATIYGIGLANLFLIPVANKIKNLVLVRYQYQEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
V + L+ G P+ + + L
Sbjct: 221 VLEGLMFIAEGQNPKAIQQRLQGYL 245
>gi|225569969|ref|ZP_03778994.1| hypothetical protein CLOHYLEM_06064 [Clostridium hylemonae DSM
15053]
gi|225161439|gb|EEG74058.1| hypothetical protein CLOHYLEM_06064 [Clostridium hylemonae DSM
15053]
Length = 274
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 107/276 (38%), Gaps = 25/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ I+ GG I I+IV G L + + P ++K+ G
Sbjct: 3 ITTLLGVVGGFAFIVNA-IMQGGKIGSFIDVASIMIVVGGTLCAVIASFPFNMLKNVGKH 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ K + D+L L + E N +DDP
Sbjct: 62 FTKLLSNKKFQVEPVIDMLVEFAQLARKNGLLALEEKANQLDDP---------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + M++V + ++ +++ E+D + + PA G++G
Sbjct: 106 ----FFKQGI-MLVVDAMEADKVREMLETEVDSMSQRHEEEIAIYEKAAGYAPAFGMIGT 160
Query: 181 ILGIIKAMGNLS---QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
++G+I + ++ S LG ++ +L T G I++ + P+ +++ ++
Sbjct: 161 LVGLINMLKSMDLSQGSSSTLGESMATALVTTFYGCIMANLMFMPIAKKLRIRNEEEILY 220
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
I+ + +I +G P+ E +L ++ I
Sbjct: 221 KQIIIEGVIGIQSGENPKNLKEKLVSLLHQQKQAKI 256
>gi|257871285|ref|ZP_05650938.1| flagellar motor protein MotA [Enterococcus gallinarum EG2]
gi|257805449|gb|EEV34271.1| flagellar motor protein MotA [Enterococcus gallinarum EG2]
Length = 254
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 101/258 (39%), Gaps = 22/258 (8%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
++ G G N +LI P +I+ + + + P IK + K
Sbjct: 15 SVVVGMIVKGANVAVLINPAAAIIIFVGVIAAVINSFPSSDIKKIPKIFGVLLKNKEYDL 74
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
T + + L ++ E I + + F+ + M
Sbjct: 75 KT---TINTIVELANQARRDGLLSLEGAIQNLED-----------------PFLRKGLEM 114
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G + +I+ +M+ EI I G S P +G++GA++G+I A+GNL
Sbjct: 115 VVDG-IAAEQIQEIMENEIYGIEERHRIGSSIFKTAGTSSPTLGVLGAVIGLIGALGNL- 172
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ + LG I + TL GI Y L P +S++ ++ ++ I+ + ++A G
Sbjct: 173 EDVEALGHMISAAFVATLYGIFFGYVLFIPFSSRLSLKSEQEVQMMSIIVEGVLAIQAGQ 232
Query: 253 IPQVAIEYGRKVLPLSER 270
P+ + ++ +R
Sbjct: 233 SPKSIEKKLYSLIDPKKR 250
>gi|187932462|ref|YP_001885052.1| chemotaxis protein MotA [Clostridium botulinum B str. Eklund 17B]
gi|187720615|gb|ACD21836.1| chemotaxis protein MotA [Clostridium botulinum B str. Eklund 17B]
Length = 271
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 111/273 (40%), Gaps = 25/273 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG---NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+ T GL + + +I G + G N + I I G + ++ PL IK +
Sbjct: 6 IMTAAGLIMGLGLMIYGMASGGSGASNLKLFWDVSSIAITFGGSIAAVMIVYPLDEIKKA 65
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
G+ L+ F + + + + L ++ E+ I + L
Sbjct: 66 GILFLQSFKEP---KSSTMETISQFTELSRKARRDGLLSLEDTI-------------SQL 109
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
E+ F+ ++M++ G I+ +++ +I + S G P G+
Sbjct: 110 EDK----FLKKGLQMVVDG-IEPESIKEILELDISEMEVRHKSGSGIFSAWGAFAPGFGM 164
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I+ + NL+ S + + +G +L T G +++ +P+ + + K+ +
Sbjct: 165 LGTLIGLIQMLANLTDS-STIASGMGKALITTFYGSLIANIFASPIAQNLNNKSQKEVAI 223
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ + +++ +G P++ + L ER
Sbjct: 224 KEMMLEGILSIQSGVNPRIVEDKLISYLSPQER 256
>gi|206895930|ref|YP_002246693.1| chemotaxis protein PomA [Coprothermobacter proteolyticus DSM 5265]
gi|206738547|gb|ACI17625.1| chemotaxis protein PomA [Coprothermobacter proteolyticus DSM 5265]
Length = 265
Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 110/274 (40%), Gaps = 25/274 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ + GL IT I+ A + I +++ G G ++A +K+
Sbjct: 3 IGVLGGLAITFGLIVLSVIA---DLNSFIDFNSMLVTIGGSFGSTLVAVGFDRMKNLPKY 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F K + +KLL L ++ E+ +++ +
Sbjct: 60 VMAAFKKKTFDKAG---TIKLLVDLSNKARREGLLALEDSLEELED-------------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++++I G ++N+++ +I+ + P+ G++G
Sbjct: 103 ---PFVKRGLQLVIDG-VEPESVQNILNLDIEAMQNRHADGKMIFDVWAGFAPSFGMLGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
I+G+++ + L P +G A+ ++L T G +L+Y + P+++ ++ + +
Sbjct: 159 IMGLVQMLKRLDD-PSTIGPAMALALITTFYGAVLAYGVFQPMSNTLQRKSDMESDFREM 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + ++ +G P++ E L +ER E
Sbjct: 218 IVEGILGIQSGENPRLLEERLVSFLSPAEREQYE 251
>gi|295111384|emb|CBL28134.1| Flagellar motor component [Synergistetes bacterium SGP1]
Length = 239
Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 104/261 (39%), Gaps = 22/261 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
A GGN I ++I G +G +++NP +K G L F +
Sbjct: 1 MAGGGNFGAYIDVPSMMITIGGAVGATILSNPSDRLKAIGGGLKSAFVSHEPN---LVGM 57
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
++++ ++ E+ + + N F+ +++++ G
Sbjct: 58 VQMIVSFAEKTRREGLLALESDVAELDN-----------------EFLKKSIQLVVDGT- 99
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+ ++D EI ++ + E P+ G++G ++G+I +GNL+ L
Sbjct: 100 DPELVRAILDTEIGVLEDRHSANKSVFDTLAEFAPSYGMIGTLVGLIAMLGNLADV-SSL 158
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G + V+L T+ G +++ P+ ++ + ++ ++ + ++A G P++
Sbjct: 159 GPNMAVALITTMYGSMMANMFGIPIGKKLAARSAQEVVAMELMVEGILAIQAGENPRIVE 218
Query: 259 EYGRKVLPLSERPSIEIVAQE 279
E + LP R S + E
Sbjct: 219 EKLKVYLPPRLRSSFDKKEGE 239
>gi|297569176|ref|YP_003690520.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
gi|296925091|gb|ADH85901.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
Length = 254
Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 112/271 (41%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + + ++G G P I P ++IV G L ++ + + +S
Sbjct: 3 LATLIGVILGSVLLMGAILL-GDAPGIFFNPPSVLIVFGGTLATAMIRFSMADVINSARI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + +V+ + L + +K E
Sbjct: 62 AMNAFTMRVNNPQ---EVIAEIVNLAHVARKNGLIVLEQQ-------------------P 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M V + IE ++ +E+++ L + MG S PA G++G
Sbjct: 100 ITDPFLKKAI-MYCVDGHEAEFIEEVLQKEVELTQARHLVGNQVFNGMGTSAPAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + ++ P +G + V+L TL G +L+ L P+ ++ ++ + +
Sbjct: 159 LVGLVQML-SVMDDPAAIGPGMAVALLTTLYGAVLANFLFIPIADKLALRSQEEEQNRQL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ + ++ + G P+V E+ LP +R
Sbjct: 218 IIEGVLGILKGLNPRVMEEFLETFLPPKDRK 248
>gi|325290745|ref|YP_004266926.1| MotA/TolQ/ExbB proton channel [Syntrophobotulus glycolicus DSM
8271]
gi|324966146|gb|ADY56925.1| MotA/TolQ/ExbB proton channel [Syntrophobotulus glycolicus DSM
8271]
Length = 259
Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 93/248 (37%), Gaps = 22/248 (8%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
F GG L+ +IV G LG + PL+ +K F ++ G +
Sbjct: 20 FIHEGGTLGSLLSVSAFMIVFGGTLGATCIGIPLEELKKLPKWFQIAFTNQSFGTEK--- 76
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
L ++ E ++ + F M++II G
Sbjct: 77 AYHTLVHFAEKARQEGLLSLEQELETVDDK-----------------FTKQGMQLIIDGT 119
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
++++ I ++ G P +GI+G ++G+I+ +GNL+ P
Sbjct: 120 -DPEITRSILESNISVLENRHKVGTSFFEAAGGFAPTMGIIGTVMGLIQVLGNLTD-PDS 177
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
L +I + T TL G+ + + P+ +++KS + ++ +I+ +G P +
Sbjct: 178 LSASIAAAFTATLYGVASANIMFLPIANKLKSKNKSEVETMEMIMDGIISIQSGENPAIL 237
Query: 258 IEYGRKVL 265
E + L
Sbjct: 238 KEKLKTHL 245
>gi|325567536|ref|ZP_08144203.1| chemotaxis protein MotA [Enterococcus casseliflavus ATCC 12755]
gi|325158969|gb|EGC71115.1| chemotaxis protein MotA [Enterococcus casseliflavus ATCC 12755]
Length = 254
Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 101/258 (39%), Gaps = 22/258 (8%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
++ G G N +LI P +I+ + + + P IK + K
Sbjct: 15 SVVVGMIVKGANVAVLINPAAAIIIFVGVIAAVINSFPSSDIKKIPKIFGVLLKNKEYDL 74
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
T + + L ++ E I + + F+ + M
Sbjct: 75 KT---TINTIVELANQARRDGLLSLEGAIQNLED-----------------PFLKKGLEM 114
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G + +I+ +M+ EI I G S P +G++GA++G+I A+GNL
Sbjct: 115 VVDG-IAAEQIQEIMENEIYGIEERHRIGSAIFKTAGTSSPTLGVLGAVIGLIGALGNL- 172
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ + LG I + TL GI Y L P +S++ ++ ++ I+ + ++A G
Sbjct: 173 EDVEALGHMISAAFVATLYGIFFGYVLFIPFSSRLTLKSEQEVQMMSIIVEGVLAIQAGQ 232
Query: 253 IPQVAIEYGRKVLPLSER 270
P+ + ++ +R
Sbjct: 233 SPKSIEKKLYSLIDPKKR 250
>gi|217077697|ref|YP_002335415.1| motility protein A [Thermosipho africanus TCF52B]
gi|217037552|gb|ACJ76074.1| motility protein A [Thermosipho africanus TCF52B]
Length = 262
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 120/280 (42%), Gaps = 22/280 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ I G+ I ++ G + GG+ I IVIV G +G + ANP +
Sbjct: 3 IALIGGIGIAFAMVVFGIVSGGGDFAAFINIPSIVIVIGGSIGAAIAANPKDIGFKIVQI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LE + Y ++LK L L ++ E +I+ +
Sbjct: 63 ALEALREP---KTDYVNLLKTLVSLSEKARREGLLSLEENIEQLDD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G ++++++ E+++ E +G PA G++G
Sbjct: 106 ---PFMKKGLQLLVDGT-EPEVLKSMLEIEVEVASNEMNLKKGLFEAIGAYAPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + +L+ P LG ++ V+L TL G I++ ++ P+ +I + +
Sbjct: 162 LIGLIQMLKSLND-PNSLGPSMAVALITTLYGSIMANAMALPIAEKIAKRVISFEMEKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ + +++ G P++ E + LP + + E QE
Sbjct: 221 ILEGILSIQAGENPRILEEKLKSFLPDAVKAQYEAATQEA 260
>gi|240145495|ref|ZP_04744096.1| chemotaxis protein PomA [Roseburia intestinalis L1-82]
gi|257202310|gb|EEV00595.1| chemotaxis protein PomA [Roseburia intestinalis L1-82]
Length = 267
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 108/279 (38%), Gaps = 24/279 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
+++I+G+ + ++ + G + GG + + + +I G + G + + L +
Sbjct: 6 IASIVGMLLGVVMFVFGVLSNGGVASLHSMWDTASFIITIGGSIAGTLASFKLADFINGV 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
S+ IF + V+ + L +K E
Sbjct: 66 KSIKLIFKDEVQDPAV---VINQIISLSNTARKEGLLALEEA-----------------A 105
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N F+ + M++V + +M+ ++ + E PA G++
Sbjct: 106 NGIEDDFLKKGI-MLVVDGTDPELVRGIMETDLACVESRHKAKIAVWEKWAELGPAWGMI 164
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+I + N+ + +G A+ +L TL G +L+ LCNP+ ++K + +
Sbjct: 165 GTLIGLILMLKNM-EDASTIGPAMATALVTTLYGSLLANWLCNPIAGKLKLNNDNEMMMK 223
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
I + +++ G P+V E + L S R + +
Sbjct: 224 EISVEGILSIQAGENPRVIEEKLKSFLAPSARNTAQESE 262
>gi|260438797|ref|ZP_05792613.1| chemotaxis protein PomA [Butyrivibrio crossotus DSM 2876]
gi|292808786|gb|EFF67991.1| chemotaxis protein PomA [Butyrivibrio crossotus DSM 2876]
Length = 269
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 105/276 (38%), Gaps = 25/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
++T+IGL I +I G L + I+I G G ++++ +K
Sbjct: 3 LATLIGLIACIALVIMGIITGDDGVAALKNFVDFKSILITFGGAFGATLISHKMKDFIGG 62
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+ Q + +K + L +K E ++
Sbjct: 63 LKGFALALKQRNYDQ---TEAIKNIIELSNVARKEGLLALEEAAENIEE----------- 108
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
F+ + ++IV + +++ EI + K + PA G+
Sbjct: 109 ------PFMKKGI-LLIVDGTEPDLVRAILETEITCVEQRHKKVAGFWDTLAAMGPAWGM 161
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
VG ++G+I + N+S LG + V+L TL G +L+ + P+ ++++ + L
Sbjct: 162 VGTLIGLINMLKNMSD-ASALGPNMAVALITTLYGSMLANWIAMPIANKLRVNNSDEIIL 220
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
++ + L++ G P+V E + L ++R S
Sbjct: 221 KEVMIEGLLSIQAGENPRVIEEKLKSFLSPNDRNSY 256
>gi|310644266|ref|YP_003949025.1| mota/tolq/exbb proton channel [Paenibacillus polymyxa SC2]
gi|309249217|gb|ADO58784.1| MotA/TolQ/ExbB proton channel [Paenibacillus polymyxa SC2]
Length = 275
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 47/252 (18%), Positives = 104/252 (41%), Gaps = 22/252 (8%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
F GG L+Q +IV G V++ P +K +L F + + Y +
Sbjct: 20 FLWEGGEFSGLLQGTSALIVFGGTFAAVVISYPASKLKTIPTALRMAFSREDNPTEQYIE 79
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
L + ++ E + + F+ + ++++I G
Sbjct: 80 ---DLVSMAATSRRSGVLALER-----------------ISSEHPNAFLREGLQLVIDGT 119
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+I+ +++ E+D I ++ G P +GI+G ++G+I +G+L++ P
Sbjct: 120 -EQEQIKQILELELDAIEHKHEGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSLTE-PTA 177
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
LG +I V+ TL G+ + + P+ S+I++ + ++ + ++A NG P++
Sbjct: 178 LGPSIAVAFIATLYGVASANLIFLPIASKIRAASESEIITMDLLLQGILAIQNGENPKLV 237
Query: 258 IEYGRKVLPLSE 269
+ + +
Sbjct: 238 RKKLEFFIRSEQ 249
>gi|188576037|ref|YP_001912966.1| flagellar motor protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520489|gb|ACD58434.1| MotA protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 237
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 96/257 (37%), Gaps = 22/257 (8%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ I+ I+GG G L P +IV + ++ V + + L +
Sbjct: 2 LAIVAIVGGSVLKGAGISSLWSPAAFLIVIVGTVAAILLHTSPAVFRRAFKILRWVIRPP 61
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+L + ++ E+ + + F+
Sbjct: 62 T---SDRPQLLARIVEWSNIARRQGLLGLEDQL-----------------PRQNDAFLRK 101
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
++M++ G + N+++ E+D + L MG P +GI+GA+LG++ M
Sbjct: 102 GLQMLVDG-VEPESMRNMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLGLMAVM 160
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
NL+ P +LG I + T T+ GI + L P+ +++KS +V + LIA
Sbjct: 161 KNLAD-PAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMVIEGLIAI 219
Query: 249 MNGAIPQVAIEYGRKVL 265
G P+ L
Sbjct: 220 AQGENPRNIESKLAGYL 236
>gi|163942244|ref|YP_001647128.1| flagellar motor protein MotA [Bacillus weihenstephanensis KBAB4]
gi|163864441|gb|ABY45500.1| MotA/TolQ/ExbB proton channel [Bacillus weihenstephanensis KBAB4]
Length = 264
Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 116/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG+ + +L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATIIGIILGVLAVVVGMVVKGADITALLNPAAALIIFVGTFAAVCIAFPMNQLKKVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D+ +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDEIED--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAELEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|302392385|ref|YP_003828205.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
gi|302204462|gb|ADL13140.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
Length = 271
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 112/270 (41%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ GL + L I G GG+P I I ++V G L ++ K I+D
Sbjct: 5 LATMGGLIVGALLIAGAIVL-GGSPIIFISGTSFLMVVGGTLAAATVSYSFKHIQDLIGI 63
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + +++ +L ++ E+ N
Sbjct: 64 LKVAFYEQQTNPQ---EIISVLVSFAEKARREGLLALEDE-----------------ANQ 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G S + ++++ E+ + MGE PA G++G
Sbjct: 104 LDDDFLQKGIQLVVDGT-DSELVRSILETELAFLEERHATSRGIFETMGELSPAFGMMGT 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + L ++P+ +G + +L T G +++ + PL +++ ++ + +
Sbjct: 163 LVGLIQMLSKL-ENPENVGGGLATALITTFYGTVMANLVFIPLAKKLRMKSEEEILVKEV 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ G P++ E + L + R
Sbjct: 222 MIEGILSIQAGENPRIVEEKLKAFLSGAGR 251
>gi|297583573|ref|YP_003699353.1| MotA/TolQ/ExbB proton channel [Bacillus selenitireducens MLS10]
gi|297142030|gb|ADH98787.1| MotA/TolQ/ExbB proton channel [Bacillus selenitireducens MLS10]
Length = 270
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 112/273 (41%), Gaps = 25/273 (9%)
Query: 1 MSTIIGLFITILCIIGGFY---AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+ T +G+F+ + ++ Y A G+ +Q +++V G +G + + +K
Sbjct: 6 LLTPVGIFLGLTAVLMAIYVNEAGDGSILDFVQVASLLVVFGGLIGALTVNFSIGDLKLL 65
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
E F K + +++ L ++ E ++D +
Sbjct: 66 PRVFKETFQTKE---NDLEELIDTFVDLSTRARREGLLALEAGLEDVDD----------- 111
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI + ++ V I+++M E+ + K + GE PA G+
Sbjct: 112 ------PFIQKGV-LLAVDGIEPDIIKDIMMAEVVAMEERHRKGRSIVEKAGEYAPAWGM 164
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G++ + NL+ P LG + ++L TL G +++ + P+ ++++ + ++
Sbjct: 165 IGTLVGLVLMLQNLND-PSTLGPNMAIALLTTLYGTLMANLVFLPMANKLELSTEEEVFR 223
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+V + +I +G P++ E LP +
Sbjct: 224 KQVVVEGVIGVQSGQNPKILQEKLSAFLPNHVK 256
>gi|167629588|ref|YP_001680087.1| flagellar motor component mota, putative [Heliobacterium
modesticaldum Ice1]
gi|167592328|gb|ABZ84076.1| flagellar motor component mota, putative [Heliobacterium
modesticaldum Ice1]
Length = 260
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 21/257 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
A G N +L+ P I+I+ + + P+K IK IF + L + +
Sbjct: 21 IAKGANIAVLVNPAAIIIIFVGTFAALLNSFPMKEIKKLPTLFGIIFKEQKLTEPKV--I 78
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
++ + + ++ E ID F+ + +R+I+ G
Sbjct: 79 IQQMTDMAQQARREGLLSLEASIDKLEE-----------------PFLRNGIRLIVDGQG 121
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+ + L++ EI + + G P +G++GA++G+I A+GNL+ L
Sbjct: 122 EEF-VRELLEAEIAAMEERHRVGAQIFTSAGSYAPTLGVLGAVIGLIGALGNLNDV-NKL 179
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
GT I + TL GI Y L +P +++K ++ +L ++ + +++ G+ P
Sbjct: 180 GTMIAAAFVATLFGIFTGYVLWHPFATKLKRKSAEEVKLKTMMLEGILSIQVGSSPIQIR 239
Query: 259 EYGRKVLPLSERPSIEI 275
E L +ER ++E
Sbjct: 240 EKMMIHLTQAERAALEK 256
>gi|218778867|ref|YP_002430185.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218760251|gb|ACL02717.1| Chemotaxis protein MotA [Desulfatibacillum alkenivorans AK-01]
Length = 253
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 117/271 (43%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
++TI+G+ + + ++ G I ++IV G +G ++ PLK I GV
Sbjct: 3 IATILGVVGSFVLVVLAIGPSG--LGAFINVPSLIIVVGGTMGATMINYPLKEILGIVGV 60
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
++ +F +A + D + ++ E I + +
Sbjct: 61 AMKTVFAKEASAK----DTIAKFMDFAQKARREGILSLEGDIKELED------------- 103
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +++ I G I +M+ EI+ + + +G PA+G+VG
Sbjct: 104 ----EFMKKGIQLAIDG-LEPNAIREIMETEINYTMNRHKLGADLFTTIGTFAPALGMVG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + ++ + P +G A+ V+L T G IL+ +C P+ ++K ++ +
Sbjct: 159 TLIGLVQMLQSM-EDPSSIGPAMAVALLTTFYGAILANIICMPVAGKLKMRSSQEMEVRE 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+V + +++ +G P++ + LP +R
Sbjct: 218 LVVEGVLSLSSGENPRIVEQKLACFLPPKQR 248
>gi|283782102|ref|YP_003372857.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283440555|gb|ADB18997.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 259
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 112/277 (40%), Gaps = 22/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL I + GG+ +++V G LG ++ P+KVI
Sbjct: 3 IATILGLIIAFAMMGASVIMGGGSFASFWDTASVLMVFGGSLGTVMVCFPMKVILKLPKV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ K ++ + L ++ E I + + I I
Sbjct: 63 MIKSALNKPPDVSA---LISQIVSLAETARRDGLLALEARIGEIQHPLIKLGIQ------ 113
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ V +R IE +M E++ + + + +G PA+G++G
Sbjct: 114 ------------MSVDGSRPEAIEEVMRTEVESLSLRHKEGKGMLDQIGRFAPAMGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I +GN+S P +G + V+L TL G ++S P+ ++ ++ I
Sbjct: 162 LLGLIIMLGNMSD-PSAIGGGMAVALITTLYGAVISNGSILPMAEKLAYVTKQEIIASEI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ + ++A +G P++ + LP + R + E
Sbjct: 221 IIRGIMALQSGENPRLIEQKLNTFLPPAVRKAKEAKE 257
>gi|291280095|ref|YP_003496930.1| flagellar motor protein MotA [Deferribacter desulfuricans SSM1]
gi|290754797|dbj|BAI81174.1| flagellar motor protein MotA [Deferribacter desulfuricans SSM1]
Length = 254
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 111/272 (40%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ I + MG + I ++IV G G M P+ + +
Sbjct: 3 IATLLGIVIAYALVFVS-LLMGPGVGVYIDIPSVLIVIGGTFGIIFMNYPMNKVFNIIAI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F +K+ + +++ L ++ E+ E
Sbjct: 62 VMKTFLFKS---EDPSKLIEQLVNFAVRARRDGILALESA-----------------EGE 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +R+ + G I+++++ E+ + + + + PA+G++G
Sbjct: 102 ISDEFLKKGIRLAVDGT-EPEVIKSILETELSYMEERHKEGVGILESIASFAPAMGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + +S P +G A+ V+L T G I++ PL ++K+ ++ L I
Sbjct: 161 LIGLVAMLQTMSD-PSSIGPAMAVALLTTFYGAIIANLFAAPLAGKLKTRSAEEILLREI 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ ++A G P++ + LP R S
Sbjct: 220 MIAGIMAIQAGDNPRIVEQKLNAYLPPKMRKS 251
>gi|229062195|ref|ZP_04199518.1| hypothetical protein bcere0026_42660 [Bacillus cereus AH603]
gi|228717089|gb|EEL68767.1| hypothetical protein bcere0026_42660 [Bacillus cereus AH603]
Length = 266
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG+ + +L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGIILGVLAVVVGMVVKGADITALLNPAAALIIFVGTFAAVCIAFPMNQLKKVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D+ +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDEIED--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IDKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAELEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|229135344|ref|ZP_04264135.1| hypothetical protein bcere0014_42410 [Bacillus cereus BDRD-ST196]
gi|229169238|ref|ZP_04296951.1| hypothetical protein bcere0007_41890 [Bacillus cereus AH621]
gi|228614221|gb|EEK71333.1| hypothetical protein bcere0007_41890 [Bacillus cereus AH621]
gi|228648119|gb|EEL04163.1| hypothetical protein bcere0014_42410 [Bacillus cereus BDRD-ST196]
Length = 266
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 116/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG+ + +L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGIILGVLAVVVGMVVKGADITALLNPAAALIIFVGTFAAVCIAFPMNQLKKVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D+ +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDEIED--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAELEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|229013712|ref|ZP_04170841.1| hypothetical protein bmyco0001_41210 [Bacillus mycoides DSM 2048]
gi|228747634|gb|EEL97508.1| hypothetical protein bmyco0001_41210 [Bacillus mycoides DSM 2048]
Length = 266
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 116/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG+ + +L ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGIILGVLAVVVGMVVKGADITALLNPAAALIIFVGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D+ +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDEIED--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAELEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|308071043|ref|YP_003872648.1| hypothetical protein PPE_04350 [Paenibacillus polymyxa E681]
gi|305860322|gb|ADM72110.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 275
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 47/252 (18%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
F GG L+Q +IV G V++ P +K +L F + Y +
Sbjct: 20 FLWEGGEFTGLLQGTSALIVFGGTFAAVVISYPASKLKTIPTALRMAFSREDNPTKQYIE 79
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
L + ++ E + F+ + ++++I G
Sbjct: 80 ---DLVSMAATSRRSGVLALER-----------------TSSEHPNAFLREGLQLVIDGT 119
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+I+ +++ E+D I ++ G P +GI+G ++G+I +G+L++ P
Sbjct: 120 -EQEQIKQILELELDAIEHKHEGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSLTE-PTA 177
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
LG +I V+ TL G+ + + P+ S+I++ + ++ + ++A NG P++
Sbjct: 178 LGPSIAVAFIATLYGVASANLIFLPIASKIRAASESEIITMDLLLQGILAIQNGENPKLV 237
Query: 258 IEYGRKVLPLSE 269
+ + +
Sbjct: 238 RKKLEFFIRSEQ 249
>gi|154250210|ref|YP_001411035.1| MotA/TolQ/ExbB proton channel [Fervidobacterium nodosum Rt17-B1]
gi|154154146|gb|ABS61378.1| MotA/TolQ/ExbB proton channel [Fervidobacterium nodosum Rt17-B1]
Length = 262
Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 54/278 (19%), Positives = 114/278 (41%), Gaps = 22/278 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ +IG+ + ++ G + G+ I +VI G + + AN V+
Sbjct: 3 ITVLIGVVLGFGMMVYGIISGSGDFATFINIPSLVITVGGAISSAITANKKNVVFGIVKV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ + Y L+ L ++ E +I++ +
Sbjct: 63 IMGAIKEPKI---DYVGTLRTLVSFSEKARREGLLSLEANIEEIQD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +++++ G + N+M+ EID+ E + +G PA G++G
Sbjct: 106 ---PYFKKAIQLVVDGT-EPEVLRNMMEIEIDMATAEMMDQKAFFDSLGTFGPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + +L+ +P+ LG ++ V+L TL G IL+ + P+ +I +
Sbjct: 162 LVGLIQMLKSLN-NPETLGPSMAVALITTLYGSILANIVGIPVAEKIAKRAADLEVFKRM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+ + +I+ G P+V E + LP ER E Q
Sbjct: 221 ILEGIISIQAGENPRVLEEKLKSYLPSQERTKYEAQVQ 258
>gi|302342670|ref|YP_003807199.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301639283|gb|ADK84605.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 261
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 108/272 (39%), Gaps = 25/272 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TI+G+F + I G ++ GG + I ++IV G L ++ PL + + +
Sbjct: 4 ATILGIFSGLALISGAIFSQGG-VDLFINLPSMMIVMGGTLAATLITFPLPEVVHAFRAA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++F + + + +V++LL L ++ +
Sbjct: 63 SQVFRQRKINPN---EVVRLLLTLANISRRQGLVALSK--------------------VK 99
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ M+I A I + EID + + MG P+ G++G +
Sbjct: 100 TNDAVLKKALMLIADGAPEELIRQTLRIEIDALRARHMDAQDVFKKMGSYAPSFGMLGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ +G L P +G A+ V+L T G +LS P+ ++++ + ++
Sbjct: 160 IGLVQMLGQLDD-PATIGPAMAVALITTFYGSLLSSLFFLPIAGKLRNRTNIELVNLELI 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ ++ + P + E +P +R +
Sbjct: 219 FEGAVSILENNNPMLIYEKLSSFIPPKQREAY 250
>gi|297538887|ref|YP_003674656.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297258234|gb|ADI30079.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 246
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 108/264 (40%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S++ GL + ++ I+ G GG LIQP ++IV G ++ + +
Sbjct: 4 SSLGGLVLALIGILLGQAIEGGQISSLIQPAALLIVMCGTFGAVLLQSNTASFIAGLKMV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++F D + + + +K E ++ E
Sbjct: 64 RQVFSPP---LDDRQALANRIILWSNFARKEGIFMLETYLK-----------------KE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI ++++I G +I ++ ++ ++ S G P +GI+GA+
Sbjct: 104 TDPFIQKGLKLMIDGT-PPEKIRQVIAIDMHFFEIQERNAAKIWSAAGGYAPTVGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I M NLS P LG+ I V+ T+ G+ L+ + P+++++KS + ++
Sbjct: 163 LGLIHVMENLSD-PSRLGSGIAVAFVATIYGVGLANLVFLPVSNKLKSLIQHEMMRREML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
A ++ +G P+V E L
Sbjct: 222 LNAWVSIASGDHPRVVEERLLAYL 245
>gi|118443368|ref|YP_877985.1| chemotaxis motA protein [Clostridium novyi NT]
gi|118133824|gb|ABK60868.1| chemotaxis motA protein [Clostridium novyi NT]
Length = 269
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 103/275 (37%), Gaps = 22/275 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ II G GG + I + I G ++ P +K
Sbjct: 6 ILTLVGMLAGFGVIIYGMLGGGGTFGMFIDMPSVAITIGGSFCALLVNYPADELKRVFKV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + F ++ D++ L ++ E+ I+
Sbjct: 66 LAQSFKETSMSG---LDIVSQFGDLSKKARREGLLSLEDDIE-----------------K 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ ++M++ G I +++ EI + + PA G++G
Sbjct: 106 VKDDYLRKGLQMVVDG-IEPETIREILELEIGEMEKRHKDGADVLKAWAGYAPAFGMLGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL P LG + +L T G +++ + NP+ + + K+ + +
Sbjct: 165 LIGLIQMLANLDD-PGNLGPGMSKALITTFYGSLIASLILNPMAANLMYKSSKECTIREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A +G P++ E L ++ +
Sbjct: 224 MLEGVLAIQSGVNPRIVEEKLVSYLNPVDKKIYQE 258
>gi|331269324|ref|YP_004395816.1| chemotaxis MotA protein [Clostridium botulinum BKT015925]
gi|329125874|gb|AEB75819.1| chemotaxis MotA protein [Clostridium botulinum BKT015925]
Length = 269
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 106/275 (38%), Gaps = 22/275 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ I+ G GG + + + I G ++ P+ +K
Sbjct: 6 ILTLVGMVAGFGVIVYGMLGGGGTFGMFVDVPSLGITVGGSFCSLLVNYPVNELKRIFKV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + F ++ D+++ L ++ E I+ +
Sbjct: 66 LAQSFKETSMSG---LDIVRQFGELSKKARREGLLSLEEDIERVED-------------- 108
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I +++ E+ + + G PA G++G
Sbjct: 109 ---AYLKKGLRMVVDG-IEPETIREILELEVGEMEKRHKDGADVLKAWGGYAPAFGMLGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL P LG +G +L T G +++ + NP+ + + ++ + +
Sbjct: 165 LIGLIQMLANLDD-PSNLGPGMGKALITTFYGSLMASLILNPMAANLMYKSSQEVTIREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A +G P++ E L ++
Sbjct: 224 MLEGVLAIQSGVNPRIVEEKLVSYLNPVDKQIYSE 258
>gi|224368747|ref|YP_002602908.1| MotA1 [Desulfobacterium autotrophicum HRM2]
gi|223691463|gb|ACN14746.1| MotA1 [Desulfobacterium autotrophicum HRM2]
Length = 253
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 115/274 (41%), Gaps = 23/274 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG+ I I +G + ++IV G + ++A PL
Sbjct: 3 LASIIGIVSGIGFICV-TILLGSGMGLFWNLPSVMIVVGGTIAATMIAYPLSDFLSIVKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++F +K + D++ L + +KG E+ I +
Sbjct: 62 TMKVFLFKIEKTE---DIIANLVEISNKARKGGLLSIESDIAN----------------- 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ ++M + G ++ +I +M +++ +I E Y S MG PA G+VG
Sbjct: 102 TPDAYLAKALQMTVDG-VKTGDIAAIMQKKMALIKKEHKTGYSLYSSMGSFAPAFGMVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + NL P +G + V++ T G +++ P+ ++++ ++ I
Sbjct: 161 LIGLVQMLANLDD-PSTIGPKMAVAMITTFYGSVMANLFFIPMATKLEGRSAEEITNMTI 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + +++ G P++ + L +P E
Sbjct: 220 IYEGVVSIREGEHPRLMEDKLNVYLGAGAKPKEE 253
>gi|313902671|ref|ZP_07836070.1| MotA/TolQ/ExbB proton channel [Thermaerobacter subterraneus DSM
13965]
gi|313467109|gb|EFR62624.1| MotA/TolQ/ExbB proton channel [Thermaerobacter subterraneus DSM
13965]
Length = 284
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 99/265 (37%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IGL I ++ GG L+ P ++V G L + + L + +
Sbjct: 3 LGTVIGLIAGIAVVLIANVMEGGRLDQLLNPSASLLVFGGTLAATLASAGLHNVLLVPGA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ L +++ L L ++ E N
Sbjct: 63 IAYALRAPKLQPGA---LIEKLVSLAQQARREGLLSLEEE-----------------RKN 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F ++ +I G A +E +M+ + L + G P +GI+G
Sbjct: 103 LDDPFFAKGLQFVIDG-ADPEMVEEVMENALQAEQRHYLVAAGVLETAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I +GNL + LG AI V+ T GI + L PL S+IK+ + L +
Sbjct: 162 VLGLIHVLGNLEDT-SSLGPAIAVAFMATFYGIASANLLWLPLASKIKANVQAEAELRRM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
V + +++ NG P + E L
Sbjct: 221 VVEGILSIQNGDNPMIVREKLEAFL 245
>gi|330830038|ref|YP_004392990.1| flagellar motor component MotA [Aeromonas veronii B565]
gi|328805174|gb|AEB50373.1| Flagellar motor component MotA [Aeromonas veronii B565]
Length = 252
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++IGL + ++ I+GG GG+P L+ +IV G +G + P V+ +
Sbjct: 2 SLIGLVLALIAILGGNMIEGGHPSALLDLPAFLIVIGGTIGAALTQFPFSVVGSTMRRFK 61
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + + +LL L N ++ E I++ +
Sbjct: 62 W---LLSPLKLDLLEQAQLLETLAGNARRSGMLALEGMIEEIKD---------------- 102
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ ++M++ G ++ +I +++ EI+ + + MG P +GIVGA+
Sbjct: 103 -PFLKKGVQMMVDGYEKA-KIHEVLENEIEFEQEDLEQTVKFYEAMGGYCPTMGIVGAVF 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I AMG L +P LG AI V+ T+ G+ + + P ++ K + +
Sbjct: 161 GLIHAMG-LLDAPDKLGGAIAVAFIATIYGVSAANLIFLPFGNRYKGFAHQIRHYKEMTL 219
Query: 243 KALIAYMNGAI 253
++ ++G
Sbjct: 220 TGILCIVDGES 230
>gi|253681791|ref|ZP_04862588.1| chemotaxis protein PomA [Clostridium botulinum D str. 1873]
gi|253561503|gb|EES90955.1| chemotaxis protein PomA [Clostridium botulinum D str. 1873]
Length = 269
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 108/275 (39%), Gaps = 22/275 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ I+ G GG+ + + + I G ++ P+ +K
Sbjct: 6 ILTLVGMLAGFGVIVYGMLGGGGSFGMFVDVPSLGITVGGSFCSLLVNYPINELKRIFKV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + F ++ D++K L ++ E I+ +
Sbjct: 66 LAQSFKETSMSG---LDIVKQFGELSKKARREGLLSLEEDIERVED-------------- 108
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ +RM++ G I +++ EI + + G PA G++G
Sbjct: 109 ---AYLKKGLRMVVDG-IEPETIREILELEIGEMEKRHKDGSEVLKAWGGYAPAFGMLGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL P LG +G +L T G +++ + NP+ + + ++ + +
Sbjct: 165 LIGLIQMLANLDD-PSNLGPGMGKALITTFYGSLMASLILNPMAANLMYKSSQEVTIREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A +G P++ E L ++ +
Sbjct: 224 MLEGVLAIQSGVNPRIVEEKLISYLNPVDKQAYFE 258
>gi|331006365|ref|ZP_08329675.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
gi|330419825|gb|EGG94181.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
Length = 248
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 106/265 (40%), Gaps = 22/265 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IG+ I ++GG + GG L+ +IV G +G ++ P+ + +
Sbjct: 6 FSVIGIMIAFAALLGGNFLEGGAWQQLLNGPAALIVFGGTIGAAILQTPMSSLSRALKLS 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + Y + + +K E+ ++ E
Sbjct: 66 RWVLFPPTI---DYKKTISKIANWSTIARKNGLLGLESQVE-----------------IE 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+I ++++I + + +++ ++ + + MG P +GI+GA+
Sbjct: 106 KDPYIQKALKLLIDEGS-PQTLRRVLESDLILDEQRDQDAVRFYASMGGYAPTVGIIGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I M NL P +LG+ I V+ T+ G+ L+ L P+ +++ + +Q L +V
Sbjct: 165 MGLIYVMRNLDD-PSLLGSGIAVAFIATIYGVALANLLLLPIANKLTTYINQQSHLKELV 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLP 266
+ + +G P+ +P
Sbjct: 224 IEGTVYVADGENPRSIKLKLDGFIP 248
>gi|317153384|ref|YP_004121432.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316943635|gb|ADU62686.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 250
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + MGGN + I IV G + PL V+ +
Sbjct: 3 IATLIGLVGAFGLVFAA-IFMGGNAAGFVDIPSIAIVVGGTFAVTFVMFPLGVVIGTIKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
L+ K+ + ++++L+ L +K S E IDDP
Sbjct: 62 GLKTLMIKS---NDPQNIIRLITSLADTARKQSLVSLEKVAIDDP--------------- 103
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + M++V + + ++M+ E+D + + MG PA G++G
Sbjct: 104 -----FLKKGV-MLVVDGSSETLVRSVMEIELDFMRQRHRQGQSVFKGMGTMAPAFGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + NLS P +G A+ V+L T G +L+ + P+ ++++ +
Sbjct: 158 TLIGLVNMLSNLSD-PSSIGPAMAVALLTTFYGAVLANCVFLPMATKLEERSAEDALFMQ 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + + + G P V E + L + R
Sbjct: 217 IMIEGVASLQRGDHPTVVKEKLQAFLAPAMR 247
>gi|330899882|gb|EGH31301.1| flagellar motor protein MotA [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 181
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 99/182 (54%), Gaps = 1/182 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKVMALFQPYEVLIIGGAALGAFLQANPGYMFMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IF P VL++
Sbjct: 61 SLKMF-GTRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+T +ICDY+R++ GN +E+E L D E+ + + P HAI+ + + +P GIV A
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEDLEHPSHAITGIADGMPGFGIVAA 179
Query: 181 IL 182
+L
Sbjct: 180 VL 181
>gi|266623346|ref|ZP_06116281.1| chemotaxis protein PomA [Clostridium hathewayi DSM 13479]
gi|288864884|gb|EFC97182.1| chemotaxis protein PomA [Clostridium hathewayi DSM 13479]
Length = 283
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 113/286 (39%), Gaps = 29/286 (10%)
Query: 1 MSTIIGLFITILCIIGGFY-------AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKV 53
+ +I+G + ++ ++ G + N I + I G +G +++ P
Sbjct: 3 IMSILGFILAVVLVLFGMTFDQEAMKLVFHNLRAFIDLPSMAITIGGTIGVMMLSFPSGA 62
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
K G L I + + + L + E+ +++ + S+
Sbjct: 63 FKKIGKHLKIIIKPYKFDPEQSIE---QIVELATEARMKGLLSLEDKLNEIDEPFMHNSL 119
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
+++V + S ++ +M+ E+D + P
Sbjct: 120 ------------------LLVVDSVDSEKVRQVMETELDQLDERHALDRGFYEKAASFAP 161
Query: 174 AIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
A G++G ++G+I +GN+ Q L + +L TL G +L+ +C P+ S++K+ +
Sbjct: 162 AFGMIGTLVGLILMLGNM-QDVNALAKGMATALITTLYGSLLANIVCLPVASKLKARHDE 220
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ +V + ++A +G P+ E K+LP S + + E +E
Sbjct: 221 EFLCKQLVLEGVLAIQDGENPKFIEEKLYKLLPASRKKAEEDTEKE 266
>gi|253998498|ref|YP_003050561.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313200584|ref|YP_004039242.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253985177|gb|ACT50034.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312439900|gb|ADQ84006.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 246
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 105/263 (39%), Gaps = 22/263 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
++ G+ + I I+ G GG LIQP +IV G ++ + K + L
Sbjct: 5 SLGGILLAIFGILLGQAIEGGKVASLIQPAAFLIVVFGTFGAVLLQSKPANFKLGIMLLR 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
I D ++ + + + ++ + E + NE
Sbjct: 65 WIVQPPV---DDRKELSRRIIGWSHTARRDGLLKLEAQL-----------------YNET 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
FI +R++I G + +I + +I + G P IGI+GA+L
Sbjct: 105 DPFIKKGLRLLIDG-IAADKIREICAIDIYYYESQYRSAAKIWDSAGGYAPTIGILGAVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I M NLS P LG+ I V+ T+ G+ L+ + P+ S++K+ L++ ++
Sbjct: 164 GLIHVMENLSD-PSRLGSGIAVAFVATIYGVGLANIVFLPIGSKLKAYVLQEASRREMLM 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVL 265
A ++ G +V E +
Sbjct: 223 NAWVSIAQGDHTRVVEERLNSYM 245
>gi|253575921|ref|ZP_04853255.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844715|gb|EES72729.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
Length = 278
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 117/270 (43%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + + ++GGF GG L+Q +IV G +++ P+ ++ +
Sbjct: 3 IATLIGIIVGLAALVGGFTLEGGQLGGLLQVTAALIVFGGTFAAVLISFPVAKLRTVPKA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F K+ QD V++ + + ++ E
Sbjct: 63 LALAFMTKSPAQDG---VIEDIVEMSSTSRREGVLALEKK-----------------AAE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++++ G R+ + +M+ EID + + G P +GI+G
Sbjct: 103 HRDPFLREGIQLVVDGTDRAM-VRQIMELEIDAVSKKYDGYAKIFESAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +G+LS+ P LG +I ++ T TL G+ + + P+ S+IK+ + +
Sbjct: 162 VMGLIHVLGSLSE-PTALGPSIALAFTATLYGVASANLIFLPIASKIKARGDDEIDRMEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ NG P + + R
Sbjct: 221 MLEGILSIQNGDHPLLVRRKLESFTAETAR 250
>gi|119470008|ref|ZP_01612813.1| putative Chemotaxis motA protein [Alteromonadales bacterium TW-7]
gi|119446718|gb|EAW27991.1| putative Chemotaxis motA protein [Alteromonadales bacterium TW-7]
Length = 254
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 108/272 (39%), Gaps = 24/272 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++GL + + I G++ GG L ++IV G +G ++ K
Sbjct: 4 LSVLGLIVALSAIAIGYHLEGGVIAALFNGPALIIVLGGTVGAVMLQTSTSTFKKMLRMS 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + D D ++ + + ++ E+
Sbjct: 64 HWVFVTPSYNID---DAIEQVKRWSHKARQEGYLALEDE-----------------ALTH 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ + +++ G + + + ++ ++ + L+ MG P IGI+GA+
Sbjct: 104 SDVYAAKGLSLLVDGGSE-QRLRDTLEIDLMLERERLLEAARVYEAMGGYSPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+AM ++ P++LG + + T+ G+ L+ L P+ ++K ++ + ++
Sbjct: 163 LGLIQAMSFITD-PQLLGAGVATAFIATIYGVGLANLLFLPMAHKLKQRVEEKMLYHEML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ +IA +G P ERPS+
Sbjct: 222 AEGIIAISDGQSPMNIELKLEAY--RVERPSL 251
>gi|205374482|ref|ZP_03227278.1| flagellar motor protein MotP [Bacillus coahuilensis m4-4]
Length = 274
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 107/291 (36%), Gaps = 24/291 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
+ T +G+ + I G + G I I++V G +++ L+ +K
Sbjct: 6 IFTPVGIVVGFGFIAFGIISNSGIGGFTSFIDVPSILVVFGGLTAAMLVSFSLRELKSLF 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ E F + ++ L ++ E ++ + I +
Sbjct: 66 TIMREGFRTEEF---DIRGLISTFVTLSERARREGLLALEAELEKVDDPFIKKGV----- 117
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
++ V I ++M+ E+ + + GE PA G++
Sbjct: 118 -------------LLAVDGIEPDVIVDIMNAELTALEDRHRGGRDLLDKAGEYAPAWGMI 164
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ + NL+ P LG + ++L T G +LS + PL+ ++ K+
Sbjct: 165 GTLIGLVLMLKNLND-PTTLGPNMAIALLTTFYGSLLSNLVFIPLSGKLAVRTKKEIFYK 223
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
I+ + +I +G P++ E L ++R + + Q +A
Sbjct: 224 QIIIEGVIGVQSGQNPKLLEEKLSVFLSKTDREKEQQKVEADGQEAVLNEA 274
>gi|256370965|ref|YP_003108789.1| MotA/TolQ/ExbB proton channel [Acidimicrobium ferrooxidans DSM
10331]
gi|256007549|gb|ACU53116.1| MotA/TolQ/ExbB proton channel [Acidimicrobium ferrooxidans DSM
10331]
Length = 267
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 59/289 (20%), Positives = 119/289 (41%), Gaps = 25/289 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T +G+ + ++ I+ GGNP LI P +++V +G + LK I +L
Sbjct: 4 ATPVGIVVALVAILVSMIMDGGNPAALIAPSAMILVLVGTVGVSLAGRRLKEIGQIVGAL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
KA + + + L ++ E D
Sbjct: 64 RSAILAKAPSAE---ESVGQLVHFAEMARREGVLALEAAAKD-----------------L 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M++II G +I +++ +++ + M P +GI+G +
Sbjct: 104 TDPFMRSGMQLIIDG-VEGDKIREILEADLEGMGTRHRAGAKFFKDMAGFAPTLGILGTV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I + NLS SP+ LG AI + T TL G++ + P+++++ +++ L ++V
Sbjct: 163 MGLIHVLANLS-SPQTLGPAISGAFTATLWGVMTANVFWLPISNKLAHLSEQENALRLLV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
++A GA P++ + L + R + + + KKA+
Sbjct: 222 IDGILAIQAGASPRLLEQQLLSFLAPTAREAHRTAKE---RAKPQKKAA 267
>gi|168186128|ref|ZP_02620763.1| chemotaxis protein PomA [Clostridium botulinum C str. Eklund]
gi|169295763|gb|EDS77896.1| chemotaxis protein PomA [Clostridium botulinum C str. Eklund]
Length = 268
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 102/271 (37%), Gaps = 22/271 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ ++ G GG + I + I G L ++ P K
Sbjct: 6 ILTLVGMLAGFAVLVYGMLGGGGTLGMFIDMPSVAITIGGSLCALLVNYPADEFKRVIKV 65
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + F ++ +++ L ++ E+ I+
Sbjct: 66 LAQSFKETSMSA---LEIVSQFGELSKKARREGLLSLEDDIE-----------------K 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ ++M++ G I +++ EI + + PA G++G
Sbjct: 106 VKDDYLRKGLQMVVDG-IEPETIREILELEIGEMEKRHKDGSDVLKAWAGYAPAFGMLGT 164
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL P LG + +L T G +++ + NP+ + + K+ + +
Sbjct: 165 LIGLIQMLANLDD-PSNLGPGMSKALITTFYGSLIASLILNPMAANLMYKSSKECTIREM 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ + ++A +G P++ E L ++
Sbjct: 224 MLEGVLAIQSGVNPRIVEEKLVSYLNPIDKK 254
>gi|87307402|ref|ZP_01089547.1| chemotaxis pomA protein [Blastopirellula marina DSM 3645]
gi|87290142|gb|EAQ82031.1| chemotaxis pomA protein [Blastopirellula marina DSM 3645]
Length = 244
Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 22/258 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
A G + I +++V G + +MA PLK I S ++L F K +
Sbjct: 8 IAPGSSLAAFIDAPSLLVVCGGAVAACMMAFPLKSIVGSPMALKVCFLNK---PTDVVAL 64
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+K + L ++ E I + N FI ++M + G A
Sbjct: 65 IKEIVSLAETARRDGLLALEGRIAEISN-----------------PFIIVGIQMAVDG-A 106
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
R IE+L+ EID + MG PA G++G +LG+I +GN+S P +
Sbjct: 107 RPDVIEDLLRTEIDAVATRHRDTKAIYDQMGRFAPAYGMIGTLLGLIIMLGNMSD-PSSI 165
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G+ + V+L TL G I+S + P ++ ++ I+ + ++A +G P+V
Sbjct: 166 GSGMAVALLTTLYGAIVSNCVFLPFAEKLSFLNKQELLTMEIIVRGIMAIQSGENPRVIE 225
Query: 259 EYGRKVLPLSERPSIEIV 276
+ R LP + R E
Sbjct: 226 QKLRTFLPPAARKKSEEA 243
>gi|220913722|ref|YP_002489031.1| MotA/TolQ/ExbB proton channel [Arthrobacter chlorophenolicus A6]
gi|219860600|gb|ACL40942.1| MotA/TolQ/ExbB proton channel [Arthrobacter chlorophenolicus A6]
Length = 276
Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 108/268 (40%), Gaps = 22/268 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGLF+ + G + L+ P +V+V GA L + N L+ + + L
Sbjct: 4 ATIIGLFLAFGSVYVMVTLEGAHVEALLLPAPMVLVFGATLAVGLAGNTLRDVIQAFKDL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F K D ++LL + E+
Sbjct: 64 PRAFVAKPAKPQ---DSIELLVGYAEKARSEGLLALEDE-----------------AGTA 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++ I G + E+ LM++EID + + +G P IGI+G +
Sbjct: 104 KDPFVSRALQNIADGT-DADELRTLMEDEIDTKMRRDRISSKFFASLGGYAPTIGIIGTV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+ + + NLS +P LG I + TL G++ + L P +S++K + ++
Sbjct: 163 VSLTHVLENLS-TPDHLGPMIATAFVATLWGLVSANFLWLPFSSRLKRLSDLEIEQMTLL 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ ++A NG P + E R ++P ++
Sbjct: 222 MEGMLAVQNGTQPLLLAERLRAMVPANQ 249
>gi|157364673|ref|YP_001471440.1| MotA/TolQ/ExbB proton channel [Thermotoga lettingae TMO]
gi|157315277|gb|ABV34376.1| MotA/TolQ/ExbB proton channel [Thermotoga lettingae TMO]
Length = 262
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 53/280 (18%), Positives = 116/280 (41%), Gaps = 22/280 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+F+ I+ G A + + + I G + + ++P +
Sbjct: 3 ISTILGIFMAFGMIVFGIIANKSSLGVYYNLPSLFITIGGAIASTIASHPKEKSFKIIQV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F + +++ L ++ E ++++ +
Sbjct: 63 MMSTFKEPKI---DNVGLVRTLVSFSEKARREGLLSLEENLNEIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++++I G ++N+M+ E+D+I + + G PA G++G
Sbjct: 106 ---PFMKKALQLVIDGT-DPDLLKNMMETEMDLIEEDLAGEKALMDSAGAYAPAYGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + L+ +P+ LG + V+L T G ILS ++ P+ +I K R +
Sbjct: 162 LIGLIAMLKTLN-NPETLGPGMSVALITTFYGSILSNAVFLPMGEKIGKRAAKILRQKQM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ + +++ G P+V E + L E+ E QE
Sbjct: 221 ILEGVLSIQAGENPRVLEEKLKSFLTNQEKVVYEAAIQEA 260
>gi|38327417|gb|AAR17737.1| motility protein A [Bdellovibrio bacteriovorus]
Length = 250
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 58/272 (21%), Positives = 106/272 (38%), Gaps = 28/272 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T IG+ + + I+ G GG+ L+Q +IV +G ++++ K +K
Sbjct: 4 ATWIGILVGVGGILLGNLLEGGHTSSLMQLTAFIIVLTGTIGAVMVSSSEKDLKTGLQLA 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETE---NHIDDPYNSTIFTSIPTVLE 118
+ F ++ L + KK + E N I+DP + +
Sbjct: 64 KKAFRHEESRSKVR---LNEIVDCARLAKKENILALEPRLNRIEDPLLKGVLRN------ 114
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+V I ++ + +I E L + G P IGI+
Sbjct: 115 ---------------VVDGVDITTIRDIFETQIHTEEEELLGGAKIWTDAGGFAPTIGII 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA+LG+I MGNL+ + LG I V+ T+ G+ + L PL +++K R
Sbjct: 160 GAVLGLIHVMGNLTDT-SKLGAGIAVAFVATVYGVSSANLLFLPLGNKLKRRVQALTREK 218
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++V + + +G P V + L ++
Sbjct: 219 MMVLEGGLLIASGMNPVVLEQKLYAYLDSDQK 250
>gi|238916757|ref|YP_002930274.1| chemotaxis protein MotA [Eubacterium eligens ATCC 27750]
gi|238872117|gb|ACR71827.1| chemotaxis protein MotA [Eubacterium eligens ATCC 27750]
Length = 267
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 103/281 (36%), Gaps = 28/281 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAM------GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVI 54
++T++G+ I ++ G G + I + G L G + + K
Sbjct: 3 LATLLGIIIGFGMVVLGIITSTTNPTLKGIMDTFVDIPSIAVTIGGSLAGMLTSYTFKTF 62
Query: 55 KDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIP 114
L V+ + L +K E
Sbjct: 63 IGHLKGFSIAMKDPKL---DNGQVISKIIELSNTARKEGLLALEE--------------- 104
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+ F+ + ++IV + +++ E+ + + PA
Sbjct: 105 --VAQGLDDEFMKKGI-LLIVDGTEPELVRGILETELVNLDTRHKSTIGFFDNWAALAPA 161
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G++G +LG++ + NLS S +G + V+L TL G +++ LC P+++++K +
Sbjct: 162 WGMIGTLLGLVNMLKNLSDSAS-IGPNMAVALLTTLYGSLIANWLCVPISNKLKLQNNDE 220
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++L I+ + L++ G P+V E + L S R ++
Sbjct: 221 YQLREIIIEGLLSIQAGENPRVIEEKLKSFLSPSARTALSE 261
>gi|170688312|ref|ZP_02879522.1| chemotaxis protein MotA [Bacillus anthracis str. A0465]
gi|170667818|gb|EDT18571.1| chemotaxis protein MotA [Bacillus anthracis str. A0465]
Length = 264
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ L +A P+ +K
Sbjct: 4 ATIIGLILGFVAVVVGMVVKGADVTSLLNPAAALIIFIGTLAAVCIAFPMNQLKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ G+ Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGVFSGYVLWHPFANKLKQKSAAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGSLSATERKKLEKGAEK 261
>gi|30264579|ref|NP_846956.1| flagellar motor protein MotA [Bacillus anthracis str. Ames]
gi|47530049|ref|YP_021398.1| flagellar motor protein MotA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187404|ref|YP_030656.1| flagellar motor protein MotA [Bacillus anthracis str. Sterne]
gi|49478674|ref|YP_038564.1| flagellar motor protein MotA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140990|ref|YP_085839.1| flagellar motor protein MotA [Bacillus cereus E33L]
gi|165871522|ref|ZP_02216169.1| chemotaxis protein MotA [Bacillus anthracis str. A0488]
gi|167635574|ref|ZP_02393886.1| chemotaxis protein MotA [Bacillus anthracis str. A0442]
gi|167641683|ref|ZP_02399928.1| chemotaxis protein MotA [Bacillus anthracis str. A0193]
gi|170708377|ref|ZP_02898821.1| chemotaxis protein MotA [Bacillus anthracis str. A0389]
gi|177653128|ref|ZP_02935415.1| chemotaxis protein MotA [Bacillus anthracis str. A0174]
gi|190566888|ref|ZP_03019804.1| chemotaxis protein MotA [Bacillus anthracis Tsiankovskii-I]
gi|196034374|ref|ZP_03101783.1| chemotaxis protein MotA [Bacillus cereus W]
gi|196039359|ref|ZP_03106665.1| chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|196044776|ref|ZP_03112010.1| chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|218905737|ref|YP_002453571.1| chemotaxis protein MotA [Bacillus cereus AH820]
gi|225866486|ref|YP_002751864.1| chemotaxis protein MotA [Bacillus cereus 03BB102]
gi|227817294|ref|YP_002817303.1| chemotaxis protein MotA [Bacillus anthracis str. CDC 684]
gi|229600505|ref|YP_002868792.1| chemotaxis protein MotA [Bacillus anthracis str. A0248]
gi|254686998|ref|ZP_05150856.1| flagellar motor protein MotA [Bacillus anthracis str. CNEVA-9066]
gi|254724561|ref|ZP_05186344.1| flagellar motor protein MotA [Bacillus anthracis str. A1055]
gi|254736616|ref|ZP_05194322.1| flagellar motor protein MotA [Bacillus anthracis str. Western North
America USA6153]
gi|254741654|ref|ZP_05199341.1| flagellar motor protein MotA [Bacillus anthracis str. Kruger B]
gi|254754748|ref|ZP_05206783.1| flagellar motor protein MotA [Bacillus anthracis str. Vollum]
gi|254757580|ref|ZP_05209607.1| flagellar motor protein MotA [Bacillus anthracis str. Australia 94]
gi|30259237|gb|AAP28442.1| chemotaxis protein MotA [Bacillus anthracis str. Ames]
gi|47505197|gb|AAT33873.1| chemotaxis protein MotA [Bacillus anthracis str. 'Ames Ancestor']
gi|49181331|gb|AAT56707.1| chemotaxis protein MotA [Bacillus anthracis str. Sterne]
gi|49330230|gb|AAT60876.1| chemotaxis protein (motility protein A) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51974459|gb|AAU16009.1| chemotaxis motA protein (motility protein A) [Bacillus cereus E33L]
gi|164712819|gb|EDR18349.1| chemotaxis protein MotA [Bacillus anthracis str. A0488]
gi|167510390|gb|EDR85791.1| chemotaxis protein MotA [Bacillus anthracis str. A0193]
gi|167528994|gb|EDR91749.1| chemotaxis protein MotA [Bacillus anthracis str. A0442]
gi|170126752|gb|EDS95635.1| chemotaxis protein MotA [Bacillus anthracis str. A0389]
gi|172081652|gb|EDT66723.1| chemotaxis protein MotA [Bacillus anthracis str. A0174]
gi|190561879|gb|EDV15848.1| chemotaxis protein MotA [Bacillus anthracis Tsiankovskii-I]
gi|195992916|gb|EDX56875.1| chemotaxis protein MotA [Bacillus cereus W]
gi|196024264|gb|EDX62937.1| chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|196029986|gb|EDX68587.1| chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|218538314|gb|ACK90712.1| chemotaxis protein MotA [Bacillus cereus AH820]
gi|225789563|gb|ACO29780.1| chemotaxis protein MotA [Bacillus cereus 03BB102]
gi|227002544|gb|ACP12287.1| chemotaxis protein MotA [Bacillus anthracis str. CDC 684]
gi|229264913|gb|ACQ46550.1| chemotaxis protein MotA [Bacillus anthracis str. A0248]
Length = 264
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ L +A P+ +K
Sbjct: 4 ATIIGLILGFVAVVVGMVVKGADVTSLLNPAAALIIFIGTLAAVCIAFPMNQLKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGSLSATERKKLEKGAEK 261
>gi|320354326|ref|YP_004195665.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
gi|320122828|gb|ADW18374.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
Length = 254
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 115/273 (42%), Gaps = 23/273 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ ++ +I MGG I I I IV G G ++ PL + +
Sbjct: 3 IATIIGIVVSFGLMIWA-ILMGGPLSIFIDVPSIAIVFGGTAGVALINFPLADVIGTIAI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ K + ++ + +KG ++ ID +
Sbjct: 62 FKKTVFIKEAETNK---IIVQMLEFANKARKGGILSLQDQIDSIDDK------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M + G E++ ++ EID I + MG PA+G+VG
Sbjct: 106 ----FMVKALQMAVDGQ-EPAELKAMLLNEIDNIAARHSNGAQILDTMGAIAPAMGMVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+S P +G A+ V+L T G +L+ L P+ ++K+ + +
Sbjct: 161 LIGLVQMLQNMSD-PAAIGPAMAVALLTTFYGAVLANVLFIPMAGKLKTRSKTEVLQKTM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ + + + ++G P+V + L +R S+
Sbjct: 220 ITEGMESILSGENPRVMEQRLHTYLAPKKRESV 252
>gi|94969960|ref|YP_592008.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
gi|94552010|gb|ABF41934.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
Length = 255
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 105/263 (39%), Gaps = 22/263 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T G+ ++ I+ G GG ++QP +IV G LG ++ P + + +
Sbjct: 6 TFGGVLAAVVGIVAGLLIEGGKISQILQPTAALIVFGGTLGAVMVQFPFHQFLAAARATI 65
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
IF + ++ ++L L Y +K ++ +D +S + ++
Sbjct: 66 TIFRVSSNQRE---EMLDELVRFAYKARKQGIVSLDSDLDTINDSFLKRAL--------- 113
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
M+ V E+ +M+ E+D + + G P IGI+GA+L
Sbjct: 114 ---------MLAVDGTAPGELRKMMELELDQEAEKDERTPQVFEAAGGYSPTIGIIGAVL 164
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ M +L Q+ +G I V+ T+ G+ + P +++ + +
Sbjct: 165 GLIQVMQHL-QNIDEVGRGIAVAFVATIYGVAAANIFFLPAAGKLRIRVREAQLQREMAV 223
Query: 243 KALIAYMNGAIPQVAIEYGRKVL 265
+ +IA + G P++ +
Sbjct: 224 EGVIALLEGMNPRMLETRLSTYV 246
>gi|301056022|ref|YP_003794233.1| flagellar motor protein [Bacillus anthracis CI]
gi|300378191|gb|ADK07095.1| flagellar motor protein [Bacillus cereus biovar anthracis str. CI]
Length = 264
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ L +A P+ +K
Sbjct: 4 ATIIGLILGFVAVVVGMVVKGADVTSLLNPAAALIIFIGTLAAVCIAFPMNQLKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|308174664|ref|YP_003921369.1| flagellar motor rotation protein [Bacillus amyloliquefaciens DSM 7]
gi|307607528|emb|CBI43899.1| motility protein (flagellar motor rotation) [Bacillus
amyloliquefaciens DSM 7]
gi|328554594|gb|AEB25086.1| flagellar motor protein MotP [Bacillus amyloliquefaciens TA208]
gi|328912998|gb|AEB64594.1| motility protein (flagellar motor rotation) [Bacillus
amyloliquefaciens LL3]
Length = 271
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 99/252 (39%), Gaps = 24/252 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G I + I+ G G + +IV G ++ P + +K + L +
Sbjct: 13 MLGCIIVAIGILSGTGLAG--ISSFLDLTSFLIVTGGLAAAVFISFPPRDLKKTPSVLKQ 70
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + D +++++ L ++ E+
Sbjct: 71 VF---SRQDDNVKELVRVFVSLAEQARRQGLLSLEDQ-----------------AREIKD 110
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ + + I G I +MD EI + K G+ PA G++G ++G
Sbjct: 111 PFLKKGLLLAIDGW-DEETIRLVMDSEIAAMEERHRKGRRVFEKAGDFAPAWGMIGTLVG 169
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ + NL+ P LG + ++L TL G +L+ + P+ ++++ + + ++ +
Sbjct: 170 LVLMLKNLND-PHTLGPNMAIALLTTLYGALLANLVFIPIAAKLEEKTESEIFIKQVIIE 228
Query: 244 ALIAYMNGAIPQ 255
++ +G P+
Sbjct: 229 GVVGIQSGKNPR 240
>gi|145298368|ref|YP_001141209.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851140|gb|ABO89461.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 245
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 97/262 (37%), Gaps = 22/262 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+ GL + + I GG L+ VIV G G ++ P K + ++ L
Sbjct: 3 MFGLILALGAIAIAQLWHGGTLLTLLDGPAFVIVVGGTWGAVILQTPRKYLLEAIRQLRW 62
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ A + + L ++ EN + E
Sbjct: 63 MLLPPAW---DLLNQAERLQGWAVFARQQGLLALENQ-----------------ADQESD 102
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F + MI+ G + +I L++ +IDI MG P IGI+GA++G
Sbjct: 103 EFTRQGLTMIVDGVSIE-DIRMLLEADIDIEQERNEHSARVFEAMGGYSPTIGIIGAVIG 161
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I+AM NL + P LG I V+ T+ G+ + P+ +++++ + +
Sbjct: 162 LIQAMFNL-EDPAALGAGIAVAFVATIYGVGFANLFYLPIANRLRAFHYHYALFQEMTLE 220
Query: 244 ALIAYMNGAIPQVAIEYGRKVL 265
L+A +G + L
Sbjct: 221 GLMAIAHGENGPQVERRLKAYL 242
>gi|303239755|ref|ZP_07326279.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
gi|302592692|gb|EFL62416.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
Length = 260
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 21/279 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ I+G+ + II G G N +L+ P +I+ + + P K I + G
Sbjct: 3 IFLIVGIIVGFAAIIVGMIVKGANIEVLLNPAAAIIIIIGTIAATANSFPKKEILNVGKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F K + +++K + L ++ E I+ N
Sbjct: 63 AGVLFSDK--HKVDPGEIIKQILELSQMARREGLLSLEQTIEKTEN-------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M+I G Y I +++ EID + S G + P +G++GA
Sbjct: 107 ---QFMKRSLGMVIDGVEEEY-IREVLNVEIDSMEERHRAAASIFSTAGSAAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ + + L I + TL GI + Y LC+P S++K ++ + I
Sbjct: 163 VIGLIGALGNLNDT-EKLAHMIAAAFVATLYGIFIGYVLCHPFASRLKRKSHEEIAILRI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ + +++ G P+ +L R +E ++
Sbjct: 222 IAEGVLSIQAGESPKSMELKLYGMLEPEVRRKLEQANEK 260
>gi|15643440|ref|NP_228484.1| motility protein A [Thermotoga maritima MSB8]
gi|4981199|gb|AAD35759.1|AE001740_5 motility protein A [Thermotoga maritima MSB8]
Length = 262
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 119/280 (42%), Gaps = 22/280 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + I + G GG+ I + I + ++A+P +
Sbjct: 3 LATLMGLVLVIAALFIGILTGGGDFAAFINIPSLFITVVGSIAATMVAHPKD---KAFKI 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + + +++ + ++ E +++ +
Sbjct: 60 VNIMLSTLKEPKLDHVSLIQTMVSFSEKARREGLLSLEENLESIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G + N+M+ E+++ E + G PA G++G
Sbjct: 106 ---PFMKKALQLVVDGT-DPDLLRNMMETEMELFEEELDGERAVLESAGAYAPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + +L+ P+ LG ++ V+L TL G IL+ + P+ +IK R +
Sbjct: 162 LIGLIQMLKSLND-PETLGPSMAVALITTLYGAILANGVFLPMAEKIKKRRDILVLEKRM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ +A+++ G P++ E + LP ER + E +QE
Sbjct: 221 ILEAVLSIQAGENPRILEEKLKSFLPEKERQAYEAASQEA 260
>gi|317051550|ref|YP_004112666.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316946634|gb|ADU66110.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 255
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 111/272 (40%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ + +I G + + ++IV G +G ++ L +
Sbjct: 3 IATLVGIILAFSLVIMAMALAG-SLGWFVSIPSVLIVFGGTMGVILINFSLSQVTSVMGV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F +K+ + +V+ L ++ E ++ +
Sbjct: 62 VKKSFFHKS---EDPTEVINRLVDFATRARRDGILALETAAEEVDD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ + G + +M+ ++ I ++ +G P++G++G
Sbjct: 105 ---EFLREGIKLAVDGT-DPELVNAIMETKLQYIAQRHQSGMGILNSIGMFAPSMGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + + P +G A+ ++L TL G +++ P+ ++ ++ + I
Sbjct: 161 LIGLVAMLQTMDD-PSTIGPAMAIALLTTLYGSMIANMFALPVAGKLAERSQEELLVKEI 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V +++ G P++ + LP S+R +
Sbjct: 220 VIMGIMSIQAGDNPRIVEQKLNAFLPPSQRKT 251
>gi|90022861|ref|YP_528688.1| flagellar motor protein PomA [Saccharophagus degradans 2-40]
gi|89952461|gb|ABD82476.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 253
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL I+ G + + +VIV G + + L +
Sbjct: 3 LATIVGLIGACALIVIAMLMSG-ELGMFVNGPSLVIVFGGTIFACMAKFSLGTYLSAMKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F K + +++ + L +KG E
Sbjct: 62 AGKSFTNKLPDPNA---LIEEVVALADEARKGGLLSLEG-------------------KE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ +++++ G+ ++ L+ ++ + + + M + PA+G++G
Sbjct: 100 VSSDFLQRGIQLLVDGH-DPDVVKALLSKDKNQAVERHNVGATIFASMADMAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +++ +LC P+ ++K + + + +
Sbjct: 159 LIGLVAMLANMDD-PKAIGPAMAVALLTTLYGAVIANALCGPIADKLKQRAIDEAMIKSL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V ALIA NG P+V R LP +R
Sbjct: 218 VIDALIAIQNGQNPRVIDSLLRNYLPEGKR 247
>gi|65321878|ref|ZP_00394837.1| COG1291: Flagellar motor component [Bacillus anthracis str. A2012]
gi|118479665|ref|YP_896816.1| flagellar motor protein MotA [Bacillus thuringiensis str. Al Hakam]
gi|228917150|ref|ZP_04080708.1| hypothetical protein bthur0012_43620 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228929559|ref|ZP_04092578.1| hypothetical protein bthur0010_42430 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935821|ref|ZP_04098633.1| hypothetical protein bthur0009_42660 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948235|ref|ZP_04110519.1| hypothetical protein bthur0007_43610 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229093608|ref|ZP_04224709.1| hypothetical protein bcere0021_43320 [Bacillus cereus Rock3-42]
gi|229124076|ref|ZP_04253268.1| hypothetical protein bcere0016_43610 [Bacillus cereus 95/8201]
gi|229186745|ref|ZP_04313903.1| hypothetical protein bcere0004_42870 [Bacillus cereus BGSC 6E1]
gi|118418890|gb|ABK87309.1| chemotaxis protein, MotA [Bacillus thuringiensis str. Al Hakam]
gi|228596758|gb|EEK54420.1| hypothetical protein bcere0004_42870 [Bacillus cereus BGSC 6E1]
gi|228659378|gb|EEL15026.1| hypothetical protein bcere0016_43610 [Bacillus cereus 95/8201]
gi|228689817|gb|EEL43623.1| hypothetical protein bcere0021_43320 [Bacillus cereus Rock3-42]
gi|228811593|gb|EEM57930.1| hypothetical protein bthur0007_43610 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228823878|gb|EEM69698.1| hypothetical protein bthur0009_42660 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830138|gb|EEM75756.1| hypothetical protein bthur0010_42430 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228842568|gb|EEM87658.1| hypothetical protein bthur0012_43620 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 266
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ L +A P+ +K
Sbjct: 6 ATIIGLILGFVAVVVGMVVKGADVTSLLNPAAALIIFIGTLAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGSLSATERKKLEKGAEK 263
>gi|94500303|ref|ZP_01306836.1| flagellar motor protein [Oceanobacter sp. RED65]
gi|94427602|gb|EAT12579.1| flagellar motor protein [Oceanobacter sp. RED65]
Length = 247
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 93/245 (37%), Gaps = 22/245 (8%)
Query: 11 ILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKAL 70
I ++ G GG+ L+ +IV G L ++ P + + + +
Sbjct: 13 IAAVVIGNMVEGGHLASLLNLPAAIIVFGGTLAAVLVQTPFNTLLTASMRGWWLIFPPRY 72
Query: 71 GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
D L ++ EN + E +
Sbjct: 73 DLHDLIDTLCQ---WGAAARREGFLGLEN-----------------IAKVEPMPLAKKGL 112
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
++ G + S I N ++ ++ L+ H +G P IGI+GA+LG+I+ MGN
Sbjct: 113 HLLADGQS-SEAIRNSLELDMYKQEDAGLEAAHVYESLGGYAPTIGILGAVLGLIQVMGN 171
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
L Q P +G I + T+ G+ + + P+ S+IK K+++ ++ + L+A
Sbjct: 172 L-QDPAAIGPGIATAFVATIYGVGSANLIFLPIASRIKHIVKKEYQYNELIVEGLVAISE 230
Query: 251 GAIPQ 255
G P
Sbjct: 231 GEHPN 235
>gi|317129963|ref|YP_004096245.1| MotA/TolQ/ExbB proton channel [Bacillus cellulosilyticus DSM 2522]
gi|315474911|gb|ADU31514.1| MotA/TolQ/ExbB proton channel [Bacillus cellulosilyticus DSM 2522]
Length = 270
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 57/271 (21%), Positives = 109/271 (40%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFY---AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
M T IG+F+ + I+ Y GG Q I+IV G ++ + +K
Sbjct: 6 MLTPIGIFLGLTMILLAIYTSEIGGGGAGYFFQVTSILIVLGGLSAAILINFSMADVKSV 65
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+ L E F + +++ L ++ E ++D +
Sbjct: 66 PIVLKETFQTQNH---DIQGLIETFVDLSTKARREGLLALEMGLEDVND----------- 111
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI + ++ V I+++M E+ + K I GE PA G+
Sbjct: 112 ------PFIEKGV-LLAVDGIEPEIIKDIMMAEVVAMEERHRKGRSIIEKAGEYAPAWGM 164
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G++ + NL+ P LG + V+L TL G +L+ + P+ S++ + ++ +
Sbjct: 165 IGTLIGLVLMLQNLND-PSSLGPNMAVALLTTLYGSLLANLVFIPMASKLALSTEEEVFI 223
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLS 268
IV + +I +G P++ E LP
Sbjct: 224 KQIVIEGVIGVQSGQNPKILQEKLSAFLPNH 254
>gi|322383006|ref|ZP_08056836.1| MotP-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321153029|gb|EFX45489.1| MotP-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 230
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 93/236 (39%), Gaps = 22/236 (9%)
Query: 34 IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGS 93
++IV G +G V++ P V+K +L F + + + + ++
Sbjct: 1 MLIVFGGTIGAVVVSFPGSVLKKIPKALGIAFKPANTNP---IETIDDIVDMATIARREG 57
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
E F+ D + M++V +++ E+D
Sbjct: 58 VLALEQR-----------------AQEHPNEFLRDGL-MMVVDGTDPELTRQILELEMDS 99
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGI 213
I + G P +GI+G ++G+I +GNL + P LG AI V+ T TL G+
Sbjct: 100 IEQQNEGMTKMFESAGGYSPTMGIIGTVMGLIHVLGNL-EDPSALGPAIAVAFTATLYGV 158
Query: 214 ILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + + P+ ++I+ +Q ++ + ++A G PQ+ + L E
Sbjct: 159 MAANVIYLPIGNKIRIRSKEQISQMELMLEGILALQAGENPQLIKKKLTSFLNEKE 214
>gi|228987762|ref|ZP_04147873.1| hypothetical protein bthur0001_44310 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228772036|gb|EEM20491.1| hypothetical protein bthur0001_44310 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 266
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLILGFVAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGSLSATERKKLEKGAEK 263
>gi|134094540|ref|YP_001099615.1| chemotaxis motA protein [Herminiimonas arsenicoxydans]
Length = 226
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 22/247 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG L+QP +IV +G ++ + + + +F D Y +
Sbjct: 1 MLEGGKLGSLVQPAAFIIVIVGTIGAVLLQSGWRNFANGLKMAGRVF---VPQDDNYASL 57
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ + ++ E I D + F+ +R+I+ G
Sbjct: 58 MHDVTNWSTVARREGLLSLERMIKDVND-----------------PFVAHGLRLIVDG-V 99
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+++ ++D EI ++ G P IGI+GA+LG+I M NLS P L
Sbjct: 100 DPHKLREVLDMEIGAYETQQRLSIKIWEAAGGYAPTIGILGAVLGLIHVMENLSD-PSRL 158
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G+ I V+ T+ G+ + + P++S++K+ + + ++ A G P++
Sbjct: 159 GSGIAVAFVATIYGVGFANLVFLPISSKLKAIVNRDVFRHEMLADAFAGIAAGDNPRLIE 218
Query: 259 EYGRKVL 265
E L
Sbjct: 219 ERMNIYL 225
>gi|332704091|ref|ZP_08424179.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332554240|gb|EGJ51284.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 250
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 103/255 (40%), Gaps = 24/255 (9%)
Query: 16 GGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
G AMG I I IV G + ++ P V+ S ++ F K+ ++
Sbjct: 17 VGAIAMGSGLGGFIDLPSIAIVGGGTMASTLVMFPWNVVLGSIKVGMKAFTAKSPDEE-- 74
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
+++ + L ++ E D F+ +R++
Sbjct: 75 -QLIQQIIKLADTGRREGLLALEKAQVD-------------------NDFLRRGVRLVAD 114
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
G + + +M+ EID + + MG PA G++G ++G+++ + N++ P
Sbjct: 115 G-SAPNLVRAVMETEIDFMKQRHRRGQSVFKGMGAMAPAFGMIGTLVGLVQMLQNMAD-P 172
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+G+A+ V+L T G + S + P+ +++ ++ I+ ++A NG P+
Sbjct: 173 SSIGSAMAVALLTTFYGAVASNVIFLPMAKKLEERSNEEAFYMAIIVDGVMAIQNGENPR 232
Query: 256 VAIEYGRKVLPLSER 270
V E + L S R
Sbjct: 233 VVQERLQAFLAPSMR 247
>gi|148269400|ref|YP_001243860.1| MotA/TolQ/ExbB proton channel [Thermotoga petrophila RKU-1]
gi|170288057|ref|YP_001738295.1| MotA/TolQ/ExbB proton channel [Thermotoga sp. RQ2]
gi|281411903|ref|YP_003345982.1| MotA/TolQ/ExbB proton channel [Thermotoga naphthophila RKU-10]
gi|147734944|gb|ABQ46284.1| MotA/TolQ/ExbB proton channel [Thermotoga petrophila RKU-1]
gi|170175560|gb|ACB08612.1| MotA/TolQ/ExbB proton channel [Thermotoga sp. RQ2]
gi|281373006|gb|ADA66568.1| MotA/TolQ/ExbB proton channel [Thermotoga naphthophila RKU-10]
Length = 262
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 120/280 (42%), Gaps = 22/280 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + I + G GG+ I + I + ++A+P +
Sbjct: 3 LATLMGLVLVIAALFIGILTGGGDFAAFINIPSLFITVVGSIAATMVAHPKD---KAFKI 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + + +++ + ++ E +++ +
Sbjct: 60 VNIMLSTLKEPKLDHVSLIQTMVSFSEKARREGLLSLEENLESIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G + N+M+ E+++ E + G PA G++G
Sbjct: 106 ---PFMKKALQLVVDGT-DPDLLRNMMETEMELFEEELDGERAVLESAGAYAPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + +L+ +P+ LG ++ V+L TL G +L+ + P+ +IK R +
Sbjct: 162 LIGLIQMLKSLN-NPETLGPSMAVALITTLYGAVLANGVFLPMAEKIKKRRDILVLEKRM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ +A+++ G P++ E + LP ER + E +QE
Sbjct: 221 ILEAVLSIQAGENPRILEEKLKSFLPEKERQAYEAASQEA 260
>gi|46578467|ref|YP_009275.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|46447878|gb|AAS94534.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|311232395|gb|ADP85249.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 252
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 105/270 (38%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL ++ I G+P + ++IV G +G ++ P+
Sbjct: 3 LATLIGLAVSFGLIALALLLG-GDPLLFADLPALLIVLGGTIGATLVNYPIDEALRMLAI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
F + +VL L ++ E +
Sbjct: 62 ARHAFKGHQTSSE---EVLNQFLDLSNRARREGLLALEPAV-----------------RT 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++ + G IE+++ E++ + + MG PA+G++G
Sbjct: 102 LPDPFMRKGLQLTVDG-LEPEAIEDILRCEMENMETRHESGAAIFAAMGTYAPALGLIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + ++ P +G A+ V+L T G +L+ + PL +++ ++ +L +
Sbjct: 161 VIGLVQMLKRMND-PSTIGPAMSVALITTFYGAVLANLVFLPLVGKLRHRSRQEIQLMEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++A G P++ E +ER
Sbjct: 220 QLAGILAIARGENPRIIREKLVSFQTPAER 249
>gi|42521781|ref|NP_967161.1| chemotaxis motA protein [Bdellovibrio bacteriovorus HD100]
gi|39574311|emb|CAE77815.1| chemotaxis motA protein [Bdellovibrio bacteriovorus HD100]
Length = 262
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 58/272 (21%), Positives = 106/272 (38%), Gaps = 28/272 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T IG+ + + I+ G GG+ L+Q +IV +G ++++ K +K
Sbjct: 16 ATWIGILVGVGGILLGNLLEGGHTSSLMQLTAFIIVLTGTIGAVMVSSSEKDLKTGLQLA 75
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETE---NHIDDPYNSTIFTSIPTVLE 118
+ F ++ L + KK + E N I+DP + +
Sbjct: 76 KKAFRHEESRSKVR---LNEIVDCARLAKKENILALEPRLNRIEDPLLKGVLRN------ 126
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+V I ++ + +I E L + G P IGI+
Sbjct: 127 ---------------VVDGVDITTIRDIFETQIHTEEEELLGGAKIWTDAGGFAPTIGII 171
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
GA+LG+I MGNL+ + LG I V+ T+ G+ + L PL +++K R
Sbjct: 172 GAVLGLIHVMGNLTDT-SKLGAGIAVAFVATVYGVSSANLLFLPLGNKLKRRVQALTREK 230
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++V + + +G P V + L ++
Sbjct: 231 MMVLEGGLLIASGMNPVVLEQKLYAYLDSDQK 262
>gi|229117998|ref|ZP_04247358.1| hypothetical protein bcere0017_42680 [Bacillus cereus Rock1-3]
gi|228665447|gb|EEL20929.1| hypothetical protein bcere0017_42680 [Bacillus cereus Rock1-3]
Length = 264
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATIIGLILGFVAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IDKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +EI A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEIGAEK 261
>gi|229175220|ref|ZP_04302736.1| hypothetical protein bcere0006_43010 [Bacillus cereus MM3]
gi|228608356|gb|EEK65662.1| hypothetical protein bcere0006_43010 [Bacillus cereus MM3]
Length = 266
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLILGFVAVVVGMVVKGADVNSLLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAELEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|90406797|ref|ZP_01214989.1| flagellar motor protein [Psychromonas sp. CNPT3]
gi|90312034|gb|EAS40127.1| flagellar motor protein [Psychromonas sp. CNPT3]
Length = 250
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 98/262 (37%), Gaps = 22/262 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+ G F+ I ++ G + L +IV G G ++ + K + + L +
Sbjct: 6 LFGFFVIIASLLFSQIYHGVSISGLFDLPAFLIVFGGTCGAVLVQSSAKQLTHALRLLPQ 65
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F L +++ +K E + N L
Sbjct: 66 VFFSPPLPLHKQSLLIQ---KWSDKSRKLGLLSLEPN-----------------ANESLD 105
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F + M++ G ++ ++ ++ID+ + MG P IGI+GA++G
Sbjct: 106 EFTSKALSMLVDG-CEPLVLQEILQQDIDLESEHYERSAQIYESMGGYSPTIGIIGAVMG 164
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I+AMG LS+ P LG I V+ T+ G+ + + P+ ++I+ +
Sbjct: 165 LIQAMGYLSE-PDKLGAGIAVAFVATIYGVGFANFIFLPIANKIRLYYQYIALYKEMTLI 223
Query: 244 ALIAYMNGAIPQVAIEYGRKVL 265
L+A +G + L
Sbjct: 224 GLLAIAHGENSLLLERRLSGYL 245
>gi|229158120|ref|ZP_04286189.1| hypothetical protein bcere0010_42980 [Bacillus cereus ATCC 4342]
gi|228625349|gb|EEK82107.1| hypothetical protein bcere0010_42980 [Bacillus cereus ATCC 4342]
Length = 266
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLILGFVAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|242280811|ref|YP_002992940.1| cyclic nucleotide-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242123705|gb|ACS81401.1| cyclic nucleotide-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 251
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ +I MGGN I P IV+V G + P+ V+ +
Sbjct: 3 IATLIGIVGGFG-LIAATIVMGGNAAGFIDPPSIVVVFGGTFASCFIMFPMGVVLKAFKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
L+ F K+ D + L +K S E IDD
Sbjct: 62 ALKGFFAKSEDPKIMID---QIVALAETARKESLVALEKVAIDD---------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
++ + ++ G + ++M+ EID + + + MG PA G++G
Sbjct: 103 ----EYLKKGVILVADGTDGDL-VRSIMEFEIDAMKKRHFQGQAVMKGMGAMAPAFGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + NLS P +G A+ V+L TL G IL+ + PL +++ +++
Sbjct: 158 TLIGLVQMLSNLSD-PDAIGPAMAVALLTTLYGSILANVIFLPLAKKLEERSIEEASYME 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + ++A G P + E + L R
Sbjct: 217 IMVEGVVAIQKGEHPSIVKEKLQAFLSPGLR 247
>gi|74055056|gb|AAZ95861.1| PomA [Aeromonas hydrophila]
Length = 245
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 96/262 (36%), Gaps = 22/262 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+ GL + + I GG L+ VIV G G ++ P K + ++ L
Sbjct: 3 MFGLILALGAIAIAQLWHGGTLLTLLDGPAFVIVVGGTWGAVILQTPRKYLLEAIRQLRW 62
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ + L+ ++ EN + E
Sbjct: 63 MLLPPGWDLVNQAERLQ---AWAVFARQQGLLALENQ-----------------ADQESD 102
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F + MI+ G + +I L++ +IDI MG P IGI+GA++G
Sbjct: 103 EFTRQGLTMIVDGVSID-DIRMLLEADIDIEQERNEHSARVFEAMGGYSPTIGIIGAVMG 161
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I+AM +L + P LG I V+ T+ G+ + P+ +++++ + +
Sbjct: 162 LIQAMFHL-EDPAALGAGIAVAFVATIYGVGFANLFYLPIANRLRAFHYHYALFQEMTLE 220
Query: 244 ALIAYMNGAIPQVAIEYGRKVL 265
L+A +G + L
Sbjct: 221 GLMAIAHGENGPQVERRLKAYL 242
>gi|42528266|ref|NP_973364.1| motility protein A [Treponema denticola ATCC 35405]
gi|4426945|gb|AAD20619.1| flagellar motor protein MotA [Treponema denticola]
gi|41819536|gb|AAS13283.1| motility protein A [Treponema denticola ATCC 35405]
gi|325474544|gb|EGC77730.1| flagellar motor protein MotA [Treponema denticola F0402]
Length = 259
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 103/275 (37%), Gaps = 23/275 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++ IG+F I + G GG+ LI P + I G + PL
Sbjct: 3 IASFIGIFGGIAVVAFGAIL-GGSAGGLIHPASMFITIGGSYMCLFLTYPLSYTIGIFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F G+ +++ L ++ E I+D +
Sbjct: 62 VARVFKVTDYGEKA---LVQRFVALSEKSRRAGLLALEEEIEDFED-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +R ++ G I +LM+ E++ + ++ P G++G
Sbjct: 105 ---PFMRSGLRNVVDG-IDGEAIRSLMENELNQMEERHNTWISLVNAWATLAPGFGMLGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL LG + +L T G ++ L P+ +++ + + +
Sbjct: 161 VIGLIGMLLNLDDK-TALGPNMATALVTTFYGSLMQNWLLVPIATKLMYQNNMEVKSKEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++ G P++ + L S+R +IE
Sbjct: 220 IIEGVLGIQAGDNPRILAQRLITYLTPSDRKAIEA 254
>gi|24375769|ref|NP_719812.1| chemotaxis motA protein [Shewanella oneidensis MR-1]
gi|24350714|gb|AAN57256.1|AE015861_8 chemotaxis motA protein [Shewanella oneidensis MR-1]
Length = 244
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 22/253 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+ IG+ + ++ I+ G GG+P L+ +IV G +G V P VI S
Sbjct: 2 SFIGVIVALVFILVGNLIEGGHPSALLDLPAFMIVIGGTIGATVAQFPFSVIIASMKRFK 61
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + + + L + +++KG E+ ID +
Sbjct: 62 WLIF---PLRTDLNERAEFLIEIAGDVRKGGLLSIEDKIDQIDD---------------- 102
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ + +++ G + +E ++++EI+ + + MG P +GIVGA+
Sbjct: 103 -PFLHKGLELLVDGYEKDNIVE-ILEKEIEFEQHGIEQTVKVYEAMGGYCPTMGIVGAVF 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I AMG L +P LG AI V+ T+ G+ + + P ++ K+ + +
Sbjct: 161 GLIHAMG-LLDAPDKLGGAIAVAFIATIYGVAAANIIFLPFGNRYKAFAHQLSLFKEMTL 219
Query: 243 KALIAYMNGAIPQ 255
+ +G PQ
Sbjct: 220 TGITGIADGESPQ 232
>gi|88812419|ref|ZP_01127669.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
gi|88790426|gb|EAR21543.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
Length = 254
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 119/277 (42%), Gaps = 25/277 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG + +I +GG+P I + ++IV L ++ PL + +
Sbjct: 3 LATLIGFIGALG-VIAAAIFIGGSPAIFLNLPSMLIVLAGTLLAVLIKFPLGQFLGAFKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
F Y++ D L +K E +
Sbjct: 62 AGRAFRYRSESPQGLID---QTVELAQVARKEGLLALEGY-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F +++I G+ S ++ ++ +EID+ + + +G+ PA+G++G
Sbjct: 100 VANPFFRQGIQLIADGH-ESELVKKVLGQEIDLTMARDEQGEQVFRAIGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N++ PK +G A+ V+L TL G +L+ S+ P+ ++ + ++ +
Sbjct: 159 LIGLVQMLSNMAD-PKQIGPAMAVALLTTLYGAVLANSVAIPIADKLANRNGEERLNRTL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ + L++ G P+V E + LP+ +R E A
Sbjct: 218 ILEGLLSIQEGLNPRVIGELLKTYLPVKQRAPAEEAA 254
>gi|88799580|ref|ZP_01115156.1| Flagellar motor component [Reinekea sp. MED297]
gi|88777665|gb|EAR08864.1| Flagellar motor component [Reinekea sp. MED297]
Length = 250
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ + II GG+ I I I+IV G + L+ G
Sbjct: 3 IATIVGIIGAVGMIIMSMLL-GGSLGIFINIPSILIVFGGSTFVALSKFTLEQFLGVGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F + + + D++ + L +KG E
Sbjct: 62 VGKAFSFSMVKPE---DLITEIVELADGARKGGLLSLEG-------------------KE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ +++++ G+ ++ L+++++ + +GE PA+G++G
Sbjct: 100 TSSDFLSKGIQLLVDGH-DPDVVKALLNKDMRMTSDRHRDGKSFFDALGEVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G L+ + P+ ++ + ++ + +
Sbjct: 159 LIGLVGMLANMDD-PKTIGPAMAVALLTTLYGSFLATVIAIPIGDKLNNRAKQEEMVQKM 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
L+A G P++ + LP + R
Sbjct: 218 CIDGLLAIQAGQNPRIIESMLKSYLPSNLR 247
>gi|120603949|ref|YP_968349.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|120564178|gb|ABM29922.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
Length = 252
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 105/270 (38%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL ++ I G+P + ++IV G +G ++ P+
Sbjct: 3 LATLIGLAVSFGLIALALLLG-GDPLLFADLPALLIVLGGTIGATLVNYPIDEALRMLAI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
F + +VL L ++ E +
Sbjct: 62 ARHAFKGHQTSSE---EVLNQFLDLSNRARREGLLALEPAV-----------------RT 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++ + G IE+++ E++ + + MG PA+G++G
Sbjct: 102 LPDPFMRKGLQLTVDG-LEPEAIEDILRCEMENMETRHESGAAIFAAMGAYAPALGLIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + ++ P +G A+ V+L T G +L+ + PL +++ ++ +L +
Sbjct: 161 VIGLVQMLKRMND-PSTIGPAMSVALITTFYGAVLANLVFLPLVGKLRHRSRQEIQLMEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++A G P++ E +ER
Sbjct: 220 QLAGILAIARGENPRIIREKLVSFQTPAER 249
>gi|332703400|ref|ZP_08423488.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332553549|gb|EGJ50593.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 251
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 109/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ GL I + + GG MGG+ ++ I I+IV G L +A P + ++ + +
Sbjct: 3 IATLGGLIIGLTMV-GGAIYMGGDSFLFINLPSILIVIGGTLAAICVAFPFEEVRQAIAA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + + D++ + + ++ EN + + ++ +N
Sbjct: 62 GFKAFASRKVRPQEVVDIMIRVADI---SRREGLVALENI---QTENKVLKKACQLIADN 115
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
I D +R+ EI + + PA G++G
Sbjct: 116 ADPDIIRDTLRI-----------------EISSMKRRHRIGQEVFRKLAGFAPAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + L PK +G A+ V++ T G +L+ + P+ ++ + L++ I
Sbjct: 159 LIGLVQMLARLDD-PKAIGPAMAVAIITTFYGSVLANLIFLPIAGKLNARTLQETLHMEI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + + + P++ E + ER
Sbjct: 218 IFEGAKSILENNNPRLVYEKLSSFIAPQER 247
>gi|225375332|ref|ZP_03752553.1| hypothetical protein ROSEINA2194_00957 [Roseburia inulinivorans DSM
16841]
gi|225212821|gb|EEG95175.1| hypothetical protein ROSEINA2194_00957 [Roseburia inulinivorans DSM
16841]
Length = 266
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 52/282 (18%), Positives = 113/282 (40%), Gaps = 24/282 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
++++ G+ + + + G ++ GG ++ I+I G + G + A+ L +
Sbjct: 3 IASLAGIILGAVMFVFGVFSNGGFEALKNMVDSASIIITVGGSISGVLAAHKLPDFINGL 62
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F KA + + +K + L +K E +D +
Sbjct: 63 KGITLTFKEKA---EDPAETIKKIIDLSNVARKEGLLALEEAANDIED------------ 107
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ + M++V + +M+ + + K E PA G++
Sbjct: 108 -----DFMKKGV-MLVVDGTDPELVRGIMETSLSCMEERHKKVIAFWEKWAELGPAWGMI 161
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+I + NL + +G A+ V+L TL G +++ LCNP S++K ++ +
Sbjct: 162 GTLIGLINMLKNL-EDASSIGPAMSVALVTTLYGSLIANWLCNPTASKLKVNNEREVAIK 220
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ + L++ G P+V E + L S+ +
Sbjct: 221 EMIVEGLLSIQAGENPRVIEEKLKSFLTPQAAGSLGEGDEAA 262
>gi|330828821|ref|YP_004391773.1| MotA/TolQ/ExbB proton channel [Aeromonas veronii B565]
gi|328803957|gb|AEB49156.1| MotA/TolQ/ExbB proton channel [Aeromonas veronii B565]
Length = 245
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 22/247 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG+ L+ +IV G +G + P K I + LL IF T +
Sbjct: 18 LWHGGSLLTLVDGPAFLIVLGGTVGAVTLQTPAKYILLALRQLLWIFTPPHQDLATQAER 77
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
L+ ++ EN + +E F + MI+ G
Sbjct: 78 LQ---SWAVFARQQGLLALENQAE-----------------HEEDNFTRQGLGMIVDG-V 116
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+ +I L++ +IDI MG P IGI+GA+LG+I+AM +L + P L
Sbjct: 117 STEDIRMLLEADIDIEQERNEHAARVFEAMGGYSPTIGIIGAVLGLIQAMFHL-EDPSAL 175
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I V+ T+ G+ + + P+ +++++ + + L+A +G
Sbjct: 176 GAGIAVAFVATIYGVGFANLIYLPIANRLRAFHYHYALFQEMTLEGLLAIAHGENGLQVE 235
Query: 259 EYGRKVL 265
R L
Sbjct: 236 RRLRAYL 242
>gi|229098969|ref|ZP_04229904.1| hypothetical protein bcere0020_41930 [Bacillus cereus Rock3-29]
gi|229105136|ref|ZP_04235787.1| hypothetical protein bcere0019_42700 [Bacillus cereus Rock3-28]
gi|228678317|gb|EEL32543.1| hypothetical protein bcere0019_42700 [Bacillus cereus Rock3-28]
gi|228684467|gb|EEL38410.1| hypothetical protein bcere0020_41930 [Bacillus cereus Rock3-29]
Length = 266
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIGL + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGLILGFVAVVVGMVVKGADVTALLNPAAALIIFIGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IDKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAEIEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +EI A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEIGAEK 263
>gi|254517029|ref|ZP_05129087.1| flagellar motor component [gamma proteobacterium NOR5-3]
gi|219674534|gb|EED30902.1| flagellar motor component [gamma proteobacterium NOR5-3]
Length = 251
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 118/275 (42%), Gaps = 27/275 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ I ++ GG+ + I I+IV G + ++ + +
Sbjct: 3 LATLLGMVGAIGIVLAA-ILTGGSALVFINVPSILIVLGGTVMVVMIKFSMGQFFGAFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH-IDDPYNSTIFTSIPTVLEN 119
L F K + ++++ + L +K EN ID+
Sbjct: 62 ALTAFINKTSDPE---ELIEKIVELANIARKEGMLALENQEIDN---------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + ++M+I GN+R + ++ +++ + S + PA+G++G
Sbjct: 103 ----DFLDEGVKMLIDGNSRE-VVNTVLSKDMQQTIERHTWGAKVFSATADVAPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + N+S PK +G A+ V+L TL G +L+ + P+ ++ + + R+
Sbjct: 158 TLIGLVQMLSNMSD-PKSIGPAMAVALLTTLYGAMLANMIAMPIADKLTLRKADELRVRS 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ ++A G P++ + L +R S +
Sbjct: 217 MCIDGVLAIQEGQNPRIIESMLKAYLEPDKRGSED 251
>gi|302670730|ref|YP_003830690.1| flagellar motor protein MotA [Butyrivibrio proteoclasticus B316]
gi|302395203|gb|ADL34108.1| flagellar motor protein MotA [Butyrivibrio proteoclasticus B316]
Length = 267
Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 109/277 (39%), Gaps = 24/277 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYI--LIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
+++++G+ + + +I G + + +I G L + + + +
Sbjct: 3 IASLLGVGLCFVFMILSIVFSAGIAGVQYFLDAPSAMITFGGALMAVLASRSMPSFINGL 62
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
S I+ A D +K + L +K E
Sbjct: 63 KSYTLIYKMPA---DDTKGTIKQIIDLSNTARKEGLLALEEA-----------------A 102
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N F+ + +I+ G ++++++ EID + Y + P+ G++
Sbjct: 103 GNLEDAFMKKGVGLIVDGT-EPELVKSILEAEIDAMSERHKSNYSFFGDLAGMGPSWGMI 161
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G +LG++ + N+S P +G ++ V+L T G +L+ C P +++K+ ++
Sbjct: 162 GTLLGLVLMLQNMSD-PSSIGPSMAVALITTFYGSVLANWFCYPAENKLKARDNAEYMAK 220
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
IV + L++ G P+V E + L ++R + E
Sbjct: 221 SIVIEGLLSIQAGENPRVTEEKLKSFLSPADRAAYEA 257
>gi|221210918|ref|ZP_03583898.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans CGD1]
gi|221169874|gb|EEE02341.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans CGD1]
Length = 254
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 94/258 (36%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GG+ L Q VIV G LG ++ N D+
Sbjct: 3 LLTLAGVLLGGAAIVFGFTLEGGHLATLFQLEAFVIVLGGTLGAVMIQNTWARFVDAVKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + L L K E+ ++
Sbjct: 63 LRLAFVRATAADRKH---LSDLLEWGDRAKLEGLLAFES-----------------MDVT 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + IE+ + E+D L G P GI+G+
Sbjct: 103 GIHPFARRGLELLANGMSTA-VIEDALQRELDAYERSHLAAARVWQQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+++ G++ + P LG I V+ TL G+ + + PL ++++ + R +
Sbjct: 162 VLGLVQVTGHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAHVDSELRFRKL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|94500547|ref|ZP_01307078.1| flagellar motor protein [Oceanobacter sp. RED65]
gi|94427337|gb|EAT12316.1| flagellar motor protein [Oceanobacter sp. RED65]
Length = 252
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + I GG+P + ++IV G L +M L +G
Sbjct: 3 LATLVGLIGCWVIIAVAMVL-GGDPAMFFNVPSLLIVVGGALFAVLMKFELGQFLAAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D D + L +K E
Sbjct: 62 AGKAFSFKLPKPDAMIDEI---VELAGEARKNGLLALEG-------------------KE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G+ ++ L+ +++ + + +G+ PA+G++G
Sbjct: 100 VSYDFLAKGIQLLVDGH-DPEVVKTLLSKDMRLAADRHNTGSAIFTQIGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +L+ L P+ + K ++ RL +
Sbjct: 159 LIGLVAMLANMDD-PKAIGPAMAVALLTTLYGAMLANMLALPIADKCKLRAAEEGRLQAM 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V AL+A G P+V R LP S+R
Sbjct: 218 VLDALLAIQAGQNPRVIDSILRTYLPESKR 247
>gi|77918776|ref|YP_356591.1| proton conductor component of motor [Pelobacter carbinolicus DSM
2380]
gi|77544859|gb|ABA88421.1| proton conductor component of motor; no effect on switching
[Pelobacter carbinolicus DSM 2380]
Length = 257
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 112/274 (40%), Gaps = 29/274 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
STI G+ L +I + GG + I P +IV G +G ++ K + + +
Sbjct: 4 STIAGIAAAFLLMILA-ISSGGGITLFIDPPSAMIVIGGTIGTTLVHYTFKDMMGTVAII 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETE---NHIDDPYNSTIFTSIPTVLE 118
+ F + D + + +K + +DDP
Sbjct: 63 KKAFFAQRFSS---TDRIAQIIDYAGKARKEGILSLQSVTKEVDDP-------------- 105
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F ++M + G +++ ++D EI+ + + + MG PA+G++
Sbjct: 106 ------FFLKGLQMAVDGQ-EPDKLKEMLDSEIEYLEERHDRGSEIMVAMGTYAPAMGMI 158
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+++ + ++ P +G A+ V+L T G +++ +C P++ ++K+ +
Sbjct: 159 GTLIGLVQMLQTMND-PSSIGPAMAVALLTTFYGAVIANIICMPMSGKLKNRSSDEVLDK 217
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
++ + + + + G P+V + +R S
Sbjct: 218 TLIAEGMRSILEGENPRVLEHRLHAFVAPKDRQS 251
>gi|88704265|ref|ZP_01101979.1| Chemotaxis pomA protein [Congregibacter litoralis KT71]
gi|88701316|gb|EAQ98421.1| Chemotaxis pomA protein [Congregibacter litoralis KT71]
Length = 252
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 117/271 (43%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ I ++ GG+ + I I+IV G + ++ + +
Sbjct: 3 LATLLGMVGAIGIVLAA-ILTGGSALVFINVPSILIVLGGTVMVVMIKFSMGQFFGAFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH-IDDPYNSTIFTSIPTVLEN 119
L F K+ + ++++ + L +K EN ID+
Sbjct: 62 ALTAFINKSSDPE---ELIEKIVELANIARKEGMLALENQEIDN---------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + ++M+I GN+R + ++ +++ + S + PA+G++G
Sbjct: 103 ----DFLDEGVKMLIDGNSRE-VVSTVLSKDMQQTIERHSWGAKVFSATADVAPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + N+S PK +G A+ V+L TL G +L+ + P+ ++ + + R+
Sbjct: 158 TLIGLVQMLSNMSD-PKSIGPAMAVALLTTLYGAMLANMVAMPIADKLTLRKADELRVRS 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A G P++ + L +R
Sbjct: 217 MCIDGVLAIQEGQNPRIIESMLKAYLEPDKR 247
>gi|83648503|ref|YP_436938.1| flagellar motor protein PomA [Hahella chejuensis KCTC 2396]
gi|83636546|gb|ABC32513.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 252
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 119/275 (43%), Gaps = 25/275 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + + GG+ + + ++IV G L +M L +G
Sbjct: 3 LATLLGLIGGLAIVTMAMML-GGSIGMFVDVPSLLIVFGGTLLVVLMKFSLGQFLSAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + ++++ + L +KG E
Sbjct: 62 AAKAFMFKLDKPE---ELIEQVVELADAARKGGLLSLEG-------------------KE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++++I G+ ++ L+ ++ ++ + + MG+ PA+G++G
Sbjct: 100 IPNAFLSKGIQLLIDGHDGD-VVKALLTKDRNLTVDRHKQGSSVFGAMGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +L+ + P+ ++K ++ ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAMLANMIAIPVADKLKLRMGEEEQIKSM 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ AL+A G P+V R LP +R + E
Sbjct: 218 IIDALLAIQAGQNPRVIETMLRTYLPEGKRQTEEA 252
>gi|307718608|ref|YP_003874140.1| chemotaxis protein MotA [Spirochaeta thermophila DSM 6192]
gi|306532333|gb|ADN01867.1| chemotaxis protein MotA [Spirochaeta thermophila DSM 6192]
Length = 262
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 99/267 (37%), Gaps = 25/267 (9%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
I G G + + ++IV G G ++ NPL + +
Sbjct: 17 IFGIVVAGVPLGVYVDIASVLIVFGGSFGAMLVGNPLARMLGIMQYVSHALNVPNW---Q 73
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
V+ L ++ E+++D+ + F+ +++++
Sbjct: 74 EGRVINDLVAYAERARREGLLALEDNLDEIED-----------------EFMRKGLQLVV 116
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-SQ 193
G I+ ++ E++ + + PA G++G ++G+I + NL
Sbjct: 117 DG-IDPEIIKTVLYTELNEMQSRHEVGAKIFDDWSKIAPAFGMIGTLIGLIAMLKNLAGG 175
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+G + +L TL G + + PL +++ + + I+ + +++ G
Sbjct: 176 DTSAIGQGMATALITTLYGSLFANLFLIPLKNKLMDRDRDETLVREIMIEGILSIQAGDN 235
Query: 254 PQVAIEYGRKVLPLSERPSIEIVAQEV 280
P+V +E LP ER E V QEV
Sbjct: 236 PRVLLEKLLSFLPPKER---EAVRQEV 259
>gi|315186379|gb|EFU20139.1| MotA/TolQ/ExbB proton channel [Spirochaeta thermophila DSM 6578]
Length = 262
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 25/266 (9%)
Query: 16 GGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
G G + + ++IV G G ++ NPL I +
Sbjct: 18 FGIVVAGVPLGVYMDIASVLIVFGGSFGAMLVGNPLARILGIMQYVSHALNVPNW---QE 74
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
V+ L ++ E+++D+ + F+ +++++
Sbjct: 75 GRVINDLVAYAERARREGLLALEDNLDEIED-----------------EFMRKGLQLVVD 117
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-SQS 194
G I+ ++ E++ + + PA G++G ++G+I + NL
Sbjct: 118 G-IDPEIIKTVLYTELNEMQSRHEVGAKVFDDWSKIAPAFGMIGTLIGLIAMLKNLAGGD 176
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+G + +L TL G + + PL +++ + + I+ + +++ G P
Sbjct: 177 TSAIGQGMATALITTLYGSLFANLFLIPLKNKLMDRDRDETLVREIMIEGILSIQAGDNP 236
Query: 255 QVAIEYGRKVLPLSERPSIEIVAQEV 280
+V +E LP ER E V QEV
Sbjct: 237 RVLLEKLLSFLPPKER---EAVRQEV 259
>gi|291538505|emb|CBL11616.1| Flagellar motor component [Roseburia intestinalis XB6B4]
Length = 256
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 102/273 (37%), Gaps = 24/273 (8%)
Query: 7 LFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
+ + ++ + G + GG + + + +I G + G + + L + S+ I
Sbjct: 1 MLLGVVMFVFGVLSNGGVASLHSMWDTASFIITIGGSIAGTLASFKLADFINGIKSIKLI 60
Query: 65 FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
F + V+ + L +K E N
Sbjct: 61 FKDEVQDPAV---VINQIISLSNTARKEGLLALEEA-----------------ANGIEDD 100
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + M++V + +M+ ++ + E PA G++G ++G+
Sbjct: 101 FLKKGI-MLVVDGTDPELVRGIMETDLACVESRHKAKIAVWEKWAELGPAWGMIGTLIGL 159
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I + N+ + +G A+ +L TL G +L+ LCNP+ ++K + + I +
Sbjct: 160 ILMLKNM-EDASTIGPAMATALVTTLYGSLLANWLCNPIAGKLKLNNDNEMMMKEISVEG 218
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+++ G P+V E + L S R + +
Sbjct: 219 ILSIQAGENPRVIEEKLKSFLAPSARNTAQESE 251
>gi|77359763|ref|YP_339338.1| chemotaxis motA protein [Pseudoalteromonas haloplanktis TAC125]
gi|76874674|emb|CAI85895.1| putative Chemotaxis motA protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 254
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 102/263 (38%), Gaps = 22/263 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++GL I + I G+ GG L ++IV G LG ++ K
Sbjct: 4 LSVLGLLIGLGAIAIGYSLEGGVVSALFNGPALIIVLGGTLGAVMLQTSASTFKKMLEIT 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + D ++ + + ++ EN
Sbjct: 64 HWVFVSPKYNIE---DAIEQVKGWSHKARQEGYLALENE-----------------ALTH 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
T+ + +++ G + ++ + ++ ++ + L+ MG P IGI+GA+
Sbjct: 104 PDTYAAKGLGLLVDGCSD-QKLRDTLEIDLLLERERLLEASRVYEAMGGYSPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+AM ++ P+ LG + + T+ G+ L+ L P+ +++K ++ + ++
Sbjct: 163 LGLIQAMSFITD-PQKLGAGVATAFIATIYGVGLANLLFLPMANKLKQRVEQKMLYHEML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKV 264
+ +IA G P
Sbjct: 222 AEGVIAISQGESPVSIELKLEAY 244
>gi|311992346|gb|ADQ26746.1| flagellar stator protein [Aeromonas hydrophila]
Length = 242
Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 22/261 (8%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
GL + + I GGN L+ VIV G G ++ P K + ++ +
Sbjct: 1 FGLILALGAIAIAQLWHGGNLLTLLDGPAFVIVVGGTWGAVILQTPRKFLLEAIRQTRWM 60
Query: 65 FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
A + L+ ++ EN + E
Sbjct: 61 LLPPAWDLVAQAERLQ---AWAVFARQQGLLALENQ-----------------ADQESDE 100
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F + MI+ G + +I L++ +IDI MG P IGI+GA++G+
Sbjct: 101 FTRQGLTMIVDGVSID-DIRMLLEADIDIEQERNEHSARVFEAMGGYSPTIGIIGAVIGL 159
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
I+AM +L + P LG I V+ T+ G+ + L P+ +++++ + +
Sbjct: 160 IQAMFHLEE-PASLGAGIAVAFVATIYGVGFANLLYLPIANRLRAFHYHYALFQEMTLEG 218
Query: 245 LIAYMNGAIPQVAIEYGRKVL 265
L+A +G + L
Sbjct: 219 LMAIAHGENGPQVERRLKAYL 239
>gi|161521535|ref|YP_001584962.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189352296|ref|YP_001947923.1| chemotaxis MotA protein [Burkholderia multivorans ATCC 17616]
gi|160345585|gb|ABX18670.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189336318|dbj|BAG45387.1| chemotaxis MotA protein [Burkholderia multivorans ATCC 17616]
Length = 254
Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 94/258 (36%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GG+ L Q VIV G LG ++ N D+
Sbjct: 3 LLTLAGVLLGGAAIVFGFTLEGGHLATLFQLEAFVIVLGGTLGAVMIQNTWARFVDAVKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + L L K E+ ++
Sbjct: 63 LRLAFVRATAADRKH---LSDLLEWGDRAKLEGLLAFES-----------------MDVT 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + IE+ + E+D L G P GI+G+
Sbjct: 103 GIHPFARRGLELLANGMSTA-VIEDALQRELDAYERSHLAAARVWQQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+++ G++ + P LG I V+ TL G+ + + PL ++++ + R +
Sbjct: 162 VLGLVQVTGHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAHVDSELRFRKL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|258404711|ref|YP_003197453.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257796938|gb|ACV67875.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 261
Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 109/272 (40%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T +G+ + G G + I + +V G G ++ PL+ + ++
Sbjct: 6 LATFLGIIGAFGLM-GYAIMSGSGLEVFIDYQALFVVTGGTFGALLVHYPLRDVANAFSV 64
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
F Y+ + +V+ +L +K E N
Sbjct: 65 GKNAFLYREAAPN---EVMAMLLDYATRARKEGLLALEQA-----------------TNE 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M G + + +D EI+ I K S +G PA+G+VG
Sbjct: 105 ASDNFLAKGLQMAADGY-EPDVLRDTLDREIEYIEDRHEKGAEIFSSLGMYAPAMGMVGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + L + P +G A+ ++L TL G +++ + P++ ++K+ + +
Sbjct: 164 LIGLVQMLQTL-EDPSTIGPAMAMALLTTLYGSVMANVIFIPMSGKLKNKSKAEVLKKSL 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V + + + + G P++ + L +R S
Sbjct: 223 VLEGMKSILLGENPRIMEQKLHAFLAPKQRES 254
>gi|54308003|ref|YP_129023.1| flagellar motor protein PomA [Photobacterium profundum SS9]
gi|46912429|emb|CAG19221.1| putative sodium-driven polar flagellar protein MotA [Photobacterium
profundum SS9]
Length = 253
Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + + GG+ + ++IV G ++ + +
Sbjct: 3 LATLIGLVGSFAFVAMAMLL-GGSLGMFFDVPSVLIVLGGTSFVVLIKYSISQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K + D++ + + +KG E E
Sbjct: 62 AVKAFMFKTDNPE---DLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + K S G+ PA+G++G
Sbjct: 100 VDNSFLRKGIDLLVDGH-DADVVRATLQKDIGLTNERHEKGVGIFSSFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G IL+ + P+ ++ + ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGSILANMVAIPIADKLSLRKNEEKLNRQL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 ILDGVLAIQDGQNPRVIDGYLKNYLNEKKR 247
>gi|323697840|ref|ZP_08109752.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323457772|gb|EGB13637.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 250
Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 116/273 (42%), Gaps = 27/273 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I MGGN I +V+V G + P+ V+ ++
Sbjct: 3 IATLIGLAGAFGLVIT-TIFMGGNAAGFIDIPSVVVVIGGTFAVTFVMFPMGVVINAFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
++ +K+ D+++L+ L +K S E +I+D
Sbjct: 62 GMKTLMFKSSDPQ---DIIRLITSLADTARKESLVALEKVNIED---------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + M++V + + ++M+ E++ + + MG PA G++G
Sbjct: 103 ----QFLKKGV-MLVVDGSSEGLVRSVMEIELEFMKQRHRQGQAVFKGMGTMAPAFGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + NLS P +G A+ V+L T G I++ + P+ ++++ +
Sbjct: 158 TLIGLVNMLSNLSD-PSSIGPAMAVALLTTFYGAIMANVMFLPMATKLEERSAEDVLFMQ 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
I+ + + + G P V E + L + R +
Sbjct: 217 IMIEGVSSLQRGDHPSVVKEKLQAFLSPALREA 249
>gi|310639573|ref|YP_003944331.1| mota/tolq/exbb proton channel [Paenibacillus polymyxa SC2]
gi|309244523|gb|ADO54090.1| MotA/TolQ/ExbB proton channel [Paenibacillus polymyxa SC2]
Length = 264
Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ-PFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
++TIIGL + +L ++ G G L+ P +I+ MA P+ +K
Sbjct: 3 ITTIIGLVLGLLSLVVGMILKGAPVVNLVNNPAAYMIIFVGTAASIFMAFPMDDMKRVPK 62
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
IF + L +++ ++ E+ +++ +
Sbjct: 63 LFKIIFTQQKLL--DRKELIGTFTEWASITRREGLLALESKVEEIDD------------- 107
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ MRMII GN + + + +++ E+I+ S G P +G++G
Sbjct: 108 ----PFMRGGMRMIIDGNDQEF-VRDVLMEDINATEDRHRAGALIFSQAGMYAPTLGVLG 162
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
A++G+I A+ +LS + L AI + TLLGI Y L +P+++++K K+ L +
Sbjct: 163 AVVGLIAALADLSDM-EKLSHAIAAAFIATLLGIFTGYVLWHPMSNKLKRLSKKEVELKL 221
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++ + L++ +G + L +ER S+
Sbjct: 222 MMVEGLLSIQSGISTIAISQKLAIFLTPTERASMTQ 257
>gi|119474632|ref|ZP_01614985.1| Flagellar motor component [marine gamma proteobacterium HTCC2143]
gi|119450835|gb|EAW32068.1| Flagellar motor component [marine gamma proteobacterium HTCC2143]
Length = 252
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 115/275 (41%), Gaps = 25/275 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + II GG + ++IV + + + +G
Sbjct: 3 LATVIGVVGALAIIITSMVLSGG-IGMFTNMSAVLIVFVGSMFVVLSKFGMSQFLGAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K+ D + +L +KG E
Sbjct: 62 AAKAFFFKSTDPSAMIDEI---VVLADAARKGGLLSLEG-------------------KE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +++++ G+ ++ L+ ++ D + + + +G+ PA+G++G
Sbjct: 100 VGNDFLQGGIQLLVDGH-DPDVVKALLSKDKDKTVERHEQGASIFAALGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +L+ + P++ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAMLANMVAIPISDKLILRRGEEEMNKSL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
V AL+A +G P+V R LP S+RP +
Sbjct: 218 VIDALLAIQSGQNPRVIDSMLRNYLPASQRPQADE 252
>gi|225549157|ref|ZP_03770132.1| chemotaxis protein MotA [Borrelia burgdorferi 94a]
gi|225370383|gb|EEG99821.1| chemotaxis protein MotA [Borrelia burgdorferi 94a]
gi|312148419|gb|ADQ31078.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
JD1]
Length = 260
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + I I + ++ + +K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSIFITVVGSFSALMASSEVVAVKKIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++K+L L +K ++ ++ +
Sbjct: 63 LGFFFRRNSYAK---VSIIKILVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G+ G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + LG+++ V+L TL G I++ + P+ +++ ++ + +
Sbjct: 162 LIGLVALLGNL-EDKSALGSSMAVALITTLYGTIMANLMFTPVQLKLEKIDTEEAAVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G P++ + L +R
Sbjct: 221 IIEGVLSIQSGDNPRILEQKLMTFLTPKDR 250
>gi|117928059|ref|YP_872610.1| MotA/TolQ/ExbB proton channel [Acidothermus cellulolyticus 11B]
gi|117648522|gb|ABK52624.1| MotA/TolQ/ExbB proton channel [Acidothermus cellulolyticus 11B]
Length = 260
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 107/277 (38%), Gaps = 24/277 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
TI+G+ + I G P ++ P +++V LG + LK S +
Sbjct: 5 TIVGILLGFSGIFMSMILEGSKPTAILLPAPMMLVILGTLGAAMAGGLLKDTTGSVKWIK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
K + D D L L ++ E+ N
Sbjct: 65 TALLAKPIRPDGLVDE---LVKLADRARREGLLALEDA-----------------ANEVD 104
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ +++ I G E+ ++D EI E + MG P +GI+G ++
Sbjct: 105 DDFLRKGLQLAIDGT-DPEELREILDAEIVAKRTEYKQGAKLFLDMGGYSPTLGIIGTVV 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
+I + NLS SP+ LG I + TL G++L+ + PL+++I + +V
Sbjct: 164 SLIHVLANLS-SPESLGKLIASAFVATLWGVMLANIVWLPLSNKIGRLGELAVQQMELVI 222
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ +++ G P++ + + +LP P E QE
Sbjct: 223 EGVLSIQAGVNPRLIRQKLQSLLPAD--PKAEKAKQE 257
>gi|302874599|ref|YP_003843232.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|307690790|ref|ZP_07633236.1| chemotaxis MotA protein [Clostridium cellulovorans 743B]
gi|302577456|gb|ADL51468.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
Length = 268
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 106/270 (39%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T I + I ++ II + GG I+IV + + PL I
Sbjct: 6 LYTPITIVIGMILIIWSIFL-GGELSNFFDFPSIIIVVFGSICSAAITFPLATILKIPSY 64
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F L +L L +L ++ E I D +
Sbjct: 65 FMVAFKEVKLS---NIQLLNLFTLLSRKARREGLLSLEESIIDVED-------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M+I G I+ +++ EID + + + + +G+ PA G+VG
Sbjct: 108 ---NFLKKGIQMVIDG-VEPAIIKEILELEIDQMEERHSEGINLMKTLGDYAPAFGMVGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + L P + +++ V+L T G ILS L P ++ +K K+ +
Sbjct: 164 LIGLINMLAYLDD-PTTIASSMAVALITTFYGTILSNMLYLPTSANLKLKSQKEVLQKEM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G +V E L ER
Sbjct: 223 MIEGILSVQSGVNTRVVEETLIAYLSSKER 252
>gi|188590744|ref|YP_001920213.1| chemotaxis protein MotA [Clostridium botulinum E3 str. Alaska E43]
gi|251778037|ref|ZP_04820957.1| chemotaxis protein MotA [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|188501025|gb|ACD54161.1| chemotaxis protein MotA [Clostridium botulinum E3 str. Alaska E43]
gi|243082352|gb|EES48242.1| chemotaxis protein MotA [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 267
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 98/252 (38%), Gaps = 22/252 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG I I I I G + ++ P+ +K +G +E F + + +
Sbjct: 23 IVSGGPLSIFIDGPSIAITLGGSISAVLIVYPMDGVKKAGKLFMESFKEP---KSSTMET 79
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ L ++ E+ I + F+ ++M++ G
Sbjct: 80 IAQFTELSRKARRDGLLSLEDTISQLED-----------------EFLKKGLQMVVDG-I 121
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
I+ +++ +I + S G P G++G ++G+I+ + NLS +
Sbjct: 122 EPESIKEILELDISEMEVRHKSGAGIFSTWGAFAPGFGMLGTLIGLIQMLQNLSDV-STI 180
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
T +G +L T G +++ L +P+ + + K+ + ++ + +++ +G P++
Sbjct: 181 ATGMGKALITTFYGSLIANILASPIAQNLLAKSQKEVAMKEMMLEGILSIQSGVNPRIVE 240
Query: 259 EYGRKVLPLSER 270
+ L ER
Sbjct: 241 DKLISYLSPKER 252
>gi|269103245|ref|ZP_06155942.1| Flagellar motor rotation protein MotA [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163143|gb|EEZ41639.1| Flagellar motor rotation protein MotA [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 253
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 114/277 (41%), Gaps = 27/277 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I+ GG+ + ++IV G +M + +
Sbjct: 3 LATLIGMLGAFAFIVMAMLL-GGSLGMFFDVPSVLIVFGGTTFVVLMKYSIGQFLGATKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
+ F YK + +++ + + +KG E ID+P
Sbjct: 62 AAKAFMYKTDNPE---ELIAKIVEMADAARKGGFLALEEMEIDNP--------------- 103
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + +++ G+ + + + ++I + + + G+ PA+G++G
Sbjct: 104 -----FLRKGIDLLVDGH-DADVVRATLQKDISLTHERHEQGIGIFTSFGDVGPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + N+ PK +G A+ V+L TL G IL+ + P+ ++ + ++
Sbjct: 158 TLIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGSILANMVALPIADKLSLRKDQERLNRR 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
++ ++A +G P+V Y + L +R + +
Sbjct: 217 LILDGVLAIQDGQNPRVIDGYLKNYLHEKKRVTAMDL 253
>gi|320529441|ref|ZP_08030529.1| flagellar motor protein MotA [Selenomonas artemidis F0399]
gi|320138407|gb|EFW30301.1| flagellar motor protein MotA [Selenomonas artemidis F0399]
Length = 287
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 99/263 (37%), Gaps = 27/263 (10%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
G G L P +I+ G + ++ + + + + +
Sbjct: 46 FVGMILKGAPLSALNNPAAFLIIIGGTFSCLFIGFRMEQLGNFVNLIKK--TCQVPQLQE 103
Query: 75 YCDVLKLLYILMYNLKKGSRNETEN---HIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
+++ L ++ E+ I+DP F +
Sbjct: 104 KGQLVQQFIELSQIARREGILALESKAQEIEDP--------------------FFRTGLG 143
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M+I G + +++D E+ I+ + + G P +G++GA++G+I A+GNL
Sbjct: 144 MVIDG-MDPDFVGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGLIAALGNL 202
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
+ LG +I + T+LGI Y L P +++K ++ ++ + +++ G
Sbjct: 203 ND-IDKLGHSIAAAFVATILGIFTGYVLWMPFANKLKIMSEQEVSQKRMIIEGILSLQAG 261
Query: 252 AIPQVAIEYGRKVLPLSERPSIE 274
P +P +ER +++
Sbjct: 262 DSPTAIEAKLMVFIPQTEREALK 284
>gi|152976911|ref|YP_001376428.1| flagellar motor protein MotA [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152025663|gb|ABS23433.1| MotA/TolQ/ExbB proton channel [Bacillus cytotoxicus NVH 391-98]
Length = 264
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 20/277 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG+ + ++ +I G + G L+ P +I+ + +A P+ +K
Sbjct: 4 ATIIGIILGLVAVIVGMFFKGAEVAALLNPAAALIIFVGTIAAVCIAFPMNQLKGVPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+ +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLESFVQWTSESRKYGILSLEQQLDGIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ + K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLERILEAELEAMEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAELEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
L+ G P + L SER +E A+
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSASERKKLEKGAE 260
>gi|315453528|ref|YP_004073798.1| putative flagellar motor proton channel MotA (pseudogene)
[Helicobacter felis ATCC 49179]
gi|315132580|emb|CBY83208.1| putative flagellar motor proton channel MotA (pseudogene)
[Helicobacter felis ATCC 49179]
Length = 256
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S+++G+ IL I G GGNP ++ ++I+ L +++ + +K +
Sbjct: 3 LSSVLGVVFAILAISVGDIMEGGNPAHVVHLSSLIIIIPTTLCAAMVSTHARHVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + +K + L +K E+ + +
Sbjct: 63 IKIVFLNPKINLQ---ETIKTIVELSTQARKDGVLSLESKVAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + MI+ G +++ ++ I+ + H GES P G+VGA
Sbjct: 106 ---DFTRNGFSMIVDGKDI-KSVQDSLEVAIEELEEHYHGAAHYWITAGESAPTFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ A+ L +P+ + I + T T+ GI+ SY+L P +++K+ + I+
Sbjct: 162 VLGLMLALQKL-DNPQEMALGIAGAFTATVTGIMCSYALFGPFGNKLKNKSKDILKEKIL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + +I NG P+ + E
Sbjct: 221 ILEGVIGIANGDNPRDLEMKLLNYIAPGE 249
>gi|15594626|ref|NP_212415.1| flagellar motor rotation protein A (motA) [Borrelia burgdorferi
B31]
gi|195941365|ref|ZP_03086747.1| flagellar motor rotation protein A (motA) [Borrelia burgdorferi
80a]
gi|216264391|ref|ZP_03436383.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
156a]
gi|218249470|ref|YP_002374804.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
ZS7]
gi|223888815|ref|ZP_03623406.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
64b]
gi|224533111|ref|ZP_03673711.1| chemotaxis protein MotA [Borrelia burgdorferi WI91-23]
gi|225552323|ref|ZP_03773263.1| chemotaxis protein MotA [Borrelia sp. SV1]
gi|226320582|ref|ZP_03796142.1| chemotaxis protein MotA [Borrelia burgdorferi 29805]
gi|226321599|ref|ZP_03797125.1| chemotaxis protein MotA [Borrelia burgdorferi Bol26]
gi|3915766|sp|Q44902|MOTA_BORBU RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|1165266|gb|AAA85605.1| MotA [Borrelia burgdorferi]
gi|2688185|gb|AAC66667.1| flagellar motor rotation protein A (motA) [Borrelia burgdorferi
B31]
gi|215980864|gb|EEC21671.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
156a]
gi|218164658|gb|ACK74719.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
ZS7]
gi|223885631|gb|EEF56730.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
64b]
gi|224511838|gb|EEF82239.1| chemotaxis protein MotA [Borrelia burgdorferi WI91-23]
gi|225371321|gb|EEH00751.1| chemotaxis protein MotA [Borrelia sp. SV1]
gi|226232788|gb|EEH31541.1| chemotaxis protein MotA [Borrelia burgdorferi Bol26]
gi|226234001|gb|EEH32722.1| chemotaxis protein MotA [Borrelia burgdorferi 29805]
gi|312149366|gb|ADQ29437.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
N40]
Length = 260
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I + ++ + +K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSFSALMASSEVVAVKKIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++K+L L +K ++ ++ +
Sbjct: 63 LGFFFRRNSYAK---VSIIKILVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G+ G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + LG+++ V+L TL G I++ + P+ +++ ++ + +
Sbjct: 162 LIGLVALLGNL-EDKSALGSSMAVALITTLYGTIMANLMFTPVQLKLEKIDTEEAAVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G P++ + L +R
Sbjct: 221 IIEGVLSIQSGDNPRILEQKLMTFLTPKDR 250
>gi|117619934|ref|YP_855926.1| chemotaxis protein MotA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117561341|gb|ABK38289.1| chemotaxis protein MotA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 243
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 98/262 (37%), Gaps = 22/262 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+ GL + + I GGN L+ VIV G G ++ P K + ++
Sbjct: 1 MFGLILALGAIAIAQLWHGGNLLTLLDGPAFVIVVGGTWGAVILQTPRKFLLEAIRQTRW 60
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ A + L+ ++ EN + E
Sbjct: 61 MLLPPAWDLVAQAERLQ---AWAVFARQQGLLALENQ-----------------ADQESD 100
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F + MI+ G + +I L++ +IDI MG P IGI+GA++G
Sbjct: 101 EFTRQGLTMIVDGVSID-DIRMLLEADIDIEQERNEHSARVFEAMGGYSPTIGIIGAVIG 159
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I+AM +L + P LG I V+ T+ G+ + L P+ +++++ + +
Sbjct: 160 LIQAMFHLEE-PASLGAGIAVAFVATIYGVGFANLLYLPIANRLRAFHYHYALFQEMTLE 218
Query: 244 ALIAYMNGAIPQVAIEYGRKVL 265
L+A +G + L
Sbjct: 219 GLMAIAHGENGPQVERRLKAYL 240
>gi|154687113|ref|YP_001422274.1| flagellar motor protein MotP [Bacillus amyloliquefaciens FZB42]
gi|154352964|gb|ABS75043.1| YtxD [Bacillus amyloliquefaciens FZB42]
Length = 271
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 99/252 (39%), Gaps = 24/252 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
++G I + I+ G G + +IV G ++ P + +K + L +
Sbjct: 13 MLGCIIVAIGILSGTGLAG--ISSFLDLTSFLIVTGGLAAAIFISFPPRDLKKTPSVLKQ 70
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + D +++++ L ++ ++
Sbjct: 71 VF---SRQDDNVKELVRVFVSLSEQARRQGLLSLDDQ-----------------AREIKD 110
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ + + I G I +MD EI + K G+ PA G++G ++G
Sbjct: 111 PFLKKGLLLAIDGW-DEETIRLVMDSEIAAMEERHRKGRRVFEKAGDFAPAWGMIGTLVG 169
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ + NL+ P LG + V+L TL G +L+ + P+ ++++ + + ++ +
Sbjct: 170 LVLMLKNLND-PHTLGPNMAVALLTTLYGALLANLVFIPIAAKLEEKTESEIFIKQVMIE 228
Query: 244 ALIAYMNGAIPQ 255
++ +G P+
Sbjct: 229 GVVGIQSGKNPR 240
>gi|326203247|ref|ZP_08193112.1| MotA/TolQ/ExbB proton channel [Clostridium papyrosolvens DSM 2782]
gi|325986505|gb|EGD47336.1| MotA/TolQ/ExbB proton channel [Clostridium papyrosolvens DSM 2782]
Length = 266
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 97/250 (38%), Gaps = 22/250 (8%)
Query: 16 GGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
G+ GG L + +IV G G ++A PL +K +L +F K +
Sbjct: 18 AGYLEEGGQLGALFKVAPFLIVFIGGFGATLVAFPLSEVKKMLSTLSMLFIQKKYNE--- 74
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
D++ L L +K E I + +++
Sbjct: 75 IDIINELADLSEKARKDGLLSLEQD-----------------AQTNKNDLIRKGLALVVD 117
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
G + I++++ E ++ MG + PA+G+ G ++G+I + +LS S
Sbjct: 118 G-IETEVIKDILARETELQEEIYESGAKMFEAMGGTWPAMGVCGTVMGMISILKDLSDS- 175
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
LG I + T+ G+ + + P ++IK+ ++ + I+ + L++ G P+
Sbjct: 176 NALGPKISSAFIATMYGVAFANLVWLPFGTKIKAKAARETMINEIIIEGLLSIQAGENPR 235
Query: 256 VAIEYGRKVL 265
+ E L
Sbjct: 236 IIKEKLNLNL 245
>gi|258592567|emb|CBE68876.1| MotA/TolQ/ExbB proton channel precursor [NC10 bacterium 'Dutch
sediment']
Length = 252
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 99/264 (37%), Gaps = 19/264 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ + GL I + I+G GG+ + +I+AG +G ++ LK
Sbjct: 3 LGILGGLAIGLTAIVGSVLLDGGDLRAFVNLPAFLIIAGGTVGATMVTASLKDTLALPKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + +V+ L L +K ++ + N
Sbjct: 63 MKRALCAGVALEPH--EVIVTLVDLAQTARKEGVLALQDRVSA----------------N 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ + ++I G A + +M EI + +K MG P +GI+G
Sbjct: 105 GVDPFLRKGIELVIDG-ADETIVREIMQAEIHSMKARHVKGIEIFGIMGGYAPTMGIIGT 163
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + L + LG I V+ T GI + L P++ +K + R+ +
Sbjct: 164 VMGLVHVLSKLGEGTDSLGRGIAVAFLATFYGIFSANVLFLPISGNLKVKSEAEVRIREV 223
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
+ + ++ +G P + + R
Sbjct: 224 MMEGVLGIQSGLNPHMLEQKLRSY 247
>gi|313896031|ref|ZP_07829585.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975456|gb|EFR40917.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 137 str. F0430]
Length = 285
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 99/263 (37%), Gaps = 27/263 (10%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
G G L P +I+ G + ++ + + + + +
Sbjct: 44 FVGMILKGAPLSALNNPAAFLIIIGGTFSCLFIGFRMEQLGNFVNLIKK--TCQVPQLQE 101
Query: 75 YCDVLKLLYILMYNLKKGSRNETEN---HIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
+++ L ++ E+ I+DP F +
Sbjct: 102 KGQLVQQFIELSQIARREGILALESKAQEIEDP--------------------FFRTGLG 141
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M+I G + +++D E+ I+ + + G P +G++GA++G+I A+GNL
Sbjct: 142 MVIDG-MDPDFVGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGLIAALGNL 200
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
+ LG +I + T+LGI Y L P +++K ++ ++ + +++ G
Sbjct: 201 ND-IDKLGHSIAAAFVATILGIFTGYVLWMPFANKLKIMSEQEVSQKRMIIEGILSLQAG 259
Query: 252 AIPQVAIEYGRKVLPLSERPSIE 274
P +P +ER +++
Sbjct: 260 DSPTAIEAKLMVFIPQTEREALK 282
>gi|227876750|ref|ZP_03994859.1| flagellar motor protein A [Mobiluncus mulieris ATCC 35243]
gi|269976277|ref|ZP_06183273.1| MotA/TolQ/ExbB proton channel [Mobiluncus mulieris 28-1]
gi|306817697|ref|ZP_07451439.1| chemotaxis MotA protein [Mobiluncus mulieris ATCC 35239]
gi|307699809|ref|ZP_07636860.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Mobiluncus mulieris FB024-16]
gi|227842647|gb|EEJ52847.1| flagellar motor protein A [Mobiluncus mulieris ATCC 35243]
gi|269935606|gb|EEZ92144.1| MotA/TolQ/ExbB proton channel [Mobiluncus mulieris 28-1]
gi|304649511|gb|EFM46794.1| chemotaxis MotA protein [Mobiluncus mulieris ATCC 35239]
gi|307614847|gb|EFN94065.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Mobiluncus mulieris FB024-16]
Length = 259
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 106/268 (39%), Gaps = 22/268 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IIG+ ++ ++ Y G + ++ P +++V G L + +K +
Sbjct: 4 ASIIGMVGAMVAVVAMLYMEGSHLTSILLPPPMILVFGGTLLATMATFTMKDFIYAFSRF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ K D + L ++ E+ +
Sbjct: 64 PKGLTAKLPDPTEAIDTIVSLSE---KARREGLLALEDAAKGIDD--------------- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
TF+ + + M + E+ ++ ++I+ Y G P IGI+G +
Sbjct: 106 --TFMREGL-MSAIDGMDPEELREMLGDKIEAKKESDKGAYEWFKQAGGYSPTIGIIGTV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+ ++ + NLS +P+ LG I + TL G++ + + P++ +++ + I+
Sbjct: 163 VSLVHVLTNLS-NPETLGPMIASAFVATLWGLLSANMIWLPMSGRLQRISQLEIARMEII 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ LI+ +GA P+ E R ++P S+
Sbjct: 222 TEGLISLQSGANPRQVGERLRSLIPPSQ 249
>gi|90410907|ref|ZP_01218921.1| flagellar motor protein [Photobacterium profundum 3TCK]
gi|90328120|gb|EAS44431.1| flagellar motor protein [Photobacterium profundum 3TCK]
Length = 253
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + + GG+ + ++IV G ++ + +
Sbjct: 3 LATLIGLVGSFAFVAMAMLL-GGSLGMFFDVPSVLIVLGGTTFVVLIKYSISQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K + D++ + + +KG E E
Sbjct: 62 AVKAFMFKTDNPE---DLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF+ + +++ G+ + + + ++I + K S G+ PA+G++G
Sbjct: 100 VDNTFLRKGIDLLVDGH-DADVVRATLQKDIGLTNERHEKGVGIFSSFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G I++ + P+ ++ + ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGSIVANMVAIPIADKLSLRKNEEKLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 ILDGVLAIQDGQNPRVIDGYLKNYLNEKKR 247
>gi|229032157|ref|ZP_04188133.1| hypothetical protein bcere0028_41990 [Bacillus cereus AH1271]
gi|228729163|gb|EEL80163.1| hypothetical protein bcere0028_41990 [Bacillus cereus AH1271]
Length = 266
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 58/278 (20%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IGL + ++ ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATLIGLILGVVAVVVGMVVKGADVMALVNPAAALIIFVGTFAAVCIAFPMNQLKRVPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAELEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|167588460|ref|ZP_02380848.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 254
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 94/258 (36%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ I+ GF GG+ L Q VIV G LG ++ N D+
Sbjct: 3 LLTLFGVVFGGAAIVFGFSLEGGHFATLFQLEAFVIVLGGTLGAVMIQNTWARFFDAVKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + L L K E+ ++ +
Sbjct: 63 LRLAF---VQARQVDRQSLTDLLEWGDRAKLNGLLAFES-----------------MDVS 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + +E+ + E+D + G P GI+G+
Sbjct: 103 GIHPFARRGLELLANGVSTA-VLEDALQRELDAYERSHMAAARVWQQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ ++ + P LG I V+ TL G+ L+ + PL ++++ + R +
Sbjct: 162 VMGLIQVTSHILE-PAQLGPGIAVAFVATLYGLALANLVFLPLYGKLRAQVDSELRFRKL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|51598541|ref|YP_072729.1| flagellar motor rotation protein A [Borrelia garinii PBi]
gi|219684631|ref|ZP_03539574.1| chemotaxis protein MotA (Motility protein A) [Borrelia garinii PBr]
gi|51573112|gb|AAU07137.1| flagellar motor rotation protein A [Borrelia garinii PBi]
gi|219671993|gb|EED29047.1| chemotaxis protein MotA (Motility protein A) [Borrelia garinii PBr]
Length = 260
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 105/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I + ++ + +K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITIVGSFSALMASSEVIAVKKIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++K+L L +K ++ ++ +
Sbjct: 63 LGFFFRRNSYAK---VSIIKILVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G++G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEVIRTMLYLELDQMQERHRVGSELFKTWAKLAPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + LG+++ V+L TL G I++ + P+ +++ ++ + +
Sbjct: 162 LIGLVALLGNL-EDKSALGSSMAVALITTLYGTIMANLMFTPVQLKLEKIDSEEAAVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G P++ + L +R
Sbjct: 221 IIEGVLSIQSGDNPRILEQKLMTFLTPKDR 250
>gi|325523699|gb|EGD01965.1| chemotaxis MotA protein [Burkholderia sp. TJI49]
Length = 254
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 95/258 (36%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GG+ L Q VIV G LG ++ N D+
Sbjct: 3 LLTLAGVVLGGAAIVFGFSLEGGHLATLFQLEAFVIVLGGTLGAVMIQNTWARFFDAVKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F A + L L K E+ ++ +
Sbjct: 63 LRLAFVRAAEVDRKH---LSALLEWGDRAKLDGLLAFES-----------------MDVS 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + IE+ + E+D L G P GI+G+
Sbjct: 103 GIHPFARRGIELLANGMSTA-VIEDALQRELDAYERSHLAAARVWQQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + R +
Sbjct: 162 VLGLVQVTSHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAQLDSELRFRKL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|225871804|ref|YP_002753258.1| chemotaxis MotA protein [Acidobacterium capsulatum ATCC 51196]
gi|225793187|gb|ACO33277.1| chemotaxis MotA protein [Acidobacterium capsulatum ATCC 51196]
Length = 269
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 100/269 (37%), Gaps = 22/269 (8%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
GG ++QP +IV G LG ++ PL + + L ++F G+ LK
Sbjct: 23 EGGRIDQIMQPTAAMIVFGGTLGAVMLQYPLATVLAALRRLAQVFFQ---GKSAGQATLK 79
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
L ++ + + + SI M+ V
Sbjct: 80 QLVEFANKARRHGIVSLDQDLAKIKEPFLKQSI------------------MLAVDGTEP 121
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
E+ +M+ ++D + + K G P IGI+GA+LG+I+ M +L +G
Sbjct: 122 AELRKIMELQLDNLTEREEKIPAVFESAGGFSPTIGIIGAVLGLIQVMQHLDH-IDQVGR 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
I V+ T+ G+ + P+ +++ ++HR+ +V + +I+ + G P++
Sbjct: 181 GIAVAFVATIYGVAAANLAFLPIAGKLRHRIREEHRVKEMVIEGVISILEGMNPRMIEVK 240
Query: 261 GRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
L + + A
Sbjct: 241 LESFLGAGSKAKGRKAKESAEAATEEVPA 269
>gi|42783686|ref|NP_980933.1| flagellar motor protein MotA [Bacillus cereus ATCC 10987]
gi|42739615|gb|AAS43541.1| chemotaxis protein MotA [Bacillus cereus ATCC 10987]
Length = 264
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/278 (20%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IG+ + ++ ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATLIGIILGVVAVVVGMVVKGADVMALVNPAAALIIFVGTFAAVCIAFPMNQLKKIPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYILWHPFANKLKQKSAAELEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|219685775|ref|ZP_03540586.1| chemotaxis protein MotA (Motility protein A) [Borrelia garinii
Far04]
gi|219672714|gb|EED29742.1| chemotaxis protein MotA (Motility protein A) [Borrelia garinii
Far04]
Length = 260
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 105/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I + ++ + +K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITIVGSFSALMASSEVIAVKKIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++K+L L +K ++ ++ +
Sbjct: 63 LGFFFRRNSYAK---VSIIKILVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G++G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEVIRTMLYLELDQMQERHRVGSELFKTWAKLAPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + LG+++ V+L TL G I++ + P+ +++ ++ + +
Sbjct: 162 LIGLVALLGNL-EDKSALGSSMAVALITTLYGTIMANLMFTPVQLKLEKIDSEEAVVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G P++ + L +R
Sbjct: 221 IIEGVLSIQSGDNPRILEQKLMTFLTPKDR 250
>gi|46580634|ref|YP_011442.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|120602059|ref|YP_966459.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|46450053|gb|AAS96702.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|120562288|gb|ABM28032.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|311234365|gb|ADP87219.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 253
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 51/273 (18%), Positives = 108/273 (39%), Gaps = 27/273 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T +G+ I +IG MG P I +IV G ++ PL+ + +
Sbjct: 3 IATFVGVIIGFGLVIGA-ILMGAAPGKFIDLPSAMIVFGGTFASILVTFPLEEVWQAVRG 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
L+ FG + + D++ + + ++ EN ++P
Sbjct: 62 GLKAFGSRKVEAR---DIVSTMVRIAEISRREGIIALENVQTENP--------------- 103
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ +I NA I + EI + + +G PA G++G
Sbjct: 104 ------LIKKACQLIADNADPTLIRTTVAIEISAMKRRHNISISVFNRLGGFAPAFGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + L P +G A+ V++ T G +LS + P+ ++K+ +++ +
Sbjct: 158 TLIGLVQMLATLDD-PTTIGPAMAVAIITTFYGALLSNLVFLPIAGKLKARSMQEELHLL 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
I+ + + + P++ E LP +R S
Sbjct: 217 IIFEGAKSILENNNPRLVYEKLSSFLPPKDRKS 249
>gi|84394352|ref|ZP_00993073.1| flagellar motor protein [Vibrio splendidus 12B01]
gi|84375011|gb|EAP91937.1| flagellar motor protein [Vibrio splendidus 12B01]
Length = 254
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG+ + I+IV G +M + +
Sbjct: 3 LATLIGLIGGFAFVIMAMIL-GGSLGMFYDTTSILIVVGGSTFVVLMKFTMGQFFGATKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKVVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + ++I + + S G+ PA+G++G
Sbjct: 100 ISNSFMQKGIDLLVDGHDGD-VVRAALQKDIALTTERHEQGAKVFSAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAILSNMVFFPIADKLALRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V ++A +G P+V Y + L +R
Sbjct: 218 VMDGVLAIQDGQNPRVIDGYLKSYLNEGKR 247
>gi|148976606|ref|ZP_01813293.1| flagellar motor protein PomA [Vibrionales bacterium SWAT-3]
gi|145963957|gb|EDK29215.1| flagellar motor protein PomA [Vibrionales bacterium SWAT-3]
Length = 254
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG+ + I+IV G +M + +
Sbjct: 3 LATLIGLIGGFAFVIMAMIL-GGSLGMFYDTTSILIVVGGSTFVVLMKFTMGQFFGATKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + ++I + + S G+ PA+G++G
Sbjct: 100 ISNSFMQKGIDLLVDGHDGD-VVRAALQKDIALTTERHEQGAKVFSAFGDVSPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAILSNMVFFPIADKLALRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V ++A +G P+V Y + L +R
Sbjct: 218 VMDGVLAIQDGQNPRVIDGYLKSYLNEGKR 247
>gi|206977759|ref|ZP_03238650.1| chemotaxis protein MotA [Bacillus cereus H3081.97]
gi|217961996|ref|YP_002340566.1| flagellar motor protein MotA [Bacillus cereus AH187]
gi|222097979|ref|YP_002532036.1| flagellar motor protein mota [Bacillus cereus Q1]
gi|206744060|gb|EDZ55476.1| chemotaxis protein MotA [Bacillus cereus H3081.97]
gi|217066364|gb|ACJ80614.1| chemotaxis protein MotA [Bacillus cereus AH187]
gi|221242037|gb|ACM14747.1| chemotaxis protein (motility protein A) [Bacillus cereus Q1]
gi|324328405|gb|ADY23665.1| flagellar motor protein MotA [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 264
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/278 (20%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IG+ + ++ ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATLIGIILGVVAVVVGMVVKGADVMALVNPAAALIIFVGTFAAVCIAFPMDQLKKIPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYILWHPFANKLKQKSAAELEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|15615802|ref|NP_244106.1| flagellar motor protein MotP [Bacillus halodurans C-125]
gi|10175863|dbj|BAB06959.1| flagellar motor apparatus [Bacillus halodurans C-125]
Length = 269
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 53/285 (18%), Positives = 114/285 (40%), Gaps = 23/285 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYI--LIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
+ T +GLF+ I ++ ++ G I IQ ++IV G + V+ +K
Sbjct: 6 ILTPVGLFLGITVLLLAVFSNSGPSGIVFFIQISSVLIVIGGIVSALVITFSFTELKQVP 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L+E F + +++ L ++ E +D+
Sbjct: 66 RVLMEAFRTQDH---DLGKLVQTFVNLSGKARREGLLALEAGLDEEVE------------ 110
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
FI + ++ V I+++M E+ + K I E PA G++
Sbjct: 111 ----DPFIRKGI-LLAVDGIEPDVIKDIMMAEVTAMEERHTKSRALIDKAAEYAPAWGMI 165
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ + NL+ P LG + V+L TL G +L+ + P+++++ + + +
Sbjct: 166 GTLIGLVLMLQNLND-PSTLGPNMAVALLTTLYGTVLANLVFLPMSTKLMNKTDSEVFVK 224
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
I+ + +I +G P++ E + ++ + E E +
Sbjct: 225 QIIIEGVIGVQSGQNPKILEEKLSAFITKKDKEADEETGDEANEA 269
>gi|51246517|ref|YP_066401.1| flagellar motor apparatus (MotA) [Desulfotalea psychrophila LSv54]
gi|50877554|emb|CAG37394.1| related to flagellar motor apparatus (MotA) [Desulfotalea
psychrophila LSv54]
Length = 255
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 106/272 (38%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ ++ GG I I I+IV G G ++ P + D+
Sbjct: 3 LSTILGICAAFGLMLMA-ILQGGPLSIFINIPSIMIVFGGTAGNILVHYPFADVFDAINV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F YK D L +K + I+ +
Sbjct: 62 AKKTFLYKETSASALID---QLMDFANKARKEGILALQASINTIED-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M + G + ++ EID I K + + PA+G+VG
Sbjct: 105 ---PFLLKAVQMAVDGQ-EPETLRRMLMTEIDYIQVRHEKGGDIFNALALYAPAMGMVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + + P +G A+ V+L T G +++ +C P+ ++++ + +
Sbjct: 161 LIGLVQMLQTMDD-PSTIGPAMAVALLTTFYGAVIANVVCTPMAGKLRNRSDSEILTKTL 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + + + ++G P++ + + R S
Sbjct: 220 IAEGMQSILSGENPRIMEQKLHAFIAPKLRDS 251
>gi|221217706|ref|ZP_03589174.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
72a]
gi|224533822|ref|ZP_03674410.1| chemotaxis protein MotA [Borrelia burgdorferi CA-11.2a]
gi|225550103|ref|ZP_03771063.1| chemotaxis protein MotA [Borrelia burgdorferi 118a]
gi|221192383|gb|EEE18602.1| chemotaxis protein MotA (Motility protein A) [Borrelia burgdorferi
72a]
gi|224513115|gb|EEF83478.1| chemotaxis protein MotA [Borrelia burgdorferi CA-11.2a]
gi|225369215|gb|EEG98668.1| chemotaxis protein MotA [Borrelia burgdorferi 118a]
Length = 260
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 103/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I + ++ + +K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSFSALMASSEVVAVKKIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + ++K+L L +K ++ ++ +
Sbjct: 63 LGFFFRRNLYAK---VSIIKILVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G+ G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + LG+++ V+L TL G I++ + P+ +++ ++ + +
Sbjct: 162 LIGLVALLGNL-EDKSALGSSMAVALITTLYGTIMANLMFTPVQLKLEKIDTEEAAVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G P++ + L +R
Sbjct: 221 IIEGVLSIQSGDNPRILEQKLMTFLTPKDR 250
>gi|229163500|ref|ZP_04291451.1| hypothetical protein bcere0009_42660 [Bacillus cereus R309803]
gi|228620069|gb|EEK76944.1| hypothetical protein bcere0009_42660 [Bacillus cereus R309803]
Length = 264
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG+ + + ++ G G + L+ P +I+ +A P+ +K
Sbjct: 4 ATIIGIILGVAAVVVGMVVKGADVMALVNPAAALIIFVGTFAAVCIAFPMNQLKRIPKLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 64 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 107
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 108 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 164
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 165 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYILWHPFANKLKQKSAAEIEKKRLI 223
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 224 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 261
>gi|258621631|ref|ZP_05716663.1| flagellar motor protein [Vibrio mimicus VM573]
gi|258624382|ref|ZP_05719330.1| flagellar motor protein [Vibrio mimicus VM603]
gi|262165142|ref|ZP_06032879.1| Flagellar motor rotation protein MotA [Vibrio mimicus VM223]
gi|262172095|ref|ZP_06039773.1| Flagellar motor rotation protein MotA [Vibrio mimicus MB-451]
gi|258583344|gb|EEW08145.1| flagellar motor protein [Vibrio mimicus VM603]
gi|258586103|gb|EEW10820.1| flagellar motor protein [Vibrio mimicus VM573]
gi|261893171|gb|EEY39157.1| Flagellar motor rotation protein MotA [Vibrio mimicus MB-451]
gi|262024858|gb|EEY43526.1| Flagellar motor rotation protein MotA [Vibrio mimicus VM223]
Length = 254
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 114/270 (42%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + +I GG+ + + I+IV G + +M + +G
Sbjct: 3 LATLIGLIGGLAFVIMAMVL-GGSLMMFVDVVSILIVVGGSVFVVLMKFTMGQFFGAGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 ASKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + + + ++I + K G+ PA+G++G
Sbjct: 100 IPNPFMQKGIDLLVDGH-DADVVRATLQKDIALTDERHSKGTQVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L S+R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNASKR 247
>gi|220927722|ref|YP_002504631.1| MotA/TolQ/ExbB proton channel [Clostridium cellulolyticum H10]
gi|219998050|gb|ACL74651.1| MotA/TolQ/ExbB proton channel [Clostridium cellulolyticum H10]
Length = 266
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 22/245 (8%)
Query: 21 MGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLK 80
GGN L++ +IV G G G ++A PL IK ++ +F K + D++
Sbjct: 23 EGGNLGALLKIGPFLIVFGGGFGATLVAFPLSEIKKMLSTINMLFIQKKYNE---IDIIN 79
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
L L +K E I + +++ G +
Sbjct: 80 ELADLSEKARKDGLLSLEQD-----------------AQTNKNELIRKGLALVVDG-IET 121
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
I++++ E ++ MG + PA+G+ G ++G+I + +LS S LG
Sbjct: 122 EVIKDILARETELQEEIYESGVKIFEAMGGTWPAMGVCGTVMGMISILKDLSDS-DALGP 180
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
I + T+LG+ + + P ++IKS ++ + I+ + L++ G P++ E
Sbjct: 181 KISGAFIATMLGVGTANLIWLPFGTKIKSKAARETMINEIIIEGLLSIQAGENPRIIKEK 240
Query: 261 GRKVL 265
L
Sbjct: 241 LNLNL 245
>gi|150019085|ref|YP_001311339.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
gi|149905550|gb|ABR36383.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
Length = 262
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 109/275 (39%), Gaps = 22/275 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ TI+ + +CI+ GF GG P L+QP +IV G +G ++ PL +K
Sbjct: 3 IMTILSILFAFVCIVVGFVIEGGKPIALLQPTAALIVIGGTIGAIGISFPLTTLKKFPKV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F K + + + ++ E+ + +
Sbjct: 63 LSIAFRKKE---SDLKEHILYFKEISIKTRRDGLLSLESELTN----------------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+L FI ++M++ G ++N+++ +++ + + G P +GIVG
Sbjct: 103 DLDPFIKRGLQMVVDG-IDPASVKNILNTKLEQLSARHEDYSEMFTSAGGYAPTMGIVGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
I ++ + +LS +G I V+ TL G+ + P+ +++K K+ +
Sbjct: 162 ITSLVIILSDLSDV-AKMGEKIAVAFIATLYGLGTANLFWIPIANKLKEINKKEIAEKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ +A++ G P + L +E +E
Sbjct: 221 IIEAVLLIQEGVNPNTLVSKLVSYLTENEAEDLEE 255
>gi|224532267|ref|ZP_03672899.1| chemotaxis protein MotA (Motility protein A) [Borrelia valaisiana
VS116]
gi|224511732|gb|EEF82138.1| chemotaxis protein MotA (Motility protein A) [Borrelia valaisiana
VS116]
Length = 260
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I + ++ + +K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSFSALMASSEVIAVKKIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++K+L L +K ++ ++ +
Sbjct: 63 LGFFFRRNSYAK---ISIIKILVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G+ G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + LG+++ V+L TL G I++ + P+ +++ ++ + +
Sbjct: 162 LIGLVALLGNL-EDKSALGSSMAVALITTLYGTIMANLMFIPVQLKLEKIDSEEAAVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G P++ + L +R
Sbjct: 221 IIEGVLSIQSGDNPRILEQKLMTFLTPKDR 250
>gi|183222195|ref|YP_001840191.1| chemotaxis MotA protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189912249|ref|YP_001963804.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776925|gb|ABZ95226.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780617|gb|ABZ98915.1| Chemotaxis MotA protein; putative membrane protein; putative signal
peptide [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 245
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 93/259 (35%), Gaps = 23/259 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST++G+ + IL + G + + ++ G LG + + I +
Sbjct: 4 STLLGILVAILSVFVAILIEGASLRSFFHIPAMFLIVGGTLGATFASFSISQISKAVRDT 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ D+ + + +K E+ NS
Sbjct: 64 RYALR-----KQKETDLKLVFFRFWEKARKDGLLSLEDESKKLDNS-------------- 104
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++I+ G + IE ++ E + LK P IGI+G +
Sbjct: 105 ---FLQKGIQLIVDG-SDPRTIEEILWEAHEEKEKVDLKSAKIFETAAGFSPTIGIIGTV 160
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG++ + NL K LG I + T GI + + P+++Q+K ++ +
Sbjct: 161 LGLVTVLENLDGGTKALGQGIATAFIATFYGISFANLILLPISNQLKVVAKRESNERQAI 220
Query: 242 KKALIAYMNGAIPQVAIEY 260
+ +++ +G ++ E
Sbjct: 221 MRGILSLQSGENRRILAER 239
>gi|229141243|ref|ZP_04269782.1| hypothetical protein bcere0013_43360 [Bacillus cereus BDRD-ST26]
gi|229198661|ref|ZP_04325362.1| hypothetical protein bcere0001_41870 [Bacillus cereus m1293]
gi|228584820|gb|EEK42937.1| hypothetical protein bcere0001_41870 [Bacillus cereus m1293]
gi|228642284|gb|EEK98576.1| hypothetical protein bcere0013_43360 [Bacillus cereus BDRD-ST26]
Length = 266
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 57/278 (20%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IG+ + ++ ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATLIGIILGVVAVVVGMVVKGADVMALVNPAAALIIFVGTFAAVCIAFPMDQLKKIPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG +Y +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SYEQLLELFVHWTSESRKYGILSLEQQLDKIQD--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYILWHPFANKLKQKSAAELEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|301167894|emb|CBW27479.1| putative chemotaxis MotA protein [Bacteriovorax marinus SJ]
Length = 259
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIGL + I+G +GG+ I I ++V +G P++VIK+
Sbjct: 5 IASIIGLVVATAAILGS-ILVGGDLGIFIDVPSTLVVGLGLIGVTFFKWPMEVIKNIVAF 63
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH-IDDPYNSTIFTSIPTVLEN 119
++ F + D ++ + L ++ S E IDDP
Sbjct: 64 AMKGFFFSPSDPK---DTIEEIGNLAETARRESVFALEKVPIDDP--------------- 105
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ M + N I +++ EID ++ M + PA+G++G
Sbjct: 106 -----FLKKAMTLAAD-NRPPEVIASILQLEIDAMVERHKVGADVFQGMADDGPAMGMIG 159
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + NLS P +G A+ V+L T G I++ CNP+ ++I +
Sbjct: 160 TLIGLVQMLQNLSD-PSAIGPAMAVALLTTFYGAIIANVFCNPMKNKIAFRSSLEATKMN 218
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + + G P++ E LP ++R
Sbjct: 219 IIIAGTLGIVAGENPRLIKEKLNAFLPPAQR 249
>gi|254248922|ref|ZP_04942242.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|124875423|gb|EAY65413.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
Length = 260
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 101/259 (38%), Gaps = 24/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+
Sbjct: 9 LLTLVGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQ 68
Query: 61 LLEIF-GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L F + + + D+L K E+ ++
Sbjct: 69 LRLAFVRAREVDRKNLSDLL----EWGDRAKLDGLLAFES-----------------MDV 107
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ + F + ++ G + + +E+ + E+D +L G P GI+G
Sbjct: 108 SGIHPFARRGLELLANGVSTA-VLEDALQRELDAYERSRLAAVRVWQQAGGYAPTFGILG 166
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + R
Sbjct: 167 SVLGLVQVTSHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAQIDSEMRFRK 225
Query: 240 IVKKALIAYMNGAIPQVAI 258
+ L+A P
Sbjct: 226 LYLDGLLAISRKESPHTIE 244
>gi|170736168|ref|YP_001777428.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|206562637|ref|YP_002233400.1| chemotaxis protein PomA [Burkholderia cenocepacia J2315]
gi|169818356|gb|ACA92938.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|198038677|emb|CAR54637.1| chemotaxis protein PomA [Burkholderia cenocepacia J2315]
Length = 254
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 101/259 (38%), Gaps = 24/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+
Sbjct: 3 LLTLVGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQ 62
Query: 61 LLEIF-GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L F + + + D+L K E+ ++
Sbjct: 63 LRLAFVRAREVDRKNLSDLL----EWGDRAKLDGLLAFES-----------------MDV 101
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ + F + ++ G + + +E+ + E+D +L G P GI+G
Sbjct: 102 SGIHPFARRGLELLANGVSTA-VLEDALQRELDAYERSRLAAVRVWQQAGGYAPTFGILG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + R
Sbjct: 161 SVLGLVQVTSHILE-PAQLGPGIAVAFVATLYGLAFANLVFLPLYGKLRAQIDSEMRFRK 219
Query: 240 IVKKALIAYMNGAIPQVAI 258
+ L+A P
Sbjct: 220 LYLDGLLAISRKESPHTIE 238
>gi|85711189|ref|ZP_01042249.1| flagellar motor protein [Idiomarina baltica OS145]
gi|85695102|gb|EAQ33040.1| flagellar motor protein [Idiomarina baltica OS145]
Length = 255
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ I ++ GG+P + I ++IV G L + PL+ +G
Sbjct: 3 IATLVGIIGAIGFVVAAMIL-GGDPGLFIDTQSLLIVVGGSLFIVMANFPLQQFFATGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F +K D + + +KG E
Sbjct: 62 VVKAFFFKIEHPQELIDSA---VEMADSARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + M++ G+ + +++ + ++I + + + + PA+G++G
Sbjct: 100 IPNPFFRKGVDMLVDGH-DAEVVKHTLSKDISMSFTRHEEGARFFKILADVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G L+ + P+ +++ ++ +
Sbjct: 159 LIGLVAMLANMDD-PKAIGPAMSVALLTTLYGAFLANVIAIPIANKLVLRAEQEKLNRQL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++ +G P+V R L S+R
Sbjct: 218 ILDAILGIQDGQNPRVIEGLLRNYLAESKR 247
>gi|160901601|ref|YP_001567182.1| MotA/TolQ/ExbB proton channel [Petrotoga mobilis SJ95]
gi|160359245|gb|ABX30859.1| MotA/TolQ/ExbB proton channel [Petrotoga mobilis SJ95]
Length = 259
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 106/266 (39%), Gaps = 25/266 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIGL + I I+ G G LI I +G +A+P
Sbjct: 3 ISTIIGLALAIAAIVVG---AGSEFTTLIDIPSFFITVVGSVGATFIAHPSSNSFKMFNM 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+LE F + + L+ LY ++ E I P+V +
Sbjct: 60 ILEAFKNPKI---DNLETLRTLYSFSEKARRDGMISLEEDI------------PSVKSD- 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ D +R + G EI+ +++ ++D+ + + G PA G+VG
Sbjct: 104 ----FLRDGLRAAVDGT-DPEEIKKILEVKMDMYQETEEDKISVLDTWGAMAPAWGMVGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + LS P +G + ++L TL G +++Y P ++K K +
Sbjct: 159 LIGLVLLLDTLSD-PTTIGPRMSLALITTLYGALIAYIFALPPAEKLKKRVDKNINQMRM 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLP 266
+ + +++ + G P + E + L
Sbjct: 218 MLEGILSIVQGENPHLMEEKLKAFLS 243
>gi|288553787|ref|YP_003425722.1| flagellar motor protein MotP [Bacillus pseudofirmus OF4]
gi|34485058|gb|AAB94399.2| channel protein [Bacillus pseudofirmus OF4]
gi|288544947|gb|ADC48830.1| Flagellar motor rotation protein motP [Bacillus pseudofirmus OF4]
gi|327187184|dbj|BAK08925.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
gi|327187187|dbj|BAK08927.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
gi|327187190|dbj|BAK08929.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
gi|327187193|dbj|BAK08931.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 266
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 110/273 (40%), Gaps = 26/273 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
+ T IG+F+ I ++ ++ G IQ I+IV G + ++ L +K
Sbjct: 6 ILTPIGVFLGITVLLLAVFSNSGPSGLIFFIQIASILIVLGGLIAALIITFSLPDLK--- 62
Query: 59 VSLLEIFGYKALGQDTYCD-VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+ ++ D + +++ L ++ E ++D + I +
Sbjct: 63 -MVPKVLKESVQTVDHDLEGLIQTFVDLSGKARREGLLALEVGLEDVRDPFIKKGV---- 117
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
++ V I+++M E+ + K I GE PA G+
Sbjct: 118 --------------LLAVDGIEPDVIKDIMMAEVVAMEERHRKGRAIIEKAGEYAPAWGM 163
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G++ + NL+ P LG + V+L TL G +L+ + P+ +++ + ++ +
Sbjct: 164 IGTLIGLVLMLQNLND-PATLGPNMAVALLTTLYGTVLANLIFLPMATKLANKTDEEVFV 222
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + +I +G P++ E ++
Sbjct: 223 KQIIIEGVIGVQSGQNPKILEEKLSAFTREKQK 255
>gi|256750879|ref|ZP_05491763.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913255|ref|ZP_07130572.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X561]
gi|307723731|ref|YP_003903482.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X513]
gi|320116544|ref|YP_004186703.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|256750214|gb|EEU63234.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889940|gb|EFK85085.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X561]
gi|307580792|gb|ADN54191.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X513]
gi|319929635|gb|ADV80320.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 274
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 18/253 (7%)
Query: 17 GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC 76
GF GG LI +IV G +G ++ + IK L F + +D Y
Sbjct: 21 GFTLGGGTVTSLIDVPSAIIVLGGTIGATIITYSMDNIKKVPRLLARAFKNE---KDNYL 77
Query: 77 DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG 136
+++K L + S E + + + + +++ G
Sbjct: 78 EIIKYFTYLAQKARSEGLLSL-------------ESEIESEEIKKFDPILKECLELVVDG 124
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
+ I+ M+ +I + E K G P +G++G ++G+++A+GNL++ P
Sbjct: 125 SDMEL-IKTTMENKIYVEDMEAKKEAGIFESAGGYAPTMGLIGTVMGLVQALGNLTE-PD 182
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
LG A+ V+ TL G IL+ P+ ++K+ + ++ + ++ G P++
Sbjct: 183 KLGPAVAVAFITTLYGAILANVFFLPIAQKLKNRAKVKTTERELILEGSLSLQAGENPRI 242
Query: 257 AIEYGRKVLPLSE 269
+ ++
Sbjct: 243 LERKLMTFVAQAQ 255
>gi|86147427|ref|ZP_01065739.1| flagellar motor protein [Vibrio sp. MED222]
gi|218710366|ref|YP_002417987.1| flagellar motor protein PomA [Vibrio splendidus LGP32]
gi|85834720|gb|EAQ52866.1| flagellar motor protein [Vibrio sp. MED222]
gi|218323385|emb|CAV19562.1| flagellar motor protein [Vibrio splendidus LGP32]
Length = 254
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG+ + ++IV G +M + +
Sbjct: 3 LATLIGLIGGFAFVIMAMIL-GGSLGMFYDTTSVLIVIGGSTFVVLMKFTMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKVVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + ++I + + + G+ PA+G++G
Sbjct: 100 ISNSFMQKGIDLLVDGHDGD-VVRAALQKDIALTTERHEQGAKVFTAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAILSNMVFFPIADKLALRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V ++A +G P+V Y + L +R
Sbjct: 218 VMDGVLAIQDGQNPRVIDGYLKSYLNEGKR 247
>gi|182418693|ref|ZP_02626763.2| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237669679|ref|ZP_04529656.1| chemotaxis protein MotA [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377470|gb|EDT75025.1| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237654753|gb|EEP52316.1| putative chemotaxis protein MotA [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 260
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 115/275 (41%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +IGL ++ G G +P IL I+++ + G + + P +
Sbjct: 3 IFLVIGLIGGSAVVLSGLLMKGASPSILFSGEAIMVIIVGSIIGILNSFPKNEVTKIPKI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F K G+ ++++ L + ++ E I N
Sbjct: 63 LGVLFSNK--GRQDPVEIIEQLIEMSQRTRRDGLLSLEGTIQGLDNR------------- 107
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G S I+ +++ EI+ + S G + P +G++GA
Sbjct: 108 ----FMKKGLEMVVDG-MESDIIKEVLEIEIESMEERHRLGATVFSTAGGTAPTLGVLGA 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+GNL+ LG +I + T+ GI Y + +P ++++K L++ + I
Sbjct: 163 VIGLIGALGNLND-IDKLGESISSAFVATVYGIFCGYLIFHPFSNRLKRKSLEEIKNMNI 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++A G P+ +L +R +E
Sbjct: 222 ILEGVLAIQAGNNPKSIERKLVGMLEPKDRIKLEK 256
>gi|51894109|ref|YP_076800.1| flagellar motor protein MotA [Symbiobacterium thermophilum IAM
14863]
gi|51857798|dbj|BAD41956.1| flagellar motor protein MotA [Symbiobacterium thermophilum IAM
14863]
Length = 265
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 100/268 (37%), Gaps = 22/268 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI GL I+ I G Y L+ +IV G +G ++++ ++ +K
Sbjct: 3 LATIGGLLFAIIAIAVGAYLEHVTLDSLLGISAFLIVVGGSIGATIVSSAVEDLKQVPRV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + Y ++ LL L ++ + + N + +
Sbjct: 63 LKMAFSPP---KRDYQGMIDLLVGLAEKARRNGLLSLQEDAEHAENPVVQRGL------- 112
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ V A ++ +M + E ++ G P +GI+G
Sbjct: 113 -----------TMAVDGADPEQVVAVMRAMSEQQADEIIRGAAVFDTAGGYAPTLGIMGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I MG LS+ P LG AI V+ TL G+ + P+ +IK+ + +
Sbjct: 162 VMGLITIMGRLSE-PDTLGPAIAVAFLATLYGLGSANLFFLPMGYKIKAIAKQLTHFNEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLS 268
+ + G P+ E LP +
Sbjct: 221 IIVGIEGIQAGENPRNLREKLSIYLPST 248
>gi|326794295|ref|YP_004312115.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326545059|gb|ADZ90279.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 251
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + + I+ GG+ + + P I+IV +M PL +G
Sbjct: 3 LATLVGLIGSFVIILLAILL-GGSAGMFVDPASILIVLIGSTFVTLMQYPLGQFLGAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K++ D D +Y L +KG E
Sbjct: 62 AAKAFMFKSVPLDALIDE---VYGLADEARKGGLLSLEG-------------------KE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G+ S ++ + +++++ +G+ PA+G++G
Sbjct: 100 VSHPFMSKGIQMLVDGHDGS-VVKGQLSKDMNMAFTRHDNGAKIFKALGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+ PK +G A+ V+L TL G +L+ +C P+ +++++ ++ +
Sbjct: 159 LVGLVQMLANMDD-PKAIGPAMAVALLTTLYGAMLANMVCLPIQAKLENRAKEELMCQQL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ AL+A G P+V + +P S+R
Sbjct: 218 ILDALLAIQAGQNPRVLDGSLKTFIPESKR 247
>gi|260767265|ref|ZP_05876206.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|260617773|gb|EEX42951.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|315180896|gb|ADT87810.1| flagellar motor protein PomA [Vibrio furnissii NCTC 11218]
Length = 254
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + ++ GG+ + + I+IV G L +M + +
Sbjct: 3 LATLIGLIGGLAFVVMAMVL-GGSIMMFVDVTSILIVVGGSLFVVLMKFTMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + G+ PA+G++G
Sbjct: 100 ISNSFMQKGIDLLVDGH-DADVVRATLQKDISLTDERHEAGTGVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAVLSNMVFFPIADKLSLRREQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|111115106|ref|YP_709724.1| flagellar motor rotation protein A [Borrelia afzelii PKo]
gi|216264071|ref|ZP_03436065.1| chemotaxis protein MotA (Motility protein A) [Borrelia afzelii
ACA-1]
gi|110890380|gb|ABH01548.1| flagellar motor rotation protein A [Borrelia afzelii PKo]
gi|215980115|gb|EEC20937.1| chemotaxis protein MotA (Motility protein A) [Borrelia afzelii
ACA-1]
Length = 260
Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I + ++ + +K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSFSALMASSEVIAVKKIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++K+L L +K ++ ++ +
Sbjct: 63 LGFFFRRNSHAK---ISIIKILVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G+ G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + LG+++ V+L TL G I++ + P+ +++ ++ + +
Sbjct: 162 LIGLVALLGNL-EDKSALGSSMAVALITTLYGTIMANLMFIPVQLKLEKIDSEEAAVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G P++ + L +R
Sbjct: 221 IIEGVLSIQSGDNPRILEQKLMTFLTPKDR 250
>gi|167038134|ref|YP_001665712.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167039155|ref|YP_001662140.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X514]
gi|166853395|gb|ABY91804.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X514]
gi|166856968|gb|ABY95376.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter pseudethanolicus
ATCC 33223]
Length = 272
Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 18/253 (7%)
Query: 17 GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC 76
GF GG LI +IV G +G ++ + IK L F + +D Y
Sbjct: 19 GFTLGGGTVTSLIDVPSAIIVLGGTIGATIITYSMDNIKKVPRLLARAFKNE---KDNYL 75
Query: 77 DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG 136
+++K L + S E + + + + +++ G
Sbjct: 76 EIIKYFTYLAQKARSEGLLSL-------------ESEIESEEIKKFDPILKECLELVVDG 122
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
+ I+ M+ +I + E K G P +G++G ++G+++A+GNL++ P
Sbjct: 123 SDMEL-IKTTMENKIYVEDMEAKKEAGIFESAGGYAPTMGLIGTVMGLVQALGNLTE-PD 180
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
LG A+ V+ TL G IL+ P+ ++K+ + ++ + ++ G P++
Sbjct: 181 KLGPAVAVAFITTLYGAILANVFFLPIAQKLKNRAKVKTTERELILEGSLSLQAGENPRI 240
Query: 257 AIEYGRKVLPLSE 269
+ ++
Sbjct: 241 LERKLMTFVAQAQ 253
>gi|291286230|ref|YP_003503046.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290883390|gb|ADD67090.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 254
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 108/272 (39%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G + + ++ MG I ++IV G G M+ P+ +
Sbjct: 3 IATIVGTLLAYILVVSAM-LMGAGIGPYIDIPSVLIVIGGVTGIVFMSFPMD---KALGL 58
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ D ++ L ++ E+ E+
Sbjct: 59 IKFAMKTIKYPLDDPASLISQLVEFAVKARRDGILSLESA-----------------EDE 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +R+ + G I+N+++ E++ ++ + M PA+G++G
Sbjct: 102 VKDEFLKKGIRLAVDGT-EPEVIKNILETELEYMVSRHKLGASVLGCMEAFGPAMGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + ++ + P +G A+ V+L T+ G +L+ P +I+ ++ L I
Sbjct: 161 LIGLVAMLQSM-EDPSTIGPAMAVALLTTMYGAMLANLFAGPFRIKIEVRSGQEQLLREI 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ ++A G P++ + LP S+R S
Sbjct: 220 MIGGIMAIQAGDNPRIVEQKLNAYLPPSQRKS 251
>gi|312884944|ref|ZP_07744634.1| flagellar motor protein PomA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367421|gb|EFP94983.1| flagellar motor protein PomA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 254
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 114/270 (42%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL +I GG+ + I I+IV G + +M + +G
Sbjct: 3 LATLVGLIGGFAFVIMAMIL-GGSITMFIDVISILIVVGGSIFVVMMKFTMGQFFGAGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K+ D D++ + + +KG E E
Sbjct: 62 AGKAFMFKS---DEPEDLIAKVVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + + ++I + + G+ PA+G++G
Sbjct: 100 ITNSFMQKGIDLLVDGH-DADVVRSALQKDISLTDERHDSGCNVFRAFGDVSPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAILSNMIFFPIADKLSLRREQEKLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|206890192|ref|YP_002248657.1| chemotaxis MotA protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742130|gb|ACI21187.1| chemotaxis MotA protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 253
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 107/270 (39%), Gaps = 26/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++GL I I +I G A GG LIQ +IV G G +++ P K I + +S
Sbjct: 3 LIALLGLIIGIGAVIAGNIAEGGTTAHLIQAAAAIIVFGGTFGAVILSFPFKDIVTAFMS 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L IF + + D D + L+ +K + +D +S
Sbjct: 63 LKFIFLSRKVNFDETIDTIL---DLLVIARKRGLLALQEELDRIDDS------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +I G I+ +++EI + G P IGI+GA
Sbjct: 107 ----FLRRGITYVIDG-VSPNIIKESLNQEIYAYEEIIKRAAKVYDSAGGYAPTIGIIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
ILG+I + N++ P +G I + T+ G+ + + P+ +I + + L +
Sbjct: 162 ILGLIHVLKNVAD-PSKIGIGIATAFVATIYGVGSANLIFIPIAKRIVNKLEDEILLMEL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + ++ G P + R L R
Sbjct: 221 MIEGILGIEAGMNPY----FLRAKLESFVR 246
>gi|315127297|ref|YP_004069300.1| chemotaxis motA protein [Pseudoalteromonas sp. SM9913]
gi|315015811|gb|ADT69149.1| chemotaxis motA protein [Pseudoalteromonas sp. SM9913]
Length = 254
Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 24/270 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++GL + + I G+ GG L ++IV G LG ++ K
Sbjct: 4 LSVLGLLVALGAIAIGYSLEGGVVSALFNGPALIIVLGGTLGAVMLQTSANTFKKMLSIT 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F D ++ + + ++ EN
Sbjct: 64 HWVF---VTDDHDIEDAIEQVKRWSHKARQEGYLALENE-----------------ALAH 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ + +++ G ++ + ++ ++ + L MG P IGI+GA+
Sbjct: 104 SDPYAAKGLSLLVDG-CSEQKLRDTLEIDLLLERERLLDASRVYEAMGGYSPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+AM ++ P+ LGT I + T+ G+ L+ L P+ +++K ++ + ++
Sbjct: 163 LGLIQAMSFIND-PEQLGTGIATAFIATIYGVGLANLLFLPMANKLKQRVEQKMLYHEML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ +IA G P ERP
Sbjct: 222 AEGVIAISQGESPINIELKLEAY--RVERP 249
>gi|107026972|ref|YP_624483.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116691832|ref|YP_837365.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|105896346|gb|ABF79510.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116649832|gb|ABK10472.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
Length = 254
Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 101/259 (38%), Gaps = 24/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+
Sbjct: 3 LLTLVGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQ 62
Query: 61 LLEIF-GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L F + + + D+L K E+ ++
Sbjct: 63 LRLAFVRAREVDRKNLSDLL----EWGDRAKLDGLLAFES-----------------MDV 101
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ + F + ++ G + + +E+ + E+D +L G P GI+G
Sbjct: 102 SGIHPFARRGLELLANGVSTA-VLEDALQRELDAYERSRLAAVRVWQQAGGYAPTFGILG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + R
Sbjct: 161 SVLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSEMRFRK 219
Query: 240 IVKKALIAYMNGAIPQVAI 258
+ L+A P
Sbjct: 220 LYLDGLLAISRKESPHTIE 238
>gi|78063206|ref|YP_373114.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77971091|gb|ABB12470.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
Length = 254
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 100/259 (38%), Gaps = 24/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+
Sbjct: 3 LLTLAGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQ 62
Query: 61 LLEIF-GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L F + + + D+L K E+ ++
Sbjct: 63 LRLAFVRAREVDRKNLSDLL----EWGDRAKLDGLLAFES-----------------MDV 101
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ + F + ++ G + + +E+ + E+D +L G P GI+G
Sbjct: 102 SGIHPFARRGLELLANGVSTA-VLEDALQRELDAYERSRLAAARVWQQAGGYAPTFGILG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + R
Sbjct: 161 SVLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFRK 219
Query: 240 IVKKALIAYMNGAIPQVAI 258
+ L+A P
Sbjct: 220 LYLDGLLAISRKESPHTIE 238
>gi|170693361|ref|ZP_02884521.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170141891|gb|EDT10059.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 254
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GG+ L+Q VIV G LG ++ N D
Sbjct: 3 LLTVFGVVFGVAAIVAGFSLEGGDFTSLLQLEAFVIVLGGTLGAVMIQNTWARFYDGVKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + L +L K E+ ++
Sbjct: 63 LRFAF---VKARQVDRESLSVLLEWGDQAKLNGMLAFES-----------------IDAK 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ F + ++ G + + +E+ + E+D + G P GI+GA
Sbjct: 103 GISPFAKRGLELLANGVSTA-VLEDALQREVDAYERNCMAAARIWQQAGGYAPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ G++ + P LG I V+ TL G+ L+ + PL+ +I++ + R +
Sbjct: 162 VLGLIQVTGHMLE-PSQLGKGIAVAFVATLYGLGLANLVFLPLSGKIRAQVDSELRFRRL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|224534324|ref|ZP_03674902.1| chemotaxis protein MotA [Borrelia spielmanii A14S]
gi|224514426|gb|EEF84742.1| chemotaxis protein MotA [Borrelia spielmanii A14S]
Length = 261
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I + ++ + +K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSFSALMASSEVIAVKKIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++K+L L +K ++ ++ +
Sbjct: 63 LGFFFRRNSHAK---ISIIKILVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G+ G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + LG+++ V+L TL G I++ + P+ +++ ++ + +
Sbjct: 162 LIGLVALLGNL-EDKSALGSSMAVALITTLYGTIMANLMFIPVQLKLEKIDSEEAAVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G P++ + L +R
Sbjct: 221 IIEGVLSIQSGDNPRILEQKLMTFLTPKDR 250
>gi|77164351|ref|YP_342876.1| flagellar motor protein PomA [Nitrosococcus oceani ATCC 19707]
gi|254434685|ref|ZP_05048193.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
gi|76882665|gb|ABA57346.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|207091018|gb|EDZ68289.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
Length = 256
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + ++GG +G + + P ++IV G +M S
Sbjct: 3 LATLLGLIGSFG-VVGGAILLGSSVLVFFNPPSLLIVLGGTTAVVLMKFSFSQFLGSFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K + +++K + +K E I
Sbjct: 62 GMKAFLHKPEKPE---EIIKQAVDMAGTARKEGLLALEG-------WEIKN--------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + ++ E+ L +G+ PA+G++G
Sbjct: 103 ---EFMKKGVTLLVDGH-DPEIVRRVLMTELRQTLSRHELGQKIFKAIGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + ++ PK +G A+ V+L TL G +++ + P ++ ++ I
Sbjct: 159 LIGLVQMLSSMDD-PKKIGPAMAVALLTTLYGAMIANMVALPFADKLALRSNEERLNRSI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++++ G P+V E +P S+R
Sbjct: 218 IIESILSIQQGHNPRVLEELLLTFMPGSKR 247
>gi|328948406|ref|YP_004365743.1| MotA/TolQ/ExbB proton channel [Treponema succinifaciens DSM 2489]
gi|328448730|gb|AEB14446.1| MotA/TolQ/ExbB proton channel [Treponema succinifaciens DSM 2489]
Length = 260
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 109/274 (39%), Gaps = 22/274 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG F + + G + GG+ +I I + G + P+ I
Sbjct: 3 LATLIGFFGGLAMMAVGVFTSGGSIMGIIDIPSIFVTIGGSYFSLWICAPMNQIIGLFGI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F G+ T ++ + L ++ E +DD +
Sbjct: 63 MGRAFKTYDYGEKT---TVQNMVALSEKARREGILALEEGLDDLDD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +R+++ GN S I ++++ E+ + + + P G++G
Sbjct: 106 ---PFLKEGLRLMVDGNDGS-AIRSILENEMAQAESRHMSWINVVIQWAGFAPGYGMMGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL + LG + V+L TL G +L+ L PL ++ + + +
Sbjct: 162 VIGLIGMLRNL-EDKSALGPNMAVALITTLYGSMLANWLFGPLAQKLIMQNGNEMNVKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + +++ G P++ + L R +IE
Sbjct: 221 VLEGILSIQAGDNPRILGQKLLTYLDPKSRKAIE 254
>gi|126173598|ref|YP_001049747.1| flagellar motor protein PomA [Shewanella baltica OS155]
gi|152999878|ref|YP_001365559.1| flagellar motor protein PomA [Shewanella baltica OS185]
gi|160874503|ref|YP_001553819.1| flagellar motor protein PomA [Shewanella baltica OS195]
gi|125996803|gb|ABN60878.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|151364496|gb|ABS07496.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|160860025|gb|ABX48559.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315266741|gb|ADT93594.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 255
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 110/271 (40%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I+G GG I + I+IV G +M LK +
Sbjct: 3 LATVIGIVGAFGFILGAMATSGG-LMIFVDVPSILIVFGGSFFVVMMKFNLKQFFSAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + D+++ + +KG E
Sbjct: 62 AAKAFIFKIDKPE---DLIEQSVTMADAARKGGFLALEEA-------------------Q 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + ++++I + G+ PA+G++G
Sbjct: 100 ITNSFMQKAVDMLVDGH-DGEVVRAALEKDIALTEERHRTGIGIFRAFGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G ++ V+L TL G +++ +C P+ ++ ++ +
Sbjct: 159 LVGLVAMLSNMSD-PKSIGPSMAVALLTTLYGAMVANMVCLPIADKLTLRMGEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + L R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLAEKNRK 248
>gi|229019730|ref|ZP_04176536.1| hypothetical protein bcere0030_42310 [Bacillus cereus AH1273]
gi|229025956|ref|ZP_04182346.1| hypothetical protein bcere0029_42440 [Bacillus cereus AH1272]
gi|228735357|gb|EEL85962.1| hypothetical protein bcere0029_42440 [Bacillus cereus AH1272]
gi|228741575|gb|EEL91769.1| hypothetical protein bcere0030_42310 [Bacillus cereus AH1273]
Length = 266
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 57/278 (20%), Positives = 115/278 (41%), Gaps = 20/278 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG+ + ++ ++ G G + L+ P +I+ +A P+ +K
Sbjct: 6 ATIIGIILGVVAVVVGMVVKGADIMALMNPAAALIIFVGTFAAVCIAFPMNQLKRFPKLF 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+FG ++ +L+L +K E +D +
Sbjct: 66 KVLFGSNKKDL-SHEQLLELFVHWTSESRKYGILSLEQQLDKIED--------------- 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ M+ +I G + ++E +++ E++ I K S G P +G++GA+
Sbjct: 110 --EFLLRGMKFVIDG-VSAEDLEQILEAELEAIEERHAKGAAIFSQAGTYAPTLGVLGAV 166
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ A+GNL+ + LG AI + T+ GI Y L +P +++K + ++
Sbjct: 167 IGLVAALGNLTD-IEKLGHAISGAFIATIFGIFSGYVLWHPFANKLKQKSAAELEKKRLI 225
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
L+ G P + L +ER +E A++
Sbjct: 226 IDCLLMLQEGTYPFIMKNRILGALSATERKKLEKGAEK 263
>gi|262274768|ref|ZP_06052579.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
gi|262221331|gb|EEY72645.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
Length = 253
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I+ GG + + +IV G L +M L +
Sbjct: 3 LATLIGILGAFAFIVMAMLL-GGTISMFVDVPSTLIVFGGSLFVVLMNYTLGQFFGAFKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DDPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF+ M++ G+ + ++ + ++I + + + + PA+G++G
Sbjct: 100 VPNTFMKKGGDMLVDGH-DAEVVKMTLQKDITMTDERHDAGAQFYTALADVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +L+ + P+ ++++ + ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAMLANMVAIPIANKLRLRKDQEKMNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ L+A +G P+V Y + L +R
Sbjct: 218 IMDGLLAIQDGQNPRVIDGYLKNYLNEKKR 247
>gi|238024906|ref|YP_002909138.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237879571|gb|ACR31903.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
Length = 254
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 22/257 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I GF GG+ LIQ VIV G LG ++ N D
Sbjct: 3 LLTLFGVVFGVAAIAAGFTLEGGHFASLIQLQAFVIVLGGTLGAVMIQNTWSRFFDGVKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F L +L K E+ ++
Sbjct: 63 LRLAFVKVRPVDQ---QSLAVLLEWGDQAKLNGMMAFES-----------------IDTA 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ F + ++ G + + +E+ + E+D + G P GI+GA
Sbjct: 103 GISPFAKRGLELLANGVSTA-VLEDALQRELDAYQRNHMTAARIWQQAGGYAPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ ++ + P LG I V+ TL G+ L+ + P+ +I++ + R +
Sbjct: 162 VLGLIQVTSHMLE-PAQLGQGIAVAFVATLYGLALANLVFLPIHGKIRAQIESEMRFQTL 220
Query: 241 VKKALIAYMNGAIPQVA 257
+ L+A P
Sbjct: 221 YRDGLLAISRKESPHTI 237
>gi|170700357|ref|ZP_02891368.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|171318848|ref|ZP_02907984.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|170134744|gb|EDT03061.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|171095947|gb|EDT40883.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 254
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+
Sbjct: 3 LLTLAGVVLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F Q+ L L K E+ ++ +
Sbjct: 63 LRLAF---VRAQEVDRKHLTDLLEWGDRAKLDGLLAFES-----------------MDVS 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + +E+ + E+D +L G P GI+G+
Sbjct: 103 GIHPFARRGLELLANGVSTA-VLEDALHRELDAYERSRLAAARVWQQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + R +
Sbjct: 162 VLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFRKL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|59711321|ref|YP_204097.1| flagellar motor protein PomA [Vibrio fischeri ES114]
gi|197334887|ref|YP_002155477.1| chemotaxis protein PomA [Vibrio fischeri MJ11]
gi|59479422|gb|AAW85209.1| flagellar motor protein MotA1 [Vibrio fischeri ES114]
gi|197316377|gb|ACH65824.1| chemotaxis protein PomA [Vibrio fischeri MJ11]
Length = 254
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 115/270 (42%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + II GG I + ++IV G + +M + +G
Sbjct: 3 LATLIGLVGSFAFIIMAMVLAGG-LAIFMDTTSVLIVVGGSIFVVLMKFTVGQFFGAGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D D++ + + +KG E E
Sbjct: 62 AGKAFIFKT---DEPVDLIVTIVEMADAARKGGFLALE-------------------EKE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + ++ + ++I + + + G+ PA+G++G
Sbjct: 100 ISNSFMQKGIDLLVDGH-DAEVVKATLQKDIALTNERHERGVGVFTAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ++S + P+ +++ + ++ +
Sbjct: 159 LVGLVGMLSNMDD-PKSIGPAMAVALLTTLYGSVISNMVAFPIAHKLELRKEQEKLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y R L +R
Sbjct: 218 ILDGILAIQDGQNPRVIDSYLRNYLNEKKR 247
>gi|167770208|ref|ZP_02442261.1| hypothetical protein ANACOL_01551 [Anaerotruncus colihominis DSM
17241]
gi|167667530|gb|EDS11660.1| hypothetical protein ANACOL_01551 [Anaerotruncus colihominis DSM
17241]
Length = 279
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 103/271 (38%), Gaps = 20/271 (7%)
Query: 2 STIIGLFITILCIIGGFY--AMGG----NPYILIQPFEIVIVAGAGLGGFVMANPLKVIK 55
+++G I I+ G A G N I +V G + +++ P + K
Sbjct: 4 LSVLGWLGGIGVILFGIVFDADTGIVWENLKNFYDAPSIAVVLGGVIVALMVSFPFSIFK 63
Query: 56 DSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT 115
L I Y + + L + E +
Sbjct: 64 KIPRHLKIILFPTKFVPQDY---ISQIVELATEARINGLLSLEGKL---------QDDGD 111
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
+ + F+ + M M+IV +++ L++ E+D + + PA
Sbjct: 112 KKKGKKSDPFLRNSM-MLIVDAVDPEKVKTLLETELDYLDERHAQDRAFYDKASAYAPAF 170
Query: 176 GIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
G++G ++G+I + +L P + A+ ++L T G ILS + P++++++ +++
Sbjct: 171 GMIGTLMGLINLLKSLDD-PDAIAPAMALALVTTFYGTILSNLIFTPISNKLRVRHEEEY 229
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLP 266
+IV + + A G P+ E +++P
Sbjct: 230 LCKMIVVEGVQAIQAGDNPKFIEEKLTQLIP 260
>gi|1185053|gb|AAB58962.1| flagellar motor apparatus [Borrelia burgdorferi]
Length = 260
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I + ++ + +K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSFSALMASSEVVAVKKIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++K+L L +K ++ ++ +
Sbjct: 63 LGFFFRRNSYAK---VSIIKILVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G+ G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEVIRTMLYLELDQMQERHKVGSDLFKTSRKLAPAFGMTGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GNL + LG+++ V+L TL G I++ + P+ +++ ++ + +
Sbjct: 162 LIGLVALLGNL-EDKSALGSSMAVALITTLYGTIMANLMFTPVQLKLEKIDTEEAAVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ +G P++ + L +R
Sbjct: 221 IIEGVLSIQSGDNPRILEQKLMTFLTPKDR 250
>gi|217974158|ref|YP_002358909.1| flagellar motor protein PomA [Shewanella baltica OS223]
gi|304409469|ref|ZP_07391089.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307303827|ref|ZP_07583580.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|217499293|gb|ACK47486.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|304351987|gb|EFM16385.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306912725|gb|EFN43148.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 255
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 110/271 (40%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I+G GG I + I+IV G +M LK +
Sbjct: 3 LATVIGIVGAFGFILGAMATSGG-LMIFVDVPSILIVFGGSFFVVMMKFTLKQFFGAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + D+++ + +KG E
Sbjct: 62 AAKAFIFKIDKPE---DLIEQSVTMADAARKGGFLALEEA-------------------Q 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + ++++I + G+ PA+G++G
Sbjct: 100 ITNSFMQKAVDMLVDGH-DGEVVRAALEKDIALTEERHRTGIGIFRAFGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G ++ V+L TL G +++ +C P+ ++ ++ +
Sbjct: 159 LVGLVAMLSNMSD-PKSIGPSMAVALLTTLYGAMVANMVCLPIADKLTLRMGEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + L R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLAEKNRK 248
>gi|261212058|ref|ZP_05926344.1| Flagellar motor rotation protein MotA [Vibrio sp. RC341]
gi|262402759|ref|ZP_06079320.1| Flagellar motor rotation protein MotA [Vibrio sp. RC586]
gi|260838666|gb|EEX65317.1| Flagellar motor rotation protein MotA [Vibrio sp. RC341]
gi|262351541|gb|EEZ00674.1| Flagellar motor rotation protein MotA [Vibrio sp. RC586]
Length = 254
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 113/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + +I GG+ + + ++IV G + +M + +G
Sbjct: 3 LATLIGLIGGMAFVIMAMVL-GGSLMMFVDTVSVLIVVGGAVFVVMMKFTMGQFFGAGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AAKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + + + ++I + K G+ PA+G++G
Sbjct: 100 IPNPFMQKGIDLLVDGH-DADVVRATLQKDIALTDERHSKGTQVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNAGKR 247
>gi|52081473|ref|YP_080264.1| flagellar motor protein MotP [Bacillus licheniformis ATCC 14580]
gi|52786849|ref|YP_092678.1| flagellar motor protein MotP [Bacillus licheniformis ATCC 14580]
gi|52004684|gb|AAU24626.1| flagellar motor apparatus protein [Bacillus licheniformis ATCC
14580]
gi|52349351|gb|AAU41985.1| YtxD [Bacillus licheniformis ATCC 14580]
Length = 272
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 24/252 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+G+FI +L ++ G G Y I IV G ++ K +K + L +
Sbjct: 13 ILGIFILVLGVVSGAGLSG--FYSFIDLTSFFIVTGGLCAAVFISFSPKDLKRAPAVLKQ 70
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + D +++K L +K + ++ N
Sbjct: 71 VFISEE---DDVRELVKTFVSLSEQARKQGILSLDANV-----------------NEMKD 110
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ + + I G I N+M+ EI + K GE PA G++G ++G
Sbjct: 111 PFLKKGLLLAIDGW-DEETIRNVMNSEIAAMEERHRKGRRIFEKAGEFAPAWGMIGTLVG 169
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ + NL++ P+ LG + ++L TL G +L+ L P+ ++++ + ++ +
Sbjct: 170 LVMMLKNLNK-PETLGPNMAIALLTTLYGSLLANMLFIPIAAKLEEKTENEIFKKQVMIE 228
Query: 244 ALIAYMNGAIPQ 255
+I +G P+
Sbjct: 229 GIIGIQSGRNPR 240
>gi|319647378|ref|ZP_08001600.1| YtxD protein [Bacillus sp. BT1B_CT2]
gi|317390725|gb|EFV71530.1| YtxD protein [Bacillus sp. BT1B_CT2]
Length = 272
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 24/252 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+G+FI +L ++ G G Y I IV G ++ K +K + L +
Sbjct: 13 ILGIFILVLGVVSGAGLSG--FYSFIDLTSFFIVTGGLCAAVFISFSPKDLKRAPAVLKQ 70
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + D +++K L +K + ++ N
Sbjct: 71 VFISEE---DDVRELVKTFVSLSEQARKQGILSLDANV-----------------NEMKD 110
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ + + I G I N+M+ EI + K GE PA G++G ++G
Sbjct: 111 PFLKKGLLLAIDGW-DEETIRNVMNSEIAAMEERHRKGRRIFEKAGEFAPAWGMIGTLVG 169
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ + NL++ P+ LG + ++L TL G +L+ L P+ ++++ + ++ +
Sbjct: 170 LVMMLKNLNK-PETLGPNMAIALLTTLYGSLLANMLFIPIAAKLEEKTENEIFKKQVMIE 228
Query: 244 ALIAYMNGAIPQ 255
+I +G P+
Sbjct: 229 GIIGIQSGRNPR 240
>gi|91781367|ref|YP_556574.1| putative flagellar motor protein (MotA) [Burkholderia xenovorans
LB400]
gi|91694027|gb|ABE37224.1| putative flagellar motor protein (MotA) [Burkholderia xenovorans
LB400]
Length = 254
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 97/258 (37%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ TI+G + I+ GF GG+ L Q VIV G LG ++ N D
Sbjct: 3 LLTILGAVFGLSAIVAGFSLEGGHFTSLFQLEAFVIVLGGTLGAVMIQNTWARFYDGVKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + L +L K E+ ++
Sbjct: 63 LRFAF---VKARQVDRESLSVLLEWGDQAKLNGMLAFES-----------------IDAR 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + +E+ + E+D ++ G P GI+GA
Sbjct: 103 GINPFAKRGLELLANGVSTA-VLEDALQRELDAYERNRMAAARIWQQAGGYSPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ G++ + P LG I V+ TL G+ L+ + PL +I++ + R +
Sbjct: 162 VLGLIQVTGHMLE-PSQLGQGISVAFVATLYGLALANLVFLPLHGKIRAQVDSELRFRRL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|317011032|gb|ADU84779.1| flagellar motor protein MotA [Helicobacter pylori SouthAfrica7]
Length = 257
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+GL + I I G GNP +I ++I+ L + + +K +
Sbjct: 3 LSTILGLVLAIASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + + +K L L +K E + +
Sbjct: 63 IKIVFLNPKINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + + MII G ++ ++ I+ + H GE+ P +G+VGA
Sbjct: 106 ---DFTRNGLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L +P + I + T T+ GI+ +Y+L P ++K+ + +
Sbjct: 162 VMGLMLALQKL-DNPAEMAAGIAGAFTATVTGIMCAYALFGPFGHKLKAKSKDIIKEKTV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++ NG P+ + E
Sbjct: 221 LLEGILGIANGENPRDLENKLLNYIAPGE 249
>gi|317133448|ref|YP_004092762.1| MotA/TolQ/ExbB proton channel [Ethanoligenens harbinense YUAN-3]
gi|315471427|gb|ADU28031.1| MotA/TolQ/ExbB proton channel [Ethanoligenens harbinense YUAN-3]
Length = 266
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 21/253 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ IIGL + ++ GF GG L++ +IV G +G ++ P+ IK +
Sbjct: 3 ITLIIGLVVAFGGVLMGFTQEGGVLTNLLKLPAFMIVVGGTIGSAFISFPIANIKRIPGA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ K Y ++ ++ + ++ E+ +
Sbjct: 63 FKTMMFQKKH---DYPKLIDMMCEIANKARRDGLLSLESE-----------------ADK 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI + I G A ++ L++ EI+ + MG + P +G++G
Sbjct: 103 IKDPFIKKGLGYIADG-ADPEFLKQLLNNEIEANFKNVEDAAKVMEGMGGTSPTMGVLGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+ +G++ +GT I + T+ G+ + + PL +Q+K T + + I
Sbjct: 162 VMGMTTVLGHMGSDTSKIGTEIAGAFIATMYGVGIGNLIWLPLGNQMKVTAMHEAEHQEI 221
Query: 241 VKKALIAYMNGAI 253
V + L+A G
Sbjct: 222 VMEGLMAIQAGEP 234
>gi|331006558|ref|ZP_08329850.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
gi|330419627|gb|EGG94001.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
Length = 251
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 109/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + I+ G + + + +VIV G + L G
Sbjct: 3 LATLIGIIGAMALIVVTMMLSG-DITMFVNVPSLVIVFGGTFTAVMAKYGLSQYLGFGKM 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F G D++ + L +KG E
Sbjct: 62 IGKSFKG---GDVNLADLIDEIVALADEARKGGLLALEG-------------------KE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ +++++ G+ ++ ++ +E ++M PA+G++G
Sbjct: 100 VSSDFLGKGIQLLVDGH-EPDVVKGILSKEKTEAEKRHAVGASIFTNMASMAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G A+ V+L TL G +L+ C+P+ +++ L +
Sbjct: 159 LIGLVAMLANMSD-PKSIGPAMAVALLTTLYGAVLANGFCDPIAAKLTLKAKNDVLLKNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V AL+A NG P+V R LP +R
Sbjct: 218 VIDALLAIQNGQNPRVIDSMLRNYLPEGKR 247
>gi|298529616|ref|ZP_07017019.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511052|gb|EFI34955.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 252
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 105/270 (38%), Gaps = 25/270 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T G+ + IIG + GG + ++IV G + + P+ I + +
Sbjct: 4 ATFFGIIVGFSLIIGAIFI-GGAVDTFVNVPGVMIVLGGTMAATSINFPVTDINKAFRAA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
IF K++ + DV+ + + ++ EN NST+ +
Sbjct: 63 FYIFAGKSVTAN---DVVNTMVRIAEISRRDGLLALENI--KTENSTLKKA--------- 108
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+I N I + EI + MG P+ G++G +
Sbjct: 109 ---------CQLIADNTDPETISQTLRIEIVALRNRHAVIQDVFKKMGTYAPSFGMIGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ + + P +G A+ V++ T G +L+ L P+ ++KS +++ I+
Sbjct: 160 IGLVQML-TMLDDPASIGPAMAVAILTTFYGALLATLLFLPIAGKLKSRTQQENLHLEII 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ + + P+V E +P +ER
Sbjct: 219 FQGAQSILENNNPRVVYEKLSSFVPPAERK 248
>gi|209694504|ref|YP_002262432.1| flagellar motor protein PomA [Aliivibrio salmonicida LFI1238]
gi|208008455|emb|CAQ78621.1| sodium-driven polar flagellar protein MotA [Aliivibrio salmonicida
LFI1238]
Length = 254
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 115/270 (42%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + II GG I + ++IV G + +M + +G
Sbjct: 3 LATLIGLVGSFAFIIMAMVLAGG-LAIFMDVTSVLIVFGGSIFVVLMKFTVGQFFGAGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D D++ + + +KG E E
Sbjct: 62 AAKAFIFKT---DEPVDLIVTIVEMADAARKGGFLALE-------------------EKE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + ++ + ++I + K + G+ PA+G++G
Sbjct: 100 ISNSFMQKGIDLLVDGH-DAEVVKATLQKDIALTNERHEKGIGVFTAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ++S + P+ +++ + ++ +
Sbjct: 159 LIGLVGMLSNMDD-PKSIGPAMAVALLTTLYGSVISNMIAFPIAHKLELRKEQEKLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y R L +R
Sbjct: 218 ILDGILAIQDGQNPRVIDSYLRNYLNEKKR 247
>gi|116619473|ref|YP_821629.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
gi|116222635|gb|ABJ81344.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
Length = 303
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/278 (18%), Positives = 107/278 (38%), Gaps = 23/278 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ G+ + + IIGG G+ + Q +IV G G ++ P+ ++ +
Sbjct: 30 LATLGGIGLALSGIIGGLILEKGSISDVAQGTAAMIVLGGTFGAVLVTTPMAIVVRAFKG 89
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F +A D + ++ L +K E + +
Sbjct: 90 LGAVFFERA---DGMTETIEALIGYAGKARKHGIVSLEGDASEIAD-------------- 132
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + + + G E+ +M+ +I + + G P IGI+GA
Sbjct: 133 ---PFLRKALNLAVDGTDM-QELRKMMEIDIALSEHAAESEARVWDSAGGYAPTIGIIGA 188
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ M +L + K +G I V+ T+ G+ L+ P +++K+ +
Sbjct: 189 VMGLIQVMKHL-EDIKEVGHGIAVAFVATVYGVGLANIFFLPAANKLKARMRASSLRKDM 247
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL-PLSERPSIEIVA 277
V + +I + G P + +ER +
Sbjct: 248 VLEGVIGIVEGLNPTLIRMKLEAYQEEPAERKKTKAPE 285
>gi|302387786|ref|YP_003823608.1| MotA/TolQ/ExbB proton channel [Clostridium saccharolyticum WM1]
gi|302198414|gb|ADL05985.1| MotA/TolQ/ExbB proton channel [Clostridium saccharolyticum WM1]
Length = 271
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 101/273 (36%), Gaps = 26/273 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S I+G + I+ II G I ++IV G + + + P KV+
Sbjct: 3 ISLIVGWVLGIVLIIYGIGLQ--KMGNFIDIPSVIIVVGGTIAALIASYPFKVLAQVPKH 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + K + D L + +K E N
Sbjct: 61 IGIMLSPKKYNAEKVIDT---LVEMAKTARKKGLLVLEEQ-----------------ANG 100
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M+IV + +I +++ E+ + + PA G++G
Sbjct: 101 IKDPFLKQSI-MLIVDAMDAEKIREMLESEVAAMSERHDQDVSMYEKGTSVAPAFGMIGT 159
Query: 181 ILGIIKAMGNL---SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
++G++ + ++ S S LG + V+L T G +L++ L P+ +++ ++
Sbjct: 160 LVGLVNMLKSMNMDSGSANSLGADMSVALITTFYGCVLAHLLFGPMAKKLRIRNDEELLY 219
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + +++ G P+ E L ++
Sbjct: 220 KQIIIEGVLSIQAGDNPKYLEEKLLSYLSQGQQ 252
>gi|229827390|ref|ZP_04453459.1| hypothetical protein GCWU000182_02778 [Abiotrophia defectiva ATCC
49176]
gi|229788328|gb|EEP24442.1| hypothetical protein GCWU000182_02778 [Abiotrophia defectiva ATCC
49176]
Length = 265
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/281 (18%), Positives = 109/281 (38%), Gaps = 32/281 (11%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYI---LIQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
++T++GL I++ ++ NP + +I G ++ K I +
Sbjct: 6 IATLLGLVISLGLVLFSIMMN--NPAAIFGFLDLPSALITFGGAF--MIVLASCKNIGEF 61
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH---IDDPYNSTIFTSIP 114
L +V+K + L +K E I+DP
Sbjct: 62 VGGLKSFGLTLKPVNFNQSEVIKGIINLSNIARKDGLLALEEASQNIEDP---------- 111
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
F+ + ++IV + +++ EI I + + PA
Sbjct: 112 ----------FLKKGI-LLIVDGTDPELVRGILETEISCIEDRHKAKFGFWETLAAMGPA 160
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G++G ++G++ + NLS P +G A+ ++L T G L+ +C P+T+++K ++
Sbjct: 161 WGMIGTLIGLVNMLANLSD-PSAIGPAMAIALITTFYGSFLANWMCAPVTNKLKGNSAEE 219
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
L I+ + +++ G P+V E + L +ER +
Sbjct: 220 IMLKGIMVEGILSIQAGENPRVIEEKLKSFLTPAEREAFSE 260
>gi|254779212|ref|YP_003057317.1| flagellar motor protein MotA [Helicobacter pylori B38]
gi|254001123|emb|CAX29078.1| Chemotaxis protein MotA (Motility protein A); putative membrane
protein [Helicobacter pylori B38]
Length = 257
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+GL + + I G GNP +I ++I+ L + + +K +
Sbjct: 3 LSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + + +K L L +K E + +
Sbjct: 63 IKIVFLNPKINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + + MII G ++ ++ I+ + H GE+ P +G+VGA
Sbjct: 106 ---DFTRNGLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L +P + I + T T+ GI+ +Y++ P ++K+ + +
Sbjct: 162 VMGLMLALQKL-DNPAEMAAGIAGAFTATVTGIMCAYAIFGPFGHKLKAKSKDIIKEKTV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++ NG P+ + E
Sbjct: 221 LLEGILGIANGENPRDLENKLLNYIAPGE 249
>gi|146306331|ref|YP_001186796.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145574532|gb|ABP84064.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
Length = 255
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 118/270 (43%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL ++ +IG +G + + ++IV L ++ +
Sbjct: 3 LATLIGLVGALV-VIGAAIILGASSEVFFNVPSLLIVVVGSLFVVLVKFSFGQFLGAFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F ++ ++ + + + +K E +
Sbjct: 62 VARAFRFRLPSVES---CIGEMVEIAQVARKEGVLALEGR-------------------D 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ ++++I G + I +++E + L + S MG+ PA+G++G
Sbjct: 100 FSSPFLSAGVQLMIDGQGQD-TIRAFLEKERVLTLERNREGAKVFSAMGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+ + PK +G A+ V+L TL G +++ +C PL ++ ++ R+ +
Sbjct: 159 LVGLVQMLSNM-EDPKSIGPAMAVALLTTLYGAMMATMICLPLADKLSLRSSEEARMQAL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
AL+A +G P++ + + LP S+R
Sbjct: 218 WIDALLAIQDGVNPRIIEQMLKSYLPPSKR 247
>gi|117921339|ref|YP_870531.1| flagellar motor protein PomA [Shewanella sp. ANA-3]
gi|117613671|gb|ABK49125.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 255
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 110/271 (40%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL I+ GG I I + IV G +M LK +
Sbjct: 3 LATVIGLVGGFGFILWAMMTSGG-LAIFIDVPSVFIVFGGSFFVVMMKFNLKQFLGAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K + D+++ + +KG E
Sbjct: 62 AVKAFMFKIDKPE---DLIEQSVTMADAARKGGFLALEEA-------------------Q 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + ++++I + G+ PA+G++G
Sbjct: 100 ISNSFMQKAVDMLVDGH-DGEVVRAALEKDIALTEERHRNGIAIFRAFGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G ++ V+L TL G +++ +C P+ ++ ++ +
Sbjct: 159 LVGLVAMLSNMSD-PKSIGPSMAVALLTTLYGAVVANMVCIPIADKLTLRMGEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + L +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLAEKQRK 248
>gi|222100884|ref|YP_002535452.1| Motility protein A [Thermotoga neapolitana DSM 4359]
gi|221573274|gb|ACM24086.1| Motility protein A [Thermotoga neapolitana DSM 4359]
Length = 256
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 117/277 (42%), Gaps = 22/277 (7%)
Query: 6 GLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF 65
GL + I + G GG+ I + I + ++A+P + + +F
Sbjct: 2 GLALVIAALFIGIATGGGDFAAFINIPSLFITVVGSIAATMVAHPKD---RAFRIINIMF 58
Query: 66 GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTF 125
+ + +++ + ++ E +++ + F
Sbjct: 59 STLREPKIDHTSLIQTMVSFSEKARREGLLSLEENLESIED-----------------PF 101
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ +++++ G ++N+M+ E+++ E + G PA G++G ++G+I
Sbjct: 102 MKKALQLVVDGT-DPDLLKNMMETELELFEEELDGERAVLESAGAYAPAFGMIGTLIGLI 160
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ + +L+ +P+ LG ++ V+L TL G IL+ + P+ +IK R ++ +A+
Sbjct: 161 QMLKSLN-NPETLGPSMAVALITTLYGAILANGVFLPMAEKIKKRRDILVMEKRMILEAV 219
Query: 246 IAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
++ G P++ E + LP E+ + E +QE
Sbjct: 220 LSIQAGENPRILEEKLKSFLPEKEKRAYEAASQEAAA 256
>gi|120599625|ref|YP_964199.1| flagellar motor protein PomA [Shewanella sp. W3-18-1]
gi|146292381|ref|YP_001182805.1| flagellar motor protein PomA [Shewanella putrefaciens CN-32]
gi|120559718|gb|ABM25645.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|145564071|gb|ABP75006.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|319425681|gb|ADV53755.1| stator-force generator of Na+ coupled flagellar motor, PomA
[Shewanella putrefaciens 200]
Length = 255
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 110/271 (40%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL I+G GG I I IV G +M LK +
Sbjct: 3 LATLIGLVGAFAFILGAMVTSGG-LMIFFDVPSIFIVFGGSFFVVMMKFNLKQFFSAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K + ++++ + +KG E
Sbjct: 62 AVKAFMFKIDKPE---ELIEQSVTMADAARKGGFLALEEA-------------------Q 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + ++++ID+ G+ PA+G++G
Sbjct: 100 ISNSFMQKAVDMLVDGH-DGEVVRAALEKDIDLTEERHRNGIAIFRAFGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G A+ V+L TL G +L+ + P+ ++ ++ +
Sbjct: 159 LVGLVAMLSNMSD-PKSIGPAMAVALLTTLYGAMLANMVAIPIADKLSLRMGEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + L +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLAEKQRK 248
>gi|308184600|ref|YP_003928733.1| flagellar motor protein MotA [Helicobacter pylori SJM180]
gi|308060520|gb|ADO02416.1| flagellar motor protein MotA [Helicobacter pylori SJM180]
Length = 257
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 107/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+GL + + I G GNP +I ++I+ L + + + +K +
Sbjct: 3 LSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTSTHARYVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + + +K L L +K E + +
Sbjct: 63 IKIVFLNPKINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + + MII G ++ ++ I+ + H GE+ P +G+VGA
Sbjct: 106 ---DFTRNGLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L +P + I + T T+ GI+ SY++ P ++K+ + +
Sbjct: 162 VMGLMLALQKL-DNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++ NG P+ + E
Sbjct: 221 LLEGILGIANGENPRDLENKLLNYIAPGE 249
>gi|261839370|gb|ACX99135.1| flagellar motor protein MotA [Helicobacter pylori 52]
gi|297380014|gb|ADI34901.1| Chemotaxis protein motA [Helicobacter pylori v225d]
Length = 257
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+GL + + I G GNP +I ++I+ L + + +K +
Sbjct: 3 LSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + + +K L L +K E + +
Sbjct: 63 IKIVFLNPKINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + + MII G ++ ++ I+ + H GE+ P +G+VGA
Sbjct: 106 ---DFTRNGLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L +P + I + T T+ GI+ SY++ P ++K+ + +
Sbjct: 162 VMGLMLALQKL-DNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++ NG P+ + E
Sbjct: 221 LLEGILGIANGENPRDLENKLLNYIAPGE 249
>gi|153835782|ref|ZP_01988449.1| chemotaxis protein PomA [Vibrio harveyi HY01]
gi|148867500|gb|EDL66862.1| chemotaxis protein PomA [Vibrio harveyi HY01]
Length = 253
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG+ + + I+IV G +M + +
Sbjct: 3 LATLIGLIGGFAFVIMAMVL-GGSIGMFVDVTSILIVVGGSAFVVLMKFTMGQFFGATKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + + G+ PA+G++G
Sbjct: 100 INNSFMQKGIDLLVDGH-DADVVRAALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAVLSNMVFFPIADKLSLRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|156973486|ref|YP_001444393.1| flagellar motor protein PomA [Vibrio harveyi ATCC BAA-1116]
gi|156525080|gb|ABU70166.1| hypothetical protein VIBHAR_01176 [Vibrio harveyi ATCC BAA-1116]
Length = 253
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG+ + + I+IV G +M + +
Sbjct: 3 LATLIGLIGGFAFVIMAMVL-GGSIGMFVDVTSILIVVGGSAFVVLMKFTMGQFFGATKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + + G+ PA+G++G
Sbjct: 100 INNSFMQKGIDLLVDGH-DADVVRAALQKDIALTDERHTQGTGVFRAFGDVTPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAVLSNMVFFPIADKLSLRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|317177354|dbj|BAJ55143.1| flagellar motor protein MotA [Helicobacter pylori F16]
gi|317182127|dbj|BAJ59911.1| flagellar motor protein MotA [Helicobacter pylori F57]
Length = 257
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+GL + I I G GNP +I ++I+ L + + +K +
Sbjct: 3 LSTILGLVLAIASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + + +K L L +K E + +
Sbjct: 63 IKIVFLNPKINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + + MII G ++ ++ I+ + H GE+ P +G+VGA
Sbjct: 106 ---DFTRNGLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L +P + I + T T+ GI+ SY++ P ++K+ + +
Sbjct: 162 VMGLMLALQKL-DNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++ NG P+ + E
Sbjct: 221 LLEGILGIANGENPRDLENKLLNYIAPGE 249
>gi|149178719|ref|ZP_01857302.1| chemotaxis pomA protein [Planctomyces maris DSM 8797]
gi|148842417|gb|EDL56797.1| chemotaxis pomA protein [Planctomyces maris DSM 8797]
Length = 259
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 22/249 (8%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
G + I +V G + +A P + L ++F K Q V+
Sbjct: 25 GSSFAAFIDIPSAAVVVGGAIAACFIAFPGAAMLLFPKVLKKVFFPK---QQELAPVITQ 81
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
+ ++ E ++ + I + + V
Sbjct: 82 IVEFAEIARRDGILALEAKTEEIEDPFILLGVQ------------------MAVDGTDVD 123
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
+E ++ E++ + + +G PA G++G ++G+I +GN+ P+ +G
Sbjct: 124 LMEQILRTEMEAVAGRHKNGKSLMDTVGRYAPAFGMIGTLMGLIIMLGNMDD-PEAIGPG 182
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+ V+L TL G ++S P ++ ++ ++ ++ K LIA G P+V +
Sbjct: 183 MAVALITTLYGALVSNLFFLPFADKLAFYSKQEFQVREVIIKGLIAIQEGDNPRVIEQKL 242
Query: 262 RKVLPLSER 270
LP +R
Sbjct: 243 NTFLPQDQR 251
>gi|187919310|ref|YP_001888341.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187717748|gb|ACD18971.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 254
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 94/258 (36%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G + I+ GF GG+ L Q VIV G G ++ N D
Sbjct: 3 LLTLFGAVFGVTAIVAGFSLEGGHFTSLFQLEAFVIVLGGTFGAVMIQNTWARFFDGIKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + L +L K E+ +E
Sbjct: 63 LRLAF---VKARQVDRESLSVLLEWGDQAKLNGMLVFES-----------------IEAG 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + +E+ + E+D + G P GI+GA
Sbjct: 103 GINPFAKRGLELLANGVSTA-VLEDALQRELDAYERNHMLAARIWQQAGGYAPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ G++ + P LG I V+ TL G+ L+ + PL +I++ + R +
Sbjct: 162 VLGLIQVTGHMLE-PAQLGQGIAVAFVATLYGLALANLVFLPLYGKIRAQVDSELRFRRL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|115360212|ref|YP_777350.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|115285500|gb|ABI91016.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
Length = 254
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+
Sbjct: 3 LLTLAGVILGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F Q+ L L K E+ ++ +
Sbjct: 63 LRLAF---VRAQEVDRKHLTDLLEWGDRAKLDGLLAFES-----------------MDVS 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + +E+ + E+D +L G P GI+G+
Sbjct: 103 GIHPFARRGLELLANGVSTA-VLEDALHRELDAYERSRLAAARVWHQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + R +
Sbjct: 162 VLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFRKL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|15611818|ref|NP_223469.1| flagellar motor protein MotA [Helicobacter pylori J99]
gi|15645434|ref|NP_207608.1| flagellar motor protein MotA [Helicobacter pylori 26695]
gi|108563225|ref|YP_627541.1| flagellar motor protein MotA [Helicobacter pylori HPAG1]
gi|188527340|ref|YP_001910027.1| flagellar motor protein MotA [Helicobacter pylori Shi470]
gi|208434726|ref|YP_002266392.1| flagellar motor rotation protein [Helicobacter pylori G27]
gi|210135014|ref|YP_002301453.1| flagellar motor protein MotA [Helicobacter pylori P12]
gi|217032505|ref|ZP_03437996.1| hypothetical protein HPB128_180g4 [Helicobacter pylori B128]
gi|217034138|ref|ZP_03439558.1| hypothetical protein HP9810_868g31 [Helicobacter pylori 98-10]
gi|298736518|ref|YP_003729044.1| chemotaxis protein MotA [Helicobacter pylori B8]
gi|308182971|ref|YP_003927098.1| flagellar motor protein MotA [Helicobacter pylori PeCan4]
gi|54037819|sp|P65411|MOTA_HELPJ RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|54041481|sp|P65410|MOTA_HELPY RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|2313947|gb|AAD07864.1| flagellar motor rotation protein (motA) [Helicobacter pylori 26695]
gi|4155315|gb|AAD06330.1| putative CHEMOTAXIS PROTEIN (MOTILITY PROTEIN A) [Helicobacter
pylori J99]
gi|107836998|gb|ABF84867.1| flagellar motor rotation protein [Helicobacter pylori HPAG1]
gi|188143580|gb|ACD47997.1| flagellar motor protein MotA [Helicobacter pylori Shi470]
gi|208432655|gb|ACI27526.1| flagellar motor rotation protein [Helicobacter pylori G27]
gi|210132982|gb|ACJ07973.1| flagellar motor rotation protein MotA [Helicobacter pylori P12]
gi|216943422|gb|EEC22878.1| hypothetical protein HP9810_868g31 [Helicobacter pylori 98-10]
gi|216945783|gb|EEC24406.1| hypothetical protein HPB128_180g4 [Helicobacter pylori B128]
gi|261837955|gb|ACX97721.1| flagellar motor rotation protein [Helicobacter pylori 51]
gi|298355708|emb|CBI66580.1| chemotaxis protein MotA [Helicobacter pylori B8]
gi|308062135|gb|ADO04023.1| flagellar motor protein MotA [Helicobacter pylori Cuz20]
gi|308063397|gb|ADO05284.1| flagellar motor protein MotA [Helicobacter pylori Sat464]
gi|308065156|gb|ADO07048.1| flagellar motor protein MotA [Helicobacter pylori PeCan4]
gi|317009175|gb|ADU79755.1| flagellar motor protein MotA [Helicobacter pylori India7]
gi|317012626|gb|ADU83234.1| flagellar motor protein MotA [Helicobacter pylori Lithuania75]
gi|317014224|gb|ADU81660.1| flagellar motor protein MotA [Helicobacter pylori Gambia94/24]
gi|317180578|dbj|BAJ58364.1| flagellar motor protein MotA [Helicobacter pylori F32]
gi|332673380|gb|AEE70197.1| flagellar motor protein MotA [Helicobacter pylori 83]
Length = 257
Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+GL + + I G GNP +I ++I+ L + + +K +
Sbjct: 3 LSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + + +K L L +K E + +
Sbjct: 63 IKIVFLNPKINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + + MII G ++ ++ I+ + H GE+ P +G+VGA
Sbjct: 106 ---DFTRNGLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L +P + I + T T+ GI+ SY++ P ++K+ + +
Sbjct: 162 VMGLMLALQKL-DNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++ NG P+ + E
Sbjct: 221 LLEGILGIANGENPRDLENKLLNYIAPGE 249
>gi|329298549|ref|ZP_08255885.1| flagellar motor protein MotA [Plautia stali symbiont]
Length = 159
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 78/137 (56%)
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGI 213
+E P +++ +G+ LPA GIV A++G++ A+ + + LG I ++ GT LGI
Sbjct: 18 YEHECEVPAQSLAAVGDGLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGI 77
Query: 214 ILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+L+Y +PL S ++ + ++ VK L++ +NG PQ+A+E+GRK L +ERPS
Sbjct: 78 LLAYGFISPLASVLRQKCAETTKMMQCVKVTLLSSLNGYAPQIAVEFGRKTLYSTERPSF 137
Query: 274 EIVAQEVLQYNHNKKAS 290
+ + V + K +
Sbjct: 138 TELEEHVRNAKNPAKQT 154
>gi|91225059|ref|ZP_01260281.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|254228603|ref|ZP_04922027.1| chemotaxis protein PomA [Vibrio sp. Ex25]
gi|262395024|ref|YP_003286878.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
gi|269965068|ref|ZP_06179233.1| flagellar motor protein [Vibrio alginolyticus 40B]
gi|3024412|sp|O06873|POMA_VIBAL RecName: Full=Chemotaxis protein PomA
gi|2130948|dbj|BAA20284.1| PomA [Vibrio alginolyticus]
gi|91190002|gb|EAS76273.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|151938782|gb|EDN57616.1| chemotaxis protein PomA [Vibrio sp. Ex25]
gi|262338618|gb|ACY52413.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
gi|269830371|gb|EEZ84596.1| flagellar motor protein [Vibrio alginolyticus 40B]
Length = 253
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL +I GG+ + + I+IV G + +M + +
Sbjct: 3 LATLLGLIGGFAFVIMAMVL-GGSIGMFVDVTSILIVVGGSIFVVLMKFTMGQFFGATKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF+ + +++ G+ + + + ++I + + G+ PA+G++G
Sbjct: 100 INNTFMQKGIDLLVDGH-DADVVRAALKKDIALTDERHTQGTGVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAILSNMVFFPIADKLSLRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|203284202|ref|YP_002221942.1| flagellar motor rotation protein A [Borrelia duttonii Ly]
gi|203287741|ref|YP_002222756.1| flagellar motor rotation protein A [Borrelia recurrentis A1]
gi|201083645|gb|ACH93236.1| flagellar motor rotation protein A [Borrelia duttonii Ly]
gi|201084961|gb|ACH94535.1| flagellar motor rotation protein A [Borrelia recurrentis A1]
Length = 261
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I V ++ + ++K
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITIVGSFSALVASSEITIVKRIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + ++K L L +K ++ +D +
Sbjct: 63 LGFFFKRSSFSK---IPIIKTLVELSEKARKEGLLSLDDELDQIDD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G I ++ E++ + + PA G++G
Sbjct: 106 ---IFFKSGMRLVVDGT-DPEIIRTMLFLELEQMQERHKVGADLFGTWAKLAPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +GNL LG+++ V+L TL G I+S + P+ +++S L++ + +
Sbjct: 162 LIGLIALLGNLEDR-SALGSSMAVALVTTLYGTIMSNLMLTPIQLKLESIDLEEASVRAM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ G P++ + L +R
Sbjct: 221 IVEGILSIQAGDNPRILEQKLVTFLTPKDR 250
>gi|269962341|ref|ZP_06176691.1| flagellar motor protein [Vibrio harveyi 1DA3]
gi|269832837|gb|EEZ86946.1| flagellar motor protein [Vibrio harveyi 1DA3]
Length = 253
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG+ + I I+IV G +M + +
Sbjct: 3 LATLIGLIGGFAFVIMAMVL-GGSISMFIDVTSILIVVGGSTFVVLMKFTIGQFFGATKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + + G+ PA+G++G
Sbjct: 100 INNSFMQKGIDLLVDGH-DADVVRAALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +LS L P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAVLSNMLFFPIADKLSLRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|332992376|gb|AEF02431.1| flagellar motor protein PomA [Alteromonas sp. SN2]
Length = 254
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 116/278 (41%), Gaps = 27/278 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I ++ GG+ + I I+IV G L + L +G
Sbjct: 3 LATVIGMLGAIGFVVMAMVM-GGSIAMFINVPSILIVFGGTLFVILSQYTLGQFFGAGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
+ F +K DT D+++ + + +KG E ID+P
Sbjct: 62 AGKAFMFKI---DTPEDLIEKIVEMADAARKGGFLALEEAEIDNP--------------- 103
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + M++ G+ + + ++I + MG+ PA+G++G
Sbjct: 104 -----FMQKGVDMLVDGHDIE-VVRETLAKDISMTTERHEFGATIFKGMGDIAPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + N+ PK +G A+ V+L TL G L+ +C P+ ++ + ++ +
Sbjct: 158 TLIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAFLANIICLPMAVKLGNRAQEEKLNQM 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+V ++ +G P+V + L S+R +
Sbjct: 217 LVLDGIVGIADGQNPRVIEGILKNYLAASKRGTGAEDE 254
>gi|187918155|ref|YP_001883718.1| chemotaxis MotA protein [Borrelia hermsii DAH]
gi|119861003|gb|AAX16798.1| chemotaxis MotA protein [Borrelia hermsii DAH]
Length = 261
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++IIG + I+ + + I V ++ + +K +
Sbjct: 3 LASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSFSALVASSEIPTVKKIPIY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + G+ ++K L L +K ++ ++ +
Sbjct: 63 LGFFFKKSSFGR---VPIIKTLVELSEKARKEGLLSLDDELEQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G I ++ E+D + + PA G+ G
Sbjct: 106 ---PFFKSGMRLVVDGT-DPEIIRTMLYLELDQMQERHKIGADLFGTWAKLAPAFGMTGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +GNL LG+++ V+L TL G I++ + P+ +++S L++ + +
Sbjct: 162 LIGLIALLGNLEDR-SALGSSMAVALITTLYGTIMANLMLFPIQIKLESIDLEEASVRTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ G P++ + L +R
Sbjct: 221 IVEGILSIQAGDNPRILEQKLVTFLTPKDR 250
>gi|323495110|ref|ZP_08100197.1| flagellar motor protein PomA [Vibrio brasiliensis LMG 20546]
gi|323310661|gb|EGA63838.1| flagellar motor protein PomA [Vibrio brasiliensis LMG 20546]
Length = 254
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG+ + I I+IV G +M + +
Sbjct: 3 LATLIGLIGGFAFVIMAMIL-GGSIMMFIDVTSILIVVGGSTFVVLMKFTMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKVVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + G+ PA+G++G
Sbjct: 100 ITNSFMQKGIDLLVDGH-DADVVRAALQKDIALTDERHDFGSSVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAILSNMVFFPIADKLSLRREQEKLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|28897463|ref|NP_797068.1| flagellar motor protein PomA [Vibrio parahaemolyticus RIMD 2210633]
gi|260364263|ref|ZP_05776962.1| chemotaxis protein PomA [Vibrio parahaemolyticus K5030]
gi|260876423|ref|ZP_05888778.1| chemotaxis protein PomA [Vibrio parahaemolyticus AN-5034]
gi|260898694|ref|ZP_05907190.1| chemotaxis protein PomA [Vibrio parahaemolyticus Peru-466]
gi|260902771|ref|ZP_05911166.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ4037]
gi|4322000|gb|AAD15904.1| sodium-driven polar flagellar protein [Vibrio parahaemolyticus]
gi|28805675|dbj|BAC58952.1| sodium-driven polar flagellar protein MotA [Vibrio parahaemolyticus
RIMD 2210633]
gi|308086852|gb|EFO36547.1| chemotaxis protein PomA [Vibrio parahaemolyticus Peru-466]
gi|308092978|gb|EFO42673.1| chemotaxis protein PomA [Vibrio parahaemolyticus AN-5034]
gi|308106856|gb|EFO44396.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ4037]
gi|308113752|gb|EFO51292.1| chemotaxis protein PomA [Vibrio parahaemolyticus K5030]
gi|328472527|gb|EGF43390.1| flagellar motor protein PomA [Vibrio parahaemolyticus 10329]
Length = 253
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG+ + + I+IV G +M L +
Sbjct: 3 LATLIGLIGGFAFVIMAMVL-GGSIGMFVDVTSILIVVGGSAFVVLMKFTLGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + + G+ PA+G++G
Sbjct: 100 INNSFMQKGIDLLVDGH-DADVVRAALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +LS L P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAVLSNMLFFPIADKLSLRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|322379331|ref|ZP_08053707.1| flagellar motor protein MotA [Helicobacter suis HS1]
gi|322380702|ref|ZP_08054841.1| flagellar motor protein MotA [Helicobacter suis HS5]
gi|321146870|gb|EFX41631.1| flagellar motor protein MotA [Helicobacter suis HS5]
gi|321148244|gb|EFX42768.1| flagellar motor protein MotA [Helicobacter suis HS1]
Length = 256
Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 108/269 (40%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S+++G+ + I I G GGNP ++ I+I+ L +++ + +K +
Sbjct: 3 LSSLLGVILAITAISVGDLLEGGNPIHVVHLSSIIIIVPTTLCAAMVSTHARYVKAAFKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + ++ + +K E+ + +
Sbjct: 63 IKIVFLNPKV---DLQETIRNIVEFSTMARKDGVLSLESKVSQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + MI+ G ++ +D I+ + H GES P G+VGA
Sbjct: 106 ---DFTRNGFSMIVDGKDI-KSVQESLDVAIEELEEYYHGAAHYWITAGESAPTFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG++ A+ L +P+ + I + T T+ GI SY+L P +++KS + ++
Sbjct: 162 VLGLMLALQKL-DNPQAMALGIAGAFTATVTGITCSYALFGPFGNKLKSKAKDILKEKVV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++ NG P+ + E
Sbjct: 221 ILEGIVGIANGDNPRDLEMKLLNYIAPGE 249
>gi|109947290|ref|YP_664518.1| flagellar motor protein MotA [Helicobacter acinonychis str. Sheeba]
gi|109714511|emb|CAJ99519.1| flagellar motor rotation protein MotA [Helicobacter acinonychis
str. Sheeba]
Length = 257
Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+GL + I I G GNP +I ++I+ L + + +K +
Sbjct: 3 LSTILGLVLAIASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF + + + +K L L +K E + +
Sbjct: 63 IKIIFLNPKINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + + MII G ++ ++ I+ + H GE+ P +G+VGA
Sbjct: 106 ---DFTRNGLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L +P + I + T T+ GI+ SY++ P ++K+ + +
Sbjct: 162 VMGLMLALQKL-DNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++ NG P+ + E
Sbjct: 221 LLEGILGIANGENPRDLENKLLNYIAPGE 249
>gi|323528402|ref|YP_004230554.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323385404|gb|ADX57494.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 254
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 98/258 (37%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GGN L Q VIV G LG ++ N D
Sbjct: 3 LLTVFGVVFGVAAIVAGFSLEGGNFTSLFQLEAFVIVLGGTLGAVMIQNTWARFFDGVKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + L +L K E+ +E N
Sbjct: 63 LRFAF---VKARQVDRESLSVLLEWGDQAKLNGLLVFES-----------------IEAN 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ F + ++ G + + +E+ + E+D L G P GI+GA
Sbjct: 103 GISPFAKRGLELLANGVSTA-VLEDALQREVDAYERNYLAAARIWQQAGGYAPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ G++ + P LG I V+ TL G+ L+ + PL +I++ + R +
Sbjct: 162 VLGLIQVTGHMLE-PSQLGQGIAVAFVATLYGLALANLVFLPLFGKIRAQVDSELRFRRL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|325109022|ref|YP_004270090.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324969290|gb|ADY60068.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 258
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 96/249 (38%), Gaps = 22/249 (8%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ ++V G + +A P+ + + ++ V+K
Sbjct: 25 GGSLMAFWDTASAMVVIGGAIAATCIAFPMGALFLVPGVMKKVISPNVPELRP---VIKQ 81
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
L ++ E+ ++ + I I + V +
Sbjct: 82 LVEFAEIARRDGILALESKTEEITDPFILLGIQ------------------MAVDGTDAE 123
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
+E ++ E++ + + +G PA G++G ++G+I +GN+ P +G
Sbjct: 124 LMEAVLRSEMEAVSSRHKTGKSLMETVGRYAPAFGMIGTLMGLIIMLGNMDD-PAAIGPG 182
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+ V+L TL G ++S + P ++ ++ + ++ + +++ +G P+V +
Sbjct: 183 MAVALITTLYGAMVSNIVFLPFADKLGFYSKRELEVREVIVRGILSIQDGDNPRVLEQKL 242
Query: 262 RKVLPLSER 270
LP+++R
Sbjct: 243 NTFLPVAQR 251
>gi|317178825|dbj|BAJ56613.1| flagellar motor protein MotA [Helicobacter pylori F30]
Length = 257
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+GL + + I G GNP +I ++I+ L + + +K +
Sbjct: 3 LSTILGLVLAVTSISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + + + +K L L +K E + +
Sbjct: 63 IKIVFLNPKINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + + MII G ++ ++ I+ + H GE+ P +G+VGA
Sbjct: 106 ---DFTRNGLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L +P + I + T T+ GI+ SY++ P ++K+ + +
Sbjct: 162 VMGLMLALQKL-DNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + ++ NG P+ + E
Sbjct: 221 LLEGILGIANGENPRDLENKLLNYIAPGE 249
>gi|297544066|ref|YP_003676368.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841841|gb|ADH60357.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 274
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 101/253 (39%), Gaps = 18/253 (7%)
Query: 17 GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC 76
G+ GG LI ++V G +G +++ + IK L++ F ++ + Y
Sbjct: 21 GYTLGGGTLDSLIDVGSAILVIGGTIGATIVSYSMDDIKKVPRLLVKAFKNQS---NNYL 77
Query: 77 DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG 136
+++K L + E+ ++ S + +L+ ++V
Sbjct: 78 EIIKYFAYLAQKARSEGLLSLESEME----SEKIKNFDPILKE----------CLELVVD 123
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
+ I+ M+ +I I E K G P +G++G ++G+IK + L P
Sbjct: 124 GSDMELIKTTMENKIYIEDMEAKKEAGIFEAAGGYAPTMGLIGTVVGLIKVLLELDD-PS 182
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+G ++ ++ TL G +L+ P+ ++++ + ++ + ++ G P++
Sbjct: 183 QIGPSVSLAFITTLYGALLANLFFLPIAQKLRNKASIKRIEKELILEGSLSLQAGENPRI 242
Query: 257 AIEYGRKVLPLSE 269
+ ++
Sbjct: 243 LERKLMTFITQAQ 255
>gi|157164025|ref|YP_001466587.1| permease [Campylobacter concisus 13826]
gi|112800734|gb|EAT98078.1| chemotaxis protein PomA [Campylobacter concisus 13826]
Length = 255
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 105/272 (38%), Gaps = 22/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G +T++ + G G I ++IV G +G ++ ++ +K G
Sbjct: 3 LGTVVGWVLTLVLLFGSMAI-GVGIGPYIDIPSVMIVFGGTIGVMMVGFKMETLKGVGKF 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + +K + ++ E+ +++ N
Sbjct: 62 YGVAVKPSVVV--NLPETIKKVVDYSTKARRDGILALESEVNNESN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M + GN I L++ +ID +G A+G++G
Sbjct: 106 ---QFLKKGLSMAVDGN-EPDAIRALLEIDIDQTSTRHANNIKIFEQVGGFAGAMGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S P +G ++ V+L TL G ++ + +P+ + + + +
Sbjct: 162 LIGLVAMLLNMSD-PSAIGPSMAVALLTTLYGAMIGNIIGSPVANILSIRDADEALEKQV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + ++A G P+ LP +R S
Sbjct: 221 ILEGIMAIQAGDNPRTLEAKLLAFLPPKDRKS 252
>gi|134292849|ref|YP_001116585.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134136006|gb|ABO57120.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
Length = 254
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 97/258 (37%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GG+ +L Q +VIV G LG ++ N D+
Sbjct: 3 LLTLAGVLLGGAAIVFGFALEGGHFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F Q+ L L K E+ ++
Sbjct: 63 LRLAF---VRAQEVDRKHLSDLLEWGDRAKLNGLLAFES-----------------MDVT 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + +E+ + E+D +L G P GI+G+
Sbjct: 103 GIHPFARRGLELLANGVSSA-VLEDALQRELDAYERSRLAAARVWHQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + R +
Sbjct: 162 VLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFRKL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|119953080|ref|YP_945289.1| chemotaxis MotA protein [Borrelia turicatae 91E135]
gi|119861851|gb|AAX17619.1| chemotaxis MotA protein [Borrelia turicatae 91E135]
Length = 261
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++I+G + I+ + + I V ++ + +K
Sbjct: 3 LASIVGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSFSALVASSEIPTVKRIPTY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + G+ ++K L L +K ++ +D +
Sbjct: 63 LGLFFKKSSFGKVF---IIKTLVELSEKARKEGLLSLDDELDQIND-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F MR+++ G A I ++ E+D + + PA G+ G
Sbjct: 106 ---PFFKSGMRLVVDG-ADPEIIRTMLYLELDQMQERHKIGADLFGTWAKLAPAFGMTGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +GNL LG+++ V+L TL G I++ + P+ +++S +++ + +
Sbjct: 162 LIGLIALLGNLEDR-SALGSSMAVALITTLYGTIMANLMLLPIQIKLESIDIEEASVKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +++ G P++ + L +R
Sbjct: 221 IVEGILSIQAGDNPRILEQKLVTFLTPKDR 250
>gi|27363787|ref|NP_759315.1| flagellar motor protein PomA [Vibrio vulnificus CMCP6]
gi|37679055|ref|NP_933664.1| flagellar motor protein PomA [Vibrio vulnificus YJ016]
gi|320157196|ref|YP_004189575.1| flagellar motor rotation protein MotA [Vibrio vulnificus MO6-24/O]
gi|27359904|gb|AAO08842.1| Flagellar motor rotation protein motA [Vibrio vulnificus CMCP6]
gi|37197797|dbj|BAC93635.1| flagellar motor component [Vibrio vulnificus YJ016]
gi|319932508|gb|ADV87372.1| flagellar motor rotation protein MotA [Vibrio vulnificus MO6-24/O]
Length = 253
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 114/270 (42%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + ++ GG+ + + I+IV G + +M + +
Sbjct: 3 LATLLGLIGGLAFVVMAMIL-GGSIMMFVDVTSILIVVGGSIFVVLMKFTMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + + G+ PA+G++G
Sbjct: 100 ISNSFMQKGIDLLVDGH-DADVVRAALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAILSNMVFFPIADKLALRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L S+R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNESKR 247
>gi|152995177|ref|YP_001340012.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150836101|gb|ABR70077.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 251
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 118/270 (43%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + + II +GG+ + I +IV +M PL +G
Sbjct: 3 IATLIGLVGSFIVIIAA-IFVGGSAGMFIDTASTLIVLVGSTFVVLMQYPLSQFLSAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K++ DT D + Y L +KG E
Sbjct: 62 AAKAFMFKSVPLDTLIDEI---YGLADEARKGGLLSLEG-------------------KE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G+ ++N + ++++ Y G+ PA+G++G
Sbjct: 100 VSHPFLSKGIQMLVDGH-DGNVVKNQLSKDMNQSYYRHSAGAKVFKAFGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+S PK +G A+ V+L TL G +L+ +C P+ +++ ++ +
Sbjct: 159 LVGLVQMLANMSD-PKAIGPAMAVALLTTLYGAMLANMVCLPIQAKLNIRADEELTCQKL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ AL+A +G P++ + + +R
Sbjct: 218 ILDALLAIQSGQNPRILDGALKTYIAEGKR 247
>gi|209516112|ref|ZP_03264971.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209503396|gb|EEA03393.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 254
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 51/259 (19%), Positives = 97/259 (37%), Gaps = 24/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ I+ GF GG+ L Q VIV G LG ++ N D+
Sbjct: 3 LLTLFGVLFGGAAIVFGFALEGGHFLTLFQYEAFVIVLGGTLGAVMIQNTWARFFDALKL 62
Query: 61 LLEIF-GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
L F + + Q + D+L K E+ ++
Sbjct: 63 LGLAFTRARQVDQKSLADLL----EWGDQAKLNGLLAFES-----------------MDA 101
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ + F + ++ G + + +E+ + E+D + G P GI+G
Sbjct: 102 SGIHPFAKRGLELLANGLSTA-VLEDALQRELDAYARNHMAAARVWQQAGGYAPTFGILG 160
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++LG+I+ ++ P LG+ I + TL G+ L+ + PL ++++ + R
Sbjct: 161 SVLGLIQVTNHILD-PAQLGSGIATAFVATLYGLALANLVFLPLYGKLQAQVDSEVRFRR 219
Query: 240 IVKKALIAYMNGAIPQVAI 258
+ L+A P
Sbjct: 220 LYLDGLLAISRKESPHTIE 238
>gi|256376463|ref|YP_003100123.1| MotA/TolQ/ExbB proton channel [Actinosynnema mirum DSM 43827]
gi|255920766|gb|ACU36277.1| MotA/TolQ/ExbB proton channel [Actinosynnema mirum DSM 43827]
Length = 257
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 101/264 (38%), Gaps = 22/264 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++I G + + I + GGNP + I++V +G + + ++ +
Sbjct: 4 ASIAGTVLVFVAIFVSTFLEGGNPLSMFLLPPILLVVFGTIGAVMASGVMRDSMSLPALI 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F + + + L ++ E +
Sbjct: 64 KRAFLAPKMDGSVVVESI---VSLADRARREGLLALEEEAKKVED--------------- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + I G S EI +++ EI+ + MG P IGI+G +
Sbjct: 106 --PFLRRGLVLAIDG-MDSKEIREILEGEIETKQRYDKVGVKMFTDMGALAPTIGIIGTV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I + NLS P LG I + TL G++ + ++ P+ +++K + +V
Sbjct: 163 LGLIHVLENLSD-PAKLGHLIAGAFVATLWGVMTANAIWLPIGNRLKRISDLECEQMEVV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVL 265
+ ++A G+ P++ + R ++
Sbjct: 222 VEGVLAIQAGSNPRLVGQKLRAMV 245
>gi|289577779|ref|YP_003476406.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter italicus Ab9]
gi|289527492|gb|ADD01844.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter italicus Ab9]
Length = 274
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 101/253 (39%), Gaps = 18/253 (7%)
Query: 17 GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC 76
G+ GG LI ++V G +G +++ + IK L++ F ++ + Y
Sbjct: 21 GYTLGGGTLDSLIDVGSAILVIGGTIGATIVSYSMDDIKKVPRLLVKAFKDQS---NNYL 77
Query: 77 DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG 136
+++K L + E+ ++ S + +L+ ++V
Sbjct: 78 EIIKYFAYLAQKARSEGLLSLESEME----SEKIKNFDPILKE----------CLELVVD 123
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
+ I+ M+ +I I E K G P +G++G ++G+IK + L P
Sbjct: 124 GSDMELIKTTMENKIYIEDMEAKKEAGIFEAAGGYAPTMGLIGTVVGLIKVLLELDD-PS 182
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+G ++ ++ TL G +L+ P+ ++++ + ++ + ++ G P++
Sbjct: 183 QIGPSVSLAFITTLYGALLANLFFLPIAQKLRNKASIKRIEKELILEGSLSLQAGENPRI 242
Query: 257 AIEYGRKVLPLSE 269
+ ++
Sbjct: 243 LERKLMTFITQAQ 255
>gi|239996640|ref|ZP_04717164.1| flagellar motor protein PomA [Alteromonas macleodii ATCC 27126]
Length = 253
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 109/275 (39%), Gaps = 25/275 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I I+ GG+ + I I+IV G L + L +G
Sbjct: 3 LATVIGMLGAIGFIVMAMIL-GGSLGMFIDVQSILIVFGGTLFVVLSQFTLGQFFSAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + ++++ + + +KG E
Sbjct: 62 AGKAFMFKIETPE---ELIEKIVEMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G+ + + ++I + MG+ PA+G++G
Sbjct: 100 ISNEFMQKGVDMLVDGHDIE-VVRETLAKDISMTTERHEFGASIFKGMGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G + +C P+ ++ ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAFFANVVCLPIAFKLAVRAGEEKLNQSL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
V ++ +G P+V + L S+R S E
Sbjct: 218 VLDGIVGIADGQNPRVIEGVLKNYLAASKRGSAEE 252
>gi|152980181|ref|YP_001353772.1| MotA chemotaxis protein [Janthinobacterium sp. Marseille]
gi|151280258|gb|ABR88668.1| MotA chemotaxis protein [Janthinobacterium sp. Marseille]
Length = 246
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 22/239 (9%)
Query: 27 ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILM 86
L+QP +IV +G ++ + + ++F K D Y ++K +
Sbjct: 29 SLVQPAAFIIVVVGTIGAVLLQSGWRNFVQGLKMSGQVFMPKE---DDYPALIKDITAWS 85
Query: 87 YNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENL 146
++ E I D + FI +R+I+ G ++ ++
Sbjct: 86 VIARREGLLSLERVIKDIQD-----------------PFIAHGLRLIVDG-VDPTKLRDV 127
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
+D EI + G P IGI+GA+LG+I M NLS P LG+ I V+
Sbjct: 128 LDLEIGAYETRQRLSIKIWEAAGGYAPTIGILGAVLGLIHVMENLSD-PSRLGSGIAVAF 186
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVL 265
T+ G+ + + P++S++K+ + + ++ A G P++ E L
Sbjct: 187 VATIYGVGFANLIFLPISSKLKALVNRDIFKHEMLADAFAGIAAGDNPRLIEERMNVYL 245
>gi|254509022|ref|ZP_05121127.1| flagellar motor protein [Vibrio parahaemolyticus 16]
gi|323498630|ref|ZP_08103622.1| flagellar motor protein PomA [Vibrio sinaloensis DSM 21326]
gi|219548057|gb|EED25077.1| flagellar motor protein [Vibrio parahaemolyticus 16]
gi|323316328|gb|EGA69347.1| flagellar motor protein PomA [Vibrio sinaloensis DSM 21326]
Length = 254
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL +I GG+ + + I+IV G +M + +
Sbjct: 3 LATLVGLIGGFAFVIMAMIL-GGSIMMFVDVTSILIVVGGSTFVVLMKFTMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKVVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + G+ PA+G++G
Sbjct: 100 ITNSFMQKGIDLLVDGH-DADVVRAALQKDIALTDERHDFGSSVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAILSNMVFFPIADKLSLRREQEKLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|56461235|ref|YP_156516.1| flagellar motor protein PomA [Idiomarina loihiensis L2TR]
gi|56180245|gb|AAV82967.1| Flagellar motor component [Idiomarina loihiensis L2TR]
Length = 255
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 105/270 (38%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ I ++ GG+ + + IV G L + L +G
Sbjct: 3 IATLLGIIGAIGFVVVAMVL-GGDITLFLDTQSFFIVFGGSLFITLANFSLGQFLGTGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++ F +K D + + +KG E
Sbjct: 62 VVKAFFFKIEHPQELIDTA---VEMADSARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + M++ G+ + + + ++I + + + + PA+G++G
Sbjct: 100 IPNKFFRKGVDMLVDGH-DAEVVRQTLSKDIKMSFARHEEGARVFKILSDVSPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G L+ + P+ +++ ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAFLANVIAIPIANKLLLRAEQEKLNRQL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++ +G P+V R L S+R
Sbjct: 218 ILDAILGIQDGQNPRVIEGILRNYLAESKR 247
>gi|297181725|gb|ADI17906.1| flagellar motor component [uncultured Desulfobacterales bacterium
HF0200_07G10]
Length = 257
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 104/273 (38%), Gaps = 25/273 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++ G+ + I+ GG+ + ++IV G L ++ +K + +
Sbjct: 4 ASLAGIVAGLSLIVVSILL-GGDLGSFVNLPGLMIVIGGTLAAILITFQFDDVKAAFKAA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ +F + + +++ + L +K +
Sbjct: 63 IFVFTSR---KTDSNEMVSTMVELATVSRKQGLVGLSK--------------------VK 99
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ M+I A+ I + ++ EID + M PA G++G +
Sbjct: 100 CESAFLKKACMLIADGAKEDLIRSTLNIEIDSMKQRHAIQQDVFVKMAAFAPAFGMLGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ + NLS P +G ++ V+L T G ++ +C P+ ++K+ ++ I+
Sbjct: 160 IGLVQMLQNLSD-PDSVGPSMAVALLTTFYGSFFAFMICGPIAGKLKARTTREVMNLEIM 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + + P + E +P R ++E
Sbjct: 219 FEGAASIVQENNPMMVYEKLSSYIPTKLRRAME 251
>gi|322432962|ref|YP_004210211.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321165189|gb|ADW70893.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 267
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 106/266 (39%), Gaps = 22/266 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST++G+ + ++ G GG ++QP +IV G LG ++ P++ I+ + L
Sbjct: 9 STVVGVMLAGAGVVAGLLLDGGTVRQILQPTAALIVVGGTLGAVMIQFPMQTIRSTIKEL 68
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++++ L ++ + ++ +
Sbjct: 69 RHALLDAKP---LNRELVEELVSWCLQARRMGMLALDAYLPQIAD--------------- 110
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F M M+ V E+ + ++ ++D+ + + G P +GI+GA+
Sbjct: 111 --PFFRKGM-MLAVDGVGVRELRDTLEVDLDVWHEREAGVAKVLEAAGGFAPTLGIIGAV 167
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+ M + + +G I V+ TL GI L+ + PL ++K ++ + +
Sbjct: 168 LGLIQVMQRM-DNVGEIGKGIAVAFVSTLYGIGLANLVFLPLAGKLKIRMRERQLVREMT 226
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPL 267
+A+++ M G + + L
Sbjct: 227 LEAVVSIMEGVSARALRQRLEAYLTE 252
>gi|323341392|ref|ZP_08081636.1| flagellar motor protein A [Lactobacillus ruminis ATCC 25644]
gi|323091269|gb|EFZ33897.1| flagellar motor protein A [Lactobacillus ruminis ATCC 25644]
Length = 268
Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 110/275 (40%), Gaps = 22/275 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ IIGL + +CI+ G + +L+ VI+ G + + + + IK
Sbjct: 16 IFLIIGLVLGAICIMMALILKGASVAMLLNGEVAVIIFGGMIAAVLSSYTMADIKRLPKV 75
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + + + + L ++ E + N
Sbjct: 76 MKVLMSNEEPDLNGTIEK---MVELSNIARREGLLALEAPV-----------------NE 115
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G A + +I +LM+ E+D + + G + P +G++GA
Sbjct: 116 LDDPFMKQGLELVVDG-AEAEQIRDLMESEVDAMETRHHRMSGLFKTAGATSPTLGVMGA 174
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I A+GNLS LG I + T+ GI + Y + P +++++ ++ L +
Sbjct: 175 AIGLIGALGNLSD-INKLGPMIASAFVATIFGIFMGYLVMMPFATRLEAKNEEEVLLKTL 233
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++ G +V + +P +R E
Sbjct: 234 IIEGVMDIQAGHSAKVIEQKLYAQIPPEKRKVSEE 268
>gi|311069472|ref|YP_003974395.1| flagellar motor protein MotP [Bacillus atrophaeus 1942]
gi|310869989|gb|ADP33464.1| flagellar motor protein MotP [Bacillus atrophaeus 1942]
Length = 273
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 92/229 (40%), Gaps = 22/229 (9%)
Query: 27 ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILM 86
+ IV G ++ P K +K + L + F K D D++K L
Sbjct: 34 SFLDLTSFFIVTGGLCAAIFVSFPPKDLKKTPSVLKQAFIRKE---DNVKDLVKTFVSLS 90
Query: 87 YNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENL 146
+K + V+++ F+ + + I G I +
Sbjct: 91 DQARKQGLLSLDEQA-------------RVIKDP----FLKKGLLLTIDGW-DEETIRLV 132
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
MD EI + K + GE PA G++G ++G++ + NL+ P +LG + V+L
Sbjct: 133 MDSEIAAMEERHRKGRRVLEKAGEFAPAWGMIGTLVGLVLMLKNLND-PGMLGPNMAVAL 191
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
TL G +L+ + NP+ ++++ + ++ + +I +G P+
Sbjct: 192 LTTLYGSLLANMVFNPIAAKLEEKTESEIFTKQLMIEGIIGIQSGKNPR 240
>gi|300114850|ref|YP_003761425.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299540787|gb|ADJ29104.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 256
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + ++GG +G + + P ++IV G +M L S
Sbjct: 3 LATLLGLIGSFG-VVGGAILLGSSVLVFFNPPSLLIVLGGTTAVVLMKFSLSQFLGSFKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F YK + ++K + +K E I
Sbjct: 62 AMKAFMYKTEKPEG---IIKQAVEMAGTARKEGLLALEG-------WEIKN--------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + ++ ++ L +G+ PA+G++G
Sbjct: 103 ---EFMKKGVTLLVDGH-DPEMVRRVLMTDLRQTLSRHELGQKIFKAIGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + ++ PK +G A+ V+L TL G +++ + P ++ ++ I
Sbjct: 159 LIGLVQMLSSMDD-PKKIGPAMAVALLTTLYGAMIANMVALPFADKLALRSNEERLNRSI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +++++ G P+V E +P S R
Sbjct: 218 IIESILSIQQGHNPRVLEELLLTFMPGSRR 247
>gi|257457609|ref|ZP_05622776.1| motility protein A [Treponema vincentii ATCC 35580]
gi|257444995|gb|EEV20071.1| motility protein A [Treponema vincentii ATCC 35580]
Length = 259
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 109/283 (38%), Gaps = 26/283 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++ IG+F I ++ G MG + LI + I G + PL +
Sbjct: 3 IASFIGIFGGIAVVMFG-AFMGSSLGGLIDVPSMFITIGGSYMCLFLTYPLSYVIGIFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + ++++ L L ++ E I D +
Sbjct: 62 MGRVFKVADYKEK---EMVQKLVALSEKSRRTGLLALEEEIQDFED-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +R +I G I M+ E+ + K I+ P G++G
Sbjct: 105 ---DFLRTGLRNVIDG-IDGAAIRVSMENELTQMEERHNKWISLINAWATLAPGFGMLGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + N+ + LG + V+L T G +++ L P+ S++ + R +
Sbjct: 161 VIGLIGMLLNI-EDKSSLGPNMAVALVTTFYGSMMANWLLIPIASKLAYQNNLEVRSKEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQY 283
+ + ++ +G P++ + L +R +++ EV++
Sbjct: 220 IIEGILGIQSGDHPRILAQRLLTYLDPKDR---KVLEAEVMKE 259
>gi|114563952|ref|YP_751466.1| flagellar motor protein PomA [Shewanella frigidimarina NCIMB 400]
gi|114335245|gb|ABI72627.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 255
Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 113/271 (41%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ IIG GG + I I+IV L +M LK +
Sbjct: 3 LATLIGIIGAFAFIIGAMITSGG-IGLFIDVPSILIVVAGSLFVVMMKFNLKQFLGAIKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K + D+++ + +KG E +
Sbjct: 62 GMKAFMFKLDKPE---DLIEQAVTMADAARKGGFLALEEAV------------------- 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF+ + M++ G+ + N ++++I + MG+ PA+G++G
Sbjct: 100 ITNTFMQKAVDMLVDGHDGD-VVRNALEKDIALTEERHKTGVGIFKAMGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G ++ V+L TL G +++ + P+ ++ ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPSMAVALLTTLYGAVIANMIAIPMADKLSLRMNEELLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + L S R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLAESLRK 248
>gi|239628982|ref|ZP_04672013.1| YtxD [Clostridiales bacterium 1_7_47_FAA]
gi|239519128|gb|EEQ58994.1| YtxD [Clostridiales bacterium 1_7_47FAA]
Length = 286
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 103/274 (37%), Gaps = 29/274 (10%)
Query: 2 STIIGLFITILCIIGGFY-------AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVI 54
+I+G + + + G + N + + I G +G +++ P
Sbjct: 4 LSILGFILAVGLVGFGMTFDQEAMKLVFTNIRAFVDVPSMAITIGGTIGVMMISFPAGAF 63
Query: 55 KDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIP 114
K G L I A + + L + E+ +++ + S+
Sbjct: 64 KKIGSHLKIIVRPYAFNP---VQSISQIVSLATEARMKGLLSLEDKLNEIDEPFLHNSL- 119
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
M++V + S ++ M+ E++ + PA
Sbjct: 120 -----------------MLVVDSVDSEKVRKAMETELEQLDERHALDRRFYEKAASYAPA 162
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
G++G ++G+I +GN+S L + V+L TL G +L+ + P+ S++K+ ++
Sbjct: 163 FGMIGTLVGLILMLGNMSDV-DALAKGMAVALITTLYGSLLANIIFLPMASKLKARHEEE 221
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLS 268
+V + ++A G P+ E K+LP S
Sbjct: 222 FLCKQLVMEGVLAIQEGENPKFIEEKLFKLLPAS 255
>gi|78356581|ref|YP_388030.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218986|gb|ABB38335.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 251
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 111/273 (40%), Gaps = 25/273 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ G+ ++G MGGN + ++IV G ++ P + + +
Sbjct: 3 IATLFGIIAGFGLVVGA-IFMGGNFADFVNLPGLMIVFGGTGAAILVTFPFEEVVQAVKG 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++FG + + DV+ + + ++ E HI +++ ++ +N
Sbjct: 62 GLQVFGARNVK---NRDVVNTMVRVAEISRREGLTALE-HIK--TENSLLKKACQLIADN 115
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
I D + + EI + + +G PA G++G
Sbjct: 116 ADHALIRDTVMI-----------------EIATMRRRHNVSIAVFNRLGAFAPAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + L+ P +G A+ V++ T G +++ L P+ ++K+ L++ I
Sbjct: 159 LIGLVQMLTRLND-PAAIGPAMAVAILTTFYGALMANLLFLPIAGKLKARTLQEEVHLFI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ + + + P++ E L ER S+
Sbjct: 218 IFEGAKSILENNNPRLVHEKLSSFLSPQERRSV 250
>gi|117925242|ref|YP_865859.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
gi|117608998|gb|ABK44453.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
Length = 250
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 109/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + I+ GG+ + I ++IV G + + + + + S
Sbjct: 3 LATVIGIVMGFALILMAIML-GGDLGMFINVPSLLIVLGGTVAAMFIKHKMSDVFGSVGV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F K + + L + +K E +
Sbjct: 62 AMKAFLVKPQNPEH---TIGQLIDMANIARKDGILALE-------------------KVK 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + + G A +E+++ ++++ + K +GE+ PA G++G
Sbjct: 100 SEDAFLQGAVNHCVDG-ADPEFLESVLRKDLEYLASRHGKGVAIWEGIGETAPAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + + P +G A+ V+L TL G I + + PL ++ ++ + I
Sbjct: 159 LIGLVQMLATMDD-PSSIGPAMAVALLTTLYGSIFANVIAIPLAVKLTMYSQEEQVVREI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ +I G P++ E + LP S+R
Sbjct: 218 IIDGMIGIQKGVNPRMLQEALKAALPPSQR 247
>gi|253577344|ref|ZP_04854661.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843244|gb|EES71275.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
Length = 267
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 105/260 (40%), Gaps = 24/260 (9%)
Query: 18 FYAMGGNPYILIQ-PFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL-EIFGYKALGQDTY 75
+ G L+Q P VI+ M PL +K + I K + +
Sbjct: 20 MFLKGAPVESLVQNPAAFVIIFVGTAATLFMGFPLSELKKFPTLIKLTIVKPKMISKA-- 77
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
+++ L ++ E +++ + F+ MRMII
Sbjct: 78 -ELITLFTEWATITRREGLLALEAKVEEIND-----------------DFLRGGMRMIID 119
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
GN + + +++++ E+I S G P +G++GA++G+I A+ ++S
Sbjct: 120 GNDQEF-VQDVLTEDIAATEERHKAGALMFSQAGMYAPTLGVLGAVVGLIAALSDMSDM- 177
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+IL AI + T+ GI Y L +P+ +++K K+ + +++ + L++ +G
Sbjct: 178 EILAHAISGAFIATVFGIFTGYVLWHPIANKLKRLSKKEMEIRLMMVEGLLSIQSGVSTI 237
Query: 256 VAIEYGRKVLPLSERPSIEI 275
+ L +ER I
Sbjct: 238 AIQQKLAVFLTPAERAEIFE 257
>gi|332298235|ref|YP_004440157.1| MotA/TolQ/ExbB proton channel [Treponema brennaborense DSM 12168]
gi|332181338|gb|AEE17026.1| MotA/TolQ/ExbB proton channel [Treponema brennaborense DSM 12168]
Length = 260
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 108/274 (39%), Gaps = 22/274 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL CI+ GG +I + + G ++ PLK +
Sbjct: 3 IATIIGLIGGAACIVMSVLTSGGTLMGIIDIPSVFMTIGGSFCALLIVAPLKQVTTMFAI 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F G+ +++ + L ++ E ++D +
Sbjct: 63 IGKTFKIPDFGEKV---LVQNMVALSEKARREGILALEEGLEDLDD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +R+++ G + I +++ E+ + + + ++ P G++G
Sbjct: 106 ---AFMKTGLRLVVDGTDGA-VIRTILESEMSQVEARHMVYINIMNQWAGFAPGFGMMGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I + NL + LG + V+L TL G +++ + P+ ++ + R +
Sbjct: 162 VLGLIGMLNNL-EDKSSLGPNMAVALITTLYGSMMANWILAPMAQKLIGQNNVEMRTKEM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ + +++ G P++ L R +IE
Sbjct: 221 IVEGVLSIQAGDNPRILAMKLLTYLDPKSRKAIE 254
>gi|294139894|ref|YP_003555872.1| chemotaxis pomA protein [Shewanella violacea DSS12]
gi|293326363|dbj|BAJ01094.1| chemotaxis pomA protein [Shewanella violacea DSS12]
Length = 255
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL IIG GG I I ++IV +M LK S
Sbjct: 3 LATLIGLIGAFGFIIGAMATSGG-VGIFIDTASVLIVICGTFFVVMMKYNLKQFLGSVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K D ++++ + +KG E
Sbjct: 62 GVKAFIFKIDKPD---ELIEQSVTMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF+ + M++ G+ + + ++++I + + +G+ PA+G++G
Sbjct: 100 ITNTFMQKAVDMLVDGHDGD-VVRDALEKDIALTEERHKMGISIFTAIGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +++ + P+ ++ ++ +
Sbjct: 159 LVGLVGMLSNMDD-PKSIGPAMAVALLTTLYGAMIANMVAIPIAGKLGLRMAEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++A +G P+V + + L +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLSEKQR 247
>gi|294084382|ref|YP_003551140.1| MotA/TolQ/ExbB proton channel [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663955|gb|ADE39056.1| MotA/TolQ/ExbB proton channel [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 254
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 106/276 (38%), Gaps = 25/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++IG+ I I+ GG I ++IV G + PL S
Sbjct: 3 IASLIGILGAIGMIMWAM-LSGGGLGTFIDTPSVLIVFGGTFFAVMYTTPLATFLGSFGV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F Q+ D+++ + L +K E
Sbjct: 62 MGKAFLPPIKKQE---DLIERMVELAGIARKDGMMALEGQ-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F M+M++ G A ++ +++EI + + + + PA+G++G
Sbjct: 100 VPDKFFSKGMQMLVDG-ADETKLTAQLNQEIKAMKMRHESNQNVVKAWIDIAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GN++ PK +G A+ V+L TL G ++ L P+ ++++ + +
Sbjct: 159 LVGLVLMLGNMAD-PKAIGPAMAVALLTTLYGAFIANVLFAPMLTKLEGYTTYEVTYREM 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V L G P+ + LP + +E
Sbjct: 218 VVAGLRNIARGESPRNIQDQLVSNLPPKIQQKLEEA 253
>gi|172062648|ref|YP_001810299.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
gi|171995165|gb|ACB66083.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
Length = 254
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 97/258 (37%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GG +L Q +VIV G LG ++ N D+
Sbjct: 3 LLTLAGVVLGGAAIVFGFALEGGRFSMLFQFEALVIVLGGTLGAVMIQNTWARFFDAVKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F Q+ L L K E+ ++ +
Sbjct: 63 LRLAF---VRAQEVDRKHLTDLLEWGDRAKLDGLLAFES-----------------MDVS 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + +E+ + E+D +L G P GI+G+
Sbjct: 103 GIHPFARRGLELLANGVSTA-VLEDALHRELDAYERSRLAAARVWHQAGGYAPTFGILGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+++ ++ + P LG I V+ TL G+ + + PL ++++ + R +
Sbjct: 162 VLGLVQVTSHILE-PAQLGPGIAVAFIATLYGLAFANLVFLPLYGKLRAQIDSELRFRKL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|332141876|ref|YP_004427614.1| flagellar motor protein PomA [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551898|gb|AEA98616.1| flagellar motor protein PomA [Alteromonas macleodii str. 'Deep
ecotype']
Length = 253
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 109/275 (39%), Gaps = 25/275 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I I+ GG+ + I I+IV G L + L +G
Sbjct: 3 LATVIGMLGAIGFIVMAMIL-GGSLGMFIDVQSILIVFGGTLFVVLSQFTLGQFFGAGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + ++++ + + +KG E
Sbjct: 62 AGKAFMFKIESPE---ELIEKIVEMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G+ + + ++I + MG+ PA+G++G
Sbjct: 100 ISNEFMQKGVDMLVDGHDIE-VVRETLAKDISMTSERHDFGASFFKGMGDIAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G + +C P+ ++ ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAFFANVICLPIAFKLSVRAGEEKLNQSL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
V ++ +G P+V + L S+R S E
Sbjct: 218 VLDGIVGIADGQNPRVIEGVLKNYLAASKRGSAEE 252
>gi|303248272|ref|ZP_07334534.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302490297|gb|EFL50209.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 252
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 109/271 (40%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T +GL I ++G MGG + I+IV G L +A P+ ++ + +
Sbjct: 3 LGTFLGLASGIALVLGA-IFMGGTLTEFVNGPSIMIVVGGTLASICVAYPMGEVRQAFAA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
+++IF + + +V+ ++ + ++ EN H ++ I ++ +
Sbjct: 62 MMQIFSSRKVRDA---EVVNMMVRIAEISRREGLIALENIHTEN----AILKKACQLIAD 114
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
N I D +R+ EI + + P+ G++G
Sbjct: 115 NADPALIRDTVRI-----------------EIGSMKRRHAVGEAVFKSLAGYAPSFGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + L+ PK LG A+ V++ T G ++S P+ ++++ L +
Sbjct: 158 TLIGLVQMLTRLND-PKTLGPAMAVAIITTFYGSMMSTLFFLPVAGKLRARTLNETLQLE 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + + P++ E + ER
Sbjct: 217 IIFEGAKCILENNNPRLVYEKLSSFIAPRER 247
>gi|120553255|ref|YP_957606.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120323104|gb|ABM17419.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 258
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 25/269 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IGL IL I G +P + I P ++IV G L + L D+
Sbjct: 4 ATLIGLVGAILLISSAIIL-GASPGMFINPPSLLIVIGGTLLVVLAKFSLAQFFDAFKVA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F +K + L + +K E
Sbjct: 63 ARAFKFKLPETQASIEE---LVEIANIARKEGVLGIEGR-------------------EV 100
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ F+ ++M++ G + I+ L+++E + L + M + PA+G++G +
Sbjct: 101 SSPFLGQGIQMLVDGQDGN-TIKQLLNKERLMTLEHNRSGAKVFTAMADVAPAMGMIGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ + N+ + PK +G A+ V+L TL G +++ + P+ ++ ++ R+ +
Sbjct: 160 IGLVQMLSNM-EDPKSIGPAMAVALLTTLYGAMIATMIATPIADKLSLRMTEEARMQSLY 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
AL+A G P++ + L ER
Sbjct: 219 IDALVAIQEGTNPRIIEQMLSSYLSPKER 247
>gi|170727810|ref|YP_001761836.1| flagellar motor protein PomA [Shewanella woodyi ATCC 51908]
gi|169813157|gb|ACA87741.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
Length = 255
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 113/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL I+G + GG I I I+IV +M LK S
Sbjct: 3 LATLIGLIGAFGFILGAMASSGG-IGIFIDVASILIVLCGSFFVVMMKYNLKQFFGSIKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D ++++ + +KG E
Sbjct: 62 AAKAFIFKIDKPD---ELIEQSVTMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + + ++++I + S +G+ PA+G++G
Sbjct: 100 ITNSFMQKAVDMLVDGHDGD-VVRDALEKDIALTEQRHKLGISIFSTVGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ ++L TL G +++ + P+ +++ ++ +
Sbjct: 159 LVGLVGMLSNMDD-PKSIGPAMAIALLTTLYGAMVANMVAIPIAGKLELRMNEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++A +G P+V + + + +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYISEKQR 247
>gi|24373102|ref|NP_717145.1| flagellar motor protein PomA [Shewanella oneidensis MR-1]
gi|24347291|gb|AAN54589.1|AE015599_1 chemotaxis motA protein [Shewanella oneidensis MR-1]
Length = 255
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 109/271 (40%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL + II GG + +VIV G +M LK +
Sbjct: 3 LATIIGLVGSFGFIIWSMVISGG-VMMFYDLASVVIVFGGSFFVVMMKFNLKQFLGAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + D+++ + +KG E
Sbjct: 62 AAKAFIFKIDRPE---DLIEQSVTMADAARKGGFLALEEA-------------------Q 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + ++++I + + PA+G++G
Sbjct: 100 ISNSFMQKAVDMLVDGH-DGEVVRAALEKDITLTEDRHRIGIAIFRAFADVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G ++ V+L TL G +L+ +C P+ ++ ++ +
Sbjct: 159 LVGLVAMLANMSD-PKSIGPSMAVALLTTLYGAVLANMVCIPIADKLSLRMGEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + L +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLAEKQRK 248
>gi|283853197|ref|ZP_06370450.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
gi|283571455|gb|EFC19462.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
Length = 252
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 103/270 (38%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T +GL I ++G MGG + ++IV G L +A PL+ + + +
Sbjct: 3 LGTFLGLASGIALVLGA-IFMGGTLMEFVNVPSVMIVVGGTLASICVAYPLEEVFQAFSA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+++IF + + +V+ ++ + ++ EN
Sbjct: 62 MMQIFSSRKVKDA---EVVNMMVRIAEISRREGLIALENI-------------------- 98
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
I +I NA I + EI + + P+ G++G
Sbjct: 99 HTDNTILKKACQLIADNADPALIRETVRIEIGSMKRRHAVGEAVFKSLAGYAPSFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + L PK LG ++ V++ T G +LS L P+ +++S L + I
Sbjct: 159 LIGLVQMLTRLDD-PKTLGPSMAVAIITTFYGSMLSTLLFLPVAGKLRSRTLNETLQLEI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + + P++ E + ER
Sbjct: 218 IFEGAKCILENNNPRLVYEKLSSFIAPKER 247
>gi|88798990|ref|ZP_01114571.1| Flagellar motor component [Reinekea sp. MED297]
gi|88778217|gb|EAR09411.1| Flagellar motor component [Reinekea sp. MED297]
Length = 244
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 100/253 (39%), Gaps = 22/253 (8%)
Query: 12 LCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALG 71
+ GG GG L +IV G L ++ + + + IF L
Sbjct: 12 FAVFGGHLLEGGQAGSLSNFPAALIVLGGTLAAGMIQAAPRTWRTAWTLFPAIFWRNHL- 70
Query: 72 QDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
D+ +LKL+ + G + DP + E F+ ++
Sbjct: 71 -DSEQTLLKLVRWCQLARRSGPLSL------DPES------------GKEPDPFLRLGLQ 111
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+I+ G + ++ + + + E LK +G P +GI+GA+LG+I+ M +
Sbjct: 112 LIVDGADKD-KLRHNLTIATEARENEWLKGADFFDSLGGYAPTMGIIGAVLGLIQVMTQI 170
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
+ + +G I + T+ G+ L+ P+ +++S + + + + L++ ++G
Sbjct: 171 EDT-QAIGLGIATAFVATIYGVGLANLFFLPVAGRLRSEAMTRSQQEEMALDGLLSILDG 229
Query: 252 AIPQVAIEYGRKV 264
P++ R+
Sbjct: 230 ENPRMLERRLREY 242
>gi|332533103|ref|ZP_08408972.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037385|gb|EGI73839.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
Length = 254
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 104/272 (38%), Gaps = 24/272 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+I GL + + I G+ GG L ++IV G LG ++ K
Sbjct: 4 LSIFGLLVALSAIGLGYSLEGGVVSALFNGPALIIVLGGTLGAVMLQTSASTFKKMINMS 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F D ++ + + ++ EN
Sbjct: 64 SWVFVAPQY---DIEDAIEQVKRWSHKARQEGYLALENE-----------------ALAH 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ + +++ G ++ + ++ ++ + L+ MG P IGI+GA+
Sbjct: 104 PDAYAAKGLSLLVDG-CSEQKLRDTLEIDLLLERDRLLEAARVYEAMGGYSPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+AM ++ P++LG + + T+ G+ L+ L P+ +++K ++ + ++
Sbjct: 163 LGLIQAMSFITD-PQMLGAGVATAFIATIYGVGLANLLFLPMANKLKQRVEQKMLYHEML 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ +IA G P ERP++
Sbjct: 222 AEGVIAISIGESPVNIELKLEAY--RVERPNL 251
>gi|90579838|ref|ZP_01235646.1| flagellar motor protein [Vibrio angustum S14]
gi|90438723|gb|EAS63906.1| flagellar motor protein [Vibrio angustum S14]
Length = 253
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL I+ GG+ + I+IV G +M + +
Sbjct: 3 LATLIGLLGAFAFIVMAMLL-GGDLVMFYDTSSILIVLGGSTFVVLMKYNIGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K + +++ + + +KG E E
Sbjct: 62 AIKAFMFKTDNPE---ELIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G+ + + + ++I + + S G+ PA+G++G
Sbjct: 100 ITNPFMRKGIDMLVDGH-DADVVRGTLQKDISLTNERHEQGVGIFSSFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +L+ + P+ ++ + ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGSMLANMVAIPIADKLTLRKEQERLNKRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 ILDGVLAIQDGQNPRVIDGYLKNYLHEKKR 247
>gi|90408166|ref|ZP_01216334.1| flagellar motor protein [Psychromonas sp. CNPT3]
gi|90310696|gb|EAS38813.1| flagellar motor protein [Psychromonas sp. CNPT3]
Length = 257
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ II GG + I I+IV G L +M L +
Sbjct: 3 LATLLGILGAFGFIIMAMLI-GGTMDMFIDTTSILIVFGGSLFVVMMKYNLGQFLGAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K+ + +++ + +KG E
Sbjct: 62 AMKAFLHKSDTPE---ELIAKAVEMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G+ + + + +I + G+ PA+G++G
Sbjct: 100 ISNAFMQKGVDMLVDGH-DADVVRATLANDIRLTADRHEVGADIFKQFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +++ +C P++ ++K ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAMVANMVCLPISDKLKLRAAEEKLNKSL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++ +G P+V R LP S+R
Sbjct: 218 ILDAVLGIQDGQNPRVIEGLLRNYLPESKR 247
>gi|88858086|ref|ZP_01132728.1| putative Chemotaxis motA protein [Pseudoalteromonas tunicata D2]
gi|88819703|gb|EAR29516.1| putative Chemotaxis motA protein [Pseudoalteromonas tunicata D2]
Length = 255
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 22/263 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+ G+ I +L I G+ GG LI ++IV G LG ++ +P
Sbjct: 4 LSFFGILIALLAIGIGYKIEGGLVASLINFPALLIVLGGTLGAVMLQSPSAQFFCGLKMF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F D + + + ++ E L + E
Sbjct: 64 KWVFVPPKHRVD---EGISKIKNWSQKARQDGYLSLEKE---------------ALASKE 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI + M+I G + + + M+ E+ LK MG P IGI+GA+
Sbjct: 106 --HFINKGLNMLIDG-VEAEQFRSAMEIELLFQRESLLKSAKIYEAMGGYSPTIGILGAV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+AM + Q P++LG I + T+ G+ + L P+ ++++ ++ ++
Sbjct: 163 LGLIQAMSFIKQ-PEMLGAGIATAFIATIYGVGFANLLFLPIANKLRFLIEQKMLYNELL 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKV 264
+ ++A + G P
Sbjct: 222 AEGMLAILQGDTPHSIELKLSAF 244
>gi|239905905|ref|YP_002952644.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239795769|dbj|BAH74758.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 252
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 107/270 (39%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T +GL I ++G MGG+ I ++IV G + +A P++ + + +
Sbjct: 3 LGTFLGLASGISLVLGA-IFMGGSLREFIDIPSLMIVVGGTIASTCVAFPVREVMQAFSA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L+IF + + +V++++ + ++ EN
Sbjct: 62 MLQIFSSRKVSDA---EVVEMMVRIAEISRREGLLALENI-------------------- 98
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ I +I NA I + EI + + P+ G++G
Sbjct: 99 QTDNAILKKACQLIADNADPALIRETVRIEISSMKRRHAVGEAVFKSLAGFAPSFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ +G L + PK +G A+ V++ T G +LS P+ ++++ + + I
Sbjct: 159 LIGLVQMLGRL-EDPKSVGPAMAVAIITTFYGSLLSTLFFLPVAGKLRARTISEAHQLDI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + + P++ E + ER
Sbjct: 218 IFEGAKCILQNNNPRLVYEKLSSFIAPKER 247
>gi|113971063|ref|YP_734856.1| flagellar motor protein PomA [Shewanella sp. MR-4]
gi|114048293|ref|YP_738843.1| flagellar motor protein PomA [Shewanella sp. MR-7]
gi|113885747|gb|ABI39799.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113889735|gb|ABI43786.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
Length = 255
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 109/271 (40%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL I+ GG I I I IV G +M LK +
Sbjct: 3 LATVIGLVGGFGFILWAMMTSGG-IAIFIDVPSIFIVFGGSFFVVMMKFNLKQFFGAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K + D+++ + +KG E
Sbjct: 62 AIKAFMFKIDKPE---DLIEQSVTMADAARKGGFLALEEA-------------------Q 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + ++++I + G+ PA+G++G
Sbjct: 100 ISNSFMQKAVDMLVDGH-DGEVVRAALEKDIALTEERHRNGIAIFRAFGDVGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G ++ V+L TL G +++ + P+ ++ ++ +
Sbjct: 159 LVGLVAMLSNMSD-PKSIGPSMAVALLTTLYGAVVANMVAIPIADKLTLRMGEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + L +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLAEKQRK 248
>gi|46204687|ref|ZP_00049615.2| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 168
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 87/166 (52%), Positives = 116/166 (69%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
FICDY R+I++GNARS+EIE LM+EEI LKPY AI+ + E+LPA+GIV A+LGI
Sbjct: 3 FICDYCRLILIGNARSHEIEALMEEEIGTHKKSVLKPYGAINTVAEALPALGIVAAVLGI 62
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+KAMG L QSP+ILG IG +L GT G+ SY + PL ++K R KQ Y I+K+
Sbjct: 63 VKAMGALDQSPQILGGLIGAALVGTFFGVFASYGVLAPLAIKVKGVREKQCAPYTIIKQT 122
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
LIAYMNGA+PQVAIE+GRK + ++RP+I+ V + + A+
Sbjct: 123 LIAYMNGALPQVAIEHGRKGIAGADRPTIDEVESATVPGARAEAAA 168
>gi|15639712|ref|NP_219162.1| flagellar motor rotation protein (motA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025950|ref|YP_001933722.1| flagellar motor rotation protein [Treponema pallidum subsp.
pallidum SS14]
gi|3024158|sp|O07886|MOTA_TREPA RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|2196895|gb|AAB61253.1| MotA [Treponema pallidum]
gi|3323026|gb|AAC65690.1| flagellar motor rotation protein (motA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018525|gb|ACD71143.1| flagellar motor rotation protein [Treponema pallidum subsp.
pallidum SS14]
gi|291060089|gb|ADD72824.1| chemotaxis protein MotA [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 259
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 100/274 (36%), Gaps = 23/274 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++ IGLF II G GG+ L ++I G + PL
Sbjct: 3 IASFIGLFGGFAIIIFGAVL-GGSARGLFHVPSLLITVGGSYLTLFLTYPLSYAVGVFRV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + ++++ LY L ++ E I D
Sbjct: 62 IARVFHAADFHER---EIVQRLYALAEKSRRTGLLALEEEIQD----------------- 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +R ++ G I+ LM+ E+ + ++ P G++G
Sbjct: 102 FDDDFVRTGLRNVVDG-VDGDAIKALMESELTHMEDRHNTWISLLNSWAALAPGYGMLGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + L + LG+ + +L T G ++ P+ ++++ + + +
Sbjct: 161 VMGLIGMLATL-EDKSSLGSNMATALITTFYGSLVQNWFITPVATKLQYQHDLEVKSKEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
V + +++ G P+V + L R +E
Sbjct: 220 VIEGVLSIQAGDHPRVLAQRLLTYLSPKMRKELE 253
>gi|307727323|ref|YP_003910536.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307587848|gb|ADN61245.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 254
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 97/258 (37%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G+ + I+ GF GGN LIQ VIV G L ++ N D
Sbjct: 3 LLTVFGVVFGVAAIVAGFSLEGGNFTSLIQLEAFVIVLGGTLAAVMIQNTWARFYDGVKL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F KA D L +L K E+ +E
Sbjct: 63 LRFAF-VKARQVDRKS--LSILLEWGDQAKLNGMLVFES-----------------IEAK 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ F + ++ G + +E+ + E+D + G P GI+GA
Sbjct: 103 GISPFAKRGLELLANGVTTA-VLEDALQREVDAYERNCMAAARIWQQAGGYAPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ G++ + P LG I V+ TL G+ L+ + PL +I++ + R +
Sbjct: 162 VLGLIQVTGHMLE-PSQLGQGIAVAFVATLYGLALANLVFLPLFGKIRAQVDSELRFRRL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|261252276|ref|ZP_05944849.1| Flagellar motor rotation protein MotA [Vibrio orientalis CIP
102891]
gi|260935667|gb|EEX91656.1| Flagellar motor rotation protein MotA [Vibrio orientalis CIP
102891]
Length = 254
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 109/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL +I GG+ + I I+IV G +M + +
Sbjct: 3 LATLVGLLGGFAFVIMAMIL-GGSIMMFIDVTSILIVVGGSTFVVLMKFTMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DEPEDLIAKVVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + + + ++I + G+ PA+G++G
Sbjct: 100 ITNGFMQKGIDLLVDGH-DADVVRAALQKDIVLTDERHDFGGSVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAILSNMVFFPIADKLSLRREQEKLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V ++A +G P+V Y + L +R
Sbjct: 218 VMDGVLAIQDGQNPRVIDSYLKNYLNEGKR 247
>gi|268679795|ref|YP_003304226.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
gi|268617826|gb|ACZ12191.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
Length = 258
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 102/269 (37%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ I+G+ I+I I G GGNP ++ +IV + + + ++ +
Sbjct: 3 LTVILGMVISIASIAIGDIMEGGNPLHVLHITSFIIVVPTAMASAMTGTHPEYVRAAFKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + +K + L ++ E H N
Sbjct: 63 IKLVFKKSPVDLHAR---IKQIIDLAVIARRDGILALETH-----------------ANA 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + M + G ++EIE ++ ++ H GES P IG++GA
Sbjct: 103 MDDEFFKKGLSMAVDGT-EAHEIEETLEIMLEETEEYYHGAAHYWLLAGESCPVIGLIGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I A+ L +P + I + T T+ GI +Y P +++K+ + +
Sbjct: 162 VLGLILALQKL-DNPAEMAAGIAGAFTATVTGIAGAYIFMGPWGNKLKAKSHDFIKEKKV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ ++ +G P++ L E
Sbjct: 221 ILAGILGISHGDNPRMLETKLLNYLSPME 249
>gi|296156472|ref|ZP_06839310.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295893071|gb|EFG72851.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 254
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 92/258 (35%), Gaps = 22/258 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ G + I+ GF GG+ L Q VIV G G ++ N D
Sbjct: 3 LLTLFGAVFGVTAIVVGFSLEGGHFTSLFQLEAFVIVVGGTFGAVMIQNTWARFYDGLKQ 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + L +L K E+ +
Sbjct: 63 LRLAF---VKARQVDRETLAVLLEWGDQAKLNGMLVFES-----------------IGAG 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F + ++ G + + +E+ + E+ + G P GI+GA
Sbjct: 103 GINPFAQRGLELLANGVSTA-VLEDALQRELLAYERNHMAAARIWQQAGGYAPTFGILGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+ G+L + P LG I ++ TL G+ L+ + PL +I++ + R +
Sbjct: 162 VLGLIQVTGHLLE-PAQLGQGIAMAFVATLYGLALANLVFLPLYGKIRAQVDSELRFRRL 220
Query: 241 VKKALIAYMNGAIPQVAI 258
L+A P
Sbjct: 221 YLDGLLAISRKESPHTIE 238
>gi|89073142|ref|ZP_01159681.1| flagellar motor protein [Photobacterium sp. SKA34]
gi|89051095|gb|EAR56552.1| flagellar motor protein [Photobacterium sp. SKA34]
Length = 253
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL I+ GG+ + I+IV G +M + +
Sbjct: 3 LATLIGLLGAFAFIVMAMLL-GGDLVMFYDTSSILIVLGGSTFVVLMKYNIGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
++ F +K + +++ + + +KG E I +P
Sbjct: 62 AIKAFMFKTDNPE---ELIAKIVEMADAARKGGFLALEEMEISNP--------------- 103
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + M++ G+ + + + ++I + + S G+ PA+G++G
Sbjct: 104 -----FMRKGIDMLVDGH-DADVVRGTLQKDISLTNERHQQGVGIFSSFGDVAPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + N+ PK +G A+ V+L TL G +L+ + P+ ++ + ++
Sbjct: 158 TLIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGSMLANMVAIPIADKLTLRKEQERLNKR 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++A +G P+V Y + L +R
Sbjct: 217 LILDGVLAIQDGQNPRVIDGYLKNYLHEKKR 247
>gi|163749514|ref|ZP_02156762.1| flagellar motor protein [Shewanella benthica KT99]
gi|161330923|gb|EDQ01850.1| flagellar motor protein [Shewanella benthica KT99]
Length = 255
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL IIG GG I I ++IV +M LK S
Sbjct: 3 LATLIGLIGAFGFIIGAMATSGG-VGIFIDTASVLIVICGTFFVVMMKYNLKQFLGSVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D ++++ + +KG E
Sbjct: 62 GAKAFIFKIDKPD---ELIEQSVNMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + + ++++I + + +G+ PA+G++G
Sbjct: 100 INNSFMRKAVDMLVDGHDGD-VVRDALEKDIALTEQRHKMGISIFTAIGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ ++L TL G +++ + P+ ++ ++ +
Sbjct: 159 LVGLVGMLSNMDD-PKSIGPAMAIALLTTLYGAMIANMVAIPIAGKLGLRMAEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++A +G P+V + + L +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLSERQR 247
>gi|154174624|ref|YP_001408143.1| chemotaxis protein PomA [Campylobacter curvus 525.92]
gi|112802822|gb|EAU00166.1| chemotaxis protein PomA [Campylobacter curvus 525.92]
Length = 254
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 103/272 (37%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G +T++ + G G I I+IV G +G ++ ++ +K
Sbjct: 3 LGTVVGWVLTLVLLFGSMAI-GVGIGPYIDVPSIMIVFGGTIGVMMVGFKMETLKSVFKF 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +K + +K EN + NN
Sbjct: 62 YGIAVKPTQINLAA---TIKKIVDYSTKARKDGILALENDV-----------------NN 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E+ F+ + M + GN I L++ ++D +G A+G++G
Sbjct: 102 EVNQFLKKGLSMAVDGN-EPDAIRALLEIDMDQSSARHTNNIKIFEQVGGFAGAMGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N++ P +G ++ V+L TL G ++ + P+ + + + +
Sbjct: 161 LIGLVAMLLNMAD-PSAIGPSMAVALLTTLYGAMIGNIIGAPVGNILSIRDADEALEKQV 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
V + +++ G P+ LP +R S
Sbjct: 220 VLEGIMSIQAGDNPRTLEAKLLAFLPPKDRKS 251
>gi|109897647|ref|YP_660902.1| flagellar motor protein PomA [Pseudoalteromonas atlantica T6c]
gi|109699928|gb|ABG39848.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
Length = 254
Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats.
Identities = 52/276 (18%), Positives = 111/276 (40%), Gaps = 27/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I +I GG+ + I+IV L + L +G
Sbjct: 3 LATLIGMIGAIGFVIMAMVL-GGDLGMFFNVPSILIVVCGSLFVVLSQFTLGQFFGAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
+ F +K ++ + + + +KG E I++
Sbjct: 62 AGKAFMFKIESPESQIEKI---VEMADAARKGGFLALEEAQIEN---------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + M++ G+ + M ++I + MG+ PA+G++G
Sbjct: 103 ----EFMQKGVDMLVDGHDVD-VVRATMAKDISMTTERHEFGATIFKGMGDVAPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + N+ PK +G A+ V+L TL G +L+ +C P+ ++ + +++
Sbjct: 158 TLIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVLANVVCLPIAEKLGNRAVEEKLNQS 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++ +I +G P+V + L S+R S
Sbjct: 217 LILDGIIGIADGQNPRVIEGILKNYLAASKRGSATE 252
>gi|320538204|ref|ZP_08038099.1| putative chemotaxis protein PomA [Treponema phagedenis F0421]
gi|3024169|sp|Q56331|MOTA_TREPH RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|1399285|gb|AAB03250.1| MotA [Treponema phagedenis]
gi|320145021|gb|EFW36742.1| putative chemotaxis protein PomA [Treponema phagedenis F0421]
Length = 259
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 48/282 (17%), Positives = 104/282 (36%), Gaps = 26/282 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++ IG F I+ G GG+ + I G +A PL
Sbjct: 3 LASFIGFFGAFAIILMGGIL-GGSASGFFHLPSVFITVGGSYLTLFLAYPLSYTLGIFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + ++++ LY L ++ E I D
Sbjct: 62 CARVFKSADFHEK---EIVQRLYALAEKSRRTGLLALEEEIQD----------------- 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ +R ++ G I NLM+ E+ + + I+ P G++G
Sbjct: 102 FDDEFMRTGLRNVVDG-IDGEAIRNLMENELSHMEERHNRWISFINAWATLAPGYGMLGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + L + LG + V+L TL G +++ L P+ +++ + + +
Sbjct: 161 VMGLIGMLMAL-EDKSSLGQNMAVALVTTLYGSLMANWLLIPMATKLGLQHEAEVKSKEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+ + ++A G P++ + L ++ + E+++
Sbjct: 220 IIEGVLAIQAGDHPRILAQRLLVYLNPKDK---RELEAELIK 258
>gi|317153789|ref|YP_004121837.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316944040|gb|ADU63091.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 250
Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 107/272 (39%), Gaps = 25/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++GL + + I+G GG + I ++IV G L ++A P + + +
Sbjct: 3 IVTLLGLAVGLSLILGAIVI-GGAIDVFINVPGMMIVIGGTLASIMVAFPFEEVIQGFNA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++F + DV+ ++ + ++ E N
Sbjct: 62 GFKMF---VQRKTKVRDVVNIMVKVAEISRREGLVALE--------------------NV 98
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +I NA I + EI+ + +G P+ G++G
Sbjct: 99 QTENMVLKKSCQLIADNADPALIRTTLAIEINSMRRRHQVGQDVFKRLGTLAPSFGMMGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + L PK +G A+ V+L T G +S + P+ +++K+ L++ +
Sbjct: 159 LIGLVQMLSKLDD-PKSIGPAMAVALLTTFYGSAMSTLVFIPMAAKLKARTLQEQLHLEV 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + + + P++ E L ER +
Sbjct: 218 IFEGAKSILENNNPRLVYEKLSSFLAPHERET 249
>gi|332307429|ref|YP_004435280.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174758|gb|AEE24012.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 254
Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 111/276 (40%), Gaps = 27/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I +I GG+ + I+IV L + L +G
Sbjct: 3 LATLIGMIGAIGFVIMAMVL-GGDLGMFFNVPSILIVVCGSLFVVLSQFTLGQFFGAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLEN 119
+ F +K ++ + + + +KG E I++
Sbjct: 62 AGKAFMFKIESPESQIEKI---VEMADAARKGGFLALEEAQIEN---------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + M++ G+ + + ++I + MG+ PA+G++G
Sbjct: 103 ----EFMQKGVDMLVDGHDVD-VVRATLAKDISMTTERHEFGATIFKGMGDVAPAMGMIG 157
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + N+ PK +G A+ V+L TL G +L+ +C P+ ++ + +++
Sbjct: 158 TLIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVLANVVCLPIAEKLGNRAVEEKLNQS 216
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++ +I +G P+V + L S+R S
Sbjct: 217 LILDGIIGIADGQNPRVIEGILKNYLAASKRGSATE 252
>gi|218133671|ref|ZP_03462475.1| hypothetical protein BACPEC_01540 [Bacteroides pectinophilus ATCC
43243]
gi|217991046|gb|EEC57052.1| hypothetical protein BACPEC_01540 [Bacteroides pectinophilus ATCC
43243]
Length = 269
Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 92/253 (36%), Gaps = 21/253 (8%)
Query: 25 PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYI 84
+ + I G + + LK + S+ IF + V+ +
Sbjct: 30 LLNFVDIPSLFITVGGTFSSTLTSYKLKDFLNGLKSISIIFKSPEI---DNVSVINRIIE 86
Query: 85 LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIE 144
L +K E + + F+ + ++IV +
Sbjct: 87 LSNVARKEGLLALEE-----------------VASGLEDEFMKKGI-LLIVDGTEPELVR 128
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
+++ E+D + + + PA G++G ++G+I + + +G +
Sbjct: 129 GILETEMDFMEERHSRLAGFWDTIASMGPAWGMIGTLIGLINMLKAMGDDMSAIGPNMAT 188
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKV 264
+L TL G +++ + P ++++K K+++ +V + L++ G P+V E +
Sbjct: 189 ALITTLYGSVIANWIAIPTSNKLKDISAKEYQSRALVVEGLLSIQAGENPRVIEEKLKSF 248
Query: 265 LPLSERPSIEIVA 277
L ++R I
Sbjct: 249 LSPADREGINPQE 261
>gi|127513696|ref|YP_001094893.1| flagellar motor protein PomA [Shewanella loihica PV-4]
gi|126638991|gb|ABO24634.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
Length = 255
Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL IIG + GG I + ++IV L +M LK +
Sbjct: 3 LATLIGLIGAFGFIIGAMVSSGG-IAIFVDVPSVLIVMIGSLFVVMMKFNLKQFLGAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D ++++ + +KG E
Sbjct: 62 AAKAFMFKIDKPD---ELIEQSVTMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + ++++I + +G+ PA+G++G
Sbjct: 100 ISNSFMQKAVDMLVDGH-DGEVVREALEKDIALTEERHKTGISIFKALGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G I++ + P+ ++ ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAIIANMIALPIADKLSLRMGEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++A +G P+V + + L +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLSEKQR 247
>gi|157962806|ref|YP_001502840.1| flagellar motor protein PomA [Shewanella pealeana ATCC 700345]
gi|157847806|gb|ABV88305.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 255
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 109/271 (40%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG I I I+IV L +M LK S
Sbjct: 3 LATLIGLIGAFAFVIMAMV-SGGGIGIFINVPSILIVMIGTLFVVMMKYNLKQFLGSAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + D+++ + +KG E
Sbjct: 62 AAKAFIFKLDKPE---DLIEQSISMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + + ++++I + +G+ PA+G++G
Sbjct: 100 ISNSFMQKAVDMLVDGHDGD-VVRDALEKDIALTEERHRTGIGIFKSIGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +++ + P+ ++ ++ +
Sbjct: 159 LIGLVGMLSNMDD-PKSIGPAMAVALLTTLYGAVVANMVALPIADKLSLRMNEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + L R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLSEKSRK 248
>gi|183219621|ref|YP_001837617.1| chemotaxis MotA protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909760|ref|YP_001961315.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774436|gb|ABZ92737.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778043|gb|ABZ96341.1| Chemotaxis MotA protein; putative membrane protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 260
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 86/259 (33%), Gaps = 23/259 (8%)
Query: 19 YAMGG-NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
GG + LI ++I G +++ P G + F
Sbjct: 20 VVSGGLSLTDLIDIPSVMITFGGAAAATIISFPWTSTIGVGAVTKKAFQNP---PSDLPG 76
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
++ L ++ E+ I N F+ +++++ G
Sbjct: 77 LITTLVSFSEKARREGLLALEDDI-----------------NELPEEFLKKGIQLVVDGT 119
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-SPK 196
+ N+M+ EI P G++G ++G++ + NL
Sbjct: 120 -DPELVRNIMETEIGNTAARHAYGRGWWDAYAGFAPGFGMLGTLVGLVGMLKNLGGGDAS 178
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+G + +L TL G + P+ ++ + + ++ + ++ +G P++
Sbjct: 179 AIGQGMATALITTLYGSLAQNLFAAPVVRKLTRRSEDELVIKQVMVEGTLSIQSGDNPRI 238
Query: 257 AIEYGRKVLPLSERPSIEI 275
E L +ER +++
Sbjct: 239 VKEKLASFLTPAERTALKD 257
>gi|86750475|ref|YP_486971.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86573503|gb|ABD08060.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 257
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 98/271 (36%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
++T+IGL ++ MGGN + ++++ G ++ PL + +
Sbjct: 3 IATLIGLIAG-AVVVSSLILMGGNFGMFYDIHAVIVIFGGSFAATLIRFPLSAMLHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F L D L + + + E
Sbjct: 62 GAKFAFTMSNLSARDLVDELARIAEIARKSGPVGLEKVEAD------------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + ++ + D L + +G+ PA G++G
Sbjct: 103 ---DPFLAKGIRYVADGYDLEF-IRDNLERDRDNFLLHLNEGSKIYRAIGDCAPAFGMIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LG+++ N+ Q P LG + V+L TL G +++ +C P+ ++ + +
Sbjct: 159 TLLGMVQMFSNM-QDPSKLGPFMAVALLATLYGAVVANLVCLPIADKLHGKLVDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 218 LIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|157376458|ref|YP_001475058.1| flagellar motor protein PomA [Shewanella sediminis HAW-EB3]
gi|157318832|gb|ABV37930.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 255
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I + GG I I ++IV L +M LK S
Sbjct: 3 LATLIGLIGAFGFVIMAMVSSGG-IAIFIDVPSVLIVICGSLFVVMMKYNLKQFLGSIKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D +++ + +KG E
Sbjct: 62 AAKAFIFKIDKPDA---LIEQSITMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + + ++++I + +G+ PA+G++G
Sbjct: 100 IGNSFMQKAVDMLVDGHDGD-VVRDALEKDIALTEERHKLGVSIFQALGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +++ + P+ +++ ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVVANMVAIPIAGKLELRMKEEMMNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++A +G P+V + + + +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYISEKQR 247
>gi|239787604|emb|CAX84072.1| MotA/TolQ/ExbB proton channel protein [uncultured bacterium]
Length = 250
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 108/270 (40%), Gaps = 25/270 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+TIIG + + G MGG + + I+IV G + + + + + + L
Sbjct: 4 ATIIGFVFGLALMFGA-ILMGGQLGMFVDIPSILIVFGGTMATLFIRHKMSEVFGAFGIL 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++ F K+ ++ + + + +K E +
Sbjct: 63 MKAFLVKSH---DIHQIISQIVEMSHIARKDGILALE-------------------KVKS 100
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + + G ++ +E L+ +E+ + ES PA G++G +
Sbjct: 101 RDEFMQKAINHCVDGADPAF-LEKLLAKELSYQKDRHRNGVGIFEGIAESAPAFGLLGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ + ++ P +G + ++L T GI ++ + P++ ++ + ++ + ++
Sbjct: 160 IGLVQMLVHMDD-PATIGPGLAMALVSTFYGIFIANMVAIPISYKLMAYSKEEQMVRQVI 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+I G P++ +E VLP S R
Sbjct: 219 IDGMIGIQKGVNPRMLLESLIAVLPPSGRK 248
>gi|91976555|ref|YP_569214.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91683011|gb|ABE39313.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 257
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 101/271 (37%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
++T+IGL ++ ++ MGGN + ++I+ G ++ PL + +
Sbjct: 3 IATLIGLVAGVI-VVSTLILMGGNFGMFYDIHAVIIIFGGSFAATLIRFPLSAMLHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F +L D L + + + E
Sbjct: 62 GAKFAFTMSSLSARDLVDELARIAEIARKSGPVGLEKVETD------------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + ++ + D L + +G+ PA G++G
Sbjct: 103 ---EPFLAKGIRYVADGYDLEF-IRDNLERDRDNFLLHLNEGSKIYRAIGDCAPAFGMIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LG+++ N+S P LG + V+L TL G +++ +C P+ ++ + +
Sbjct: 159 TLLGMVQMFSNMSD-PSKLGPFMAVALLATLYGAVVANLICLPIADKLHGKLVDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 218 LIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|294827704|ref|NP_710843.2| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
gi|293385547|gb|AAN47861.2| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
Length = 244
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 23/263 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T +GL + L ++ G + + +++ G G + L IKD ++L
Sbjct: 4 TFVGLSVAFLSVLIAILLEGAHFLSFFKISAFLLIVGGTAGATFASFSLGQIKDLVLNLQ 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
K + +L +K E+++ +
Sbjct: 64 RSVFPKR-----KLPLGELFLDFAERARKNGLLSLEDNLKSIQD---------------- 102
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ +++I+ G +E ++ E + ++ + G P +GI+G ++
Sbjct: 103 -PFLQRGIQLIVDGT-DPRAVEEILFESAMAMEDKETNSAKILETAGGFSPTVGIIGTVM 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G++ + NL K LG I + T GI + L PL ++IKS +Q +
Sbjct: 161 GLVGVLENLGAGTKALGEGIATAFIATFYGIAFANLLFFPLANRIKSWSKEQSDRRQAII 220
Query: 243 KALIAYMNGAIPQVAIEYGRKVL 265
+ +IA +G ++ +E +
Sbjct: 221 RGVIALQSGDNRRILMERMNPFI 243
>gi|149193958|ref|ZP_01871056.1| motility protein a-flagellar motor component [Caminibacter
mediatlanticus TB-2]
gi|149135911|gb|EDM24389.1| motility protein a-flagellar motor component [Caminibacter
mediatlanticus TB-2]
Length = 255
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 108/272 (39%), Gaps = 22/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++IG+ + II AMG I P ++IV + ++N ++++
Sbjct: 3 LASVIGIVGALGLIIAAM-AMGVGVGPYIDPQSVLIVVLGSIMTLFISNKMEMMTKFAKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ Q Y +++K L ++ E +
Sbjct: 62 FMIAIKPS--YQPNYEELIKKLVDYATQARRDGILSLEQAAAN----------------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + M + GN I L++ +++ + K S+ A+G++G
Sbjct: 103 EEDEFLKKGLSMAVDGN-EPDTIRELLEIDLEQMDARHKKMASIFSNWAGLAGAMGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S P +G A+ V+L TL G ++ +P+ +++ + +
Sbjct: 162 LVGLVAMLLNMSD-PAAIGPAMAVALLTTLYGAMIGNIFGSPIANKLALRNDDEILAKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + +++ G P+ LP S+R S
Sbjct: 221 IIEGIMSIQAGDNPRTLEAKLLSFLPPSQRKS 252
>gi|254492042|ref|ZP_05105219.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224462739|gb|EEF79011.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 254
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 108/274 (39%), Gaps = 25/274 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + I+ G + IV G +M L S +
Sbjct: 3 LATLLGLIVAWGLIVATIVL-GAAASTFVNMPSFAIVIGGTFAVVLMRFTLGQFIGSMKT 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F YK+ + D + L +K E +
Sbjct: 62 ATKAFMYKSESPEEIID---FVVELAGIARKEGLLSLE-------------------KQE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + M++ G+ ++ + E++ L +G++ PA+G++G
Sbjct: 100 ITNPVLAKGINMLVDGH-EPGVVKKALLTEMNETLNRHSIGQQIFKAIGDAAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+S PK +G A+ V+L TL G +L+ P+ ++ ++ I
Sbjct: 159 LVGLVQMLTNMSD-PKSIGPAMAVALLTTLYGAMLANMFALPIADKLSLRSSEELMNKTI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
+ ++++ G P+V E R LP S+R + E
Sbjct: 218 IIESVLGIQEGQNPKVLGEILRNFLPASKRENEE 251
>gi|160880838|ref|YP_001559806.1| MotA/TolQ/ExbB proton channel [Clostridium phytofermentans ISDg]
gi|160429504|gb|ABX43067.1| MotA/TolQ/ExbB proton channel [Clostridium phytofermentans ISDg]
Length = 266
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 106/272 (38%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGG--NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
+++++GL + ++ +I G G + ++I G + +P +
Sbjct: 3 LASVVGLVLAMILVIFGITIGDGFSAIMAFVDRDSVLITFGGAFFTVLAMSP--SFAEFF 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L + ++ + L +K E
Sbjct: 61 NGLKSFALILKPLPSNEKETIESIITLSNVARKEGLLALEEA-----------------A 103
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N+ F+ + ++IV + ++++ E+ I ++G PA G++
Sbjct: 104 NSIEDEFMKKGV-LLIVDGTDPELVRSILETELGCIEERHKSVIGFWDNLGAMGPAWGMI 162
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+I +G + + +G + V+L T G +L+ +C P+++++KS + +
Sbjct: 163 GTLIGLINMLGKM-EDVASVGPNMAVALVTTFYGSMLANWICLPVSNKLKSNNASEIMMK 221
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ + L++ G P+V E + L ++R
Sbjct: 222 EVMVEGLLSIQAGENPRVIEEKLKSFLSPAKR 253
>gi|316934821|ref|YP_004109803.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris DX-1]
gi|315602535|gb|ADU45070.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris DX-1]
Length = 257
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 98/271 (36%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
++T++GL ++ MGGN + ++++ G ++ PL + +
Sbjct: 3 LATLLGLAAG-AAVVSSLILMGGNFGMFYDIHAVIVIFGGSFAATLIRFPLSAMLHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F L D L + + + E
Sbjct: 62 GAKFAFTMSNLSARDLVDELANIAEIARKSGPVGLEKVEAD------------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + ++ + D L + +G+ PA G++G
Sbjct: 103 ---DPFLAKGIRYVADGYDIEF-IRDNLERDRDNFLLHLNEGSKIYRAIGDCAPAFGMIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LG+++ N+S P LG + V+L TL G +++ +C P+ ++ + +
Sbjct: 159 TLLGMVQMFSNMSD-PSKLGPFMAVALLATLYGAVVANLICLPIADKLHGKLVDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 218 LIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|34558374|ref|NP_908189.1| motility protein A-flagellar motor component [Wolinella
succinogenes DSM 1740]
gi|34484093|emb|CAE11089.1| MOTILITY PROTEIN A-FLAGELLAR MOTOR COMPONENT [Wolinella
succinogenes]
Length = 254
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 100/272 (36%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++IG+ + ++G MG I ++I G + +++ L+ +K+
Sbjct: 3 LGSVIGMVLIF-ALLGSAMMMGVGIGPYIDIPSVLITIGGSVAALLISFKLEQMKNLFKY 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F ++K L ++ E N
Sbjct: 62 LGVAFKPPKY---DVPALVKKLVDYATQARRDGILSLEQ-----------------TANQ 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + M + G A I L++ +++ L A G++G
Sbjct: 102 EENDFLRKGLSMAVDG-AEPDTIRELLEIDMEQTLGRHKANAGIFDTWAALGGAFGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S P +G A+ V+L T G +L + P+ S + + + +
Sbjct: 161 LIGLVAMLMNMSD-PSTIGPAMAVALITTFYGALLGNVVGAPIASILLIRAGDEALVKQL 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + +++ G P+ LP ++R S
Sbjct: 220 IIEGIMSIQAGDNPRTLEAKLLAFLPPTQRIS 251
>gi|225620338|ref|YP_002721595.1| flagellar motor protein [Brachyspira hyodysenteriae WA1]
gi|225215157|gb|ACN83891.1| Flagellar Motor Protein [Brachyspira hyodysenteriae WA1]
Length = 263
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 105/277 (37%), Gaps = 23/277 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +G+F+ I + G + GGN ++ V+ G ++AN L I +
Sbjct: 3 IIVPLGVFLVIGINLFGIISGGGNVGHMVDIASAVVTGLGGTTSLLVANDLGTILGVPKA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + ++ L ++ E+ I + +
Sbjct: 63 LKMLLNKPDY---DEAQIIITLLSFSEKARREGLLVLEDDIQEISD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ M++++ G ++N+++ EID + PA G++G
Sbjct: 106 ---PLLKKGMQLVVDGT-DPELVKNILNTEIDNVEARHDTVRKVFEDAASLYPAWGMIGT 161
Query: 181 ILGIIKAMGNLSQSP--KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
++G++ + +L + +G+ + V+L T G +++ P+ ++ + + +
Sbjct: 162 LIGLVIMLRSLGGGGGVEAIGSGMAVALITTYYGSVIANGFALPIAGRLAARHSSEATVQ 221
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
I+ + +++ G P++ + LP S+R +
Sbjct: 222 SIMVEGILSIQAGDNPRIVKDKLISFLPPSQRQKVNE 258
>gi|119775567|ref|YP_928307.1| flagellar motor protein PomA [Shewanella amazonensis SB2B]
gi|119768067|gb|ABM00638.1| MotA/TolQ/ExbB proton channel [Shewanella amazonensis SB2B]
Length = 255
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 107/271 (39%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL ++ GG I + + IV G L +M LK +
Sbjct: 3 LATLIGLLGAFAFVVMAMV-TGGGLAIFVDIPSVFIVFGGSLFVVMMKFNLKQFFGAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + ++++ + +KG E
Sbjct: 62 AAKAFMFKIDKPE---ELIEQSVAMADAARKGGFLALEEA-------------------Q 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + ++++I + G+ PA+G++G
Sbjct: 100 ISNSFMQKAVDMLVDGHDGD-VVREALEKDIALTEERHRTGIGIFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +L+ + P+ ++ ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAMLANMVAIPVADKLSLRMSEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + L R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLAEKSRK 248
>gi|78777213|ref|YP_393528.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
gi|78497753|gb|ABB44293.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
Length = 254
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 109/272 (40%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IG+ + + ++G AMG + ++IV G +G +++ +K
Sbjct: 3 LGTVIGIVLIMALLLGAM-AMGVGIGPYVDIPSVLIVIGGSIGALMISFKPSQMKSFVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ Q+ +++K L +K E+ ++D N
Sbjct: 62 FMIAIKPP---QEDKIELIKKLVQFSTKARKDGILALESEVNDEQN-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M I GN I L++ E++ S A+G+VG
Sbjct: 105 ---AFLKKGLSMAIDGN-EPDNIRELLEIEMEQTSTRHKMNGSIFSQWAGLAGAMGMVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N++ P +G ++ V+L T+ G I+ + NP+ + + ++ + +
Sbjct: 161 LIGLVAMLLNMAD-PSAIGPSMAVALLTTMYGAIIGNVVGNPIANILGIRNDEESLVKEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ +++ +G P+ L +ER S
Sbjct: 220 ILTGIMSIQSGDAPRALEAKLLSYLAPNERVS 251
>gi|45658759|ref|YP_002845.1| chemotaxis motility protein A [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602003|gb|AAS71482.1| chemotaxis motility protein A [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 252
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 23/263 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T +GL + L ++ G + + +++ G G + L IKD ++L
Sbjct: 12 TFVGLSVAFLSVLIAILLEGAHFLSFFKISAFLLIVGGTAGATFASFSLGQIKDLVLNLQ 71
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
K + +L +K E+++ +
Sbjct: 72 RSVFPKR-----KLPLGELFLDFAERARKNGLLSLEDNLKSIQD---------------- 110
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ +++I+ G +E ++ E + ++ + G P +GI+G ++
Sbjct: 111 -PFLQRGIQLIVDGT-DPRAVEEILFESAMAMEDKETNSAKILETAGGFSPTVGIIGTVM 168
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G++ + NL K LG I + T GI + L PL ++IKS +Q +
Sbjct: 169 GLVGVLENLGAGTKALGEGIATAFIATFYGIAFANLLFFPLANRIKSWSKEQSDRRQAII 228
Query: 243 KALIAYMNGAIPQVAIEYGRKVL 265
+ +IA +G ++ +E +
Sbjct: 229 RGVIALQSGDNRRILMERMNPFI 251
>gi|83815022|ref|YP_446692.1| chemotaxis motA protein [Salinibacter ruber DSM 13855]
gi|294508628|ref|YP_003572687.1| chemotaxis motA protein [Salinibacter ruber M8]
gi|83756416|gb|ABC44529.1| chemotaxis motA protein [Salinibacter ruber DSM 13855]
gi|294344957|emb|CBH25735.1| Chemotaxis motA protein [Salinibacter ruber M8]
Length = 273
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 52/285 (18%), Positives = 104/285 (36%), Gaps = 30/285 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST IGL + I G G P +++V G V+ +K
Sbjct: 4 STSIGLISGFVLITGAILL-GNTWGKFFDPASLLMVVGGTAAAVVVNYSFDDLKRVIEMT 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
++F ++ D + + ++ + HIDD ++E
Sbjct: 63 QDLFAFEPPSLQRRLD---QITNMARTARREGVLALDRHIDDV--------------DDE 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L F + M + G EI ++D+ I + ++ + G PA G++G +
Sbjct: 106 LLEF---GLEMAVDGMGED-EIAGMLDQRIAEMKGKRQLVADFFTQAGTYAPAFGMIGTL 161
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I+ + NL P +G+ + +L T G +L+ PL + + + + + I
Sbjct: 162 IGLIQMLNNLDD-PSKIGSGMATALVTTFYGALLANLAFLPLGDRARKQNELRGKAHYIT 220
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
++ ++A G P++ + L + V E
Sbjct: 221 REGILAIARGDSPRMIEQRL-GFLAE------DEVEGEAEDAGAE 258
>gi|119503685|ref|ZP_01625768.1| flagellar motor protein PomA [marine gamma proteobacterium
HTCC2080]
gi|119460747|gb|EAW41839.1| flagellar motor protein PomA [marine gamma proteobacterium
HTCC2080]
Length = 255
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 97/252 (38%), Gaps = 24/252 (9%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG I+IV G ++ LK + F K+ ++ +
Sbjct: 20 IFYGGAGPTFYNVPSILIVIGGTFMTVMVKFSLKQFLGAFKVAGRAFSNKSHDPES---L 76
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ + L +K E +F+ D ++M++ G +
Sbjct: 77 IAEIVNLANIGRKEGLLALEKA-------------------AISESFLKDGIQMLVDG-S 116
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++ +M +++ + +G+ PA+G++G ++G++ + N++ PK +
Sbjct: 117 NQEVVKAVMAKDMQQTMDRHNWGERVWRAVGDVAPAMGMIGTLVGLVGMLVNMND-PKAI 175
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G + V+L TL G +L+ + P+ ++ + + ++ + ++A G P+V
Sbjct: 176 GPQMAVALLTTLYGAVLANMVALPIADKLHLRKSNEKLIHQMCIDGVLAIQAGQNPRVIE 235
Query: 259 EYGRKVLPLSER 270
+ L + R
Sbjct: 236 SMLKAYLDPAHR 247
>gi|260773299|ref|ZP_05882215.1| Flagellar motor rotation protein MotA [Vibrio metschnikovii CIP
69.14]
gi|260612438|gb|EEX37641.1| Flagellar motor rotation protein MotA [Vibrio metschnikovii CIP
69.14]
Length = 254
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + ++ +GG+ + + ++IV G ++ + +
Sbjct: 3 LATLVGLIGGLAFVLMAMV-VGGSLVMFVDVTSVLIVVGGSTFVVLVKFTMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA + D++ + + +KG E E
Sbjct: 62 AAKAFMFKAEEPE---DLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + ++I + G+ PA+G++G
Sbjct: 100 ISNSFMQKGIDLLVDGH-DADVVRTALQKDIVLTDERHELGTGVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G I++ + P+ ++ R ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAIMANMIFFPIADKLALRRGQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L +R
Sbjct: 218 IMDGVLAIQDGQNPRVIDGYLKNYLNEGKR 247
>gi|242280307|ref|YP_002992436.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242123201|gb|ACS80897.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 250
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 108/269 (40%), Gaps = 25/269 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ + + ++G + GG + + ++IV G L +A P + + + ++
Sbjct: 4 STLIGMLVGLSLVVGAIFI-GGAVDVFVNVPGMMIVIGGTLASICVAFPFEEVLQAMLAG 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ F + + + +V+ ++ + ++ E N +
Sbjct: 63 FKAFSSRKVKVN---EVVNIMVKVAEISRREGLIALE--------------------NVQ 99
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +I NA I + EI + + PA G++G +
Sbjct: 100 TENVVLRKSCQLIADNADPELIRATLQIEISAMKRRHKIAQDVYKRLAGLAPAFGMLGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ + NL Q P +G A+ V++ T G +L+ L P+ +++++ L++ I+
Sbjct: 160 IGLVQMLSNL-QDPASIGPAMAVAILTTFYGSLLATLLFIPIGAKLRARTLQEQLHLEII 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + + P++ E +R
Sbjct: 219 FEGAKSILENNNPRLVYEKLSSFQAPKDR 247
>gi|296332049|ref|ZP_06874513.1| flagellar motor protein MotP [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675556|ref|YP_003867228.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296150820|gb|EFG91705.1| flagellar motor protein MotP [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305413800|gb|ADM38919.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 280
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 22/229 (9%)
Query: 27 ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILM 86
+ IV G ++ P + +K + L + F +D D++K L
Sbjct: 42 SFLDLTSFFIVTGGLCAAVFISFPPRELKKAPSVLKQAF---IRQEDNVKDLVKTFVSLS 98
Query: 87 YNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENL 146
+ +K ++ + + F+ + + I G I +
Sbjct: 99 DHARKHGLLSLDDQTREIKD-----------------PFLKKGLLLAIDGW-DEETIRLV 140
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++L
Sbjct: 141 MDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLND-PHMLGPNMAIAL 199
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 200 LTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGIQSGKNPR 248
>gi|91793919|ref|YP_563570.1| flagellar motor protein PomA [Shewanella denitrificans OS217]
gi|91715921|gb|ABE55847.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 255
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 109/271 (40%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IG+ I+G GG + I ++IV + +M LK +
Sbjct: 3 LGTLIGIIGAFGFIVGAMATSGG-VGLFIDVASVLIVVAGSVFVVMMKFNLKQFFGAVSI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L+ F +K + ++++ + +KG E
Sbjct: 62 GLKAFMFKIDKPE---ELIEQSVNMADAARKGGFLALEEA-------------------Q 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + ++++I + G+ PA+G++G
Sbjct: 100 ITNSFMQKAVDMLVDGH-DGEVVRAALEKDIALTEERHKTGISIFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G ++ V+L TL G +++ + P+ ++ ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPSMAVALLTTLYGAMIANMVAIPMADKLSLRMAEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ A++A +G P+V + + + +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYISEKKRK 248
>gi|291336866|gb|ADD96398.1| predicted flagellar motor component [uncultured organism
MedDCM-OCT-S09-C206]
Length = 254
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 102/277 (36%), Gaps = 25/277 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++++GL I I+ A GG I I IV G + NPL V S +
Sbjct: 3 IASLVGLVGAIGAILAAMIA-GGGVAPFIDTQSIFIVFGGTFFAVMYGNPLPVFLGSFGA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F D + ++ + L +K E
Sbjct: 62 MAKAFLPPIKKLD---ETVERMVELAGMARKDGMMALEGQ-------------------P 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F M+M++ G ++ M EI + + + PA+G++G
Sbjct: 100 VPDKFFEKGMQMLVDGADEQKLVKQ-MKSEIASMKARHEVNQGVVQGWVDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GN+ PK +G A+ V+L TL G ++ L P+ +++ + I
Sbjct: 159 LIGLVLMLGNMGD-PKSIGPAMAVALLTTLYGAFVANVLFAPIAKKLEYYTSYEVVYREI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
V + L P+ + LP + E+ A
Sbjct: 218 VLEGLRGIARSESPRNIQDQMAAALPPKLQSKFELAA 254
>gi|168334554|ref|ZP_02692710.1| MotA/TolQ/ExbB proton channel [Epulopiscium sp. 'N.t. morphotype
B']
Length = 255
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 51/273 (18%), Positives = 105/273 (38%), Gaps = 24/273 (8%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
+GLF+ I ++ I I IV G + ++ANP+ + + I
Sbjct: 7 LGLFLGIFFMVLAIGFD--KIADFIDIPSIQIVFGGLVAALLLANPMNKLGPGFSAFKLI 64
Query: 65 FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
F + + ++ + L ++ E D +
Sbjct: 65 FKEITVKPEN---LISQINELAQAARREGLLVLEEKARDMED-----------------P 104
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + +++ G I ++++ E+ + H+ E PA G++G ++G+
Sbjct: 105 FMQKGIMLMVDGT-DPELIRDILETELAFMEDRHKDKQGFWEHIAELGPAWGMIGTLIGL 163
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+ + LS P LG ++ V+L TL G +++ + P ++K + ++ +
Sbjct: 164 VNMLAQLSD-PSTLGPSMAVALITTLYGSVIANFVAGPSVKKLKGKTAVEVVARQMMIEG 222
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
L++ G P+V E + L S R S E A
Sbjct: 223 LLSIQAGENPRVIEEKLKSFLAPSLRGSEEDAA 255
>gi|88859187|ref|ZP_01133828.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
gi|88819413|gb|EAR29227.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
Length = 253
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 112/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I I+ GG+ + + ++IV L + + G
Sbjct: 3 LATLIGMLGAIGFIVMAMIL-GGDLGMFVDIPSVLIVFCGSLFVVLSNFTMGQFFGIGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D ++++ L + +KG E
Sbjct: 62 AAKAFMFKIESPD---ELIEKAVELADSARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + + + ++I + +G+ PA+G++G
Sbjct: 100 IPNSFMQKGINMLVDGH-DADVVRETLQKDITLTSTRHDAGSTLFKALGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G L+ + P+ ++++ + ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKAIGPAMAVALLTTLYGAFLANVVAIPIVAKLQLRKEEEELNQNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++ +G P+V + LP S+R
Sbjct: 218 ILDAVLGIQDGQNPKVIEGILKNYLPESKR 247
>gi|218887955|ref|YP_002437276.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758909|gb|ACL09808.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 251
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 101/270 (37%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ GL + + + G GG+ ++ + +IV G L + PL + + +
Sbjct: 3 IATLFGLIVGLAMVFGA-IMGGGSIWLFVDLHAFMIVVGGSLAAICINFPLNQVLQAFRA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + DV+ + + ++ E +
Sbjct: 62 ASKTLMMREFSDA---DVVNSMVRIAELSRREGIMALE--------------------HV 98
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ M+I NA I++ + EI + + +G P++G+ G
Sbjct: 99 HTNDAVLKKACMLIADNAAPELIKDSLLIEISSLCKRHSVAQNVFKRLGLLAPSLGLTGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ NL +PK +G A+ V++ T G +LS + P+ ++ + + I
Sbjct: 159 LIGLVQMFANL-DNPKSIGPAMSVAMICTFYGAMLSNLILTPIAGKLAARTQLEVHRLEI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + + P++ E L ER
Sbjct: 218 IFEGAKCILENNNPRLVYEKLSSFLAPKER 247
>gi|149909330|ref|ZP_01897986.1| flagellar motor protein [Moritella sp. PE36]
gi|149807647|gb|EDM67595.1| flagellar motor protein [Moritella sp. PE36]
Length = 254
Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 108/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL + ++ GG+ I I+IV L +M +
Sbjct: 3 LATLIGLVGSFAFVLMAMVL-GGDISTFIDTQSILIVFVGSLFVVLMHFNFGQFLAASKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F +K + D+++ + +KG E
Sbjct: 62 AVKAFMFKIDKPE---DLIEQAVEMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + + + ++I + H S +GE PA+G++G
Sbjct: 100 VKNQFMQKGIDLLVDGH-DATVVSQTLQKDIKLTTARHKAGIHVFSMIGEVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G + + + P+ ++K ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVFANMIAIPIAGKLKLRSEEEMLNNTL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++ G P+V + L S+R
Sbjct: 218 IMDAILGIQEGRNPRVIESLLKNYLNSSKR 247
>gi|16080025|ref|NP_390851.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. 168]
gi|221310917|ref|ZP_03592764.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. 168]
gi|221324442|ref|ZP_03605736.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. SMY]
gi|732299|sp|P39063|YTXD_BACSU RecName: Full=Uncharacterized protein YtxD
gi|348048|gb|AAA68282.1| putative [Bacillus subtilis]
gi|2293222|gb|AAC00300.1| YtxD [Bacillus subtilis]
gi|2635457|emb|CAB14951.1| putative flagellar motor component [Bacillus subtilis subsp.
subtilis str. 168]
Length = 272
Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 89/229 (38%), Gaps = 22/229 (9%)
Query: 27 ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILM 86
+ IV G ++ P +K + L + F +D D++K L
Sbjct: 34 SFLDLTSFFIVTGGLCAAVFISFPPSELKKAPSVLKQAF---IRQEDNVKDLVKTFVSLS 90
Query: 87 YNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENL 146
+ +K ++ F+ + + I G I +
Sbjct: 91 DHARKHGLLSLDDQ-----------------AREIKDPFLKKGLLLAIDGW-DEETIRLV 132
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++L
Sbjct: 133 MDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLND-PHMLGPNMAIAL 191
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 192 LTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR 240
>gi|300870392|ref|YP_003785263.1| flagellar Motor Protein MotA [Brachyspira pilosicoli 95/1000]
gi|300688091|gb|ADK30762.1| flagellar Motor Protein, MotA [Brachyspira pilosicoli 95/1000]
Length = 263
Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 39/277 (14%), Positives = 100/277 (36%), Gaps = 23/277 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +G + I + G + GGN ++ V+ G +AN + I +
Sbjct: 3 IIVPLGFLLVIGINLFGIISGGGNVGHMVDIASAVVTGLGGTTSLFVANDIGTILGVPKA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + ++ L ++ E+ I
Sbjct: 63 IKVLLNKPNY---DEAQIIITLISFSEKARREGLLVLEDDI-----------------QE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ M++++ G ++N+++ EID + PA G++G
Sbjct: 103 VSDPFLKKGMQLVVDGT-DPELVKNILNTEIDNVEARHDTVRKVFEDAASLYPAWGMIGT 161
Query: 181 ILGIIKAMGNLSQSP--KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
++G++ + +L + +G+ + V+L T G +++ P+ ++ + + +
Sbjct: 162 LIGLVIMLRSLGGGGGVEAIGSGMAVALITTYYGSVIANGFALPIAGRLAARHASEAIVQ 221
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
I+ + +++ G P++ + LP +R +
Sbjct: 222 SIMLEGILSIQAGDNPRIVKDKLVSFLPPPQRQKVNE 258
>gi|242310592|ref|ZP_04809747.1| motility protein a-flagellar motor [Helicobacter pullorum MIT
98-5489]
gi|239522990|gb|EEQ62856.1| motility protein a-flagellar motor [Helicobacter pullorum MIT
98-5489]
Length = 254
Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 104/272 (38%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IG+ ++ + +IG +G I ++I G + ++A L+ +K
Sbjct: 3 LGTVIGMSLSFI-LIGSAMMLGVGIGPYIDIPSVMITIGGSITSLLIAFKLENMKKFFTY 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
F + ++K L ++ E N
Sbjct: 62 FAIAFKPQTF---DVPALIKKLVDYSTQARRDGILSLEQQ-----------------SNQ 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + M I G A I +L++ ++D L A G++G
Sbjct: 102 EENEFLKRGLNMAIDG-AEPDSIRDLLETDMDRTLERHKSNASIFDTWAAYAGAYGMLGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S P +G A+ V+L TL G + + +P+ + + + + ++
Sbjct: 161 LIGLVAMLLNMSD-PGSIGPAMAVALITTLYGSFIGNVVGSPIANILNVRANDEALVKLM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + +++ G P+ LP S+R S
Sbjct: 220 IIEGIMSIQAGDNPRALEAKLLTFLPPSQRVS 251
>gi|116327382|ref|YP_797102.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332003|ref|YP_801721.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120126|gb|ABJ78169.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125692|gb|ABJ76963.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 244
Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats.
Identities = 46/258 (17%), Positives = 99/258 (38%), Gaps = 23/258 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T IGL + L ++ G + + ++++ G G + L+ IKD ++L
Sbjct: 4 TFIGLSVAFLSVLIAISLEGAHFLSFFKISALLLIIGGTAGATFASFSLEQIKDLVLNLQ 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + +L +K E+++ +
Sbjct: 64 TAVFPRRKPP-----LGELFLDFAEQARKNGLLSLEDNLKSIQD---------------- 102
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ +++I+ G +E ++ E + ++ + G P +GI+G ++
Sbjct: 103 -PFLQRGIQLIVDGT-DPRAVEEILFESALAMEDKEANSAKILETAGGFSPTVGIIGTVM 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G++ + NL + LG I + T GI + L PL ++I+S +Q V
Sbjct: 161 GLVGVLENLGAGTRALGEGIATAFIATFYGITFANLLFFPLANRIRSWSKEQSDRRQAVI 220
Query: 243 KALIAYMNGAIPQVAIEY 260
+ +IA +G ++ +E
Sbjct: 221 RGVIALQSGDNRRILMER 238
>gi|321312512|ref|YP_004204799.1| flagellar motor protein MotP [Bacillus subtilis BSn5]
gi|320018786|gb|ADV93772.1| flagellar motor protein MotP [Bacillus subtilis BSn5]
Length = 272
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 27 ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILM 86
+ IV G ++ P + +K + L + F +D D++K L
Sbjct: 34 SFLDLTSFFIVTGGLCAAVFISFPPRELKKAPSVLKQAF---IRQEDNVKDLVKTFVSLS 90
Query: 87 YNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENL 146
+ +K ++ F+ + + I G I +
Sbjct: 91 DHARKHGLLSLDDQ-----------------AREIKDPFLKKGLLLAIDGW-DEETIRLV 132
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++L
Sbjct: 133 MDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLND-PHMLGPNMAIAL 191
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 192 LTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR 240
>gi|218885923|ref|YP_002435244.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756877|gb|ACL07776.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 251
Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 100/271 (36%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T G+ +I MG P ++IV G ++ PL+ + +
Sbjct: 3 IATFFGVLTGFGLVISA-ILMGPEPGKFFDIASVMIVFGGTAASILVTFPLEEVMQAVRG 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ FG K + DV+ + + ++ E N
Sbjct: 62 GCKAFGSKRVQAQ---DVVNTMVRIAEISRREGLIALE--------------------NV 98
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +I NA I + EI + + + PA G++G
Sbjct: 99 QTENALIKKACQLIADNADPGLIRGTVAIEIASMKRRHNVSIGVFNRLAGYSPAYGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + L+ P +G A+ V++ T G +LS L P+ ++K+ +++ ++
Sbjct: 159 LIGLVQMLATLND-PSSIGPAMAVAIITTFYGALLSNLLFLPIAGKLKARSMQEELHLLV 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ + + P++ E LP ER
Sbjct: 218 IFEGAKCILKNNNPRLVYEKLSSFLPPKERK 248
>gi|254473242|ref|ZP_05086640.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
gi|211957963|gb|EEA93165.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
Length = 256
Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 115/279 (41%), Gaps = 28/279 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+ + ++ + GG+ + I+IV G GL ++ PL + +
Sbjct: 3 LATIIGVIAACVTVLIAIFL-GGSFSQFVDLPSILIVVGGGLAATLVRFPLNGLLSAFGM 61
Query: 61 -LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLE 118
F +K + ++++ + L +K EN I++P
Sbjct: 62 GAKLAFTHKKIEPR---ELVENIAHLAETARKEGPLGLENVEIEEPT------------- 105
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ M+ + G + I + M++E D+ L + +G+S PA G++
Sbjct: 106 -------LAKGMQYVADGYDYNL-IRDSMEKERDLYLTRLNEGARVYRALGDSAPAFGMI 157
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+++ + + P +G ++ ++L TL G +++ +C P+ ++ S ++
Sbjct: 158 GTLVGLVQMLATMDD-PSTIGPSMAIALLTTLYGSLIANVVCIPVADKLDSKFEQEELNQ 216
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+V ++ P + E +P R + A
Sbjct: 217 TLVIDGVLQIRESKSPSLIREMLLAYIPEKGRSDMIEAA 255
>gi|87119462|ref|ZP_01075359.1| chemotaxis MotA protein [Marinomonas sp. MED121]
gi|86164938|gb|EAQ66206.1| chemotaxis MotA protein [Marinomonas sp. MED121]
Length = 246
Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats.
Identities = 53/255 (20%), Positives = 101/255 (39%), Gaps = 22/255 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+ GLF+ ++ GG +L +IV LG ++ + + S
Sbjct: 3 LLTLAGLFLAFASVVLSNLLGGGEMILLFNLPSAIIVIFGSLGAALVQSNILEATRSLSL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + + +L+Y L ++ S E+ ++ +S
Sbjct: 63 LRWALFPPVF---EFSNARELIYKLANQARRHSVVSLESELNSLNDS------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F ++M I G A L+ +E+ +++ + +G P +GI+G+
Sbjct: 107 ----FSERALQMAIDG-ADPESFSELLHDEVMRFRDKRMASVDFLESIGGYAPTLGIMGS 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I+AM NL SP+ LG I V+ TL G + + P+ ++ + K+ Y +
Sbjct: 162 VLGLIQAMANL-DSPEALGHGIAVAFVSTLYGQGFANLIIFPIAKKLTNYVDKETLYYQL 220
Query: 241 VKKALIAYMNGAIPQ 255
V + G P
Sbjct: 221 VVDGVYGIATGKNPH 235
>gi|221315244|ref|ZP_03597049.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221320161|ref|ZP_03601455.1| flagellar motor protein MotP [Bacillus subtilis subsp. subtilis
str. JH642]
Length = 273
Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 89/229 (38%), Gaps = 22/229 (9%)
Query: 27 ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILM 86
+ IV G ++ P +K + L + F +D D++K L
Sbjct: 35 SFLDLTSFFIVTGGLCAAVFISFPPSELKKAPSVLKQAF---IRQEDNVKDLVKTFVSLS 91
Query: 87 YNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENL 146
+ +K ++ F+ + + I G I +
Sbjct: 92 DHARKHGLLSLDDQ-----------------AREIKDPFLKKGLLLAIDGW-DEETIRLV 133
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++L
Sbjct: 134 MDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLND-PHMLGPNMAIAL 192
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 193 LTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR 241
>gi|87120690|ref|ZP_01076583.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86163918|gb|EAQ65190.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 251
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + II +GG+ + + P +IV +M PL +G
Sbjct: 3 LATLVGL-VGSFAIIISAIILGGSAGMFLDPASCLIVLIGSTFVVLMQYPLSQFLGAGKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K++ D D + + L +KG E +
Sbjct: 62 AAKAFMFKSVPLDALIDEI---FNLADAARKGGLLSLEGM-------------------D 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G+ S +++ M++++ + +G++ PA+G++G
Sbjct: 100 VSHPFMSKGIQMLVDGHDGS-VVKSQMNKDMKMAFERHDAGAKVFKALGDTGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+ PK +G A+ V+L TL G +L+ + P+ +++++ ++ + +
Sbjct: 159 LIGLVQMLANMDD-PKSIGPAMAVALLTTLYGAMLANMVAIPIQAKLENRANEELKAQQL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ AL+A G P+V + + +R
Sbjct: 218 IIDALLAIQAGQNPRVIDGLLKTYIAEGKR 247
>gi|291485405|dbj|BAI86480.1| flagellar motor protein MotP [Bacillus subtilis subsp. natto
BEST195]
Length = 280
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 89/229 (38%), Gaps = 22/229 (9%)
Query: 27 ILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILM 86
+ IV G ++ P +K + L + F +D D++K L
Sbjct: 42 SFLDLTSFFIVTGGLCAAVFISFPPSELKKAPSVLKQAF---IRQEDNVKDLVKTFVSLS 98
Query: 87 YNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENL 146
+ +K ++ F+ + + I G I +
Sbjct: 99 DHARKHGLLSLDDQ-----------------AREIKDPFLKKGLLLAIDGW-DEETIRLV 140
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSL 206
MD EI + K GE PA G++G ++G++ + NL+ P +LG + ++L
Sbjct: 141 MDSEIAAMEERHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLND-PHMLGPNMAIAL 199
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
TL G +L+ + NP+ ++++ + + ++ + +I +G P+
Sbjct: 200 LTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR 248
>gi|308048594|ref|YP_003912160.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307630784|gb|ADN75086.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 254
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I GG+ I + ++IV L +M +K +
Sbjct: 3 LATLIGLIGAFAFVIMAMV-QGGDVMIFVNIESVLIVLAGSLFVVMMKFNMKQFFGAVKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + +++ + +KG E
Sbjct: 62 ATKAFMFKLDKPE---ELIDQSVTMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + +++ G+ + + + + ++I + +GE PA+G++G
Sbjct: 100 VNNSFMKKAVDLLVDGH-DAEVVRDALAKDIGLTAERHAAGIDIFRKLGEVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +++ + P+ +++ ++ +
Sbjct: 159 LIGLVAMLNNMDD-PKTIGPAMAVALLTTLYGAVIANMVALPIADKLELRMQEEMLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++A +G P+V + + L +R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLNEKKR 247
>gi|167624990|ref|YP_001675284.1| flagellar motor protein PomA [Shewanella halifaxensis HAW-EB4]
gi|167355012|gb|ABZ77625.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 255
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL II + GG I I I+IV L +M LK S
Sbjct: 3 LATLIGLIGAFAFIIMAMASSGG-IGIFINVPSILIVMIGSLFVVMMKYNLKQFLGSAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + D+++ + +KG E
Sbjct: 62 AAKAFIFKLDKPE---DLIEQSISMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + + ++++I + +G+ PA+G++G
Sbjct: 100 ISNSFMQKAVDMLVDGHDGD-VVRDALEKDIALTEERHKTGIGIFKSIGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +++ + P+ ++ ++ +
Sbjct: 159 LIGLVGMLSNMDD-PKSIGPAMAVALLTTLYGAVVANMVALPIADKLSLRMNEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++A +G P+V + + L R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLSEKSR 247
>gi|121997147|ref|YP_001001934.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121588552|gb|ABM61132.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
Length = 288
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 95/248 (38%), Gaps = 24/248 (9%)
Query: 23 GNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLL 82
G+ ++IV G ++ L + +S + F + QD ++
Sbjct: 45 GDAAQFFYLPAVLIVFGGTFSATLIKFSLHQVINSVRVASQAFKRR---QDDPAALITQT 101
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
L ++K E+ F + + + G
Sbjct: 102 KELATLVRKHGFLALEDA-------------------EVHNPFFRKALDLTVDG-VEPEL 141
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
++ ++ EE+++ + MGE PA G++G ++G+++ +GNL + P+ +G +
Sbjct: 142 VQRILREELELSMQRHEVGQRIFRSMGEQAPAFGMIGTLVGLVQMLGNL-EDPEAIGPGM 200
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+L TL G + + + P+ ++ ++H +++ A+ ++ E
Sbjct: 201 AVALLTTLYGALFAQLVALPIADNLEVRAQQEHTNNLLIIDAVTCIHKRYNSRLIDEVLS 260
Query: 263 KVLPLSER 270
LP S+R
Sbjct: 261 NYLPPSQR 268
>gi|307944456|ref|ZP_07659796.1| chemotaxis protein PomA [Roseibium sp. TrichSKD4]
gi|307772205|gb|EFO31426.1| chemotaxis protein PomA [Roseibium sp. TrichSKD4]
Length = 255
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/279 (21%), Positives = 109/279 (39%), Gaps = 28/279 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV- 59
++T+IG+ + GG+ I I+IV G GL ++ L I + +
Sbjct: 3 LATLIGVLGAFGIVATAILL-GGSFSQFIDVPSILIVIGGGLLATLIRFQLNDIATAFIT 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLE 118
+ F KA D++ + L ++K EN I DP + +
Sbjct: 62 AFKCAFTGKAANPR---DLIAEITNLGDIVRKSGPLGLENVDISDP----VLAKGVQYIA 114
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ T FI D M+ E D+ L + + +G+S PA G++
Sbjct: 115 DGYETEFIKDS-----------------MERERDLNLTRLSEGKRVMKALGDSAPAFGMI 157
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+++ + N+ P +G ++ V+L TL G +LS LC PL ++ +
Sbjct: 158 GTLVGLVQMLANMDD-PAAIGPSMAVALLTTLYGALLSNVLCLPLVEKLDAKFDVDELNQ 216
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
++ + ++ P + E LP R A
Sbjct: 217 TLIIEGVLQIRENKSPALIQEMLLAYLPEKARAEFAEAA 255
>gi|91201945|emb|CAJ75005.1| strongly similar to H+-driven flagellar motor component MotA
[Candidatus Kuenenia stuttgartiensis]
Length = 262
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 99/256 (38%), Gaps = 24/256 (9%)
Query: 16 GGFYAMGGNPYIL--IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
GG ++ I I+IV G L ++ P+ + + + K
Sbjct: 18 VSIVMDGGGAAVIAYINIPSIMIVVGGTLAATIVRFPIPTVIGAIAVAKKTVFVK---FG 74
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
+ +K L ++ E ++ + F+ +R++
Sbjct: 75 PIEEEIKRLVEFCKVSRREGLLGLEKEVEKIND-----------------PFLVKSVRLL 117
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ G + S + +++ EID I + G PA G++G +LG++ + NL
Sbjct: 118 VDG-SDSDALRDILGTEIDKIRQRHTSGKGILDFAGMVAPAYGMIGTLLGLVNMLKNLDD 176
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
P +G + V+L TL G+ILS + PL ++++ K+ I+ + +++ G
Sbjct: 177 -PSKIGGGMAVALITTLYGVILSNLIFIPLGGRLETLSSKELLSKEIILEGVVSIQKGDA 235
Query: 254 PQVAIEYGRKVLPLSE 269
P + + + L +
Sbjct: 236 PMITEDKLKAFLQPKD 251
>gi|39935078|ref|NP_947354.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris CGA009]
gi|192290611|ref|YP_001991216.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris TIE-1]
gi|39648929|emb|CAE27450.1| possible chemotaxis protein motA [Rhodopseudomonas palustris
CGA009]
gi|192284360|gb|ACF00741.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris TIE-1]
Length = 257
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 104/277 (37%), Gaps = 26/277 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
+ T GL I +I MGG+ ++ I ++I+ G L ++ PL V+ +
Sbjct: 3 IMTSAGLVGGI-AVIAVMMLMGGDVHMFISEHAMIIIFGGSLTATMIRFPLNVMLHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F L D L + + + E +DP
Sbjct: 62 GAKFAFTMSRLSARDLVDELASIAEIARKSGPVGLEKVEA--EDP--------------- 104
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + ++ + D L + +G+ PA G++G
Sbjct: 105 -----FLAKGIRYVADGYDIEF-IRDNLERDRDNFLMHLDEGSKIYRAIGDCAPAFGMIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ N+S P LG + +L TL G +++ C P+ ++ + ++ +
Sbjct: 159 TLIGMVQMFSNMSD-PSKLGPFMATALLATLYGALVANLFCLPIADKLHTKKIDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
++ ++ + P + E LP R +
Sbjct: 218 LIIDGILMIRDSKSPALVREMLLAYLPEKHRSEEDEA 254
>gi|225849648|ref|YP_002729882.1| chemotaxis protein PomA [Persephonella marina EX-H1]
gi|225646132|gb|ACO04318.1| chemotaxis protein PomA [Persephonella marina EX-H1]
Length = 253
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 108/263 (41%), Gaps = 21/263 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STIIG+ L I+ A+GG+P + I+I G GL + + P+K + +
Sbjct: 3 ISTIIGIVAAFLLIVIS-IAIGGSPLAFVNIPSILITVGGGLSATLTSFPMKDLFSGLKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + G ++ L + +K E++ID+ Y
Sbjct: 62 ITKAM---NPGLPDPMELTDFLVDVANRARKDGILALESNIDEFYGR------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + MRM+I G EI + D + I E +GE PA G++G
Sbjct: 106 --DPFFGEIMRMLIDGQDIE-EIRSNADSSLMKIEQELSTEVAVWETLGELFPAFGMIGT 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NL+ P LG + V++ TL G IL+ + C P++ ++K +
Sbjct: 163 LIGLIQMLQNLND-PSALGPGMAVAMITTLYGAILANAFCVPVSKKLKLYKDLSLLYKES 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRK 263
+ A NG P V
Sbjct: 222 YMFTVEAINNGTNPNVLRSKLMS 244
>gi|115524023|ref|YP_780934.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115517970|gb|ABJ05954.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 257
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 99/271 (36%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
++T++GL ++ MGG+ + ++I+ G ++ P+ + +
Sbjct: 3 IATLLGLIAG-AIVLSTLILMGGDFRMFYDIHAVIIIFGGSFAATLIRFPMSAMIHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F +L D L + + + E
Sbjct: 62 GAKFAFTLSSLSARDLVDELARIAEIARKQGPVGLEKVETD------------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + M+ + D L + +G+ PA G++G
Sbjct: 103 ---EPFLAKGIRYVADGYDLEF-IRDNMERDRDNFLLHLNEGSKIYRAIGDCAPAFGMIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LG+++ N+S P LG + V+L TL G +++ +C P+ ++ + +
Sbjct: 159 TLLGMVQMFSNMSD-PSKLGPFMAVALLATLYGALVANLICLPIADKLHGKLIDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 218 LIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|114320553|ref|YP_742236.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114226947|gb|ABI56746.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
Length = 267
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 102/279 (36%), Gaps = 27/279 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T++GL I I G P + ++IV G L ++ P + +S
Sbjct: 4 TTLLGLVSGITIIFAAIGL-GSAPGEFLYLPALLIVFGGTLASTMIKFPFTHVANSFRVA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETE-NHIDDPYNSTIFTSIPTVLENN 120
F ++ ++ + L + E +++P
Sbjct: 63 GLAF---VRQEEDPRRLILQVKELAKTARMKGLLALEDAEVENP---------------- 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F +++ G + ++ E++++ + +GE+ PA G++G
Sbjct: 104 ----FFRKGLQLCADG-VEPELMHKVLKEDLEMSVERHDVGQRIFRAIGEAAPAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + +L P +G + +L TL G + + + P+ +++ + ++
Sbjct: 159 LVGLVQMLAHLDD-PAAIGPGMATALLTTLYGAMFAQLVALPIADKLELRAQNERANKML 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ + + G ++ E LP R + + +
Sbjct: 218 ILEGINCIRQGFNARMIEELLTAYLPTKTRGELAAMEEA 256
>gi|119714996|ref|YP_921961.1| MotA/TolQ/ExbB proton channel [Nocardioides sp. JS614]
gi|119535657|gb|ABL80274.1| MotA/TolQ/ExbB proton channel [Nocardioides sp. JS614]
Length = 255
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 55/274 (20%), Positives = 111/274 (40%), Gaps = 28/274 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IG+ + + ++ GGNP L+ I++V G L + + K + L
Sbjct: 4 ATLIGVLVAFIVVVVVNMLEGGNPMSLMLLPPILLVFGVTLLISLAGGTMADAKLAMRGL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETE---NHIDDPYNSTIFTSIPTVLE 118
+ F A ++ L ++ E +DDP
Sbjct: 64 VRAFTGHAPNSA---QLVPQLVACADKARREGLLALEDTVAGLDDP-------------- 106
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ + M I G E+ ++++ E+ E + + G P IGIV
Sbjct: 107 ------FLARALTMAIDGT-DPEELRDILEAEVQAKKAETKQAARFWNSAGGYAPTIGIV 159
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ + L++ P+ LG I + TL G++ + + PL S++ +
Sbjct: 160 GTVMGLVHVLEQLAE-PEKLGHLIAGAFVATLWGVMSANLIFLPLGSRLLRLGELEAAQM 218
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+V + + A G+ P++ + R +LP+ +R +
Sbjct: 219 ELVIEGVAAVQAGSNPRIVAQRLRSLLPVGQREA 252
>gi|313681735|ref|YP_004059473.1| mota/tolq/exbb proton channel [Sulfuricurvum kujiense DSM 16994]
gi|313154595|gb|ADR33273.1| MotA/TolQ/ExbB proton channel [Sulfuricurvum kujiense DSM 16994]
Length = 256
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 106/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ ++G+ I I G GGNP ++ ++I+ L +++ + +K + +
Sbjct: 3 LTVVLGILGAIASISIGDLMEGGNPVHVVHITSLIIIMPTTLLAAMVSTDAEHVKGAYKA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF + +K + L ++ E + +
Sbjct: 63 VPIIFKKSQVDLHAR---IKQIIELSTMARRDGLLSLEAKVAQLDS-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M + GN +E M+ I+ + H GE+ P +G+VGA
Sbjct: 106 ---EFLKQGLSMAVDGNEVDTIVET-MELVIEETEHYYHGCAHYWIIAGETSPVLGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I A+ L +P + I + T T+ GI +Y L P+ +++ + +
Sbjct: 162 VLGLILALQKL-DNPAEMAAGIAGAFTATVTGIFSAYVLFGPMGNKLAKKAHHIVKEQKL 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + +I ++G P+ L +E
Sbjct: 221 MLEGIIGIVHGDNPRTLEAKLLNFLSPAE 249
>gi|2772919|gb|AAB96641.1| MotA [Salmonella enterica subsp. enterica serovar Typhimurium]
Length = 137
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 75/137 (54%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K IK + +
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ +F + Y D+L LLY LM ++ E I++P S IF S P +L +
Sbjct: 61 IPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADA 120
Query: 121 ELTTFICDYMRMIIVGN 137
+ FI DY+R+II GN
Sbjct: 121 VMLDFIVDYLRLIISGN 137
>gi|224373186|ref|YP_002607558.1| motility protein A-flagellar motor component [Nautilia profundicola
AmH]
gi|223589577|gb|ACM93313.1| motility protein A-flagellar motor component [Nautilia profundicola
AmH]
Length = 255
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 105/272 (38%), Gaps = 22/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++IGL + II AMG I ++IV L ++N ++++
Sbjct: 3 LASVIGLVGALGLIIAAM-AMGVGVGPYIDGQSVLIVVLGSLMTLFISNKMEMMTKFAKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ Q Y +++K L ++ E +
Sbjct: 62 FMIAIKPS--YQPNYEELIKKLVDYATQARRDGILSLEQAAAN----------------- 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + M + GN I L++ +++ + K + A+G++G
Sbjct: 103 EEDEFLKKGLSMAVDGN-EPDTIRELLEIDLEQMDARHKKMAAIFDNWAGLAGAMGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S P +G A+ V+L TL G ++ P+ +++ + +
Sbjct: 162 LVGLVAMLLNMSD-PSAIGPAMAVALLTTLYGAMIGNIFGTPVANKLALRNDDEILAKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + +++ G P+ LP ++R S
Sbjct: 221 IIEGIMSIQAGDNPRTLEAKLLSFLPPAQRKS 252
>gi|68164501|gb|AAY87230.1| predicted flagellar motor component [uncultured bacterium BAC17H8]
Length = 253
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 104/276 (37%), Gaps = 25/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++IGL I I+G GG I I+IV G + PL V S
Sbjct: 3 IASLIGLLGAIGMILGAMI-SGGGIGPFIDVPSILIVFGGTFFAVMYTAPLPVFLGSFGV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F D +++ + L +K E
Sbjct: 62 MAKGFLPPVKKMDG---MIERMVDLAGIARKDGMMALEGQ-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F ++M++ G + ++ + +EI + I + PA+G++G
Sbjct: 100 VPDAFFEKGLQMLVDGADEA-KLTAQLKQEIKSMKSRHEANQGVIKAWVDLAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GN++ PK +G A+ V+L TL G ++ L PL ++++ + +
Sbjct: 159 LIGLVLMLGNMAD-PKAIGPAMAVALLTTLYGAFIANILFAPLVTKLEGYTAYETVYREM 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
V + L G P+ + LP + +
Sbjct: 218 VVEGLRNIARGESPRNIQDQLLSNLPPKLQEKLAAA 253
>gi|149201620|ref|ZP_01878594.1| Flagellar motor protein MotA [Roseovarius sp. TM1035]
gi|149144668|gb|EDM32697.1| Flagellar motor protein MotA [Roseovarius sp. TM1035]
Length = 253
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 110/268 (41%), Gaps = 25/268 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++++IGL + ++G A GG I I+IV G + + + S +
Sbjct: 3 IASLIGLIGALGMVVGSMLAAGG-LGPFIDVASILIVFGGTFFAVMYKCTMPIFLRSFGA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F KA ++ +++ + L +K EN
Sbjct: 62 VGKAFMPKAPSKE---ELITKMVELSDVARKNGLMALENQ-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F ++M++ G S ++ + +EI + + + A+ + PA+G++G
Sbjct: 100 VPDKFFSKGLQMLVDGADESKLVKQ-LSDEIKAMKVRHGEVHEALRGWIDIAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ +GN++ PK +G A+ V+L TL G ++ + P+ S+++ + +
Sbjct: 159 LIGLVQMLGNMAD-PKAIGPAMAVALLTTLYGAFIANVMVGPVLSKLEGYTASETAYRDM 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLS 268
V L G + E VLP
Sbjct: 218 VLAGLRNIAKGESGRNVQEQMVAVLPPK 245
>gi|224418308|ref|ZP_03656314.1| motility protein A-flagellar motor component [Helicobacter
canadensis MIT 98-5491]
gi|253827630|ref|ZP_04870515.1| flagellar motor component MotA [Helicobacter canadensis MIT
98-5491]
gi|313141839|ref|ZP_07804032.1| motility protein a-flagellar motor [Helicobacter canadensis MIT
98-5491]
gi|253511036|gb|EES89695.1| flagellar motor component MotA [Helicobacter canadensis MIT
98-5491]
gi|313130870|gb|EFR48487.1| motility protein a-flagellar motor [Helicobacter canadensis MIT
98-5491]
Length = 254
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 104/272 (38%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ ++ + +IG +G I +I G + + ++ +K
Sbjct: 3 LATVIGMSLSFI-LIGTAMMLGVGIGPYIDIPSALITIGGSITSLFIGYKMENVKKIFTY 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + ++K L ++ E N
Sbjct: 62 FLVAFKPQTF---DVLGLVKKLVDYSTQARRDGILSLEQQ-----------------SNQ 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + M I G A I +L++ ++D L A G++G
Sbjct: 102 EENDFLKRGLNMAIDG-AEPDSIRSLLEMDLDRTLERHKANAGIFDTWAAYAGAYGMLGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S P +G A+ V+L TL G ++ + +P+ + + + + ++
Sbjct: 161 LIGLVAMLLNMSD-PSSIGPAMAVALITTLYGSMVGNIVGSPIANILNIRANDEALVKLM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + +++ G P+ LP ++R S
Sbjct: 220 IIEGIMSIQAGDNPRALEAKLLTFLPPNQRVS 251
>gi|315654588|ref|ZP_07907494.1| chemotaxis MotA protein [Mobiluncus curtisii ATCC 51333]
gi|315491052|gb|EFU80671.1| chemotaxis MotA protein [Mobiluncus curtisii ATCC 51333]
Length = 259
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 98/251 (39%), Gaps = 22/251 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
Y G ++ P +++V G + + + ++ + + + F K D
Sbjct: 21 YMEGAEISNILLPPPMILVFGGTILATMASFTMRDFLYAFGRIPKAFTAKVPDATDAIDT 80
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ L ++ E+ + F+ + + M +
Sbjct: 81 IVSLSE---KARREGLLALEDAAKGIED-----------------QFMREGL-MAAIDGM 119
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++ +++ ++I+ Y G P IGI+G ++ ++ + LS+ P+ L
Sbjct: 120 DPEDLRSMLSDKIEARKQSDKSAYGFFKQAGGYAPTIGIIGTVISLVHVLTQLSE-PETL 178
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I + TL G++ + + PL+S+++ + IV + LI+ +GA P+
Sbjct: 179 GPLIASAFVATLWGLMSANMIWLPLSSRMERISTLELARMEIVTEGLISLQSGANPRQVG 238
Query: 259 EYGRKVLPLSE 269
E R ++P ++
Sbjct: 239 ERLRSLIPPNQ 249
>gi|227873542|ref|ZP_03991787.1| flagellar motor protein A [Oribacterium sinus F0268]
gi|227840632|gb|EEJ51017.1| flagellar motor protein A [Oribacterium sinus F0268]
Length = 275
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 97/276 (35%), Gaps = 29/276 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S ++G I I II G +IV G + + P ++IK+
Sbjct: 3 ISMLLGWIIAIALIISGITMP--KLGNFWDAPSALIVVGGTIAALIACYPFRIIKEIPKH 60
Query: 61 LLEIF-GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+ F G K D L L ++ E ++
Sbjct: 61 IGICFRGGKKYNVPQTVDA---LVDLALIARQSGLLALEEKAEEIKE------------- 104
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F + MI+ N ++ ++ +++ ++ + PA G++G
Sbjct: 105 ----PFFKQAVVMIVDAN-DPDKVRASLEHQVEDMMTRHEEAKGLYVKGSALAPAFGMIG 159
Query: 180 AILGIIKAMGNLS-----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
++G++ + + LG +GV+L T G +S L +P+ ++ ++
Sbjct: 160 TLVGLVNMLKGMDLSGSGGGASTLGQDMGVALITTFYGSAMSNVLFHPIAQKLTIKDNEE 219
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ + +IA +G P+V E L ++
Sbjct: 220 VLYCSIIIEGVIAIQSGDNPKVIRERLLASLAQKQQ 255
>gi|170741246|ref|YP_001769901.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
gi|168195520|gb|ACA17467.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
Length = 257
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 109/282 (38%), Gaps = 30/282 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
++T +GL +I GG+ + ++++ G ++ P VI +
Sbjct: 3 LATGLGLIGGFAVVIVLILVDGGHFASYVDKHALIVIFGGATAATMLRFPFSVIVHGVPM 62
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLE 118
L F +A+ D+++ + + ++K EN I DP
Sbjct: 63 GLRYAFSMRAVRPR---DLIEEITRIAEVVRKSGPMALENMEISDP-------------- 105
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ +R I G R + I + M+ + D L + G+ PA G++
Sbjct: 106 ------FLAQGVRYIADGYDRDF-IRDTMERDRDNFLMHLEEGSKVYRAFGDCAPAWGMI 158
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ILG++ N+S P LG A+ +L TL G +++ + P+ ++ ++
Sbjct: 159 GTILGMVSMFANMSD-PSKLGPAMATALLATLYGALIANMITLPIADKLHVKLEEEDVSR 217
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
++ ++ + + E LP + R E +A E
Sbjct: 218 SLIIDGVLLIRDAKSASLVREMLIAYLPHNHR---EELAAEA 256
>gi|239906260|ref|YP_002953000.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239796125|dbj|BAH75114.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 267
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 112/277 (40%), Gaps = 21/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ + + Y + + + + IV G L + PLK + +
Sbjct: 3 IATVIGIVFGVAILGFATYLSTDSAGVFVNFPGLAIVLGGTLASTFICFPLKEVMRVSST 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + L D Y + + + + E + N
Sbjct: 63 FLTALKREELPTDHYIEAI---VSIAREASSRGKIHLEQALPGIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + ++M++ G +R EI+ ++D I+ ++L M + PA GI+G
Sbjct: 106 ---EFLQNAVQMLVDGYSRE-EIKEILDTRIEQTYQQELSSAGIYRTMAKLAPAYGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M ++S LG + V+LT TL GI+LS + P+ +++ ++ L +
Sbjct: 162 LIGLIGMMQSMSVGLGNLGAHMAVALTTTLYGILLSNLIFLPIAIKVEKRIEERVILMCV 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
++ + + + ++ + LP SI+
Sbjct: 222 IRDGTLFIKDKTPAAIVLDKLKAYLPPRRWASIDRAE 258
>gi|254973921|ref|ZP_05270393.1| chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091308|ref|ZP_05320786.1| chemotaxis protein [Clostridium difficile CIP 107932]
gi|255312965|ref|ZP_05354548.1| chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255515724|ref|ZP_05383400.1| chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255648818|ref|ZP_05395720.1| chemotaxis protein [Clostridium difficile QCD-37x79]
gi|260682037|ref|YP_003213322.1| chemotaxis protein [Clostridium difficile CD196]
gi|260685635|ref|YP_003216768.1| chemotaxis protein [Clostridium difficile R20291]
gi|306518933|ref|ZP_07405280.1| chemotaxis protein [Clostridium difficile QCD-32g58]
gi|260208200|emb|CBA60546.1| chemotaxis protein [Clostridium difficile CD196]
gi|260211651|emb|CBE01910.1| chemotaxis protein [Clostridium difficile R20291]
Length = 272
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 52/287 (18%), Positives = 109/287 (37%), Gaps = 25/287 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
T IGL ++ + ++ G G + I+I G ++ + IK
Sbjct: 7 LTFIGLILSTVLVLFGAV-KGSSSGLKSFFDFASILITVFGSFGALMITFTIDDIKLIKD 65
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+L F + + D+L L ++ E+ + +
Sbjct: 66 ALQYSFKTMNISK---LDLLNQFKTLSKKARREGLLSIESDVMKIQD------------- 109
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + + I G EI ++++ EID + + G PA G++G
Sbjct: 110 ----PFMKKGLELCIDG-LEVNEIRSILELEIDSVEETNNRYSKLFKTWGTFAPAFGMLG 164
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+I+ + +L+ SP ++ + +G +L T G +L+ NP+ I K+ +
Sbjct: 165 TLIGLIQMLSDLT-SPDLIASGMGKALITTFYGSLLANIALNPIAYNIDEKTEKEIYVKE 223
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
++ + +I+ +G V E L +E+ I + + N
Sbjct: 224 MMLEGIISIQSGESSIVVEERLATYLSNNEKLEIMKSNKNTERAMSN 270
>gi|330872238|gb|EGH06387.1| flagellar motor protein MotA [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 161
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG+ + I ++GG+ G L QP+E++I+ GA LG F+ ANP +
Sbjct: 1 MAKIIGIIVVIASVLGGYVLSHGKIMALFQPYEVLIIGGAALGAFLQANPGYMTMHVFKK 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++F Y +VL L+Y ++ ++ E I+D +S IF P VL++
Sbjct: 61 SLKMF-GSRFTHAYYLEVLGLVYEILNKSRREGMMAIEGDIEDAASSPIFAKYPGVLKDE 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY 162
+T +ICDY+R++ GN +E+E L D E+ + E P
Sbjct: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELLSMKEELEHPS 161
>gi|242277508|ref|YP_002989637.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242120402|gb|ACS78098.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 258
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 110/275 (40%), Gaps = 21/275 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIG+F I ++ Y + + I I IV G + + PL+ +
Sbjct: 3 IATIIGIFCGIAILMVATYTSTDSVGVFINIPGIAIVGGGTIASTFICYPLREVMRVLGV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ G L + Y +V+ L ++ E + + N
Sbjct: 63 FMMAMGADELPLENYINVI---VGLSKDVSSKGEEHLEGSLKNIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + ++M++ G ++ EI+ ++D I ++ M PA GI+G
Sbjct: 106 ---DFLREGLQMLVDGYSKE-EIKEILDNRIQQYHEQEYSAAGIYRTMSTLSPAFGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M + +G A+ +LT TL G + + L P+ +++ + L +
Sbjct: 162 LIGLIAMMQGMGSDIAAIGPAMATALTTTLYGALFANMLFMPIAIKVEKRIDEITLLMRV 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++ ++ + + ++ + LP + +++
Sbjct: 222 IRDGILFIKDKTPSAIVMDKLKGYLPPRKWATVKA 256
>gi|298346000|ref|YP_003718687.1| flagellar motor protein A [Mobiluncus curtisii ATCC 43063]
gi|304390242|ref|ZP_07372196.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315657507|ref|ZP_07910389.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298236061|gb|ADI67193.1| flagellar motor protein A [Mobiluncus curtisii ATCC 43063]
gi|304326724|gb|EFL93968.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315491979|gb|EFU81588.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 259
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 98/251 (39%), Gaps = 22/251 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
Y G ++ P +++V G + + + ++ + + + F K D
Sbjct: 21 YMEGAEISNILLPPPMILVFGGTVLATMASFTMRDFLYAFGRIPKAFTAKVPDATDAIDT 80
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ L ++ E+ + F+ + + M +
Sbjct: 81 IVSLSE---KARREGLLALEDAAKGIED-----------------QFMREGL-MAAIDGM 119
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
++ +++ ++I+ Y G P IGI+G ++ ++ + LS+ P+ L
Sbjct: 120 DPEDLRSMLSDKIEARKQSDKSAYGFFKQAGGYAPTIGIIGTVISLVHVLTQLSE-PETL 178
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I + TL G++ + + PL+S+++ + IV + LI+ +GA P+
Sbjct: 179 GPLIASAFVATLWGLMSANMIWLPLSSRMERISTLELARMEIVTEGLISLQSGANPRQVG 238
Query: 259 EYGRKVLPLSE 269
E R ++P ++
Sbjct: 239 ERLRSLIPPNQ 249
>gi|315586520|gb|ADU40901.1| flagellar motor protein MotA [Helicobacter pylori 35A]
Length = 247
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 47/261 (18%), Positives = 99/261 (37%), Gaps = 22/261 (8%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ I I G GNP +I ++I+ L + + +K + + +F
Sbjct: 1 MAIASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKEIKIVFLNP 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ + + +K L L +K E + + F +
Sbjct: 61 KINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-----------------DFTRN 100
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ MII G ++ ++ I+ + H GE+ P +G+VGA++G++ A+
Sbjct: 101 GLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLAL 159
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
L +P + I + T T+ GI+ SY++ P ++K+ + ++ + ++
Sbjct: 160 QKL-DNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGI 218
Query: 249 MNGAIPQVAIEYGRKVLPLSE 269
NG P+ + E
Sbjct: 219 ANGENPRDLENKLLNYIAPGE 239
>gi|237752334|ref|ZP_04582814.1| motility protein a-flagellar motor component [Helicobacter
winghamensis ATCC BAA-430]
gi|229375823|gb|EEO25914.1| motility protein a-flagellar motor component [Helicobacter
winghamensis ATCC BAA-430]
Length = 254
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 103/272 (37%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ ++ + ++G +G I+I G + ++ ++ +K +
Sbjct: 3 LGTVVGMSLSFI-LLGTAMMLGVGIGPYFDIPSILITVGGSITSLLIGYKMESMKKAFTF 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F + ++K L ++ E N
Sbjct: 62 FMIAFKPQTF---DVPALIKKLVDYSTQARRDGILSLEQQ-----------------SNQ 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + M I G A I +L++ ++D L A G++G
Sbjct: 102 EENEFLKRGLNMAIDG-AEPDSIRDLLETDMDRTLDRHKSNAGIFDTWAAYAGAYGMLGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S P +G A+ V+L T G + + +P+ + + + + ++
Sbjct: 161 LIGLVAMLLNMSD-PASIGPAMAVALLTTFYGSFIGNVVGSPIANILMIRANDEALVKLL 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + +++ G P+ LP ++R S
Sbjct: 220 IIEGIMSIQAGDNPRALEAKLLTFLPPNQRVS 251
>gi|90423603|ref|YP_531973.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90105617|gb|ABD87654.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 257
Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 99/271 (36%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
++T++GL ++ MGG+ + ++I+ G ++ PL + +
Sbjct: 3 IATLLGLVAG-GIVLTTLILMGGDFRMFYDIHAVIIIFGGSFAATLIRFPLSTMMHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F +L + L + + + E
Sbjct: 62 GAKFAFTLSSLSARDLVEELARIAEIARKSGPVGLEKVETD------------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + M+ + D L + +G+ PA G++G
Sbjct: 103 ---EPFLAKGIRYVADGYDLEF-IRDNMERDRDNFLLHLNEGSKIYRAIGDCAPAFGMIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+LG+++ N+S P LG + V+L TL G +++ +C P+ ++ + +
Sbjct: 159 TLLGMVQMFSNMSD-PSKLGPFMAVALLATLYGALVANLICLPIADKLHGKLIDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 218 LIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|23099680|ref|NP_693146.1| flagellar motor protein MotP [Oceanobacillus iheyensis HTE831]
gi|22777910|dbj|BAC14181.1| flagellar motor aparatus [Oceanobacillus iheyensis HTE831]
Length = 275
Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 106/271 (39%), Gaps = 24/271 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
+ T +G+ + I+ + G+ I IV G ++ ++ I+ +
Sbjct: 6 LLTPLGITLGFTMIMVAIMSNSGSEGISSFADISSIFIVIGGLTASMLITFKMEQIRLTK 65
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L E F Q + +++L L ++ EN +D+ +
Sbjct: 66 RVLKEAFHKS---QRSIPQLIQLFIHLSDRARREGILALENELDEVED------------ 110
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
FI M M+ V I +++ EI + K I E PA G++
Sbjct: 111 -----PFIRKGM-MLAVDGVEPEVITDILTAEITAMEDRHYKGRQLIEKAAEYAPAWGMI 164
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G++ + L++ P LG ++ V+L TL G +L+ P+ +++S ++ +
Sbjct: 165 GTLIGLVLMLNKLAE-PASLGPSMAVALLTTLYGTVLANLFFTPMAGKLESKTEEEVFIR 223
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
I+ + +I +G ++ E L +
Sbjct: 224 QIIIEGIIGVQSGQNSRILEEKLSAFLTEED 254
>gi|307637505|gb|ADN79955.1| Flagellar motor rotation protein [Helicobacter pylori 908]
gi|325996094|gb|ADZ51499.1| Flagellar motor rotation protein [Helicobacter pylori 2018]
Length = 247
Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 99/261 (37%), Gaps = 22/261 (8%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ + I G GNP +I ++I+ L + + +K + + +F
Sbjct: 1 MAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKEIKIVFLNP 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ + + +K L L +K E + + F +
Sbjct: 61 KINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-----------------DFTRN 100
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ MII G ++ ++ I+ + H GE+ P +G+VGA++G++ A+
Sbjct: 101 GLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLAL 159
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
L +P + I + T T+ GI+ SY++ P ++K+ + ++ + ++
Sbjct: 160 QKL-DNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGI 218
Query: 249 MNGAIPQVAIEYGRKVLPLSE 269
NG P+ + E
Sbjct: 219 ANGENPRDLENKLLNYIAPGE 239
>gi|284989546|ref|YP_003408100.1| MotA/TolQ/ExbB proton channel [Geodermatophilus obscurus DSM 43160]
gi|284062791|gb|ADB73729.1| MotA/TolQ/ExbB proton channel [Geodermatophilus obscurus DSM 43160]
Length = 256
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 105/268 (39%), Gaps = 21/268 (7%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IG ++++ ++ G +P L+ I++V A G + + + +K
Sbjct: 4 ATLIGFVVSLVALLIFMVMEGADPTSLLFLPAIILVIVATFGAAMSSQTMDDLKKMPAWF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ T + ++ L L +K E + +
Sbjct: 64 KMAVMPAKVPPAT--EQIQTLVTLAERARKEGLLALEAQVKAIED--------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M I G E+ +++ EI E ++ MG P IGIVG I
Sbjct: 107 --PFLKRGLQMGIDGT-DPEELRAVLESEISAKKAEDKVAAKFMNAMGGYAPTIGIVGCI 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ MGNLS +P+ LG I + TL G++ + P+ ++I Q ++
Sbjct: 164 VGLMNVMGNLS-NPEALGPMIAAAFVATLWGVMAANFWFLPMGAKILRVSELQAAQMELL 222
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ + G P+ ++P SE
Sbjct: 223 VEGITEIQAGTSPRAVRLKLTSLIPPSE 250
>gi|255322337|ref|ZP_05363483.1| chemotaxis protein PomA [Campylobacter showae RM3277]
gi|255300710|gb|EET79981.1| chemotaxis protein PomA [Campylobacter showae RM3277]
Length = 243
Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats.
Identities = 43/259 (16%), Positives = 97/259 (37%), Gaps = 22/259 (8%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
++ G MG I ++IV G + ++ ++ IK G K
Sbjct: 3 LLLGSMQMGVGIGAYIDIPSVLIVFGGTICALMIGFKMEQIKKLGTFYGIAVKPKTYN-- 60
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
+++K + ++ E+ NNE F+ + M
Sbjct: 61 -LPEIVKKMVEYSTKARRDGILALESD-----------------ANNETDPFLKKGLSMA 102
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ GN I L++ +++ + ++G++G ++G++ + N+S
Sbjct: 103 VDGN-EPDAIRTLLEIDMEQASSRHGDNIKIFEQIAGFAGSMGMIGTLIGLVAMLMNMSD 161
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
P +G ++ V+L TL G ++ L +P+ + + + +++ + ++A G
Sbjct: 162 -PSAIGPSMAVALITTLYGAMIGNILGSPVANILSIRDKDEGTAKVLMLEGIMAIQAGDN 220
Query: 254 PQVAIEYGRKVLPLSERPS 272
P+ LP +R S
Sbjct: 221 PRTLEMKLLSFLPPKDRVS 239
>gi|223040123|ref|ZP_03610403.1| chemotaxis protein PomA [Campylobacter rectus RM3267]
gi|222878600|gb|EEF13701.1| chemotaxis protein PomA [Campylobacter rectus RM3267]
Length = 236
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 44/254 (17%), Positives = 94/254 (37%), Gaps = 22/254 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
MG I ++IV G + ++ ++ IK G K ++
Sbjct: 1 MQMGVGVGAYIDIPSVLIVFGGTICALMIGFKMEQIKKLGTFYGIAAKPKTYN---LPEI 57
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+K + ++ EN NNE F+ + M + GN
Sbjct: 58 VKKMVEYSTKARRDGILALEND-----------------ANNETDPFLKKGLSMAVDGN- 99
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
I L++ +++ + ++G++G ++G++ + N+S P +
Sbjct: 100 EPDAIRTLLEIDMEQSSSRHNDNIKIFDQISGFAGSMGMIGTLIGLVAMLMNMSD-PSAI 158
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G ++ V+L TL G ++ L P+ + + ++ +++ + ++A G P+
Sbjct: 159 GPSMAVALITTLYGAMIGNILGAPVANILGIRDKDENTAKVLMLEGIMAIQAGDNPRTLE 218
Query: 259 EYGRKVLPLSERPS 272
LP ER S
Sbjct: 219 MKLLSFLPPKERVS 232
>gi|288942519|ref|YP_003444759.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288897891|gb|ADC63727.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 252
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 107/272 (39%), Gaps = 25/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + +IG GG+ + + IVIV + S
Sbjct: 3 LATLLGLVGAMGVMIGAIVL-GGDVMVFVDIPSIVIVFVGTAFVVLFRTTFGQFLGSFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F K+ +++ L ++ E
Sbjct: 62 ALGAFLNKSTAPTA---LIEEAVALANIARREGLLALEG--------------------K 98
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+++ + + ++ ++ ++I++ + + Y E PA+G++G
Sbjct: 99 QISHPFLQTGISLCIDGHPPEVVQKVLSKDINLAIQRQEAGYSVFKATAEVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + N+S PK +G A+ V+L TL G +L+ ++ P+ ++K ++ +
Sbjct: 159 LIGLVQMLANMSD-PKAIGPAMAVALLTTLYGAVLANAVATPIAEKLKLRSGEEKLAKTL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ +++ G P+V + LP +R S
Sbjct: 218 ILESISGIQEGLNPRVLEQLLMTYLPEHQRQS 249
>gi|121612656|ref|YP_001000047.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926432|ref|ZP_01810115.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8486]
gi|167005003|ref|ZP_02270761.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
81-176]
gi|87250461|gb|EAQ73419.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|145844595|gb|EDK21701.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8486]
Length = 258
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 109/269 (40%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + L ++ E+ ++ N
Sbjct: 63 LKVVFKGSGVN---LPERIAQLIEFAIIARRDGLLALESRTNEIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M M++ G + EI M+ + + + + GE+ P +G+VGA
Sbjct: 106 ---EFLKNAMMMLVDGKSFE-EIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ + + I+
Sbjct: 162 VFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLVKEQIV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A+ GA P+ L +
Sbjct: 221 ITEAIKGIAEGANPRDLEAKLFNFLSHDD 249
>gi|307721193|ref|YP_003892333.1| MotA/TolQ/ExbB proton channel [Sulfurimonas autotrophica DSM 16294]
gi|306979286|gb|ADN09321.1| MotA/TolQ/ExbB proton channel [Sulfurimonas autotrophica DSM 16294]
Length = 254
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 108/272 (39%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IG+ + + ++G G I ++IV G +G +++ +K
Sbjct: 3 LGTVIGIVLIMALLLGAMTM-GVGVGAYIDIPSVLIVVGGSIGALMISFKPAQMKKFTKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ G++ +++K L +K NN
Sbjct: 62 FMKAIK---PGEEDIGELIKKLVEFATKARKDGILAL-----------------ESEVNN 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + M I G + I +L++ +++ + A+G++G
Sbjct: 102 EENEFLKKGLSMAIDG-SEPDTIRDLLEIDMEQTSTRHKVYASIFNQWAGLAGAMGMIGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N++ P +G ++ V+L T+ G ++ P+++ + ++ L +
Sbjct: 161 LVGLVAMLLNMAD-PSAIGPSMAVALLTTMYGAMIGNIFGTPISNILSIRNDEETMLKQM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + +++ +G P+V L ++R S
Sbjct: 220 ILEGIMSIQSGDAPRVLEAKLLAYLAPADRVS 251
>gi|57505392|ref|ZP_00371320.1| probable flagellar motor proton channel Cj0337c [Campylobacter
upsaliensis RM3195]
gi|57016217|gb|EAL53003.1| probable flagellar motor proton channel Cj0337c [Campylobacter
upsaliensis RM3195]
Length = 258
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 109/269 (40%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + + K++K +
Sbjct: 3 LSTILGIVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + L ++ E+ ++ N
Sbjct: 63 LKVVFKGSGVN---LPERIAQLIEFAIVARRDGLLALESKTNEIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M M++ G + EI M+ + + + + GE+ P +G+VGA
Sbjct: 106 ---EFLKNAMMMLVDGKSFE-EIHESMEIQTEQLEEHYKECAEYWIIFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ + + ++
Sbjct: 162 VFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDFVKEQVV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A+ GA P+ L +
Sbjct: 221 ITEAIKGIAEGANPRDLEAKLFNFLSHDD 249
>gi|87121844|ref|ZP_01077730.1| chemotaxis protein MotA [Marinomonas sp. MED121]
gi|86162873|gb|EAQ64152.1| chemotaxis protein MotA [Marinomonas sp. MED121]
Length = 265
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 97/270 (35%), Gaps = 24/270 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+++IG+ II + I + I+IV G L ++ I+D+ +
Sbjct: 4 TSLIGIISGFGLIIYAIMLGSSDFTIFLNVPGIMIVIGGTLAATLVTF---QIRDTLAAF 60
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F A + ++ + + ++
Sbjct: 61 KAGFIIFAQDKQNPQVMIATMLQITKLARREGLIAL-------------------SRVEA 101
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ F+ + M N Y I + +ID + MG PA G++G +
Sbjct: 102 DSPFLKRALNMAADANDEDY-IRKTLQADIDSLKMRHYVVQDVFKKMGSYAPAFGMLGTL 160
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I+ + L P+ +G A+ V+L T G +++ + P+ ++K+ + + + I+
Sbjct: 161 VGLIQMLSKLDD-PEAIGPAMAVALLTTFYGSLMATVIFLPIAGKLKARTILEIQTLEII 219
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ ++ M E +P +R
Sbjct: 220 RDGTVSLMGSNNYLAVYERLSSYIPAKQRK 249
>gi|255305282|ref|ZP_05349454.1| chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 272
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 54/287 (18%), Positives = 113/287 (39%), Gaps = 25/287 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
T IGL ++ + ++ G A G + I+I G ++ + IK
Sbjct: 7 LTFIGLIVSTVLVLVG-AAKGSSSGLKNFFDVSSILITVLGSFGALMITFTIDDIKLIKN 65
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+L F ++ + D+L+ L +K E+ + + +
Sbjct: 66 ALQYSFKTMSVSK---LDLLEQFKTLSKKARKEGLLSIESDVMEIED------------- 109
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + + I G EI ++++ EID + + G PA G++G
Sbjct: 110 ----PFMKKGLELCIDG-LEINEIRSILELEIDSVEDTNNRYSKLFKTWGTFAPAFGMLG 164
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+I+ + +L+ SP ++ + +G +L T G +L+ NP+ I K+ +
Sbjct: 165 TLIGLIQMLADLT-SPDLIASGMGKALITTFYGSLLANIALNPIAYNIDEKTEKEIYVKE 223
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
++ + +I+ +G V E L +E+ I + + N
Sbjct: 224 MMLEGIISIQSGESSIVVEERLATYLSNNEKLEIIKSNKNTERAMSN 270
>gi|90415362|ref|ZP_01223296.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
gi|90332685|gb|EAS47855.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
Length = 250
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 111/277 (40%), Gaps = 30/277 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL I + I ++IV G + + + L +
Sbjct: 3 LATIIGLLGAFGLIFMAI----DDMAAFIDTPSMLIVVGGSIMVVMFRSSLGEFLGAIAV 58
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH-IDDPYNSTIFTSIPTVLEN 119
+ + F K D +++ + L +K E ID+P+ S +
Sbjct: 59 MGKTFKNKI---DEPGALIEQIVELATIARKDGMIALEGQEIDNPFMSKAVS-------- 107
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
++V I++ +D E+ + S GE PA+G++G
Sbjct: 108 -------------MLVDGTDPAIIKSSLDRELISTKQRHARGAKIFSAWGEIAPAMGMIG 154
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ +GN+ PK +G A+ V+L T+ G IL+ +C P+ ++++ +
Sbjct: 155 TLIGLVQMLGNMGD-PKSIGPAMAVALLTTMYGAILANVICLPIAMKLENQADLEAANNE 213
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
++ + ++ +G P+V ++ L ER +
Sbjct: 214 LIIEGILFIQDGGNPRVLSDFLGSFLGPKERSKLAAA 250
>gi|325997690|gb|ADZ49898.1| Flagellar motor rotation protein [Helicobacter pylori 2017]
Length = 247
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 99/261 (37%), Gaps = 22/261 (8%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYK 68
+ + I G GNP +I ++I+ L + + +K + + +F
Sbjct: 1 MAVASISLGDIFEDGNPLHIIHLSSVIIIGPPSLFAAMTGTHARYVKAAYKEIKIVFLNP 60
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+ + + +K L L +K E + + F +
Sbjct: 61 KINLN---ETIKNLVELATLARKDGVLSLEGRVAQIED-----------------DFTRN 100
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ MII G ++ ++ I+ + H GE+ P +G+VGA++G++ A+
Sbjct: 101 GLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLAL 159
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
L +P + I + T T+ GI+ SY++ P ++K+ + ++ + ++
Sbjct: 160 QKL-DNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGI 218
Query: 249 MNGAIPQVAIEYGRKVLPLSE 269
NG P+ + E
Sbjct: 219 ANGENPRDLENKLLNYIAPGE 239
>gi|224436414|ref|ZP_03657434.1| flagellar motor protein MotA [Helicobacter cinaedi CCUG 18818]
gi|313142932|ref|ZP_07805125.1| flagellar motor protein MotA [Helicobacter cinaedi CCUG 18818]
gi|313127963|gb|EFR45580.1| flagellar motor protein MotA [Helicobacter cinaedi CCUG 18818]
Length = 256
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 23/277 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+GL + + G + GGNP LI ++I+ + + +K +
Sbjct: 3 LTTILGLIGAVTSLSIGDFLEGGNPLHLIHISSLIIIIPTAGCAAMSSTHPTHVKGALKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +FG + + + ++ + L +K E +
Sbjct: 63 LKIVFGASKVNLN---ETIRTIVELSTLARKDGVLSLEGKAAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + MII G ++ + M+ +I+ + H E+ P +G+VGA
Sbjct: 106 ---DFLRQALSMIIDGR-DAHAVREDMEVQIESLEEYYHGSAHYWVTYAETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L PK + I + T T+ GI +Y+L P ++ + R ++
Sbjct: 162 VMGLMLALQ-LLDDPKAMAAGIAGAFTATVTGIFCAYALFGPWGHKMIAKSKDIIRERMV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
V + ++ NG P+ E +P E P I
Sbjct: 221 VLEGVVGIANGDNPRNLEEKLLGFIPPGE-PKISQFE 256
>gi|32475798|ref|NP_868792.1| chemotaxis pomA protein [Rhodopirellula baltica SH 1]
gi|32446341|emb|CAD76169.1| chemotaxis pomA protein [Rhodopirellula baltica SH 1]
gi|327540986|gb|EGF27542.1| chemotaxis pomA protein [Rhodopirellula baltica WH47]
Length = 253
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 104/270 (38%), Gaps = 22/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++++GL I I+ I ++V G ++ P+ I S +
Sbjct: 3 IASLLGLIFAIGLILVSILLGNAPFSAFIDIPSGLVVVGGAFAAALICFPMGSILKSPII 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L++ K + ++K + L ++ E+ I + NS + T +
Sbjct: 63 ALKVILNKG---EDRLALIKSIVELAEIARRDGLLALESKIGEINNSLVKTGLQ------ 113
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ V +E ++ E+ + + + +G PA G++G
Sbjct: 114 ------------MAVDGTAPEIVEEVLRTEVAGMAMRHREGKSIMDQLGRFAPAYGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + ++S P +G + V+L TL G I++ +P ++ + I
Sbjct: 162 LMGLIMMLQDMSD-PSGIGAGMAVALITTLYGAIVANVFFSPFAEKLGLMSRNEQLSMEI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+ + + LP +R
Sbjct: 221 AIRGVMAIQSGESPRAIDQKLQTYLPAKQR 250
>gi|209885629|ref|YP_002289486.1| chemotaxis protein PomA [Oligotropha carboxidovorans OM5]
gi|209873825|gb|ACI93621.1| chemotaxis protein PomA [Oligotropha carboxidovorans OM5]
Length = 257
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 102/271 (37%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPL-KVIKDSGV 59
++T +GL + +I GG+ ++ I ++I+ G + ++ PL ++ +
Sbjct: 3 ITTSVGLVAGSI-VIVMLILTGGDLHMFISEHAMIIIFGGSISATLIRFPLVSILHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F + D L L +K E ++ P
Sbjct: 62 GAKYAFTMSRSTARSLVDELA---GLAEIARKQGPMGLEK-VETP--------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + ++ + D L + +G+ PA G+VG
Sbjct: 103 ---DPFLAKGIRYVADGYDMDF-IRDNLERDRDNFLMHLEEGSKIYRAVGDCAPAFGMVG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ N++ P LG + +L TL G +++ C P+ ++ L +
Sbjct: 159 TLIGMVQMFANMTD-PSKLGPYMATALLATLYGAVIANLFCLPIADKLHGKLLDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ ++ + P + E LP R
Sbjct: 218 IIIDGILMIRDAKSPTLVREMLLAYLPEKHR 248
>gi|315638942|ref|ZP_07894113.1| flagellar motor protein A [Campylobacter upsaliensis JV21]
gi|315480971|gb|EFU71604.1| flagellar motor protein A [Campylobacter upsaliensis JV21]
Length = 258
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 109/269 (40%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ + + I G GGNP ++ +IV + + K++K +
Sbjct: 3 LTTILGMVLAVTSISVGDILEGGNPLHVLHFSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + L ++ E+ ++ N
Sbjct: 63 LKVVFKGSGVN---LPERIAQLIEFAIVARRDGLLALESRTNEIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M M++ G + EI M+ + + + + GE+ P +G+VGA
Sbjct: 106 ---EFLKNAMMMLVDGKSFE-EIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ + + ++
Sbjct: 162 VFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDFVKEQVV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A+ GA P+ L +
Sbjct: 221 ITEAIKGIAEGANPRDLEAKLFNFLSHDD 249
>gi|149375536|ref|ZP_01893306.1| flagellar motor protein PomA [Marinobacter algicola DG893]
gi|149360241|gb|EDM48695.1| flagellar motor protein PomA [Marinobacter algicola DG893]
Length = 258
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 112/276 (40%), Gaps = 25/276 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IGL IL I G +P + I P I+IV G + + +
Sbjct: 4 ATLIGLVGAILLIASAVIL-GVSPDVFINPPSILIVVGGTMLVVLAKFSFSQFFSAFKVA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F ++ D +L+ + K+G E + P
Sbjct: 63 ARAFKFRLPDTRESID--ELIEVANVARKQGVLGLEEREVGSP----------------- 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G + I++L+ +E + L + M + PA+G++G +
Sbjct: 104 ---FLGQGIQMLVDGQ-NAETIKHLLSKERLLTLDHNRSGAKVFTAMADVAPAMGMIGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ + N+ + PK +G A+ V+L TL G +++ + P+ ++ ++ RL +
Sbjct: 160 IGLVQMLSNM-EDPKSIGPAMAVALLTTLYGAMIATMIATPIADKLSLRMTEEARLQSLY 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
AL+A G P++ + L ER
Sbjct: 219 IDALVAIKEGTNPRIIEQMLSSYLTPKEREKTSEAE 254
>gi|254438117|ref|ZP_05051611.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
gi|198253563|gb|EDY77877.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
Length = 266
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 108/276 (39%), Gaps = 25/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++++GL T I GG +GG + ++IV G + P+ S +
Sbjct: 16 IASLVGLIGTFAMI-GGAMVVGGGLAPFLDIPSVLIVIGGTFFAAMYTTPIGTFFASFGA 74
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F ++ +++ + L +K E
Sbjct: 75 MAKAFMPPVKKKNV---LIERMVELAGVARKDGMMALEGQ-------------------E 112
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F M++++ G + ++ + EI + + I + PA+G++G
Sbjct: 113 VPDKFFEKGMQLLVDGADETKLVQQ-LKAEIKSMKSRHEMNQNVIKAWVDLAPAMGMIGT 171
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GN+S P+ +G A+ V+L T+ G I++ + P+ S+++ + +
Sbjct: 172 LIGLVLMLGNMSD-PQAIGPAMAVALLTTMYGAIVANVIFAPMLSKLEGYTAYEVVYREM 230
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+ L + G P+ + LP + IE
Sbjct: 231 IVLGLRSIARGESPRNIQDQMVSNLPPKMQAKIEAA 266
>gi|57237388|ref|YP_178401.1| flagellar motor protein MotA [Campylobacter jejuni RM1221]
gi|86149176|ref|ZP_01067408.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88597298|ref|ZP_01100533.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|205356013|ref|ZP_03222781.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8421]
gi|218561996|ref|YP_002343775.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|57166192|gb|AAW34971.1| chemotaxis protein MotA, putative [Campylobacter jejuni RM1221]
gi|85840534|gb|EAQ57791.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88190359|gb|EAQ94333.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359702|emb|CAL34488.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|205346137|gb|EDZ32772.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8421]
gi|284925609|gb|ADC27961.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315057757|gb|ADT72086.1| Flagellar motor rotation protein MotA [Campylobacter jejuni subsp.
jejuni S3]
gi|315927860|gb|EFV07185.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
Length = 258
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 108/269 (40%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP ++ +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + L ++ E+ + N
Sbjct: 63 LKVVFKGSGVN---LPERIAQLIEFAIIARRDGLLALESRTSEIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M M++ G + EI M+ + + + + GE+ P +G+VGA
Sbjct: 106 ---EFLKNAMMMLVDGKSFE-EIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ + + I+
Sbjct: 162 VFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLVKEQIV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A+ GA P+ L +
Sbjct: 221 ITEAIKGIAEGANPRDLEAKLFNFLSHDD 249
>gi|254457896|ref|ZP_05071323.1| MotA/TolQ/ExbB proton channel [Campylobacterales bacterium GD 1]
gi|207085289|gb|EDZ62574.1| MotA/TolQ/ExbB proton channel [Campylobacterales bacterium GD 1]
Length = 254
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 104/272 (38%), Gaps = 23/272 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ + + ++G G I ++IV G +G +++ +K
Sbjct: 3 LGTVVGIVLILALLLGAMSM-GVGVGAYIDIPSVLIVVGGSIGALMVSYKPTQMKSFTKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + +++K L +K E+ + N+
Sbjct: 62 FMVAIKPTI---EDEVELIKKLVDFATKARKDGILALESEV-----------------NS 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E F+ + M I G + I L++ +++ S+ A+G+VG
Sbjct: 102 EPNEFLKKGLSMAIDG-SEPDTIRELLEIDMEQTSERHKINGSIFSNWAALAGAMGMVGT 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N++ P +G ++ V+L T+ G I+ P+ + ++ + +
Sbjct: 161 LIGLVAMLLNMAD-PSAIGPSMAVALLTTMYGAIIGNVFGTPIAIILGIRNDEETLVKEM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ +++ +G P+V L +R S
Sbjct: 220 ILSGIMSIQSGDAPRVLEAKLLAYLAPKDRVS 251
>gi|303249000|ref|ZP_07335245.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302489586|gb|EFL49526.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 259
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/277 (18%), Positives = 110/277 (39%), Gaps = 21/277 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I + + + + + IV G L + PLK + +
Sbjct: 3 IATVIGIVFGIAILTFATVLSTDSAGVFVNFPGLAIVLGGTLASTFICFPLKEVMRVFNT 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + L D Y D + + + I++
Sbjct: 63 FLVALKREELPTDHYIDAIVHIARQASARGRIQLEMALPGIEN----------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G +R EI+ ++D I+ ++L M + PA GI+G
Sbjct: 106 ---EFLQSAIQMLVDGYSRE-EIQEILDTRIEQTYQQELSSAGIYRTMAKLSPAYGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M ++S LG + V+LT TL GI+L+ + P+ +++ ++ L +
Sbjct: 162 LIGLIGMMQSMSVGLGNLGAHMAVALTTTLYGILLANLIFLPIAVKVEKRIEERVILMCV 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
++ + + + ++ + LP +IE
Sbjct: 222 IRDGTLFIKDKTPAAIVLDKLKAYLPTRRWAAIEHEE 258
>gi|126697828|ref|YP_001086725.1| chemotaxis protein [Clostridium difficile 630]
gi|255099424|ref|ZP_05328401.1| chemotaxis protein [Clostridium difficile QCD-63q42]
gi|115249265|emb|CAJ67078.1| Flagellar motor rotation protein MotA [Clostridium difficile]
Length = 272
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/290 (19%), Positives = 114/290 (39%), Gaps = 31/290 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGN--PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
T IGL ++ + ++ G A G + I+I G ++ + IK
Sbjct: 7 LTFIGLIVSTVLVLVG-AAKGSSSGLKNFFDVSSILITVLGSFGALMITFTIDDIKLIKN 65
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH---IDDPYNSTIFTSIPTV 116
+L F ++ + D+L+ L +K E+ I+DP
Sbjct: 66 ALQYSFKTMSVSK---LDLLEQFKTLSKKARKEGLLSIESDVMGIEDP------------ 110
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
F+ + + I G EI ++++ EID + + G PA G
Sbjct: 111 --------FMKKGLELCIDG-LEINEIRSILELEIDSVEDTNNRYSKLFKTWGTFAPAFG 161
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++G ++G+I+ + +L+ SP ++ + +G +L T G +L+ NP+ I K+
Sbjct: 162 MLGTLIGLIQMLADLT-SPDLIASGMGKALITTFYGSLLANIALNPIAYNIDEKTEKEIY 220
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHN 286
+ ++ + +I+ +G V E L +E+ I + + N
Sbjct: 221 VKEMMLEGIISIQSGESSIVVEERLATYLSNNEKLEIMKSNKNTERAMSN 270
>gi|152997426|ref|YP_001342261.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150838350|gb|ABR72326.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 245
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 48/252 (19%), Positives = 99/252 (39%), Gaps = 22/252 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+ GL I + + GG +L+ +IV +G ++ + ++ + V +
Sbjct: 5 TLAGLLIAFSSVFLANWLGGGEIILLLNLPSAIIVIVGSIGATLIQSSIQEAARALVLIK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ L+ L + ++ S E+ ++ N
Sbjct: 65 WSLFPPVY---DFNSARALINNLAHKARRLSLLALESDVEALNNR--------------- 106
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F ++M I G + + + ++ I +++K I +G P +GI+G++L
Sbjct: 107 --FSNRALQMAIDGT-DPDLLADRLHDDAVRIYDKRMKSVSFIESIGGYAPTLGIMGSVL 163
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+AM NL SP+ LG I V+ TL G + + P+ ++ K+ + ++
Sbjct: 164 GLIQAMANL-DSPEALGHGIAVAFVSTLYGQGFANLVIFPIAKKLTGYVDKELLYHQMLI 222
Query: 243 KALIAYMNGAIP 254
+ G P
Sbjct: 223 DGICGIATGKHP 234
>gi|153952523|ref|YP_001398612.1| flagellar motor protein MotA [Campylobacter jejuni subsp. doylei
269.97]
gi|152939969|gb|ABS44710.1| putative chemotaxis protein MotA [Campylobacter jejuni subsp.
doylei 269.97]
Length = 258
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 112/278 (40%), Gaps = 23/278 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + L ++ E+ ++ N
Sbjct: 63 LKVVFKGSGVN---LPERIAQLIEFAIIARRDGLLALESRTNEIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M M++ G + EI M+ + + + + GE+ P +G+VGA
Sbjct: 106 ---EFLKNAMMMLVDGKSFE-EIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ + + I+
Sbjct: 162 VFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDLVKEQIV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+ +A+ GA P+ L + P I +
Sbjct: 221 ITEAIKGIAEGANPRDLEAKLFNFLSHDD-PKISQFDK 257
>gi|299133622|ref|ZP_07026816.1| MotA/TolQ/ExbB proton channel [Afipia sp. 1NLS2]
gi|298591458|gb|EFI51659.1| MotA/TolQ/ExbB proton channel [Afipia sp. 1NLS2]
Length = 257
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 102/271 (37%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPL-KVIKDSGV 59
++T IGL + +I GG+ ++ I ++I+ G + ++ PL ++ +
Sbjct: 3 ITTSIGLVAGSI-VIVALVLTGGDLHMFISEHAMIIIFGGSISATLIRFPLVSILHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F D L + + +K E ++ P
Sbjct: 62 GAKYAFTMSRTTARGLVDELAGVAEI---ARKQGPVGLEK-VETP--------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + ++ + D L + +G+ PA G+VG
Sbjct: 103 ---DPFLAKGIRYVADGYDMDF-IRDNLERDRDNFLMHLDEGSKIYRAVGDCAPAFGMVG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ N++ P LG + +L TL G +++ C P+ ++ L +
Sbjct: 159 TLIGMVQMFANMTD-PSKLGPYMATALLATLYGAVVANLFCLPIADKLHGKLLDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
I+ ++ + P + E LP R
Sbjct: 218 IIIDGILMIRDAKSPTLVREMLLAYLPEKHR 248
>gi|27378911|ref|NP_770440.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
gi|27352061|dbj|BAC49065.1| pomA [Bradyrhizobium japonicum USDA 110]
Length = 257
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 99/271 (36%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
+ T +GL I+ +I MGG+ ++ I ++I+ G + ++ PL + +
Sbjct: 3 IMTGVGLTAGII-VIAAMIFMGGDLHMFISEHAMIIIFGGSISATMIRFPLSALLHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F L D L + + + E
Sbjct: 62 GAKFAFTMSRLSAHDLVDELARIAEIARKQGPVGLEKVETD------------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + ++ + D L + +G+ PA G++G
Sbjct: 103 ---EPFLAKGIRYVADGYDLDF-IRDNLERDRDNFLMHLDEGSKIYRAIGDCAPAFGMIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ N++ P LG + +L TL G +++ C P+ ++ L +
Sbjct: 159 TLIGMVQMFANMTD-PSKLGPFMATALLATLYGALVANLFCLPIADKLHGKLLDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 218 LIIDGILMIRDSKSPTLVREMLLAYLPEKHR 248
>gi|126665355|ref|ZP_01736337.1| flagellar motor protein PomA [Marinobacter sp. ELB17]
gi|126629983|gb|EBA00599.1| flagellar motor protein PomA [Marinobacter sp. ELB17]
Length = 261
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 111/274 (40%), Gaps = 25/274 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IGL + +I +G +P + + ++IV G L + + + +
Sbjct: 4 ATLIGLVGAM-MLIASAVILGVSPDVFLNVPALLIVIGGSLLVVLAKFSFEQFLGAFKAA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ F +K D L + ++ E
Sbjct: 63 IRAFKFKLPETRAAIDE---LVDIANVARRQGVLGLEGR-------------------EV 100
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ F+ + ++M++ G + I+ L+ +E + L + + PA+G++G +
Sbjct: 101 SSPFLGNGIQMLVDGQDGA-TIKQLLSKEQLMTLEHNRSGAKVFTAFADVGPAMGMIGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ + N+ + PK +G A+ V+L TL G +++ + +P+ ++ ++ R+ +
Sbjct: 160 IGLVQMLANM-EDPKSIGPAMAVALLTTLYGAMMATMIASPIADKLSLRMTQEARMQSLY 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
AL A G P++ + L ER +
Sbjct: 219 IDALGAIQEGVNPRIIEQMLSSYLSPKEREKVPE 252
>gi|311696901|gb|ADP99774.1| flagellar motor protein PomA [marine bacterium HP15]
Length = 256
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 115/276 (41%), Gaps = 25/276 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+IGL + +I +G +P + I P ++IV G + + G
Sbjct: 4 ATLIGL-VGASLLIASAVILGTSPLVFINPASLLIVVGGTMLVVLAKFSFAQFL--GAFK 60
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+K +T + +L+ I K+G + I P
Sbjct: 61 AAARAFKFKLPETQASIEELVDIANVARKEGVLGLEDREISSP----------------- 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++M++ G I+ L+++E + L + M + PA+G++G +
Sbjct: 104 ---FLGQGIQMLVDGQ-DGKTIKELLNKERLMTLDHNRSGAKVFTAMADVAPAMGMIGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ + N+ + PK +G A+ V+L TL G +++ + P+ ++ ++ R+ +
Sbjct: 160 IGLVQMLSNM-EDPKSIGPAMAVALLTTLYGAMIATMIATPIADKLSLRMTEEARMQSLY 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
AL+A G P++ + LP ER +
Sbjct: 219 IDALVAIQEGTNPRIIEQMLSSYLPPKEREKVAEPE 254
>gi|57168475|ref|ZP_00367609.1| probable flagellar motor proton channel Cj0337c [Campylobacter coli
RM2228]
gi|305432894|ref|ZP_07402052.1| flagellar motor protein A [Campylobacter coli JV20]
gi|57020283|gb|EAL56957.1| probable flagellar motor proton channel Cj0337c [Campylobacter coli
RM2228]
gi|304444048|gb|EFM36703.1| flagellar motor protein A [Campylobacter coli JV20]
Length = 258
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 109/269 (40%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + L ++ E+ ++ N
Sbjct: 63 LKIVFKGSGVN---LPERIAQLIEFAIIARRDGLLALESRTNEIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M M++ G + EI M+ + + + + GE+ P +G+VGA
Sbjct: 106 ---EFLRNAMMMLVDGKSFE-EIHESMEIQTEQLEEHYKECAEYWIIFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ + + I+
Sbjct: 162 VFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDLVKEQIV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A+ GA P+ L +
Sbjct: 221 ITEAIKGIAEGANPRDLEAKLFNFLSHDD 249
>gi|86151159|ref|ZP_01069374.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153687|ref|ZP_01071890.1| chemotaxis protein motA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157414634|ref|YP_001481890.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
81116]
gi|283955762|ref|ZP_06373253.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni 1336]
gi|315123902|ref|YP_004065906.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841506|gb|EAQ58753.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85842648|gb|EAQ59860.1| chemotaxis protein motA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157385598|gb|ABV51913.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni 81116]
gi|283792717|gb|EFC31495.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni 1336]
gi|307747274|gb|ADN90544.1| Chemotaxis protein motA [Campylobacter jejuni subsp. jejuni M1]
gi|315017624|gb|ADT65717.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315931585|gb|EFV10551.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 258
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/278 (19%), Positives = 112/278 (40%), Gaps = 23/278 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP ++ +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + L ++ E+ ++ N
Sbjct: 63 LKVVFKGSGVN---LPERIAQLIEFAIIARRDGLLALESRTNEIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M M++ G + EI M+ + + + + GE+ P +G+VGA
Sbjct: 106 ---EFLKNAMMMLVDGKSFE-EIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ + + I+
Sbjct: 162 VFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDLVKEQIV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
+ +A+ GA P+ L + P I +
Sbjct: 221 ITEAIKGIAEGANPRDLEAKLFNFLSHDD-PKISQFDK 257
>gi|332702473|ref|ZP_08422561.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332552622|gb|EGJ49666.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 274
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 53/278 (19%), Positives = 119/278 (42%), Gaps = 21/278 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ + + Y +P + + + IV G + PLK +
Sbjct: 3 IATILGILSGAVVLGWATYHSTSDPMVFVNYPGLAIVLGGIAAATFICYPLKEVMRVFQV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + L Y D + + + + + H+++ S+P +
Sbjct: 63 FLLALRREELPIGAYIDEI-------VKIARTASARGKVHLEN--------SLPGIENQ- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G +R EI+ ++D I+ +++ M + PA GI+G
Sbjct: 107 ----FMRHAVQMLVDGYSRE-EIKEILDTRIEQGYEQEMSSASIYRTMAKLAPAFGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + +L + LG ++ V+LT TL G +L+Y L P+ +++ ++ L +
Sbjct: 162 LIGLIGMLQSLQNNMASLGPSMAVALTTTLYGALLAYVLFLPIAIKVEKRIEERVVLMQV 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
++ ++ + + ++ + LP SI+ Q
Sbjct: 222 IRDGILFIHDKTPASIVLDKLKAYLPPRRWKSIQAGRQ 259
>gi|117620588|ref|YP_857807.1| chemotaxis protein PomA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117561995|gb|ABK38943.1| chemotaxis protein PomA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 252
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++IG+ + ++ G GG + + + I L +M L +
Sbjct: 3 LGSLIGIVLGFGVVVYGMLL-GGPMSMYVDMPSVYITILGSLFICMMKFNLGQFLMAFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F YK D D++ L +KG E
Sbjct: 62 AGKAFMYKGDKLD---DLIAKAVELADAARKGGFLALEAA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF+ + M++ G+ + + +M+++I++ + +G+ PA+G++G
Sbjct: 100 IPNTFMKKGIDMLVDGH-DADVVRAVMEKDIELTSERHVIAVKVFRSLGDLGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G A+ V+L TL G I + + P+ +++ ++ +
Sbjct: 159 LVGLVAMLANMSD-PKSIGPAMAVALLTTLYGAIEANMIAIPIADKLELRSGEEQLSRTL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++ +G P+V + L S+R
Sbjct: 218 ILDAIMGIQDGQNPRVIQAMLQNYLNQSKR 247
>gi|15640908|ref|NP_230539.1| flagellar motor protein PomA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121588121|ref|ZP_01677868.1| chemotaxis protein PomA [Vibrio cholerae 2740-80]
gi|121728327|ref|ZP_01681357.1| chemotaxis protein PomA [Vibrio cholerae V52]
gi|147674601|ref|YP_001216370.1| flagellar motor protein PomA [Vibrio cholerae O395]
gi|153215992|ref|ZP_01950214.1| chemotaxis protein PomA [Vibrio cholerae 1587]
gi|153802296|ref|ZP_01956882.1| chemotaxis protein PomA [Vibrio cholerae MZO-3]
gi|153817210|ref|ZP_01969877.1| chemotaxis protein PomA [Vibrio cholerae NCTC 8457]
gi|153823685|ref|ZP_01976352.1| chemotaxis protein PomA [Vibrio cholerae B33]
gi|153827038|ref|ZP_01979705.1| chemotaxis protein PomA [Vibrio cholerae MZO-2]
gi|227081068|ref|YP_002809619.1| chemotaxis protein PomA [Vibrio cholerae M66-2]
gi|229505503|ref|ZP_04395013.1| Flagellar motor rotation protein MotA [Vibrio cholerae BX 330286]
gi|229510827|ref|ZP_04400306.1| Flagellar motor rotation protein MotA [Vibrio cholerae B33]
gi|229513009|ref|ZP_04402475.1| Flagellar motor rotation protein MotA [Vibrio cholerae TMA 21]
gi|229517948|ref|ZP_04407392.1| Flagellar motor rotation protein MotA [Vibrio cholerae RC9]
gi|229523311|ref|ZP_04412718.1| Flagellar motor rotation protein MotA [Vibrio cholerae TM 11079-80]
gi|229608522|ref|YP_002879170.1| flagellar motor protein PomA [Vibrio cholerae MJ-1236]
gi|254285565|ref|ZP_04960529.1| chemotaxis protein PomA [Vibrio cholerae AM-19226]
gi|254848027|ref|ZP_05237377.1| flagellar motor protein PomA [Vibrio cholerae MO10]
gi|255744683|ref|ZP_05418634.1| Flagellar motor rotation protein MotA [Vibrio cholera CIRS 101]
gi|262161184|ref|ZP_06030295.1| Flagellar motor rotation protein MotA [Vibrio cholerae INDRE 91/1]
gi|262168687|ref|ZP_06036382.1| Flagellar motor rotation protein MotA [Vibrio cholerae RC27]
gi|297581276|ref|ZP_06943200.1| chemotaxis protein PomA [Vibrio cholerae RC385]
gi|298498986|ref|ZP_07008793.1| chemotaxis protein PomA [Vibrio cholerae MAK 757]
gi|9655347|gb|AAF94054.1| chemotaxis protein PomA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|51241595|emb|CAH17907.1| flagellar motor protein PomA [Vibrio cholerae]
gi|121547612|gb|EAX57711.1| chemotaxis protein PomA [Vibrio cholerae 2740-80]
gi|121629382|gb|EAX61812.1| chemotaxis protein PomA [Vibrio cholerae V52]
gi|124114505|gb|EAY33325.1| chemotaxis protein PomA [Vibrio cholerae 1587]
gi|124122178|gb|EAY40921.1| chemotaxis protein PomA [Vibrio cholerae MZO-3]
gi|126512244|gb|EAZ74838.1| chemotaxis protein PomA [Vibrio cholerae NCTC 8457]
gi|126518788|gb|EAZ76011.1| chemotaxis protein PomA [Vibrio cholerae B33]
gi|146316484|gb|ABQ21023.1| chemotaxis protein PomA [Vibrio cholerae O395]
gi|149739079|gb|EDM53375.1| chemotaxis protein PomA [Vibrio cholerae MZO-2]
gi|150424427|gb|EDN16364.1| chemotaxis protein PomA [Vibrio cholerae AM-19226]
gi|227008956|gb|ACP05168.1| chemotaxis protein PomA [Vibrio cholerae M66-2]
gi|227012712|gb|ACP08922.1| chemotaxis protein PomA [Vibrio cholerae O395]
gi|229339674|gb|EEO04689.1| Flagellar motor rotation protein MotA [Vibrio cholerae TM 11079-80]
gi|229344663|gb|EEO09637.1| Flagellar motor rotation protein MotA [Vibrio cholerae RC9]
gi|229349902|gb|EEO14856.1| Flagellar motor rotation protein MotA [Vibrio cholerae TMA 21]
gi|229350792|gb|EEO15733.1| Flagellar motor rotation protein MotA [Vibrio cholerae B33]
gi|229357726|gb|EEO22643.1| Flagellar motor rotation protein MotA [Vibrio cholerae BX 330286]
gi|229371177|gb|ACQ61600.1| Flagellar motor rotation protein MotA [Vibrio cholerae MJ-1236]
gi|254843732|gb|EET22146.1| flagellar motor protein PomA [Vibrio cholerae MO10]
gi|255737714|gb|EET93108.1| Flagellar motor rotation protein MotA [Vibrio cholera CIRS 101]
gi|262022805|gb|EEY41511.1| Flagellar motor rotation protein MotA [Vibrio cholerae RC27]
gi|262028934|gb|EEY47587.1| Flagellar motor rotation protein MotA [Vibrio cholerae INDRE 91/1]
gi|297534592|gb|EFH73429.1| chemotaxis protein PomA [Vibrio cholerae RC385]
gi|297543319|gb|EFH79369.1| chemotaxis protein PomA [Vibrio cholerae MAK 757]
gi|327483630|gb|AEA78037.1| Flagellar motor rotation protein MotA [Vibrio cholerae LMA3894-4]
Length = 254
Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 113/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + +I GG+ + + ++IV G + +M + +
Sbjct: 3 LATLVGLIGGMAFVIMAMVL-GGSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA + D++ + + +KG E E
Sbjct: 62 AGKAFMFKADAPE---DLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + + + ++I + K G+ PA+G++G
Sbjct: 100 IPNPFMQKGIDLLVDGH-DADVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L S+R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNASKR 247
>gi|212636368|ref|YP_002312893.1| flagellar motor protein PomA [Shewanella piezotolerans WP3]
gi|212557852|gb|ACJ30306.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 255
Score = 151 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL +I A GG I I I+IV L +M LK +
Sbjct: 3 LATLIGLIGAFAFVIMAM-ASGGGIGIFINVPSILIVMIGSLFVVMMKYNLKQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K + D+++ + +KG E
Sbjct: 62 AAKAFIFKIDKPE---DLIEQSITMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F+ + M++ G+ + + ++++I + +G+ PA+G++G
Sbjct: 100 ISNSFMQKAVDMLVDGHDGD-VVRDALEKDIALTEQRHKTGVGIFKSIGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +++ + P+ ++ ++ +
Sbjct: 159 LIGLVGMLSNMDD-PKSIGPAMAVALLTTLYGAVVANMVAIPIADKLSLRMGEEMLNRNL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++A +G P+V + + L R
Sbjct: 218 IMDAVLAIQDGQNPRVIEGFLKNYLSEKAR 247
>gi|153830565|ref|ZP_01983232.1| chemotaxis protein PomA [Vibrio cholerae 623-39]
gi|254225117|ref|ZP_04918731.1| chemotaxis protein PomA [Vibrio cholerae V51]
gi|125622504|gb|EAZ50824.1| chemotaxis protein PomA [Vibrio cholerae V51]
gi|148873963|gb|EDL72098.1| chemotaxis protein PomA [Vibrio cholerae 623-39]
Length = 254
Score = 151 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 113/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + ++ GG+ + + ++IV G + +M + +
Sbjct: 3 LATLVGLIGGMAFVVMAMIL-GGSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA + D++ + + +KG E E
Sbjct: 62 AGKAFMFKADAPE---DLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + + + ++I + K G+ PA+G++G
Sbjct: 100 IPNPFMQKGIDLLVDGH-DADVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +LS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L S+R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNASKR 247
>gi|283955186|ref|ZP_06372688.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 414]
gi|283793399|gb|EFC32166.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 414]
Length = 258
Score = 151 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 107/269 (39%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP +I +IV + A K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAAFCAMTATHKKIVKAAYKD 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + L ++ E+ + N
Sbjct: 63 LKIVFKGSGVN---LPERIAQLIEFAIIARRDGLLALESKTGEIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ M M++ G + EI M+ + + + + GE+ P +G+VGA
Sbjct: 106 ---EFLKSAMMMLVDGKSFE-EIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I A+ L +P+ + I + T T+ GI +Y+L P ++K+ + + I+
Sbjct: 162 VFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLVKEQIV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A+ GA P+ L +
Sbjct: 221 ITEAIKGIAEGANPRDLEAKLFNFLSHDD 249
>gi|237750613|ref|ZP_04581093.1| flagellar motor rotation protein [Helicobacter bilis ATCC 43879]
gi|229373703|gb|EEO24094.1| flagellar motor rotation protein [Helicobacter bilis ATCC 43879]
Length = 256
Score = 151 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 23/277 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++I+G+ + I + G GNP L+ ++IV + A +K +
Sbjct: 3 LTSILGIILAITSLSVGDILEDGNPVHLVHLSSVIIVIPTAAMCAMTATHAHAVKAAFKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + ++ + +K E+ + +
Sbjct: 63 LKIVFVNPKVNMNN---TIRQMVEFSSEARKNGLLTLESRVSQLED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F + M MII G + ++ M+ +I+ + + H GE+ P +G+VGA
Sbjct: 106 ---DFTREAMSMIIDGR-EAKDVREDMEIQIEQLEHYYHSAAHYWIQFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G+I A+ L +P + IG + T T+ GI+ +Y++ P ++K+ ++
Sbjct: 162 VCGLILAL-TLLDNPAAMAAGIGGAFTATVTGIMGAYAIFGPFGQKMKAKSHDIIIEKVM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+ +A++ NG P+ +P E P I
Sbjct: 221 ILEAVVGIANGDNPRNLEAKLLGFIPPGE-PKISQFE 256
>gi|146277437|ref|YP_001167596.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
gi|145555678|gb|ABP70291.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 253
Score = 151 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 43/259 (16%), Positives = 98/259 (37%), Gaps = 25/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ IIGL ++ ++G GG + IV + P V +
Sbjct: 3 IAAIIGLIGAVVMVVGSMIYAGG-VTPFVDIPSFFIVVVGTAFIVLAMKPFPVFLGHFKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++F +V+ ++ L +K E
Sbjct: 62 MSKVFKPTRF---DTNEVISIMVELSNTARKDGIMALEG-------------------KA 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F +++++ G + ++ + EI + A+ + PA+G+VG
Sbjct: 100 VPDPFFEKGLQLLVDGTDEAKLVKQ-LKYEIKAMKVRHEAYQGAVKAWIDIGPAMGMVGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GN++ PK +G A+ V+L TL G +++ + P+ ++++ + +
Sbjct: 159 LIGLVLMLGNMTD-PKSIGPAMAVALLTTLYGALMANVIFAPILNKLEGYSADEVTYREL 217
Query: 241 VKKALIAYMNGAIPQVAIE 259
V + L G +V +
Sbjct: 218 VIEGLRGIARGESARVIED 236
>gi|283853399|ref|ZP_06370645.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
gi|283571212|gb|EFC19226.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
Length = 264
Score = 151 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 113/279 (40%), Gaps = 21/279 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I + + + + I + IV G L + PLK + +
Sbjct: 3 IATVIGIVFGITILGFATFLSTDSAGVFINFPGLAIVLGGTLASTFICFPLKEVMRVFNT 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + L D Y + + + + E + N
Sbjct: 63 FLIALKREELPTDNYIEEI---VEIARHASTRGTIHLEKALPGIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++M++ G +R EI+ ++D I+ ++L M + PA G++G
Sbjct: 106 ---EFLQSAIQMLVDGYSRE-EIQEILDTRIEQTYQQELSSAGIYRTMAKLAPAYGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I M ++S LG + V+LT TL GI+L+ + P+ +++ ++ L +
Sbjct: 162 LIGLIGMMQSMSVGLGNLGAHMAVALTTTLYGILLANLILLPIAIKVEKRIEERIILMCV 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
++ + + + ++ + LP SIE +E
Sbjct: 222 IRDGTLFIKDKTPAAIVLDKLKAYLPTRRWSSIERKDKE 260
>gi|224369951|ref|YP_002604115.1| MotA2 [Desulfobacterium autotrophicum HRM2]
gi|223692668|gb|ACN15951.1| MotA2 [Desulfobacterium autotrophicum HRM2]
Length = 256
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 111/276 (40%), Gaps = 25/276 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++++G+ I I+G + GG+ + I ++IV G L ++ + + + +
Sbjct: 3 IASLLGIASGIFLIVGAIFL-GGDIHNFINIPGLMIVGGGSLATTLLTFQFRDVFAAFKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + ++ + + ++ L ++ E +
Sbjct: 62 AYFVFSKE---KEDPNEAVAIMISLCQISRRQGLLEL-------------------SKIE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ +I G++ I N + EI+ + MG PA G++G
Sbjct: 100 TDSGFLKKACGLIADGSSND-VIRNALITEIESLKMRHFIVQDVFRKMGIYSPAFGMLGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + NL Q P +G A+ +L T G ++S P+ ++K+ + + I
Sbjct: 159 LIGLVQMLSNL-QEPSQIGPAMATALLTTFYGSLMSTMFFLPIAGKLKARTILEVINLEI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+ + I+ ++ P + E + R ++ +
Sbjct: 218 MLEGSISILDNNNPVILYEKLSSFISARLRKPMKEM 253
>gi|92117048|ref|YP_576777.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799942|gb|ABE62317.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
Length = 257
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 97/272 (35%), Gaps = 26/272 (9%)
Query: 1 MSTIIGLFITILCIIGG-FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SG 58
M + G + I+ MGG+ ++ + ++I+ G ++ PL I
Sbjct: 1 MDIMTGAGLAFGMIVVAVMVFMGGDLHMFVSEHAMIIIFGGATAATMIRFPLGAILHGLP 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F L D L + + +K E +
Sbjct: 61 LGAKFAFTMSRLTARDLVDELARIAEI---ARKQGPVGLE-------------------K 98
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ +R + G + I + ++ + D L + +G+ PA G++
Sbjct: 99 VETNEPFLAKGIRFVADGYDLEF-IRDNLERDRDNFLMHLDEGSKIYRAIGDCAPAFGMI 157
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+++ N++ P LG + +L TL G +++ C P+ ++ L +
Sbjct: 158 GTLIGMVQMFANMTD-PSKLGPFMATALLATLYGALVANLFCLPIADKLHGKLLDEETNR 216
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 217 TLIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|220924427|ref|YP_002499729.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
gi|219949034|gb|ACL59426.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
Length = 292
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 98/264 (37%), Gaps = 27/264 (10%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGVSLLEIFGYKALGQ 72
+I GGN ++++ G ++ P VI + L F +++
Sbjct: 51 VIVLILIDGGNFAAYFDKHALIVIFGGATAATMLRFPFSVIVHGVPMGLRYAFTMRSVKP 110
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
D+++ + + ++K EN + DP F+ +R
Sbjct: 111 R---DLIEEITRIAEVVRKSGPMALENLEVSDP--------------------FLAQGVR 147
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
I G R + I + M+ + D L + G+ PA G++G ILG++ N+
Sbjct: 148 YIADGYDREF-IRDTMERDRDNFLMHLEEGSKVYRAFGDCAPAWGMIGTILGMVTMFANM 206
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
S P LG A+ +L TL G +++ + P+ ++ ++ +V ++ +
Sbjct: 207 SD-PSKLGPAMATALLATLYGALIANMIALPIADKLHVKLEEEDVSRSLVIDGILLIRDA 265
Query: 252 AIPQVAIEYGRKVLPLSERPSIEI 275
+ E LP + R
Sbjct: 266 KSASLVREMLIAYLPHNTREEFTA 289
>gi|254787124|ref|YP_003074553.1| flagellar motor protein PomA [Teredinibacter turnerae T7901]
gi|237686787|gb|ACR14051.1| chemotaxis protein MotA [Teredinibacter turnerae T7901]
Length = 253
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/277 (18%), Positives = 112/277 (40%), Gaps = 26/277 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ + I+ G + + +VIV G + + L +
Sbjct: 3 LATIVGMIGALALIVISMLMSG-ELGMFVNAPSLVIVVGGTIFAVMAKYGLGQFLGAVKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F K + D + L +KG E
Sbjct: 62 AGKSFSSKLPDPNMLIDEI---VALADEARKGGLLSLEG-------------------KE 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ F+ +++++ G+ ++ L+ + + + + M E PA+G++G
Sbjct: 100 VSSDFLQRGIQLLVDGH-DPDVVKTLLSIDKNKAMERHTVGASIFAAMAEMAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G +++ ++C P+ ++K ++ + +
Sbjct: 159 LIGLVAMLANMDD-PKAIGPAMAVALLTTLYGAVIANAMCGPMADKLKLRAGEEAMIKSL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
V AL+A G P+V R LP +R ++E
Sbjct: 218 VIDALLAIQGGQNPRVIDSMLRNYLPEGKR-TVEAAE 253
>gi|119385357|ref|YP_916413.1| flagellar motor protein [Paracoccus denitrificans PD1222]
gi|119375124|gb|ABL70717.1| flagellar motor protein [Paracoccus denitrificans PD1222]
Length = 166
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 126 ICDYMRMIIVGNARS----YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+C + + GN R Y++E ++ + I ++ E + HA+ +M ++LPA+GIV A+
Sbjct: 1 MCPFRCLDFQGNFRDCHSSYQVEEMLSQRIGLMNEETMHAPHALQNMADALPALGIVAAV 60
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+IK M ++ Q P++LG IG +L GT LG+ L+Y++ P ++ + + Y ++
Sbjct: 61 LGVIKTMSSIDQPPEVLGKMIGGALVGTFLGVFLAYAIVAPFAQRLGAVTKQDQAFYDVI 120
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
K L+A ++ + +E GR+ P RPS + + +
Sbjct: 121 KSVLVAGLHQHATNLCVEVGRQSAPDHVRPSFGDLENALRELKR 164
>gi|302338087|ref|YP_003803293.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
gi|301635272|gb|ADK80699.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
Length = 260
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 98/276 (35%), Gaps = 22/276 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI GL + + + G G I I I+IV G G +++NPL I
Sbjct: 3 IATIGGLILGVAMVAMGIIIGGVGVGIYIDIPSILIVLGGSFAGLMVSNPLPRILGVMKY 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + L ++
Sbjct: 63 VRHAIQVPNYEVEK---TITTLVNFSERARREGLLAL-----------------EDDIEE 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++++ G I++++ ++ + G PA G++G
Sbjct: 103 VEDEFLKNGIQLVVDGT-DPELIKSILYNDVGQLEERHAVGIKIFDDWGALTPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I + NL P +G+ + +L TL G L+ L P ++++ + I
Sbjct: 162 LIGLIAMLANLDD-PDAIGSGMATALITTLYGSFLANLLFIPFKNKLEDRDRAERLSRDI 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+ + +++ G P + L ++R + V
Sbjct: 221 MIEGILSIQAGDNPNILKYKLISFLEPAKRKEMLDV 256
>gi|313905137|ref|ZP_07838506.1| MotA/TolQ/ExbB proton channel [Eubacterium cellulosolvens 6]
gi|313470040|gb|EFR65373.1| MotA/TolQ/ExbB proton channel [Eubacterium cellulosolvens 6]
Length = 266
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 99/274 (36%), Gaps = 27/274 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G + I+ G ++IV G + G + P++++KD
Sbjct: 3 ITTILGWALAAFLIVNGITIP--KLGNFFDAPSLLIVVGGTIAGLIACYPIRILKDVPKH 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F K D + L ++ E +
Sbjct: 61 IGICFRGKGYDVPAVVDKI---VELAMVARQSGLLALEE------------------KAG 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E+T ++IV ++ +++ ++D ++ + PA G++G
Sbjct: 100 EITEPFFKAAVLMIVDANDPDKVRFVLERQLDDMMTRHEEAKGLYIKGSALAPAFGMIGT 159
Query: 181 ILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
++G++ + + LG +GV+L T G LS + +P+ ++ ++
Sbjct: 160 LVGLVNMLKGMDLSGGGGASTLGQDMGVALITTFYGSALSNVIFHPIAQKLSVRENEEVL 219
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + +I+ +G P+ E+ L ++
Sbjct: 220 YCSTIIEGVISIQSGENPKYIREHLLASLKTKQQ 253
>gi|75675429|ref|YP_317850.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74420299|gb|ABA04498.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
Length = 257
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 98/272 (36%), Gaps = 26/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFY-AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SG 58
M + G + I+ MGG+ ++ + ++I+ G + ++ PL I
Sbjct: 1 MDIMTGAGLAFGMIVIAMMVFMGGDLHMFVSEHAMIIIFGGSIAATMIRFPLGAILHGLP 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F L D L + + +K E +
Sbjct: 61 LGAKYAFTMSRLSARDLVDELARIAEI---SRKQGPVGLE-------------------K 98
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ +R + G + I + ++ + D L + +G+ PA G++
Sbjct: 99 VETTEPFLAKGVRFVADGYDLEF-IRDNLERDRDNFLMHLDEGSKIYRAIGDCAPAFGMI 157
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+++ N++ P LG + +L TL G +++ C P+ ++ L +
Sbjct: 158 GTLIGMVQMFANMTD-PSKLGPFMATALLATLYGALVANLFCLPIADKLHGKLLDEETNR 216
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 217 TLIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|221639653|ref|YP_002525915.1| chemotaxis protein motA [Rhodobacter sphaeroides KD131]
gi|221160434|gb|ACM01414.1| Chemotaxis protein motA [Rhodobacter sphaeroides KD131]
Length = 253
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 100/259 (38%), Gaps = 25/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ IGL I+ ++G GG + +VIV + PL V +
Sbjct: 3 IAAAIGLIGAIVMVVGSMIYAGG-VAPFVDIPSLVIVVAGTAFIVLAMKPLPVFLGHFKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++++F +V+ + L +K E
Sbjct: 62 MMKVFKPSRF---DTNEVISTMVDLSNLARKDGIMALEGR-------------------A 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F +++++ G + ++ + EI + A+ + PA+G+VG
Sbjct: 100 VPDPFFEKGLQLLVDGTDEAKLVKQ-LKYEIKAMKARHEAYQGAVKAWIDIGPAMGMVGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GN+S PK +G A+ V+L TL G +++ + P+ ++++ + +
Sbjct: 159 LIGLVLMLGNMSD-PKSIGPAMAVALLTTLYGALIANVIFAPILNKLEGYSNDEVTYREL 217
Query: 241 VKKALIAYMNGAIPQVAIE 259
V + L G ++ +
Sbjct: 218 VIEGLRGIARGESARMIED 236
>gi|146341586|ref|YP_001206634.1| putative chemotaxis protein MotA [Bradyrhizobium sp. ORS278]
gi|146194392|emb|CAL78417.1| putative chemotaxis protein MotA (Flagellar motor component)
[Bradyrhizobium sp. ORS278]
Length = 257
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 96/271 (35%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
+ T +GL +I +GG+ + I ++I+ G + ++ PL + +
Sbjct: 3 IMTSVGLVAG-GIVIATMMLLGGDVEMFISEHAVIIIFGGSIAATMIRFPLGAMLHGLPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
F L D L + + + E
Sbjct: 62 GAKFAFTMSRLSARDLVDELARIAEIARKQGPVGLEKVETD------------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + ++ + D L + +G+ PA G++G
Sbjct: 103 ---EPFLAKGIRYVADGYDLEF-IRDNLERDRDNFLMHLDEGSKIYRAIGDCAPAFGMIG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ N++ P LG + +L TL G +++ C P+ ++ L +
Sbjct: 159 TLIGMVQMFANMTD-PSKLGPFMATALLATLYGALVANLFCLPIADKLHGKLLDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 218 LIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|146282903|ref|YP_001173056.1| flagellar motor protein MotA [Pseudomonas stutzeri A1501]
gi|145571108|gb|ABP80214.1| flagellar motor protein MotA [Pseudomonas stutzeri A1501]
Length = 208
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 89/228 (39%), Gaps = 22/228 (9%)
Query: 38 AGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET 97
G LG ++ P+ V + IF + + ++ +K
Sbjct: 2 LGGTLGAVLLQTPIAVFMRAMSIGRWIFFPPRI---DLARGILMVTTWSNTARKEGLLGL 58
Query: 98 ENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE 157
E + E + +++++ G A I ++++ ++
Sbjct: 59 EP-----------------VAETEPDPYARKGLQLLVDG-AEPEVIRSILEVDLYTQEGR 100
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSY 217
L+ MG P IGI+GA++G+I MGNL+ P LG+ I V+ T+ G+ +
Sbjct: 101 DLRAAKVYESMGGYSPTIGIIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAFAN 159
Query: 218 SLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVL 265
L P+ +++KS +Q ++ + +++ G P+ + +
Sbjct: 160 LLVLPVGNKLKSIVQRQTAYREMLLEGVLSIAEGENPRSIEMKLQGFM 207
>gi|118475363|ref|YP_891434.1| flagellar motor protein MotA [Campylobacter fetus subsp. fetus
82-40]
gi|118414589|gb|ABK83009.1| flagellar motor protein [Campylobacter fetus subsp. fetus 82-40]
Length = 256
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 99/265 (37%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI G+ + I I G GGNP ++ ++IV + V A K +K +
Sbjct: 3 LSTIFGMVLAITSISVGDILEGGNPLHVLHISSVLIVIPTAMFSAVTATNKKYVKAAFKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + + +K E S+I
Sbjct: 63 LKVAFKGSGVDMSKR---IAEMVEYSTLARKNGILSLEQ-----KASSI----------- 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G E++ ++ I+ + H GES P G+VGA
Sbjct: 104 -DDEFLKTGLSMLVDGQPID-EVKENLELAIETTEEYYHECAHFWIKTGESCPTFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L P + I + T T+ GI+ +Y+ P +I + +
Sbjct: 162 VMGLMLALQ-LLDDPAAMAAGIAGAFTATVTGIMGAYAFFGPWGQKILGNAKDIIKEKTM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ +AL+ GA P+ L
Sbjct: 221 IIEALVGIAEGANPRSLESKLFNFL 245
>gi|85715413|ref|ZP_01046395.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85697834|gb|EAQ35709.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 257
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 98/272 (36%), Gaps = 26/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFY-AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SG 58
M + G +T I+ MGG+ ++ + ++I+ G ++ PL I
Sbjct: 1 MDIMTGAGLTFGMIVIAMMVFMGGDLHMFVSEHAMIIIFGGATAATMIRFPLGAILHGLP 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ F L D L + + +K E +
Sbjct: 61 LGAKYAFTMSRLSARDLVDELARIAEI---ARKQGPVGLE-------------------K 98
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ +R + G + I + ++ + D L + +G+ PA G++
Sbjct: 99 VETNEPFLAKGIRFVADGYDLEF-IRDNLERDRDNFLMHLDEGSKIYRAIGDCAPAFGMI 157
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+++ N++ P LG + +L TL G +++ C P+ ++ L +
Sbjct: 158 GTLIGMVQMFANMTD-PSKLGPFMATALLATLYGALVANLFCLPIADKLHGKLLDEETNR 216
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 217 TLIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|229525507|ref|ZP_04414912.1| Flagellar motor rotation protein MotA [Vibrio cholerae bv. albensis
VL426]
gi|262191490|ref|ZP_06049675.1| Flagellar motor rotation protein MotA [Vibrio cholerae CT 5369-93]
gi|229339088|gb|EEO04105.1| Flagellar motor rotation protein MotA [Vibrio cholerae bv. albensis
VL426]
gi|262032638|gb|EEY51191.1| Flagellar motor rotation protein MotA [Vibrio cholerae CT 5369-93]
Length = 254
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 113/270 (41%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++GL + ++ GG+ + + ++IV G + +M + +
Sbjct: 3 LATLVGLIGGMAFVVMAMIL-GGSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAAKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +KA D D++ + + +KG E E
Sbjct: 62 AGKAFMFKA---DVPEDLIAKIVEMADAARKGGFLALE-------------------EME 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + + + ++I + K G+ PA+G++G
Sbjct: 100 IPNAFMQKGIDLLVDGH-DADVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G ILS + P+ ++ R ++ +
Sbjct: 159 LVGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAILSNMVFFPIADKLALRRDQETLNRRL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A +G P+V Y + L S+R
Sbjct: 218 IMDGVLAIQDGQNPRVIDSYLKNYLNASKR 247
>gi|78485865|ref|YP_391790.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78364151|gb|ABB42116.1| MotA/TolQ/ExbB family protein [Thiomicrospira crunogena XCL-2]
Length = 255
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 25/275 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST IGLF+ I +I AMG + I + ++IV G + ++ K +
Sbjct: 4 STFIGLFLGISIVITAM-AMGSSILIFVNIPGLMIVLGGTIAATMIRYSFKETLHAIGMS 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+I +D +++ L L+ +K + +
Sbjct: 63 FQIVLPSNDIKD-KNELVDLTEDLLRLSRKDGFLVLD-------------------KQEV 102
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F +RM++ G ++ ++LM+E + + S +G + PA G++G +
Sbjct: 103 NHGFYRHGVRMLVDGYSKEVIKQSLMEEN-KLFVERATTSAGVFSSIGGAAPAFGMIGTL 161
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I+ + NLS P +G A+ V++ TL G +++ P+ +I ++ ++
Sbjct: 162 VGLIQMLSNLSD-PSSIGPAMAVAMLTTLYGAMIANLFALPMADKINIWVQEESVRQFMI 220
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+ L+A G P + E L +PS E V
Sbjct: 221 IEGLMAISEGRNPGMMRELLSPYL--ENKPSAEEV 253
>gi|71279500|ref|YP_267836.1| flagellar motor protein PomA [Colwellia psychrerythraea 34H]
gi|71145240|gb|AAZ25713.1| sodium-driven polar flagellar protein [Colwellia psychrerythraea
34H]
Length = 254
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 107/271 (39%), Gaps = 25/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ I ++ G + + ++IV + + L G
Sbjct: 3 LATLIGILGAIGLLVMAMVLSG-DIMMFADTQSVLIVFCGSIFIVLSNYNLGQFFGIGKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + F +K + ++++ + +KG E
Sbjct: 62 IGKAFMFKLEKPE---ELIEKAVDMADAARKGGFLALEEA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G+ + + + ++I++ + + + PA+G++G
Sbjct: 100 ITNPFMQKGVDMLVDGH-DADVVRATLQKDINLTTERHETGSDMMMALADVAPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ PK +G A+ V+L TL G L+ + P+ S++K ++ +
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAFLANVIAIPIASKLKLRMAEEKMNQEL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
V A++ +G P+V + L +R
Sbjct: 218 VLDAVLGIQDGQNPRVIEGLLKNYLAEGKRK 248
>gi|118588412|ref|ZP_01545821.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118439118|gb|EAV45750.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 255
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 55/279 (19%), Positives = 105/279 (37%), Gaps = 28/279 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV- 59
++T+IG+ + + GG+ I ++IV G GL ++ L I + V
Sbjct: 3 LATLIGIVGAFGIVTTAIFL-GGSFGQFIDVPSVLIVVGGGLAATLIRFQLSDIAAAFVT 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLE 118
K D++ + L ++K EN + DP
Sbjct: 62 GFKVALAGKNANPR---DLITEISNLGEIVRKSGPLGLENVDVSDPV------------- 105
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ++ I G + I M+ E D+ L + +G+S PA G++
Sbjct: 106 -------LAKGVQYIADGYELEF-IRESMERERDLQLSRLSEGKRVFKALGDSAPAFGMI 157
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+++ + N+ P +G ++ V+L TL G ++S LC PL ++ +
Sbjct: 158 GTLVGLVQMLANMDD-PAAIGPSMAVALLTTLYGALISNILCLPLVDKLDAKFDVDDLNQ 216
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
++ + P + E LP R + A
Sbjct: 217 TLIIDGVCQIRESKSPALIKEMLIAYLPDKLRAELADAA 255
>gi|77463801|ref|YP_353305.1| flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126462637|ref|YP_001043751.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|77388219|gb|ABA79404.1| Flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126104301|gb|ABN76979.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
Length = 253
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 101/259 (38%), Gaps = 25/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ IGL I+ ++G GG + +VIV + PL V +
Sbjct: 3 IAAAIGLIGAIVMVVGSMIYAGG-VAPFVDIPSLVIVVAGTAFIVLAMKPLPVFLGHFKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++++F + +V+ + L +K E
Sbjct: 62 MMKVFKPSRFDMN---EVISTMVELSNLARKDGIMALEGR-------------------A 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F +++++ G + ++ + EI + A+ + PA+G+VG
Sbjct: 100 VPDPFFEKGLQLLVDGTDEAKLVKQ-LKYEIKAMKARHEAYQGAVKAWIDIGPAMGMVGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GN+S PK +G A+ V+L TL G +++ + P+ ++++ + +
Sbjct: 159 LIGLVLMLGNMSD-PKSIGPAMAVALLTTLYGALIANVIFAPILNKLEGYSNDEVTYREL 217
Query: 241 VKKALIAYMNGAIPQVAIE 259
V + L G ++ +
Sbjct: 218 VIEGLRGIARGESARMIED 236
>gi|94986929|ref|YP_594862.1| flagellar motor component [Lawsonia intracellularis PHE/MN1-00]
gi|94731178|emb|CAJ54540.1| Flagellar motor component [Lawsonia intracellularis PHE/MN1-00]
Length = 250
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 104/270 (38%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T++G+ ++ + G P I ++IV G +++ P + ++ + +
Sbjct: 3 IATLLGIVFGFTLVLVAIFI-GPVPGKFIHVPSMIIVFGGVSASILISFPFEDVRQAISA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ F K DV+ + + ++ E
Sbjct: 62 GVKAFSSKKTKAS---DVVTTMVKIAEISRREGTLALERI-------------------- 98
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +I NA I + + EI + + +G A G++G
Sbjct: 99 QTDNPLLKKATQLIADNADPSLIHDTVAIEIASLKRRHKVGINVFQKLGYLGLAFGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + ++ P LG + V++ T G I++ + P+ ++K+ L++ + I
Sbjct: 159 LIGLVQMLATMND-PSELGEGMAVAILTTFYGSIIANLVFIPIADKLKAKSLQEELILFI 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + + + P++ E LP ER
Sbjct: 218 IFEGAKSILENNNPKLVYEKLSSFLPPKER 247
>gi|296126060|ref|YP_003633312.1| MotA/TolQ/ExbB proton channel [Brachyspira murdochii DSM 12563]
gi|296017876|gb|ADG71113.1| MotA/TolQ/ExbB proton channel [Brachyspira murdochii DSM 12563]
Length = 263
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 38/254 (14%), Positives = 98/254 (38%), Gaps = 23/254 (9%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLY 83
+ + I++ AG G +MAN + + ++ + A +D ++ L
Sbjct: 26 SLGNFLDIASIIVTAGGGANSLIMANDIGTVIGVPKAIKVLLQKPAYSED---QIIITLI 82
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
++ E+ I F+ M++++ G +
Sbjct: 83 SFSEKARREGLLVLEDDI-----------------QEVSDPFLKKGMQLVVDGT-DPELV 124
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP--KILGTA 201
+N+++ EID I PA G++G ++G++ + +L + +G+
Sbjct: 125 KNILNTEIDNIEARHDSVRKVFDDAASLFPAWGMIGTLIGLVIMLRSLGGGGGLETIGSG 184
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+ V+L T G +++ P++ ++ + + + I+ + +++ G P++ +
Sbjct: 185 MAVALITTYYGSVIANGFALPISGRLAARHSSEAMVKSIMLEGILSIQAGDNPRIVKDKL 244
Query: 262 RKVLPLSERPSIEI 275
LP ++R +
Sbjct: 245 VSFLPPAQRQKVNE 258
>gi|148254924|ref|YP_001239509.1| putative chemotaxis protein MotA (flagellar motor component)
[Bradyrhizobium sp. BTAi1]
gi|146407097|gb|ABQ35603.1| putative chemotaxis protein MotA (Flagellar motor component)
[Bradyrhizobium sp. BTAi1]
Length = 257
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 99/271 (36%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGV 59
+ T GL ++ +I +GG+ + + +I+ G + ++ PL V+ +
Sbjct: 3 IMTTAGLVAGVI-VIATMMLLGGDLEMFVSEHAAIIIFGGSISATMIRFPLGVMLHGIPL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+ F L D L + + + E
Sbjct: 62 GMKFAFTMSRLSARELVDELARIAEIARKQGPVGLEKVETD------------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R + G + I + ++ + D L + +G+ PA G+VG
Sbjct: 103 ---EPFLAKGIRYVADGYDLEF-IRDNLERDRDNFLMHLDEGSKIYRAIGDCAPAFGMVG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ N++ P LG + +L TL G ++S +C P+ ++ L +
Sbjct: 159 TLIGMVQMFANMTD-PSKLGPFMATALLATLYGALVSNLICLPIADKLHGKLLDEETNRT 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ + P + E LP R
Sbjct: 218 LIIDGILMIRDSKSPALVREMLLAYLPEKHR 248
>gi|260776527|ref|ZP_05885422.1| Flagellar motor rotation protein MotA [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607750|gb|EEX34015.1| Flagellar motor rotation protein MotA [Vibrio coralliilyticus ATCC
BAA-450]
Length = 228
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 96/245 (39%), Gaps = 24/245 (9%)
Query: 26 YILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYIL 85
+ + I+IV G +M + + + F +K D D++ + +
Sbjct: 1 MMFVDVTSILIVVGGSTFVVLMKFTMGQFFGAAKIAGKAFMFKV---DEPEDLIAKVVEM 57
Query: 86 MYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN 145
+KG E E F+ + +++ G+ + +
Sbjct: 58 ADAARKGGFLALE-------------------EMEITNNFMQKGIDLLVDGH-DADVVRA 97
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVS 205
+ ++I + G+ PA+G++G ++G++ + N+ PK +G A+ V+
Sbjct: 98 ALQKDIVLTDERHDFGASVFRAFGDVAPAMGMIGTLVGLVAMLSNMDD-PKAIGPAMAVA 156
Query: 206 LTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVL 265
L TL G ILS + P+ ++ R ++ ++ ++A +G P+V Y + L
Sbjct: 157 LLTTLYGAILSNMVFFPIADKLSLRRDQEKLNRRLIMDGVLAIQDGQNPRVIDSYLKNYL 216
Query: 266 PLSER 270
+R
Sbjct: 217 NEGKR 221
>gi|330830901|ref|YP_004393853.1| chemotaxis protein PomA [Aeromonas veronii B565]
gi|328806037|gb|AEB51236.1| Chemotaxis protein PomA [Aeromonas veronii B565]
Length = 252
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 109/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++IG+ + ++ G GG + + + I + +M L +
Sbjct: 3 LGSLIGIVLGFGVVVYGMLL-GGPMSMYVDMPSVYITVLGSIFIAMMKFNLGQFLMAFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F YK D D++ L +KG E
Sbjct: 62 AGKAFMYKG---DKLEDLITKAVELADAARKGGFLALEAA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G+ + + +M+++ID+ + +G+ PA+G++G
Sbjct: 100 IPNAFMKKGIDMLVDGH-DAEVVRAVMEKDIDLTAERHVIAIKVFRTLGDLGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G A+ V+L TL G I + L P+ +++ ++ +
Sbjct: 159 LVGLVAMLANMSD-PKSIGPAMAVALLTTLYGAIEANMLAIPIADKLELRSGEEKLSRTL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ A++ +G P+V + L S+R
Sbjct: 218 ILDAIMGIQDGQNPRVIQSMLQNYLNQSKR 247
>gi|323697551|ref|ZP_08109463.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323457483|gb|EGB13348.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 251
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 110/272 (40%), Gaps = 25/272 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++GL + + +I G +GG + I ++IV G L ++A P + I + +
Sbjct: 3 IVTLLGLAVGL-SLIIGAIIIGGAVDVFINVPGMMIVVGGTLASILVAFPFEEIIQAFKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++F + + DV+ ++ + ++ E N
Sbjct: 62 AFKMFVGR---KSRVRDVVNIMVKVAEISRREGLIALE--------------------NV 98
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + +I NA I + EI+ + + P+ G++G
Sbjct: 99 QTENMVLKKSCQLIADNADPALIRTTLSIEINSMRRRHQVAQDVFKRLAALAPSFGMMGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ + LS PK +G A+ V++ T G +S P+ +++K+ L++ +
Sbjct: 159 LIGLVQMLSQLSD-PKAIGPAMAVAILTTFYGSAMSTLFFIPIAAKLKARTLQEQLHLEV 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPS 272
+ + + + P++ E L +ER +
Sbjct: 218 IFEGAKSILENNNPRLVYEKLSSFLAPAERET 249
>gi|326796444|ref|YP_004314264.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326547208|gb|ADZ92428.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 245
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 22/254 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
TI GL + + + GG +L+ +IV +G +M + +K D+ L
Sbjct: 4 LTIGGLLVAFCSVFLANWLGGGEVILLLNLPSAIIVIVGSMGATLMQSRVKDALDAAKLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ ++ L ++ S + I NS
Sbjct: 64 KWSLFPPSYDLQKARLLVGTLS---NKARRLSLVSLDADIAALGNS-------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F ++M I G E L DE I I + + +G P +GI+G++
Sbjct: 107 ---FATRALQMAIDGADPDMLYERLHDEAIRIRDKRQSSIS-FLESVGGYAPTLGIMGSV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
LG+I+AM NL SP+ LG I V+ TL G + + P+ ++ + ++ ++
Sbjct: 163 LGLIQAMANL-DSPEALGHGIAVAFVSTLYGQGFANLVVFPIAKKLSNYCDQELLYNQLL 221
Query: 242 KKALIAYMNGAIPQ 255
+ G PQ
Sbjct: 222 IDGVHGIAIGKHPQ 235
>gi|326795347|ref|YP_004313167.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326546111|gb|ADZ91331.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 255
Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 100/271 (36%), Gaps = 26/271 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++ IG+ + II + + I + I+IV G + ++ KD+ +
Sbjct: 4 ASFIGIISGLALIISAIFLGSSDIAIFLNIPGIMIVIGGTIAATLVTF---QFKDTMSAF 60
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLENN 120
F + + ++ + + ++ D P
Sbjct: 61 RAAFIVFSQDKQNPQAMIATMLQITKIARREGLVALSRVDADSP---------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ M M + Y I + +ID + MG PA G++G
Sbjct: 105 ----FLKRAMNMASDASDEDY-IRKTLQADIDSLKMRHYVIQDVFKKMGLYAPAFGMLGT 159
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + L +P+ +G ++ V+L T G +LS + NP+ ++K+ + + + I
Sbjct: 160 LIGLIQMLAQL-DNPESIGPSMAVALLTTFYGSLLSTVIFNPIAGKLKARTILEIQTLEI 218
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
++ ++ + E +P +R
Sbjct: 219 IRDGTVSLLGSNNYLAVYERLSSYVPAHQRK 249
>gi|89093919|ref|ZP_01166864.1| chemotaxis protein MotA [Oceanospirillum sp. MED92]
gi|89081805|gb|EAR61032.1| chemotaxis protein MotA [Oceanospirillum sp. MED92]
Length = 258
Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 106/273 (38%), Gaps = 25/273 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++++G+ + II GG+ + + ++IVAG + ++ K + ++
Sbjct: 4 ASLLGIISGLALIISAIIM-GGSADVFVNVPGMMIVAGGTIAATLLTVQFKDVLNAFKGA 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F D + L + + L + E
Sbjct: 63 FIVFTQDKTNPQEMIDT---MLELSRVSHRHGLLK--------------------LGDVE 99
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ + M++ A I N + EID ++ M PA G++G +
Sbjct: 100 SSSPVLKRACMLLAEAASEQVIRNTIQNEIDSLVARHHSVQDVFRKMAAYAPAFGMLGTL 159
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I+ + L +P+ +G A+ ++L T G +L+ + P+ ++KS L + I+
Sbjct: 160 IGLIQMLSEL-DNPETIGPAMAIALLTTFYGSLLATMVFLPIAGKLKSRTLLEVTNLEII 218
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ I+ + E +P ++R I+
Sbjct: 219 REGCISILTNDHYMHVYEQLSSYIPAAQRKKIK 251
>gi|222824333|ref|YP_002575907.1| flagellar motor component MotA [Campylobacter lari RM2100]
gi|222539554|gb|ACM64655.1| flagellar motor component MotA [Campylobacter lari RM2100]
Length = 257
Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 108/269 (40%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + ++ I G GGNP ++ +IV + A K +K +
Sbjct: 3 LSTILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F + + L ++ E+ ++ N
Sbjct: 63 LKLAFKGAGVN---LSQRIAELVEYSVIARRDGLLALESKTNEIDN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M M++ G + E++ + ++ Y K GE+ P +G+VGA
Sbjct: 106 ---EFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKEC-AEYWIRFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L P+ + I + T T+ GI +Y+L P +IK+ + + I+
Sbjct: 162 VMGLMLALQ-LLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ A+++ GA P+ L E
Sbjct: 221 ISHAIVSIAEGANPRDLEAKLFNYLGQGE 249
>gi|32266000|ref|NP_860032.1| flagellar motor protein MotA [Helicobacter hepaticus ATCC 51449]
gi|32262049|gb|AAP77098.1| flagellar motor component MotA [Helicobacter hepaticus ATCC 51449]
Length = 256
Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 23/277 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI GL I+ + G + GGNP LI ++I+ + A IK +
Sbjct: 3 ITTIGGLIGAIISLCVGDFLEGGNPLHLIHISSLIIIIPTAMCAASSATHATHIKGAMKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +FG + + ++++ L L +K E +
Sbjct: 63 LKIVFGSTGVNLN---EIIRQLVELATLARKDGVLALEGKAAQIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + MII G ++ + M+ +I+ + H E+ P +G+VGA
Sbjct: 106 ---DFLRQSLSMIIDGR-DAHAVREDMEVQIESLEEYYKGCSHFWILYAETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ A+ L PK + I + T T+ GI SY+L P ++ S R ++
Sbjct: 162 VMGLMLALQ-LLDDPKAMAAGIAGAFTATVTGIFCSYALFGPWGHKMHSKSADIIRGRMV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
V + ++ NG P+ E +P E P I
Sbjct: 221 VLEGVVGIANGDNPRNLEEKLLGFIPPGE-PKISQFE 256
>gi|83311657|ref|YP_421921.1| flagellar motor component [Magnetospirillum magneticum AMB-1]
gi|82946498|dbj|BAE51362.1| Flagellar motor component [Magnetospirillum magneticum AMB-1]
Length = 272
Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 106/268 (39%), Gaps = 16/268 (5%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ST+IG +++L I+G + N I + +++V G L + ++ ++ + +
Sbjct: 10 LSTVIGFTLSLLLIVGSIIELTTNFKIFLHLSGLLMVIGGTLAAAHVGFEMRYVRQALGN 69
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF + + + + + Y L+K E+ + + F +
Sbjct: 70 IKAIFFSPKMARGMLTNEVARVIRWGYLLQKSGIQALESDVKSLKSQDAFLAY------- 122
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +++ G E+ +++D +++ + +M + PA G++
Sbjct: 123 --------GVGLVVSGYTGP-EVRHMLDNQVETAFQRHTVSVEILKYMASNAPAFGMMAT 173
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+ P LG + V L GTL G++ + + P + ++
Sbjct: 174 LVGLVVMLDNMGDDPSKLGGGMAVGLLGTLYGVLFARLVLMPAAEKAHQRESIIRFRNML 233
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLS 268
V + L+ P+ + L +
Sbjct: 234 VAEGLVMLAERRSPRFIQDAMNSYLDPA 261
>gi|213054485|gb|ACJ39421.1| PomA2 [Aeromonas hydrophila]
Length = 252
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 109/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++IG+ + ++ G GG + + + I L +M + +
Sbjct: 3 LGSLIGIVLGFGVVVYGMLL-GGPMSMYVDMPSVYITILGSLFICMMKFNIGQFLMAFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F YK D D++ L +KG E
Sbjct: 62 AGKAFIYKGDKLD---DLIIKAVELADAARKGGFLALEAA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M++ G+ + I +M+++I++ + +G+ PA+G++G
Sbjct: 100 VPNAFMKKGIDMLVDGH-DADVIRGVMEKDIELTAERHVIAIKVFRSLGDLGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G A+ V+L TL G I + + P+ +++ ++ +
Sbjct: 159 LVGLVAMLANMSD-PKSIGPAMAVALLTTLYGAIEANMIAIPIADKLELRSGEEQLSRCL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V A++ +G P+V + L S+R
Sbjct: 218 VLDAIMGIQDGQNPRVIQSMLQNYLNQSKR 247
>gi|254500652|ref|ZP_05112803.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
gi|222436723|gb|EEE43402.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
Length = 255
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 109/279 (39%), Gaps = 28/279 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV- 59
++T++G+ +I + GG+ + ++IV G GL ++ + I +
Sbjct: 3 LATLLGIVGAFAIVITAIFL-GGSFGQFVDVPSMLIVIGGGLAATLIRFQVSDIAAAFAT 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLE 118
+ K+ D++ + L ++K EN + DP
Sbjct: 62 AFKVALSGKSASPR---DLISEITNLGEIVRKSGPLGLENVDVSDPV------------- 105
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
+ ++ I G + I+ M+ E D+ L + + +G+S PA G++
Sbjct: 106 -------LAKGVQYIADGYELEF-IKEAMERERDLQLSRLSEGKRVMKALGDSAPAFGMI 157
Query: 179 GAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
G ++G+++ + N+ P +G ++ V+L TL G ++S LC P+ ++ +
Sbjct: 158 GTLVGLVQMLANMDD-PAAIGPSMAVALLTTLYGALISNILCLPMVDKLDAKFDVDELNQ 216
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
++ + P + E LP R + A
Sbjct: 217 TLIIDGVCQIRESKSPALIKEMLVAYLPEKARADLAEAA 255
>gi|152965626|ref|YP_001361410.1| MotA/TolQ/ExbB proton channel [Kineococcus radiotolerans SRS30216]
gi|151360143|gb|ABS03146.1| MotA/TolQ/ExbB proton channel [Kineococcus radiotolerans SRS30216]
Length = 257
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 98/266 (36%), Gaps = 22/266 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+ I GL +T+ ++ GG+ ++ +V+V +G VM LK + +
Sbjct: 4 AFIGGLVVTVAAVLWTQNHEGGSLTDILLVGPLVLVIIGTIGVGVMGGTLKDAAGTIKQV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ F K + + + + ++ E+ I + +
Sbjct: 64 KKAFLGKPKNA---GETVGTIVKMAERARREGLLALEDAIKEVDD--------------- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + ++ I G E+ ++ +I + MG P++GI G +
Sbjct: 106 --EFLRNGLQTAIDGT-DPDELYEILTAQIQAKKAADKQGAKIFGDMGGYAPSVGICGTV 162
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+ + + NLS LG I + T G+ + L P+ S++ + +V
Sbjct: 163 ISLTVVLANLSD-AAALGPMIAGAFVATFWGVASANILYLPMQSRLTRLSALETAQMELV 221
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPL 267
+ ++A G+ P+ + +LP
Sbjct: 222 VEGILAIQAGSNPRSVAKKLESLLPP 247
>gi|332558676|ref|ZP_08412998.1| MotA [Rhodobacter sphaeroides WS8N]
gi|3024167|sp|Q53174|MOTA_RHOSH RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|758646|emb|CAA59974.1| MotA [Rhodobacter sphaeroides]
gi|332276388|gb|EGJ21703.1| MotA [Rhodobacter sphaeroides WS8N]
gi|1586756|prf||2204359A motA gene
Length = 253
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 101/259 (38%), Gaps = 25/259 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ IGL I+ ++G GG + +VIV + PL V +
Sbjct: 3 IAAAIGLIGAIVMVVGSMIYAGG-VAPFVDIPSLVIVVAGTAFIVLAMKPLPVFLGHFKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++++F + +V+ + L +K E
Sbjct: 62 MMKVFKPSRFDMN---EVISTMVELSNLARKDGIMALEG-------------------KA 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F +++++ G + ++ + EI + A+ + PA+G+VG
Sbjct: 100 VPDAFFEKGLQLLVDGTDEAKLVKQ-LKYEIKAMKARHEAYQGAVKAWIDIGPAMGMVGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ +GN+S PK +G A+ V+L TL G +++ + P+ ++++ + +
Sbjct: 159 LIGLVLMLGNMSD-PKSIGPAMAVALLTTLYGALMANVIFAPILNKLEGYSADEVTYREL 217
Query: 241 VKKALIAYMNGAIPQVAIE 259
V + L G ++ +
Sbjct: 218 VIEGLRGIARGESARMIED 236
>gi|144899935|emb|CAM76799.1| MotA/TolQ/ExbB proton channel [Magnetospirillum gryphiswaldense
MSR-1]
Length = 266
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 92/268 (34%), Gaps = 16/268 (5%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG I+ +G N I ++V G ++ + + +
Sbjct: 3 LATLIGFVAGIILFLGSIVIATDNYLAFIDFPSFLMVVGGTFASTFISYEPRYVMQAFRL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ IF + + + Y ++K N E F
Sbjct: 63 MTSIFFAPKIQRGVLQGEVGRCIRWGYLIQKTGLNALEADTVKLKKQDRFLGF------- 115
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ ++I G E+ ++ I+ P + +M + PA G++G
Sbjct: 116 --------GVDLVIAGYTGP-EVRQILTNSIETSFQRNCVPADILRNMAGTAPAYGMIGT 166
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I +G + P LG + V+L TL G++L + P S+I+ +
Sbjct: 167 LIGLIIMLGQMGSDPAALGPGMAVALITTLYGVLLPRLMLLPAASKIQQREEIVRFRNYL 226
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLS 268
V + L P+ + L S
Sbjct: 227 VAEGLCLLAERKNPRFIQDAMNSFLDPS 254
>gi|188996770|ref|YP_001931021.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931837|gb|ACD66467.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
Length = 253
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 22/261 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI G+ ++ G GGNP L+ I+IV L +A K + +
Sbjct: 3 ITTIGGIIAALVLFAVGDIMEGGNPAGLVHISSIIIVVPTTLSAAAVATKQKYVAAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +FG L + + L+ + + +K E+ I + +
Sbjct: 63 LKIVFGNPQLNPE---ETLEQIIKIAEKARKEGILAIESDIGNIDD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F ++M++ G I M+ EI I GE+ P G+VGA
Sbjct: 106 ---PFFRKGLQMLVDG-LEPEVIRERMELEIGEIEEYYEGAAKYWITAGETTPVFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+ L ++P + I + T T+ GI+ SY L P ++K+ + +
Sbjct: 162 VMGLILALKRL-ENPVEMAEGIAGAFTATVTGIVSSYLLFGPWGHKMKAKAKDIIKTREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYG 261
+ + +I P++ E
Sbjct: 221 ILEGIIGIALSKNPKMLREQL 241
>gi|145298031|ref|YP_001140872.1| flagellar motor protein PomA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850803|gb|ABO89124.1| Flagellar motor protein PomA [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 252
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ ++IG+ + ++ G GG + I + I + +M + +
Sbjct: 3 LGSLIGIVLGFGVVVYGMLL-GGPMSMYIDMPSVYITILGSIFIAMMKFNIGQFLMAFKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F YK D D++ L +KG E
Sbjct: 62 AGKAFLYKGDKLD---DLIIKAVELADAARKGGFLALEAA-------------------E 99
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
TF+ + M++ G+ + I +++++I++ + +G+ PA+G++G
Sbjct: 100 VPNTFMKKGIDMLVDGH-DADVIRAVLEKDIELTAERHVIAIKVFRALGDLGPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S PK +G A+ V+L TL G I + + P+ +++ ++ +
Sbjct: 159 LVGLVAMLANMSD-PKSIGPAMAVALLTTLYGAIEANMIAIPIADKLELRSGEEQLSRCL 217
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
V A++ +G P+V + L S+R
Sbjct: 218 VLDAIMGIQDGQNPRVIQSMLQNYLNQSKR 247
>gi|163854226|ref|YP_001642269.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
gi|163665831|gb|ABY33198.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
Length = 272
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 100/265 (37%), Gaps = 30/265 (11%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGVSLLEIFGYKALGQDTYC 76
GGN ++++ G + ++ P + + L F +++
Sbjct: 35 IMIDGGNFAAYFDKHAVIVIFGGAIAATMIRFPFSTMLHGLPMGLRYAFTMRSVKPH--- 91
Query: 77 DVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
++++ + + ++K EN I DP F+ R I
Sbjct: 92 ELIEEITKIADVVRKSGPIALENMEISDP--------------------FLAQGARYIAD 131
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
G R + I + M+ + D L + G+ PA G++G ILG++ N+S P
Sbjct: 132 GYDRDF-IRDTMERDRDNFLMHLDEGSKIYRAFGDCAPAWGMIGTILGMVTMFANMSD-P 189
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
LG A+ +L TL G +++ + P+ ++ ++ ++ ++ + P
Sbjct: 190 SKLGPAMATALLATLYGALIANMITLPIADKLHVKLEEEDVSRSLIIDGILLIRDQKSPS 249
Query: 256 VAIEYGRKVLPLSERPSIEIVAQEV 280
+ E LP + R E +A E
Sbjct: 250 LVREMLIAYLPANHR---EELAAEA 271
>gi|77361279|ref|YP_340854.1| flagellar motor protein PomA [Pseudoalteromonas haloplanktis
TAC125]
gi|76876190|emb|CAI87412.1| Flagellar motor component (Chemotaxis motA protein)
[Pseudoalteromonas haloplanktis TAC125]
Length = 228
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 98/247 (39%), Gaps = 24/247 (9%)
Query: 25 PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYI 84
+ +VIV G L + + G + + F +K + ++++
Sbjct: 1 MAMFYNTPSVVIVFGGSLFIVLSNFTMSQFFGIGKVVTKAFMFKLESPE---ELIEKAVE 57
Query: 85 LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIE 144
L + +KG E F+ + M++ G+ + +
Sbjct: 58 LADSARKGGFLALEEA-------------------EIPNPFMRKGVDMLVDGH-DADVVR 97
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
+ ++I + +G+ PA+G++G ++G++ + N+ PK +G A+ V
Sbjct: 98 ATLQKDISLTTARHESGATLFKSLGDIAPAMGMIGTLIGLVAMLSNMDD-PKAIGPAMAV 156
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKV 264
+L TL G L+ + P+ ++++ + ++ ++ A++ +G P+V +
Sbjct: 157 ALLTTLYGAFLANVVAIPIQTKLELRKDEEAMNQRLILDAVLGIQDGQNPKVIEGILKNY 216
Query: 265 LPLSERP 271
L S+R
Sbjct: 217 LAESKRK 223
>gi|328542462|ref|YP_004302571.1| MotA/TolQ/ExbB proton channel [polymorphum gilvum SL003B-26A1]
gi|326412209|gb|ADZ69272.1| MotA/TolQ/ExbB proton channel [Polymorphum gilvum SL003B-26A1]
Length = 246
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 108/271 (39%), Gaps = 27/271 (9%)
Query: 9 ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI-FGY 67
+ C++ +GG+ + I+IV G G+ ++ PL I + ++ F
Sbjct: 1 MGAFCVVLVAIFLGGSFTQFVDIPSILIVVGGGMAATLVRFPLAGIGSAFAVGGKVAFSG 60
Query: 68 KALGQDTYCDVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLENNELTTFI 126
K + D+++ + L ++K EN + DP +
Sbjct: 61 KTIKPR---DLIEEISHLGEIVRKSGPLGLENVDVSDPT--------------------L 97
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
++ I G + I M+ E D+ L + +G+S PA G++G ++G+++
Sbjct: 98 AKGVQYIADGYEIDF-IRESMERERDLTLTRLSEGKRVFKALGDSAPAFGMIGTLVGLVQ 156
Query: 187 AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
+ N+ P +G ++ V+L TL G ++S +C P+ ++ + + ++ ++
Sbjct: 157 MLANMDD-PSAIGPSMAVALLTTLYGALISNVVCLPIVDKLDAKFDVEELNQTLIIDGIL 215
Query: 247 AYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
P + E LP R + A
Sbjct: 216 QIRESKSPALIREMLIAYLPEKSRAGLVDAA 246
>gi|218533171|ref|YP_002423987.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240141686|ref|YP_002966166.1| putative chemotaxis protein (flagellar motor component)
[Methylobacterium extorquens AM1]
gi|254564194|ref|YP_003071289.1| chemotaxis protein [Methylobacterium extorquens DM4]
gi|218525474|gb|ACK86059.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240011663|gb|ACS42889.1| putative chemotaxis protein (flagellar motor component)
[Methylobacterium extorquens AM1]
gi|254271472|emb|CAX27487.1| putative chemotaxis protein (flagellar motor component)
[Methylobacterium extorquens DM4]
Length = 257
Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 100/265 (37%), Gaps = 30/265 (11%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGVSLLEIFGYKALGQDTYC 76
GGN ++++ G + ++ P + + L F +++
Sbjct: 20 IMIDGGNFAAYFDKHAVIVIFGGAIAATMIRFPFSTMLHGLPMGLRYAFTMRSVKPH--- 76
Query: 77 DVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
++++ + + ++K EN I DP F+ R I
Sbjct: 77 ELIEEITKIADVVRKSGPIALENMEISDP--------------------FLAQGARYIAD 116
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
G R + I + M+ + D L + G+ PA G++G ILG++ N+S P
Sbjct: 117 GYDRDF-IRDTMERDRDNFLMHLDEGSKIYRAFGDCAPAWGMIGTILGMVTMFANMSD-P 174
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
LG A+ +L TL G +++ + P+ ++ ++ ++ ++ + P
Sbjct: 175 SKLGPAMATALLATLYGALIANMITLPIADKLHVKLEEEDVSRSLIIDGILLIRDQKSPS 234
Query: 256 VAIEYGRKVLPLSERPSIEIVAQEV 280
+ E LP + R E +A E
Sbjct: 235 LVREMLIAYLPANHR---EELAAEA 256
>gi|83591880|ref|YP_425632.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83574794|gb|ABC21345.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 272
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 101/270 (37%), Gaps = 21/270 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+ G+ + I+ GG+P I+IV L V + +K I +
Sbjct: 19 LATVAGIGGALALIVTALVL-GGSPRAFFDLPSILIVVLGTLAVTVASFTVKDIGVTVAM 77
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + L S I +LE+
Sbjct: 78 LRPALTQSTRPPRAAALKILALADFCRK------------------SGILKIQGPILESL 119
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ M +++ G ++E ++ ++I + + E PA+G++G
Sbjct: 120 RDEPFLHKGMGLVVDGLPEP-DVEAILAQDIHATQQRLARATSVLRRAAEVAPAMGLIGT 178
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ +GNL+ +P ++G ++ V+L T G I+ + PL +++ + I
Sbjct: 179 LIGLVQMLGNLN-NPAVIGPSMAVALLTTFYGAIMGNVVFLPLAGKLERNGADDTLVRRI 237
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+++ P+ LP ++R
Sbjct: 238 YLVGILSVARKENPRRLEMLLNSALPPAQR 267
>gi|315125811|ref|YP_004067814.1| flagellar motor protein PomA [Pseudoalteromonas sp. SM9913]
gi|315014325|gb|ADT67663.1| flagellar motor protein PomA [Pseudoalteromonas sp. SM9913]
Length = 238
Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 98/253 (38%), Gaps = 24/253 (9%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
F + G + +VIV G L + + G + F +K +
Sbjct: 4 FMSSSGEVAMFYNTPSVVIVFGGSLFIVLSNFTMSQFLGIGKVCAKAFMFKIEPPEA--- 60
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+++ L + +KG E F+ + M++ G+
Sbjct: 61 LIEKAVELADSARKGGFLALEEA-------------------EIPNPFMRKGVDMLVDGH 101
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+ + + ++I + +G+ PA+G++G ++G++ + N+ PK
Sbjct: 102 -DADVVRATLQKDISLTTTRHEMGATLFKSLGDIAPAMGMIGTLIGLVAMLSNMDD-PKA 159
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+G A+ V+L TL G L+ + P+ +++ + ++ ++ A++ +G P+V
Sbjct: 160 IGPAMAVALLTTLYGAFLANVVAIPIQVKLELRKDEEAMNQRLILDAVLGIQDGQNPKVI 219
Query: 258 IEYGRKVLPLSER 270
+ L S+R
Sbjct: 220 EGILKNYLAESKR 232
>gi|46202086|ref|ZP_00053785.2| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 265
Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 100/266 (37%), Gaps = 16/266 (6%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
T+IG +++L IIG + N I + +++V G L + + +K + ++
Sbjct: 5 TVIGFTLSLLLIIGSILELTTNFKIFLHLSGLLMVIGGTLAAANVGFEARYVKQALGNIK 64
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
IF + + + + + Y L+K E+ + F + L
Sbjct: 65 AIFFSPKMARGMLTNEVARVIRWGYLLQKSGIQALESDVKSLKGQDAFLAYGVGL----- 119
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
+V E+ +++D +++ + +M + PA G++ ++
Sbjct: 120 -----------VVSGYTGEEVRHMLDNQVETAFQRHTVSVEILKYMASNAPAFGMMATLV 168
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G++ + N+ P LG + V L GTL G++ + + P + ++V
Sbjct: 169 GLVVMLDNMGDDPSKLGAGMAVGLLGTLYGVLFARLILMPAAEKAHQRESIIRFRNMLVA 228
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLS 268
+ L+ P+ + L +
Sbjct: 229 EGLVMLAERRSPRFIQDAMNSYLDPA 254
>gi|302343052|ref|YP_003807581.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301639665|gb|ADK84987.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 260
Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 101/252 (40%), Gaps = 24/252 (9%)
Query: 23 GNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLL 82
G+ I I+IV G + ++A P+ + S + + IF + + ++ L
Sbjct: 24 GSLVAFIDVPSILIVIGGTISATLVAYPMSAVVRSMKASMSIFFQPRI---DHVGTVREL 80
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
++K E + + F+ +++ G R +
Sbjct: 81 LKAADAVRKEGPLALE-------------------KMKPPSEFMGTAFQLVADG-MRPED 120
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
I +++ E + ++ + M E PA G++G ++G++ + NLS P +G A+
Sbjct: 121 IRHVLTIEAEAAYSRSMEVIGVMEKMAELAPAWGMIGTLIGLVIMLLNLSD-PSAIGPAM 179
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+L T G + + L +P ++++ +Q + +V + + P+ +
Sbjct: 180 AVALLTTFYGALWANFLLSPGATKLEERAGRQSEDFKLVIEGAMGMARNENPRQIQQRLM 239
Query: 263 KVLPLSERPSIE 274
+P S+R ++
Sbjct: 240 GFMPPSDRAELQ 251
>gi|188584557|ref|YP_001928002.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
gi|179348055|gb|ACB83467.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
Length = 257
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 96/255 (37%), Gaps = 27/255 (10%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGVSLLEIFGYKALGQDTYC 76
GGN ++++ G + ++ P + + L F +++
Sbjct: 20 IMIDGGNFAAYFDKHAVIVIFGGAIAATMIRFPFSTMLHGLPMGLRYAFTMRSVKPH--- 76
Query: 77 DVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
++++ + + ++K E+ I DP F+ R I
Sbjct: 77 ELIEEITKIADVVRKSGPIALESMEISDP--------------------FLAQGARYIAD 116
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
G R + I + M+ + D L + G+ PA G++G ILG++ N+S P
Sbjct: 117 GYDRDF-IRDTMERDRDNFLMHLDEGSKIYRAFGDCAPAWGMIGTILGMVTMFANMSD-P 174
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
LG A+ +L TL G +++ + P+ ++ ++ ++ ++ + P
Sbjct: 175 SKLGPAMATALLATLYGALIANMVTLPIADKLHVKLEEEDVSRSLIIDGILLIRDQKSPS 234
Query: 256 VAIEYGRKVLPLSER 270
+ E LP + R
Sbjct: 235 LVREMLIAYLPANHR 249
>gi|120552992|ref|YP_957343.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120322841|gb|ABM17156.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 257
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 104/275 (37%), Gaps = 26/275 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV- 59
+ T++GL L ++ + + IV G ++ + + +
Sbjct: 3 ILTLVGLLAGTLIVLLAM-LANATVLTFLNLPGLAIVLGGTFAVTLIKFRMPSVLSAFRL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+ F K ++++ + +L ++K ENH
Sbjct: 62 AFRAAFTDKLARPA---ELIREVGVLARVVRKEGILGLENH------------------- 99
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ F+ + + + G+ +E + ++ +GES PAIG++G
Sbjct: 100 DTKDEFLQKAINLCVDGH-PPELVEEALLQDSQQTAERYEVAERVFRGIGESAPAIGMLG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + L P +G A+ ++L TL G ++ + PL +++ R +
Sbjct: 159 TLVGLVQMLNTLDD-PSSIGPAMAIALLTTLYGAFIAQLMALPLADKLQLKAEDDARNQM 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ ++ + M G P+V E + R ++E
Sbjct: 218 LIITSIKSIMRGENPRVMTELLSSYVSPEHRTNLE 252
>gi|268316338|ref|YP_003290057.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
gi|262333872|gb|ACY47669.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
Length = 262
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 96/257 (37%), Gaps = 23/257 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST IGL + I + GGN + I+IV G + ++A + +K L
Sbjct: 4 STPIGLGLGFALIFAAIFL-GGNWLTFVDIPSILIVVGGTIAALLVAYSIDELKVVVPGL 62
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + + Y L L ++ + + + +
Sbjct: 63 QGLLKFNPPDLNQYV---HLFTDLSRTARREGLLALDRRLGEVED--------------- 104
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI + M + G EI ++ + ++ G P+ G++G +
Sbjct: 105 --AFIRFGLEMAVDG-IEEQEIAEMLQVRMTEEFRPIQLFAKIMNSAGTFAPSFGMIGTL 161
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+++ M NL+ P +G + V++ TL G +L+ + PL ++ K + +
Sbjct: 162 IGLVQMMQNLTD-PTQIGAGMAVAMLTTLYGAVLANLVFLPLANKTKVQLALLQKAREMT 220
Query: 242 KKALIAYMNGAIPQVAI 258
+ +++ + G P +
Sbjct: 221 RVGILSIVRGDSPSMIE 237
>gi|149375612|ref|ZP_01893381.1| Flagellar motor component [Marinobacter algicola DG893]
gi|149360014|gb|EDM48469.1| Flagellar motor component [Marinobacter algicola DG893]
Length = 257
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 102/271 (37%), Gaps = 26/271 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV- 59
+ T++GL +L ++ + + IV G ++ L + +
Sbjct: 3 ILTLVGLVAGVLIVLLAM-LANASILTFFNLPGLAIVLGGTFAVTLIKFRLPSVMSAFRL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+ F + + ++++ + L ++K ENH +
Sbjct: 62 AFSAAFKDRV---ERPAELIREVGTLALVVRKEGILGLENHTTN---------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + + + G+ +E + +E +GES PAIG++G
Sbjct: 103 ---NEFLQKAINLCVDGH-PPELVEEALAQETQQTAERYEVSERVFRGIGESAPAIGMLG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + L P +G A+ ++L TL G ++ + PL +++ + R +
Sbjct: 159 TLVGLVQMLNTLDD-PSSIGPAMAIALLTTLYGAFIAQLIALPLADKLQLKAEDEARNQV 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ ++ M G P+V E + R
Sbjct: 218 LITTSMRTIMRGENPRVMTELLSSFVTPEHR 248
>gi|119472096|ref|ZP_01614327.1| flagellar motor protein PomA [Alteromonadales bacterium TW-7]
gi|119445116|gb|EAW26409.1| flagellar motor protein PomA [Alteromonadales bacterium TW-7]
Length = 238
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 98/254 (38%), Gaps = 24/254 (9%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
F + G + VIV G L + + G + + F +K + +
Sbjct: 4 FMSSSGEMGMFADAPSSVIVFGGSLFIVLSNFTMSQFLGIGKVVGKAFMFKIESPE---E 60
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+++ L + +KG E F+ + M++ G+
Sbjct: 61 LIEKAVELADSARKGGFLALEEA-------------------EIPNPFMRKGVDMLVDGH 101
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+ + + ++I + + + PA+G++G ++G++ + N+ PK
Sbjct: 102 -DADVVRATLQKDISLTTTRHELGAGLFKALADIAPAMGMIGTLIGLVAMLSNMDD-PKA 159
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+G A+ V+L TL G L+ + P+ +++ + ++ ++ A++ +G P+V
Sbjct: 160 IGPAMAVALLTTLYGAFLANVVAIPIQVKLELRKDEEAMNQRLILDAILGIQDGQNPKVI 219
Query: 258 IEYGRKVLPLSERP 271
+ L S+R
Sbjct: 220 EGILKNYLAESKRK 233
>gi|126668170|ref|ZP_01739131.1| Flagellar motor component [Marinobacter sp. ELB17]
gi|126627319|gb|EAZ97955.1| Flagellar motor component [Marinobacter sp. ELB17]
Length = 257
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 107/275 (38%), Gaps = 26/275 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV- 59
+ T++GL +L +I + + IV G ++ L + +
Sbjct: 3 ILTLVGLVAGMLVVILAM-LANATLLTFLNLPGLAIVLGGTFAVTLIKFRLSSLMSAIRL 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+ F + D ++++ + L ++K ENH D
Sbjct: 62 ASRAAFMDRVERPD---ELIREVGALAMVVRKEGILGLENHTTD---------------- 102
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ + + + G++ +E + EI +GES PAIG++G
Sbjct: 103 ---NVFLEKAINLCVDGHS-PELVEEALHHEIQQCSERYEVAERVFRGIGESAPAIGMLG 158
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+++ + L P +G A+ ++L TL G ++ + PL +++ + R +
Sbjct: 159 TLVGLVQMLNTLDD-PSSIGPAMAIALLTTLYGAFIAQLIALPLADKLQLKAEDEMRNQL 217
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIE 274
++ ++ + G P+V E L +R S++
Sbjct: 218 LIATSIQKILQGENPRVMTELLSSFLNPEQRDSLK 252
>gi|118477163|ref|YP_894314.1| flagellar motor protein MotP [Bacillus thuringiensis str. Al Hakam]
gi|118416388|gb|ABK84807.1| chemotaxis protein, MotA [Bacillus thuringiensis str. Al Hakam]
Length = 284
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 27 ISSPVGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 84
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 85 -KYTKSIFTVLHRKEEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 132
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 133 ------PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 185
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 186 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 244
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 245 KKFVIEAISELYRGQIPS 262
>gi|254463495|ref|ZP_05076911.1| chemotaxis protein MotA [Rhodobacterales bacterium HTCC2083]
gi|206680084|gb|EDZ44571.1| chemotaxis protein MotA [Rhodobacteraceae bacterium HTCC2083]
Length = 239
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 102/263 (38%), Gaps = 24/263 (9%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+IGG +GG + ++IV G + P+ S ++ + F + Q+
Sbjct: 1 MIGGAMVVGGGLAPFVDTPSVLIVIGGTFFAAMYTTPIGTFLGSFSAMAKAFLPPVMKQN 60
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
+++ + L +K E F M+++
Sbjct: 61 V---LIERMVELAGVARKDGMMALEGQ-------------------EVPDKFFGKGMQLL 98
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ G + ++ +++EI + + + + PA+G++G ++G++ +GN+ +
Sbjct: 99 VDGADETKLVQQ-LNQEIKSMKGRHEANQNVVKAWIDLAPAMGMIGTLIGLVLMLGNM-E 156
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
K +G ++ V+L T+ G IL+ + P+ ++++ + ++ L G
Sbjct: 157 DVKSIGPSMAVALLTTMYGAILANVIFGPMLTKLEGYTAYEVTYREMIVLGLRNIARGES 216
Query: 254 PQVAIEYGRKVLPLSERPSIEIV 276
P+ + LP + IE
Sbjct: 217 PRNIQDQMVSNLPPKMQAKIEAA 239
>gi|220935191|ref|YP_002514090.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219996501|gb|ACL73103.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 277
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 109/290 (37%), Gaps = 26/290 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST +G+ +L ++ + + I + IV G L +++ PL +
Sbjct: 4 STALGMIGGVLILVSVIAFTSQDLGVFINLPGLGIVLGGTLAATLLSYPLHEVLHVWRVF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + + D + + L +N G+ + ++ N + T + V+++
Sbjct: 64 IVVLRNERYYFREDMDEIVEVSKLWFN---GNLAAVQRRLETIRNPYLRTGVQLVIDDTP 120
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ +I +L+ + + + M PA G++G +
Sbjct: 121 M------------------EDISDLLQWRLARLRAREHAEAQVFRTMATYAPAFGMLGTL 162
Query: 182 LGIIKAM-GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I + + ++ +GV+L T GI+L+ + P+ ++++ ++ L +
Sbjct: 163 IGLINMLFATQTNDFAVIAVNLGVALITTFYGIVLANLVFRPIATKLERRTEERVMLMNM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
V + + G P E + + + + QE+ N +K +
Sbjct: 223 VLEGVTLMRKGRSPAYIRETLKSFMEHHR----DEIRQEMPNGNGAEKPA 268
>gi|332534967|ref|ZP_08410785.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
gi|332035585|gb|EGI72077.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
Length = 238
Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 98/254 (38%), Gaps = 24/254 (9%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
F + G + VIV G L + + G + + F +K + +
Sbjct: 4 FMSSSGEMAMFADAPSSVIVFGGSLFIVLSNFTMSQFLGIGKVVAKAFMFKIETPE---E 60
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+++ L + +KG E F+ + M++ G+
Sbjct: 61 LIEKAVELADSARKGGFLALEEA-------------------EIPNPFMRKGVDMLVDGH 101
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+ + + ++I + + + PA+G++G ++G++ + N+ PK
Sbjct: 102 -DADVVRATLQKDISLTTTRHEMGAGLFKSLADIAPAMGMIGTLIGLVAMLSNMDD-PKA 159
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+G A+ V+L TL G L+ + P+ +++ + ++ ++ A++ +G P+V
Sbjct: 160 IGPAMAVALLTTLYGAFLANVVAIPIQVKLELRKDEEAMNQRLILDAILGIQDGQNPKVI 219
Query: 258 IEYGRKVLPLSERP 271
+ L S+R
Sbjct: 220 EGILKNYLAESKRK 233
>gi|196045128|ref|ZP_03112361.1| putative chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|229183919|ref|ZP_04311135.1| Chemotaxis protein, MotA [Bacillus cereus BGSC 6E1]
gi|196024130|gb|EDX62804.1| putative chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|228599571|gb|EEK57175.1| Chemotaxis protein, MotA [Bacillus cereus BGSC 6E1]
Length = 277
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRKEEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|225863586|ref|YP_002748964.1| putative chemotaxis protein MotA [Bacillus cereus 03BB102]
gi|225788831|gb|ACO29048.1| putative chemotaxis protein MotA [Bacillus cereus 03BB102]
Length = 277
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRKEEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|84514794|ref|ZP_01002157.1| Flagellar motor protein MotA [Loktanella vestfoldensis SKA53]
gi|84510953|gb|EAQ07407.1| Flagellar motor protein MotA [Loktanella vestfoldensis SKA53]
Length = 239
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 98/263 (37%), Gaps = 24/263 (9%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQD 73
+I G +GG + I+IV G + PL S ++ + F Q+
Sbjct: 1 MIIGAMIVGGGVAPFVDVPSILIVIGGTFFAAMYTTPLATFLGSFGAMSKAFLPPVKKQN 60
Query: 74 TYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
+++ + L +K E F M+++
Sbjct: 61 V---LVERMVELAGIARKDGMMALEGQ-------------------AVPDKFFEKGMQLL 98
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ G + ++ + EI + + + PA+G++G ++G++ +GN+S
Sbjct: 99 VDGADETKLVKQ-LTAEIKSMKSRHEANQLVVKAWIDLAPAMGMIGTLIGLVLMLGNMSD 157
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
PK +G A+ V+L T+ G I++ L PL ++++ + +V L G
Sbjct: 158 -PKAIGPAMAVALLTTMYGAIVANVLFGPLLTKLEGYTAYEVIYREMVVLGLRNIARGES 216
Query: 254 PQVAIEYGRKVLPLSERPSIEIV 276
P+ + LP + I+
Sbjct: 217 PRNIQDQMASNLPPKMQAKIDAA 239
>gi|114778392|ref|ZP_01453239.1| MotA/TolQ/ExbB proton channel [Mariprofundus ferrooxydans PV-1]
gi|114551355|gb|EAU53912.1| MotA/TolQ/ExbB proton channel [Mariprofundus ferrooxydans PV-1]
Length = 276
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 98/265 (36%), Gaps = 22/265 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI G+ I II + P + I ++IV G +++ P + +
Sbjct: 3 LSTIAGILAGIGLIILSVFLSSVQPDVYINLPGLLIVVGGTFAATLVSFPAQELGKVWRV 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F D + + + G E+ + N
Sbjct: 63 LGNVFRNNEYS---ISDDISEIANAARLRRHGDLARIEDQLSRIGN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++++I N + EI N++ I + ++ H M PA G+ G
Sbjct: 106 ---PFLRTAIQLVID-NTPTEEIVNILQWRIKRLREQERAEAHVFHVMSVYAPAFGMFGT 161
Query: 181 ILGIIKAMGNLSQSPKI-LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G++ + +S + +G + V+L TL G+ILS + P+ +++ K+ +
Sbjct: 162 LVGMVNMLFGISGPDMLNIGHNMAVALMTTLYGVILSNLIFKPIAIKLERRTEKRAMIMR 221
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKV 264
++ + I P E
Sbjct: 222 MIVEGTIMLAGNRSPVFIRETLSSF 246
>gi|229096213|ref|ZP_04227186.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-29]
gi|229102325|ref|ZP_04233034.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-28]
gi|228681226|gb|EEL35394.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-28]
gi|228687173|gb|EEL41078.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-29]
Length = 277
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPMGIIVGFAIVIAAIVLSGGGIKAFKNFLDIPSILIVIGGTAATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKNGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDED-ELKEVLMKDIETEVYELRKGATLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|228926762|ref|ZP_04089830.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832875|gb|EEM78444.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 277
Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|229115168|ref|ZP_04244578.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-3]
gi|228668308|gb|EEL23740.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-3]
Length = 277
Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPMGIIVGFAIVIAAIVLSGGGIKAFKNFLDIPSILIVIGGTAATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVNFSKKSKKNGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++I+ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDED-ELKEVLMKDIETEVYELRKGATLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|229172374|ref|ZP_04299933.1| Chemotaxis protein, MotA [Bacillus cereus MM3]
gi|228610845|gb|EEK68108.1| Chemotaxis protein, MotA [Bacillus cereus MM3]
Length = 277
Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMIGGGGVKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRKEEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|301053264|ref|YP_003791475.1| flagellar motor protein [Bacillus anthracis CI]
gi|300375433|gb|ADK04337.1| flagellar motor protein [Bacillus cereus biovar anthracis str. CI]
Length = 277
Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDED-ELKEVLIKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|196033497|ref|ZP_03100909.1| putative chemotaxis protein MotA [Bacillus cereus W]
gi|195993931|gb|EDX57887.1| putative chemotaxis protein MotA [Bacillus cereus W]
Length = 277
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 100/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL+ ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLSEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|289548705|ref|YP_003473693.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
gi|289182322|gb|ADC89566.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
Length = 249
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 102/268 (38%), Gaps = 22/268 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T++G+ + ++ G G + L+QP VIV L ++ PL
Sbjct: 3 LLTLVGILGGLTALLIGAVLKGASLLFLLQPAAFVIVVPTTLFASLVTVPLSKFYLIVEG 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L F D +L L + ++K E +D
Sbjct: 63 LRMAFRK---DDDRSVQTKNILIDLAHTVRKEGMLALETKAEDI---------------- 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
FI + ++++G + +E+ ++ E+ E + ES P G+VGA
Sbjct: 104 -TDPFIRKAVDLMVLGVDEATFVES-LETEVAKREEELEIAVEYWKNAAESAPTFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G++KA+ +L + + L I + T+ GI SY + P+ +IK ++ +
Sbjct: 162 VFGLMKALQSL-DNAQELAHGISAAFVATVYGITSSYLIFGPIAKKIKIKGKEEILRMYM 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLS 268
V +A + G P++ E +
Sbjct: 221 VVEAGRMMIRGENPRLIEERLNSFVEAK 248
>gi|196038956|ref|ZP_03106263.1| putative chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|228945330|ref|ZP_04107685.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229090686|ref|ZP_04221919.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-42]
gi|196030101|gb|EDX68701.1| putative chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|228692628|gb|EEL46354.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-42]
gi|228814302|gb|EEM60568.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 277
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 100/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL+ ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLSEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|52143731|ref|YP_083098.1| flagellar motor protein MotP [Bacillus cereus E33L]
gi|51977200|gb|AAU18750.1| chemotaxis protein [Bacillus cereus E33L]
Length = 277
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFSIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|229058359|ref|ZP_04196743.1| Chemotaxis protein, MotA [Bacillus cereus AH603]
gi|228719868|gb|EEL71458.1| Chemotaxis protein, MotA [Bacillus cereus AH603]
Length = 277
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 101/258 (39%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ G+ I + +I GG + I+IV G ++A IK
Sbjct: 20 ISSPFGIVIGFVIVIAAIMLGGGGIKAFKNFLDVPSILIVIGGTTATIIVAYRFGEIKKY 79
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
S+ + + + D L KK E + N
Sbjct: 80 TKSIFTVLHRREENLEQLTD---LFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G + E++ ++ +++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDEA-ELKEVLMRDVETEVYELRKGATLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +++ + PL+ ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVIANMIAIPLSEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAITELYRGQIPS 255
>gi|261856273|ref|YP_003263556.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
gi|261836742|gb|ACX96509.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
Length = 272
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 108/287 (37%), Gaps = 30/287 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T++G+F +IG + + P + +V G + +++ PL +
Sbjct: 4 ATLLGIFGGFGIVIGAIFLSSNHVSDFFSPTSLFLVLGGTIAATLISYPLHEVLRVFRVF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN--HIDDPYNSTIFTSIPTVLEN 119
+ + L + D+ +L+ + + E I++P
Sbjct: 64 TIVLRNERLYTE--RDIAELVDVAKLKFQGQINRADEKLTKINNP--------------- 106
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ M+M++ G + +I L+ I + + M PA G++G
Sbjct: 107 -----FLRTGMQMVLDGASNE-DIMTLLQWRIGRMRARERAEAQIFRTMAAFAPAFGMLG 160
Query: 180 AILGIIKAMGNLSQSP-KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+LG+I + + + +G + ++L TL GI+LS + P+ +++ ++ +
Sbjct: 161 TLLGLINMLHAMDAAHFADIGVNMALALITTLYGILLSNMIFKPIALKLERRTEQRVMVM 220
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
++ + ++ P E + L SE + + + Q
Sbjct: 221 NMMVEGVMLMQQQRSPAFIRETLQSFLAQSE----DELREGASQPGK 263
>gi|42780819|ref|NP_978066.1| flagellar motor protein MotP [Bacillus cereus ATCC 10987]
gi|42736739|gb|AAS40674.1| chemotaxis protein MotA, putative [Bacillus cereus ATCC 10987]
Length = 277
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPFGILVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRKEEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|206974871|ref|ZP_03235786.1| putative chemotaxis protein MotA [Bacillus cereus H3081.97]
gi|206746890|gb|EDZ58282.1| putative chemotaxis protein MotA [Bacillus cereus H3081.97]
Length = 277
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ G+ + +I GG + + I+IV G V+A IK
Sbjct: 20 ISSPFGILVGFAIVIAAIMLGGGGIKVFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRKEEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|224370726|ref|YP_002604890.1| MotA3 [Desulfobacterium autotrophicum HRM2]
gi|223693443|gb|ACN16726.1| MotA3 [Desulfobacterium autotrophicum HRM2]
Length = 298
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 108/279 (38%), Gaps = 23/279 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I GL + + GF GN + + VIV G G +++ ++ + L
Sbjct: 17 IWGLIVCFSLFLMGFAI-HGNTGLYLNLSGFVIVMGGTFGATLISYRMERLVILVRVLWA 75
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ + D D++++L L + + E
Sbjct: 76 SYTREMRNPD---DIVEILVDLSVKRRLKGLLSLQRD-----------------EGETTI 115
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ + ++ G + +I ++ E+ + + + M E PA G+VG+++G
Sbjct: 116 VFLRQAIGFMVDGFS-PAQIRESLNAEMFFFRLRREETSRVLQTMAEVAPAFGLVGSVVG 174
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I + + S I+ T + ++LT TL GI+L+ P + I+ K+ L I+ +
Sbjct: 175 LIGTIAGVGDSAMIMST-VPIALTSTLYGIVLANFFFLPFAANIRERTAKELMLQKIITE 233
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+ A P++ + L S R I +++ Q
Sbjct: 234 GVAAIAGDLHPRMLERKLKSFLTPSARKGELISLEKIRQ 272
>gi|324325746|gb|ADY21006.1| flagellar motor protein MotP [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 277
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPFGILVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRKEEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|49477309|ref|YP_035847.1| flagellar motor protein MotP [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|218902842|ref|YP_002450676.1| putative chemotaxis protein MotA [Bacillus cereus AH820]
gi|228933011|ref|ZP_04095874.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229121279|ref|ZP_04250510.1| Chemotaxis protein, MotA [Bacillus cereus 95/8201]
gi|49328865|gb|AAT59511.1| chemotaxis protein MotA [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218537884|gb|ACK90282.1| putative chemotaxis protein MotA [Bacillus cereus AH820]
gi|228662124|gb|EEL17733.1| Chemotaxis protein, MotA [Bacillus cereus 95/8201]
gi|228826612|gb|EEM72383.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 277
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 100/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL+ ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLSEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|228914306|ref|ZP_04077921.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228845300|gb|EEM90336.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 277
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 100/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGCAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL+ ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLSEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|330445279|ref|ZP_08308931.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489470|dbj|GAA03428.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 215
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 97/237 (40%), Gaps = 26/237 (10%)
Query: 38 AGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET 97
G +M + + ++ F +K + +++ + + +KG
Sbjct: 1 MGGSTFVVLMKYNIGQFFGAAKIAVKAFIFKTDNPE---ELIAKIVEMADAARKGGFLAL 57
Query: 98 EN-HIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
E I +P F+ + M++ G+ + + + ++I +
Sbjct: 58 EEMDIANP--------------------FMRKGIDMLVDGH-DAEVVRGTLQKDISLTNE 96
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILS 216
+ S G+ PA+G++G ++G++ + N+ PK +G A+ V+L TL G +L+
Sbjct: 97 RHEQGVGIFSSFGDVAPAMGMIGTLIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGSMLA 155
Query: 217 YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
+ P+ ++ + ++ ++ ++A +G P+V Y + L +R SI
Sbjct: 156 NMVAIPIADKLTLRKEQERLNKRLILDGVLAIQDGQNPRVIDGYLKNYLHEKKRSSI 212
>gi|217959211|ref|YP_002337759.1| flagellar motor protein MotP [Bacillus cereus AH187]
gi|222095351|ref|YP_002529411.1| flagellar motor protein motp [Bacillus cereus Q1]
gi|229195940|ref|ZP_04322693.1| Chemotaxis protein, MotA [Bacillus cereus m1293]
gi|217066753|gb|ACJ81003.1| putative chemotaxis protein MotA [Bacillus cereus AH187]
gi|221239409|gb|ACM12119.1| chemotaxis protein [Bacillus cereus Q1]
gi|228587499|gb|EEK45564.1| Chemotaxis protein, MotA [Bacillus cereus m1293]
Length = 277
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPFGILVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRKEEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|329895772|ref|ZP_08271148.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC3088]
gi|328922134|gb|EGG29491.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC3088]
Length = 251
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 105/275 (38%), Gaps = 27/275 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TIIGL I + A+ N + ++IV + + L +
Sbjct: 3 IATIIGLVGAFGII---YMAISANAAAFVDTASLLIVVAGSIAVVLARCTLSEFLGAIGV 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L + F K +++ L L +K E +
Sbjct: 60 LGKAFSRKIENP---FELINQLVELATIARKDGMIALEGQ-------------------D 97
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ + M++ G I++ ++ + ++ S GE PA+G+VG
Sbjct: 98 IKNAYMAKAVAMLVDGT-DPDIIKSSLERDTAMMKQRHAMGAGVFSAWGEIAPAMGMVGT 156
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G++ +GN+S PK +G A+ ++L T+ G IL+ +C P+ ++ + + +
Sbjct: 157 LAGLVIMLGNMSD-PKAIGPAMAIALLTTMYGAILANVICLPMAQKLANASALEAANNEL 215
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
+ + ++ +G P+V + + R I
Sbjct: 216 ILEGVLFMQSGGNPRVMGDMLASFVAPKMRSKIAA 250
>gi|83642950|ref|YP_431385.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83630993|gb|ABC26960.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 250
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 40/256 (15%), Positives = 97/256 (37%), Gaps = 25/256 (9%)
Query: 13 CIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
++ G A G + + ++IV ++ ++ S+ F L +
Sbjct: 2 GVVLGAVASGSELWDFVNVPGLMIVVFGSFAVTLV---KHRWRNFFGSVRLAFSTTFLEK 58
Query: 73 -DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
++ + L ++K + F+ +
Sbjct: 59 TQDPWELYREARQLADVVRKQGLLGLD-------------------RVEITHPFLRKAVG 99
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+ + G+ IE ++ E+ + +GES PA+G++G ++G+++ + N+
Sbjct: 100 LAVDGH-PPEFIEEVLLEDTHQYVERLQTAEKVFRGLGESAPALGMLGTLVGLVQMLNNM 158
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
Q P +G A+ ++L T G ++ + PL +++ + R +IV +++ + G
Sbjct: 159 -QDPSSIGPAMAIALLTTFYGAFIAQLIVLPLADKLQLKTQDEVRNRMIVISGILSMVKG 217
Query: 252 AIPQVAIEYGRKVLPL 267
P++ + LP
Sbjct: 218 LNPRIIKDVLASYLPE 233
>gi|47566110|ref|ZP_00237148.1| motility protein A [Bacillus cereus G9241]
gi|47557027|gb|EAL15357.1| motility protein A [Bacillus cereus G9241]
Length = 277
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMIGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +++++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIQLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|207109198|ref|ZP_03243360.1| flagellar motor protein MotA [Helicobacter pylori HPKX_438_CA4C1]
Length = 219
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 95/241 (39%), Gaps = 22/241 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
I+GL + + I G GNP +I ++I+ L + + +K + +
Sbjct: 1 ILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKEIKI 60
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+F + + + +K L L +K E + +
Sbjct: 61 VFLNPKINLN---ETIKNLVELATLARKDGVLSLEGRVAQVED----------------- 100
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F + + MII G ++ ++ I+ + H GE+ P +G+VGA++G
Sbjct: 101 DFTRNGLSMIIDGKDL-KSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMG 159
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ A+ L +P + I + T T+ GI+ +Y++ P ++K+ + ++ +
Sbjct: 160 LMLALQKL-DNPAEMAAGIAGAFTATVTGIMCAYAIFGPFGHKLKAKSKDIIKEKTVLLE 218
Query: 244 A 244
Sbjct: 219 G 219
>gi|163939533|ref|YP_001644417.1| flagellar motor protein MotP [Bacillus weihenstephanensis KBAB4]
gi|229132540|ref|ZP_04261389.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST196]
gi|229166568|ref|ZP_04294320.1| Chemotaxis protein, MotA [Bacillus cereus AH621]
gi|163861730|gb|ABY42789.1| MotA/TolQ/ExbB proton channel [Bacillus weihenstephanensis KBAB4]
gi|228616822|gb|EEK73895.1| Chemotaxis protein, MotA [Bacillus cereus AH621]
gi|228650886|gb|EEL06872.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST196]
Length = 277
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 101/258 (39%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ G+ + + +I GG + I+IV G ++A IK
Sbjct: 20 ISSPFGIVVGFVILIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIIVAYRFGEIKKY 79
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
S+ + + + D L KK E + N
Sbjct: 80 TKSIFTVLHRREENLEQLTD---LFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G + E++ ++ +++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIRLMLSGYDEA-ELKEVLMRDVETEVYELRKGATLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +++ + PL+ ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVIANMIAIPLSEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAITELYRGQIPS 255
>gi|229029407|ref|ZP_04185490.1| Chemotaxis protein, MotA [Bacillus cereus AH1271]
gi|228731866|gb|EEL82765.1| Chemotaxis protein, MotA [Bacillus cereus AH1271]
Length = 277
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPVGIIVGFAIVIAAIMIGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 78 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQLDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +++++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 126 ------PFIQKGIQLMLSGY-DEEELKEVLMKDVETEVYELRKGATLLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 238 KKFVIEAISELYRGQIPS 255
>gi|229160691|ref|ZP_04288683.1| Chemotaxis protein, MotA [Bacillus cereus R309803]
gi|228622706|gb|EEK79540.1| Chemotaxis protein, MotA [Bacillus cereus R309803]
Length = 289
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ +G+ I +I GG + I+IV G V+A IK
Sbjct: 32 ISSPMGIIIGFAIVIAAIMIGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK-- 89
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
IF ++ + L KK E + N
Sbjct: 90 -KYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN----------- 137
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +++++ G E++ ++ ++++ +YE K + +G+ PA G+
Sbjct: 138 ------PFIQKGIQLMLSGYDED-ELKEVLMKDVETEVYELRKGATLLDKIGDFAPAWGM 190
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +L+ + PL ++ +
Sbjct: 191 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTE 249
Query: 238 YIIVKKALIAYMNGAIPQ 255
V +A+ G IP
Sbjct: 250 KRFVIEAISELYRGQIPS 267
>gi|322649568|gb|EFY46000.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
Length = 121
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 64/114 (56%)
Query: 175 IGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
GIV A++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++ +
Sbjct: 1 FGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAET 60
Query: 235 HRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
++ VK L++ +NG P +A+E+GRK L SERPS + + V + +
Sbjct: 61 TKMMQCVKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQ 114
>gi|119094109|gb|ABL60939.1| flagellar motor protein MotA [uncultured marine bacterium
HF10_19P19]
Length = 253
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 46/256 (17%), Positives = 96/256 (37%), Gaps = 24/256 (9%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG + I+IV G + A P+ V ++ + F D ++
Sbjct: 20 MISGGGIAPFVDVPSILIVFGGTAFLVLYAVPMPVFLGHFGAMAKAFLPPIKKMD---EL 76
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
++ + L +K E F ++M++ G
Sbjct: 77 IERMVELSGIARKDGMMALEGQ-------------------EVPDKFFQKGLQMLVDGAD 117
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+ + +++EI + +A+ + PA+G+VG ++G++ +GN+S PK +
Sbjct: 118 EAKLVTQ-LNKEIKAMKNRHEVNQNAVKAWIDIAPAMGMVGTLIGLVLMLGNMSD-PKAI 175
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G A+ V+L T+ G I++ L PL ++++ + +V L P+
Sbjct: 176 GPAMAVALLTTMYGAIIANVLFLPLLNKLEKYTEYELVYRDMVVTGLRNIARSESPRNIQ 235
Query: 259 EYGRKVLPLSERPSIE 274
+ L + +E
Sbjct: 236 DQMVANLAPKMQEKME 251
>gi|94500735|ref|ZP_01307264.1| chemotaxis MotA protein [Oceanobacter sp. RED65]
gi|94427057|gb|EAT12038.1| chemotaxis MotA protein [Oceanobacter sp. RED65]
Length = 266
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 101/278 (36%), Gaps = 16/278 (5%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ I + N + + ++V G+ +++ + + ++
Sbjct: 5 STLIGITAGIGLFVLAVVGSTDNHLMFLSAASAMMVIGSTFAASLISFSFNEVMHALRAM 64
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
LE Q +++ + G + E+ ++ +
Sbjct: 65 LETVQASKSTQSHLSKLVQRFTEFSNIYRDGGISALED---------------SLTKKES 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+F+ + ++ G + +I +M + +D + ++ MG P G+VG I
Sbjct: 110 KDSFLSLGIELMGSGYKSA-DIRVIMGDAMDSHWQRQSLEGKVLNTMGVYAPGFGMVGTI 168
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I + N+ LG + ++L TL G++L+ L P + + + ++ + ++
Sbjct: 169 VGLIIMLDNMGDDMANLGKGLALALITTLYGVLLANLLFKPTAAHVTEKQEQEFFKHQLM 228
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ + S+R + + E
Sbjct: 229 IDGFCLLAEKRDALFIQDRLNAYVKPSKRYHPQELENE 266
>gi|152975139|ref|YP_001374656.1| flagellar motor protein MotP [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152023891|gb|ABS21661.1| MotA/TolQ/ExbB proton channel [Bacillus cytotoxicus NVH 391-98]
Length = 277
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 101/258 (39%), Gaps = 25/258 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPY---ILIQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ G+ + + +I GG + I+IV G + ++A IK
Sbjct: 20 ISSPFGIIVALAVLITAIMLGGGGMKGFKNFLDVSSILIVVGGTIATIIIAYRFSEIK-- 77
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+ IF ++ + ++ KK E + N
Sbjct: 78 -KYVKSIFSVLHRKEEDLEQLTEMFVEFSKKSKKYGLLSLEADGEQIDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
FI +R+++ G E+ ++ ++I+ +YE K + +G+ PA G+
Sbjct: 126 ------AFIQKGIRLMLSGYDED-ELREILTKDIETEVYELKKGAILLDKIGDFAPAWGM 178
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G ++G+I + NL + +GT + V++ TL G +++ + PL ++ +
Sbjct: 179 IGTLIGLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVIANMIMIPLAEKVYRGIEDIYIE 237
Query: 238 YIIVKKALIAYMNGAIPQ 255
+ +A+ G IP
Sbjct: 238 KKFIIEAISEVYRGQIPS 255
>gi|30261728|ref|NP_844105.1| flagellar motor protein MotP [Bacillus anthracis str. Ames]
gi|47526944|ref|YP_018293.1| flagellar motor protein MotP [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184554|ref|YP_027806.1| flagellar motor protein MotP [Bacillus anthracis str. Sterne]
gi|65318993|ref|ZP_00391952.1| COG1291: Flagellar motor component [Bacillus anthracis str. A2012]
gi|254723804|ref|ZP_05185590.1| flagellar motor protein MotP [Bacillus anthracis str. A1055]
gi|254734567|ref|ZP_05192279.1| flagellar motor protein MotP [Bacillus anthracis str. Western North
America USA6153]
gi|254759754|ref|ZP_05211778.1| flagellar motor protein MotP [Bacillus anthracis str. Australia 94]
gi|300117354|ref|ZP_07055144.1| flagellar motor protein MotP [Bacillus cereus SJ1]
gi|30255956|gb|AAP25591.1| putative chemotaxis protein MotA [Bacillus anthracis str. Ames]
gi|47502092|gb|AAT30768.1| putative chemotaxis protein MotA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178481|gb|AAT53857.1| chemotaxis protein MotA, putative [Bacillus anthracis str. Sterne]
gi|298725189|gb|EFI65841.1| flagellar motor protein MotP [Bacillus cereus SJ1]
Length = 254
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 95/253 (37%), Gaps = 25/253 (9%)
Query: 6 GLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
G+ + +I GG + I+IV G V+A IK
Sbjct: 2 GIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK---KYTK 58
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
IF ++ + L KK E + N
Sbjct: 59 SIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN---------------- 102
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++
Sbjct: 103 -PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLI 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I + NL + +GT + V++ TL G +L+ + PL ++ + V
Sbjct: 161 GLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVI 219
Query: 243 KALIAYMNGAIPQ 255
+A+ G IP
Sbjct: 220 EAISELYRGQIPS 232
>gi|114321224|ref|YP_742907.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114227618|gb|ABI57417.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
Length = 277
Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 95/269 (35%), Gaps = 22/269 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST IG+ + ++ + P I + IV G ++ PLK +
Sbjct: 4 STTIGMLGGLGMLVTVLFFAAEEPAAFINLPGLAIVLGGTFAATFLSYPLKEVLRVFGLF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + L + L + L +G E +D N
Sbjct: 64 GIVLRNERLYTRDDMEELIQISRLWL---RGDIRAVEAALDKVSN--------------- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++++I +I +L+ I + + M PA G++G +
Sbjct: 106 --PFLRTGVQLLID-LTPEEDILDLLQWRISRLRARERAEAQLFRVMASFAPAFGMIGTL 162
Query: 182 LGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I M L Q ++G + V+L T GI+L+ + P+ +++ ++ L +
Sbjct: 163 VGLINMMFILDQGDIALIGQHMAVALLTTFYGILLANMVFKPIAVKLERRTEQRVVLMNM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
V + + P + E + +
Sbjct: 223 VLQGISMMCQKRNPTLMRETLNSFMAHYK 251
>gi|119385372|ref|YP_916428.1| chemotaxis protein MotA [Paracoccus denitrificans PD1222]
gi|119375139|gb|ABL70732.1| chemotaxis protein MotA [Paracoccus denitrificans PD1222]
Length = 148
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M +IG+ +T + GG+ GG +++ PFE++++ GA +G F+++N VIK +
Sbjct: 1 MFGMIGIVVTFAMVFGGYILAGGKLGVILHSLPFEMMMIGGAAVGSFLLSNETAVIKQAL 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+ + DVL LL+ L+ + S E E HI+ P +S+IF + P +L
Sbjct: 61 GGIGRSLKGPRWHESDVQDVLCLLFQLLRIAR-ASPVELEEHIEKPESSSIFQAYPRILA 119
Query: 119 NNELTTFICDYMRMIIVGNARSYEIEN 145
+ + T I D +R + Y++ +
Sbjct: 120 DEHVVTLIADTLRSASLNYDDPYQVAD 146
>gi|154173849|ref|YP_001407728.1| flagellar motor protein MotA [Campylobacter curvus 525.92]
gi|112803558|gb|EAU00902.1| flagellar motor protein [Campylobacter curvus 525.92]
Length = 257
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 104/269 (38%), Gaps = 22/269 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ +++ I G GG+P +I ++IV + + + K IK +
Sbjct: 3 LSTILGMLLSVTSISIGDILEGGSPLHVIHVSSLLIVIPTAIFSAMTSTNKKFIKPAFKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L IF ++K L L ++ E + +
Sbjct: 63 LKIIFKGTG---TDVPKLIKELIDLSVTARRDGLLALEPKVATIED-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ M M++ G +I M+ +I+ + + H GES P G+VGA
Sbjct: 106 ---EFLKSAMMMLVDGQPIG-DIRENMEIKIEQLEEYYHECGHFWIKTGESCPTFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++ + L P + I + T T+ GI+ +Y++ P ++I + R +
Sbjct: 162 VM-GLMLALALLDDPAAMAAGIAGAFTATVTGIMGAYAIFGPWGAKIMANAKDIIRTKTV 220
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
+ +A+ GA P+ E L E
Sbjct: 221 IIEAVTGIAEGANPRNLEERLFNFLSHDE 249
>gi|254683215|ref|ZP_05147076.1| flagellar motor protein MotP [Bacillus anthracis str. CNEVA-9066]
gi|254740976|ref|ZP_05198664.1| flagellar motor protein MotP [Bacillus anthracis str. Kruger B]
Length = 254
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 95/253 (37%), Gaps = 25/253 (9%)
Query: 6 GLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
G+ + +I GG + I+IV G V+A IK
Sbjct: 2 GIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK---KYTK 58
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
IF ++ + L KK E + N
Sbjct: 59 SIFTVLHRREEDLEQLTDLFVDFSKKSKKHCLLSLEVDGEQVDN---------------- 102
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
FI +R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++
Sbjct: 103 -PFIQKGIRLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLI 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I + NL + +GT + V++ TL G +L+ + PL ++ + V
Sbjct: 161 GLIIMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVI 219
Query: 243 KALIAYMNGAIPQ 255
+A+ G IP
Sbjct: 220 EAISELYRGQIPS 232
>gi|157736661|ref|YP_001489344.1| flagellar motor protein MotA [Arcobacter butzleri RM4018]
gi|315635827|ref|ZP_07891089.1| flagellar motor protein MotA [Arcobacter butzleri JV22]
gi|157698515|gb|ABV66675.1| flagellar motor component MotA [Arcobacter butzleri RM4018]
gi|315479806|gb|EFU70477.1| flagellar motor protein MotA [Arcobacter butzleri JV22]
Length = 252
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 95/254 (37%), Gaps = 22/254 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+S +IG+ + I G GGNP ++ +IV + V A I +
Sbjct: 3 LSVLIGMIGAVASISIGDLMEGGNPLHVLHFSSFLIVIPTAMLSAVTATESHAISAAFKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
IF + + D L +KK E + +
Sbjct: 63 FKMIFKKLPINFEARIDE---LVEYAITVKKQGVLALEKDVQNIN--------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + + M+I G ++ +IE ++ I+ + H GE+ P +G+VGA
Sbjct: 105 --HEFLKEALSMVIDG-SKEEQIEESLEPVIEETEHYYHSASHYWLLAGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+I A+ L +P + I + T T+ GI SY P ++KS + +
Sbjct: 162 VLGLILALQKL-DNPAEMAAGIAGAFTATVTGIAGSYMFLGPWGLKMKSKGHVIVKEQQL 220
Query: 241 VKKALIAYMNGAIP 254
+ A G P
Sbjct: 221 ILAAAKGMARGDAP 234
>gi|121998796|ref|YP_001003583.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121590201|gb|ABM62781.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
Length = 301
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 100/266 (37%), Gaps = 24/266 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST++G+ ++ + + + + + IV G L +A P+ + +
Sbjct: 4 STLVGIIGGLILVGSVLFIAAEEALVFLNLPGLAIVLGGTLAATFLAYPMDEVLRVFRLV 63
Query: 62 LEIFGY-KALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + +D +++++ + KG E+ +++ N
Sbjct: 64 WIVIRNERVYTRDDMEELIRISQLWF----KGDVRAVEDALENVAN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++++I +I +L+ I + ++ M PA G++G
Sbjct: 106 ---PFLRTGVQLLID-LTPEEDILDLLQWRIQRLRAKEHAEAQIFRVMASFAPAFGMIGT 161
Query: 181 ILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+I M L +G +GV+L T GI+L+ + P+ +++ ++
Sbjct: 162 LVGLINMMFILDDGDIAQIGQQMGVALLTTFYGILLANLVLKPVAVKLERRTEQRLVTLN 221
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVL 265
++ + + P + E +
Sbjct: 222 MILQGISLMCQKRNPTLMRETLHSFI 247
>gi|256830738|ref|YP_003159466.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
gi|256579914|gb|ACU91050.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
Length = 285
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 109/268 (40%), Gaps = 23/268 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+I+GL + I G + + G+ +IV G LG + + ++ + L
Sbjct: 5 SILGLVL-CALIFGAGFVISGDVGQYFNLSAFLIVFGGCLGTAIASFRMERLVFVSKVLR 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + ++ L L + + ++D ++I
Sbjct: 64 NSYRTRMREPAAIVEI---LVDLSVKSRIRGLHTL---VEDERETSIL------------ 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ + ++ +R + ++++ E+ + + + M + PAIG+ G+++
Sbjct: 106 --FLRRALGFVVDNYSRE-QTTDILNTEMYFFKQRRDESERVLRVMADICPAIGLAGSVV 162
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I + ++ + +L T I ++LT TL G+IL+ + PL ++I+ L I+
Sbjct: 163 GLIGMLSGVNDTGVVLAT-IPIALTSTLYGVILANFVFLPLAARIREVTDHDLLLQKIII 221
Query: 243 KALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ + A + P+V + L S R
Sbjct: 222 EGVRAIQSELNPRVLEVKLKSFLTPSAR 249
>gi|92113629|ref|YP_573557.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91796719|gb|ABE58858.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
Length = 299
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 100/269 (37%), Gaps = 22/269 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ ++L + P + IV L ++ P++ + +
Sbjct: 27 STLIGITASVLLLATVVLFTAQTPSSFFNFPGLAIVITGTLAATFISYPMREVVRVTRLV 86
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + D + ++ L + + +G+ E ++D N
Sbjct: 87 GLVFRRENSRID---EDIQTLVSMARHWFRGNIRAIEAELEDTRN--------------- 128
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ + ++I EI +++ I + + M PA G++G +
Sbjct: 129 --PFLRTGISLVIANTQDD-EIHDVLRWRIARMRAREYAESQIFRTMATYAPAFGMLGTL 185
Query: 182 LGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I + ++ ++G + V+L T GI+L+ L P+ +++ ++ +
Sbjct: 186 IGLINMLEVINGGDLTVIGPRLAVALMSTFYGILLANLLFKPIAVKLERRTEERLIEMHM 245
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
V + ++ +P + + +
Sbjct: 246 VMEGVMLVAKRRLPSFIEDTLHSFMAEHQ 274
>gi|320354495|ref|YP_004195834.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
gi|320122997|gb|ADW18543.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
Length = 287
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 23/258 (8%)
Query: 15 IGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDT 74
GGF G N + ++IVAG +++ L+ ++ + + + +
Sbjct: 17 FGGFLIKG-NLSLYFNIASLMIVAGGSAIAALLSFQLERLRIVLRVVRASYRSRLKSEAE 75
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
D+ L L + + EN F+ + ++
Sbjct: 76 IVDI---LINLAIKSRMEGILSLQQD-----------------ENETSIHFLRRGLGCLV 115
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+I ++++ E+ + + + + PA GIVG++ G+I + + +
Sbjct: 116 DNY-EPQQIRDILNTEMYFFKLRREDSERVLRTIADFCPAFGIVGSVAGLIPMLAGIDDT 174
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
I+ + ++LT L G+IL P + ++ ++ L I+ + +IA + P
Sbjct: 175 -GIILKTVPLALTSILYGLILPNFFFIPFAANLRERTNQELLLQKIIMEGIIAIESELNP 233
Query: 255 QVAIEYGRKVLPLSERPS 272
V L S+R +
Sbjct: 234 TVLRTKLLSFLTPSDRKA 251
>gi|311696642|gb|ADP99515.1| MotA/TolQ/ExbB proton channel [marine bacterium HP15]
Length = 248
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 99/266 (37%), Gaps = 30/266 (11%)
Query: 6 GLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV-SLLEI 64
G+ I I+ + + + IV G ++ + + + ++
Sbjct: 3 GVLIVIMA-----MLANASFLTFLNLPGLAIVLGGTFAVTLIKFRMASVMSAFRLAMSAA 57
Query: 65 FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
F + ++++ + L ++K ENH D
Sbjct: 58 FTDRMARP---TELIREVGSLAMVVRKEGILGLENHQTD-------------------NE 95
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + + + G+ +E + +E +GES PAIG++G ++G+
Sbjct: 96 FLQKAINLCVDGH-PPELVEEALAQETQQTAERYEVAERVFRGIGESAPAIGMLGTLVGL 154
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++ + L P +G A+ ++L TL G ++ + PL +++ + R +++ +
Sbjct: 155 VQMLNTLDD-PSSIGPAMAIALLTTLYGAFIAQLVALPLADKLQLKAEDEARNQVLIITS 213
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSER 270
+ M G P+V E + +R
Sbjct: 214 IKNIMRGENPRVMTELLSSFVHPEQR 239
>gi|225849165|ref|YP_002729329.1| flagellar motor protein MotA [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644734|gb|ACN99784.1| chemotaxis protein MotA (Motility protein A) [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 253
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 22/261 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI G+ ++ G GGNP LI I+IV L +A K + +
Sbjct: 3 ITTIGGIIAALVLFAIGDILEGGNPAGLIHISSIIIVVPTTLSAAAVATKQKYVVAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +FG L + D + + +K E I + +
Sbjct: 63 LKIVFGNPQLNPEETLD---QIIKIAEKARKEGILSIEAEIGNIDD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F ++M++ G I M+ EI I GE+ P G+VGA
Sbjct: 106 ---PFFRRGLQMLVDG-LEPEVIRERMELEIAEIEEYYEGAAKYWITAGETTPVFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+ L ++P + I + T T+ GI+ SY L P ++K+ + +
Sbjct: 162 VMGLILALKRL-ENPVEMAEGIAGAFTATVTGIVSSYLLFGPFGHKMKAKAKDIIKTREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYG 261
+ + +I P++ E
Sbjct: 221 ILEGIIGIALAKNPKMLREQL 241
>gi|289808525|ref|ZP_06539154.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 128
Score = 131 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 74/128 (57%)
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
IK + ++ +F + Y D+L LLY LM ++ E I++P S IF S
Sbjct: 1 IKGTMKAIPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASY 60
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
P +L + + FI DY+R+II GN ++EIE LMDEEI+ E P ++++ +G+SLP
Sbjct: 61 PRILADAVMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLP 120
Query: 174 AIGIVGAI 181
A GIV A+
Sbjct: 121 AFGIVAAV 128
>gi|42524416|ref|NP_969796.1| motility protein A [Bdellovibrio bacteriovorus HD100]
gi|39576625|emb|CAE80789.1| motility protein A [Bdellovibrio bacteriovorus HD100]
Length = 293
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 107/292 (36%), Gaps = 27/292 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ ++G+ + + NP + IV+V G L +++ K + +
Sbjct: 27 IAGLLGILAAVSIAVFSILDAAKNPKVFADVHGIVLVIGGTLTVALLSFNFKSLWTALKI 86
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + Y + + + ++ DP +
Sbjct: 87 VTRKMLGRERV--DYLGTIGTIVEISEAYRR-----------DPKSVPALMK-------P 126
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E FI D +++++ E+ +++ + + M PA G++GA
Sbjct: 127 ETHPFIKDGVKLLVEYGFNYDELADVLTNALRGKKKRDDEEIKVWHTMSRFPPAFGLLGA 186
Query: 181 ILGIIKAMGNLSQSPKI--LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
LG+I + L + +G A+ +L T G++++ + P++ ++++ L
Sbjct: 187 TLGMISLLQTLGEPGAQDRIGPAMATALVATFYGLVVANLILIPISEKLQTVSKADVTLR 246
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
I+K+ ++ P EY + L ++R L+ + KKA+
Sbjct: 247 EIIKEGILLVHEKKHPLFIKEYLKSFLSPAQRE-----DDGALKVDTAKKAA 293
>gi|237756520|ref|ZP_04585049.1| chemotaxis protein MotA [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691320|gb|EEP60399.1| chemotaxis protein MotA [Sulfurihydrogenibium yellowstonense SS-5]
Length = 253
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 22/261 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI G+ ++ G GGNP LI I+IV L +A K + +
Sbjct: 3 ITTIGGIIAALILFAIGDILEGGNPAGLIHISSIIIVVPTSLSAAAVATKQKYVAAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +FG L + + L+ + + +K E+ I + +
Sbjct: 63 LKIVFGNPQLNPE---ETLEQIIKIAEKARKEGILAIESDIGNIDD-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F ++M++ G I M+ EI I GE+ P G+VGA
Sbjct: 106 ---PFFRKGLQMLVDG-LEPEVIRERMELEIGEIEEYYEGAAKYWITAGETTPVFGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I A+ L ++P + I + T T+ GI+ SY L P ++K+ + +
Sbjct: 162 VMGLILALKRL-ENPVEMAAGIAGAFTATVTGIVSSYLLFGPWGHKMKAKAKDIIKTREM 220
Query: 241 VKKALIAYMNGAIPQVAIEYG 261
+ + +I P++ E
Sbjct: 221 ILEGIIGIALSKNPKMLREQL 241
>gi|195953008|ref|YP_002121298.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
gi|195932620|gb|ACG57320.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
Length = 244
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 99/264 (37%), Gaps = 23/264 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ +IIG F+ ++ G + G + ILIQP +IV + L G + + P I +
Sbjct: 3 IFSIIG-FLAFGSLLLGAFLDGTHLAILIQPPAFLIVIPSTLLGVLGSVPAGKIGYIIKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + + + +K E+ ID+ +
Sbjct: 62 LKMVFSGSIVNPEKTKEEIL---EIASKARKEGILSLESSIDEIKD-------------- 104
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
I + ++++G I ++++ E+ E E+ P +G+ GA
Sbjct: 105 ---PLIKRGVELMVLG-MEEESIVSILEAELTKEEEELKIGVEYWKTCSETSPTMGLTGA 160
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ G++ A+ L+ P L I + T+ GI SY + P + K+ +
Sbjct: 161 VFGLMHALTELND-PNKLAEGISTAFVATIYGIASSYLIFGPWGRKSKTKLEMIVMAGYM 219
Query: 241 VKKALIAYMNGAIPQVAIEYGRKV 264
+ + G P++ E
Sbjct: 220 TIEGIRLIAKGENPRLIEEKLNAY 243
>gi|153840269|ref|ZP_01992936.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ3810]
gi|149746071|gb|EDM57201.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ3810]
Length = 187
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 70 LGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDY 129
D D++ + + +KG E E +F+
Sbjct: 2 FKADEPEDLIAKIVEMADAARKGGFLALE-------------------EMEINNSFMQKG 42
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
+ +++ G+ + + + ++I + + G+ PA+G++G ++G++ +
Sbjct: 43 IDLLVDGH-DADVVRAALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGTLVGLVAMLS 101
Query: 190 NLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
N+ PK +G A+ V+L TL G +LS L P+ ++ R ++ ++ ++A
Sbjct: 102 NMDD-PKAIGPAMAVALLTTLYGAVLSNMLFFPIADKLSLRRDQETLNRRLIMDGVLAIQ 160
Query: 250 NGAIPQVAIEYGRKVLPLSER 270
+G P+V Y + L +R
Sbjct: 161 DGQNPRVIDSYLKNYLNEGKR 181
>gi|149191101|ref|ZP_01869360.1| flagellar motor protein PomA [Vibrio shilonii AK1]
gi|148835029|gb|EDL52007.1| flagellar motor protein PomA [Vibrio shilonii AK1]
Length = 216
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IGL II GG+ + IV G +M L +
Sbjct: 3 LATLIGLIGGAASIIMAMVL-GGSIMTYYDTTSVFIVIGGSTFVVLMKFTLSQFFSATKI 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ F +K D D++ + + +KG E D NS
Sbjct: 62 AGKAFMFKT---DEPEDLIAKIVEMADAARKGGFLALEEM--DIQNS------------- 103
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + +++ G+ + + N M ++I + +K G+ PA+G++G
Sbjct: 104 ----FMQKGIDLLVDGH-DAEVVRNAMQKDIALTDERHVKGAGVFKAFGDVSPAMGMIGT 158
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ 234
++G++ + N+ PK +G A+ V+L TL G ILS L P+ ++ R ++
Sbjct: 159 LIGLVAMLSNMDD-PKSIGPAMAVALLTTLYGAILSNMLFFPIADKLTLRREQE 211
>gi|228984811|ref|ZP_04144983.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775009|gb|EEM23403.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 251
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 48/250 (19%), Positives = 93/250 (37%), Gaps = 25/250 (10%)
Query: 9 ITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF 65
+ +I GG + I+IV G V+A IK IF
Sbjct: 2 VGFAIVIAAIMIGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK---KYTKSIF 58
Query: 66 GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTF 125
++ + L KK E + N F
Sbjct: 59 TVLHRREEDLEQLTDLFVDFSKKSKKNGLLSLEVDGEQVDN-----------------PF 101
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
I +++++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+I
Sbjct: 102 IQKGIQLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLI 160
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ NL + +GT + V++ TL G +L+ + PL ++ + V +A+
Sbjct: 161 IMLQNLQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAI 219
Query: 246 IAYMNGAIPQ 255
G IP
Sbjct: 220 SELYRGQIPS 229
>gi|289208254|ref|YP_003460320.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
gi|288943885|gb|ADC71584.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
Length = 274
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/278 (13%), Positives = 96/278 (34%), Gaps = 26/278 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ IIG + +I + + + + IV G + +M+ P + +
Sbjct: 6 LLGIIGSLLVFGSVI---AFSSQDLHAFLNLPGLGIVLGGTIAATLMSYPFHEVVRVFRA 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + + Y+ + + +P
Sbjct: 63 GAHAIREERYDIARDLEEIVQVSRYWYSQNLRGVQQRLEQVQNP---------------- 106
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ ++++I +I++L++ + + + M PA G++G
Sbjct: 107 ----FLRTGIQLVIDDTPMD-DIQDLLNWRMARLRAREQADAQMFRTMATYAPAFGMLGT 161
Query: 181 ILGIIK-AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++G+I + + I+ +G++L T GI+L+ + P+ +++ + L
Sbjct: 162 LIGLINLLLTTETDDFTIIAVNLGIALITTFYGILLANLVFRPIAIKLERRTEGRVVLMT 221
Query: 240 IVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVA 277
+V + ++ G P E R + + R I
Sbjct: 222 MVLEGIMLMRKGRSPGYIRETLRSFM-ENHRDEIRQTE 258
>gi|146282857|ref|YP_001173010.1| chemotaxis protein MotA [Pseudomonas stutzeri A1501]
gi|145571062|gb|ABP80168.1| chemotaxis protein MotA [Pseudomonas stutzeri A1501]
gi|327481194|gb|AEA84504.1| chemotaxis protein MotA [Pseudomonas stutzeri DSM 4166]
Length = 269
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 47/269 (17%), Positives = 98/269 (36%), Gaps = 22/269 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ +I + P + I + IV L ++ PL+ + L
Sbjct: 4 STLIGIVASIGLLAVVLLFAAKEPALFIDLPSLGIVLVGTLAATFISYPLREVTRVFGLL 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + L D L + L G E ++ N
Sbjct: 64 WTVLRNERLYTRQDLDELVQISRLWI---SGDLPAVEKAVEQVSN--------------- 105
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++++I N +I ++ I + + M PA G++G +
Sbjct: 106 --PFLRTGVQLVID-NTPEEDILEVLQWRIARLRARENAEAQLFRAMASYAPAFGMIGTL 162
Query: 182 LGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I M L S ++G ++ V+L T G++L+ + P+ +++ ++ L +
Sbjct: 163 VGLINLMFMLGSGDMDLIGRSLAVALMTTFYGVLLANLILKPVAVKLERRTEQRVALMNL 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
V + + N P E + + +
Sbjct: 223 VMQGISMMCNRRSPAYMRETLKSFIAHHD 251
>gi|197337539|ref|YP_002157777.1| chemotaxis MotA protein [Vibrio fischeri MJ11]
gi|197314791|gb|ACH64240.1| chemotaxis MotA protein [Vibrio fischeri MJ11]
Length = 260
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 95/269 (35%), Gaps = 16/269 (5%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
STI GL + +IG + + +IV G L +++ +I S L
Sbjct: 5 STITGLLMAFGVLIGAVTMSTDKYMLFVSLSSFLIVLGGTLTAALISYSYPLILSSFKGL 64
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
L + +K + + EN ++D N +
Sbjct: 65 LVNLLDEKNVTKFKHASIKRTVEWNQIFRSSGMSGLENSLND---------------NEK 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI + +I G + E++ L+DE +++ ++ MG P G++G +
Sbjct: 110 NDPFIRLGVELIGTGY-KGEELKKLLDESNHSQYKQEMTQAEVLNSMGTYAPGFGMIGTL 168
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I + NL+ LG + V+L TL GI+L+ P +I +
Sbjct: 169 IGLIIMLDNLNGDMAALGNGLAVALLTTLYGILLAQVFFKPAAIRISRRVNTNFDNREMQ 228
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
A + + LP +R
Sbjct: 229 INAFVLMTEKRPDLYLQDSMNVHLPFKKR 257
>gi|78485927|ref|YP_391852.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78364213|gb|ABB42178.1| MotA/TolQ/ExbB family protein [Thiomicrospira crunogena XCL-2]
Length = 263
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 101/269 (37%), Gaps = 15/269 (5%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+ ++G + + + Y N + +++V G + +++ + + ++
Sbjct: 6 TALMGYILGLGLFVLAVYLNTDNYLMFFSLSSLLMVLGGTIAVAMISFEGINVLLAMKAI 65
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + + +L ++K + EN + VL +E
Sbjct: 66 FATLATAKVNTRKLYNDVGVLIDWAIIVRKEGLRKFENTV--------------VLSKDE 111
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++ G + ++ L++ + ++ + M + PA G++G +
Sbjct: 112 DQNFLGQSFLYLLSGY-KGQKLMTLLEHTRQSMYDRQMMQAKVLMTMASAAPAFGMIGTL 170
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ + ++ P +G + V+L TL G++++ + P +I+ + + I+
Sbjct: 171 VGLVIMLNSMEGDPSKIGGGLAVALLTTLYGVLMAQLIFKPAARKIEQKQDLEAYRNHIL 230
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++ G P + L +
Sbjct: 231 TEGILLMAEGGSPTHIQDAMNAFLDPRYQ 259
>gi|330940675|gb|EGH43693.1| flagellar motor protein [Pseudomonas syringae pv. pisi str. 1704B]
Length = 194
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 84/215 (39%), Gaps = 22/215 (10%)
Query: 51 LKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIF 110
+ + + I + D + +K E
Sbjct: 1 MNAFMRAMKIIHWIIFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET----------- 46
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGE 170
+ ++E + +++++ G A I ++++ + ++ MG
Sbjct: 47 ------VADSEPDGYSRKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGG 99
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
P +GI+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+
Sbjct: 100 YAPTVGIIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAI 158
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVL 265
+Q R ++ + L++ G P+ + +
Sbjct: 159 AHRQARYREMLLEGLLSIAEGENPRSIELKLQGFM 193
>gi|321445152|gb|EFX60610.1| hypothetical protein DAPPUDRAFT_342410 [Daphnia pulex]
Length = 133
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IIG +++ CI G + A GGN ++++ PFE+ + GA +G F+ N +KV+K +
Sbjct: 1 MFVIIGWAVSMACIFGVYIAHGGNMGVILKALPFEVTTILGAAIGAFLANNQMKVVKAAV 60
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
L F + Y ++L L+Y ++ +K E ++DP++S +F PTV
Sbjct: 61 AGLGRCFKGSKFSKARYMELLALMYDILQKARKEGLMSIEKDVEDPHSSALFQKYPTVGN 120
Query: 119 NNELTT 124
++ +T
Sbjct: 121 DHHVTE 126
>gi|152990730|ref|YP_001356452.1| flagellar motor protein MotA [Nitratiruptor sp. SB155-2]
gi|151422591|dbj|BAF70095.1| flagellar motor protein MotA [Nitratiruptor sp. SB155-2]
Length = 252
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 100/261 (38%), Gaps = 21/261 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+ T+IGL +I GG+P I I+IV G G + A PLK + +
Sbjct: 3 LGTLIGLGGAWALVIISIVL-GGSPGAFINGPSILIVIGGGFAAALAAFPLKDFLNGVKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++F D++ L +K E ID Y
Sbjct: 62 IKKVFKPTVPEP---LDLIDFLVDATKKARKEGILALEGDIDQFYER------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + MRM+I G +IE + I + +GE PA+G++G
Sbjct: 106 --DKILGNLMRMLIDGQ-NIEDIEANFENAIAQEDSQLDTEIKVWDSLGELFPALGMIGT 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NLS P LG + V++ TL G IL+ LC P+ ++K +
Sbjct: 163 LIGLIQMLQNLSD-PAALGPGMAVAMITTLYGAILANILCIPIAKKLKYYKDLLLLYKES 221
Query: 241 VKKALIAYMNGAIPQVAIEYG 261
+ + G P +
Sbjct: 222 YILTIKSIEKGVNPNTLQQQL 242
>gi|229069279|ref|ZP_04202569.1| Chemotaxis protein, MotA [Bacillus cereus F65185]
gi|229078909|ref|ZP_04211461.1| Chemotaxis protein, MotA [Bacillus cereus Rock4-2]
gi|228704323|gb|EEL56757.1| Chemotaxis protein, MotA [Bacillus cereus Rock4-2]
gi|228713766|gb|EEL65651.1| Chemotaxis protein, MotA [Bacillus cereus F65185]
Length = 277
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 25/243 (10%)
Query: 16 GGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG + I+IV G V+A IK IF +
Sbjct: 35 AAIMLGGGGIKAFKNFLDISSILIVIGGTTATIVVAYRFGEIK---KYTKSIFTVLHRRE 91
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ + L KK E + N FI +R+
Sbjct: 92 EDLEQLTDLFVDFSKKSKKNGLLSLEVDGEQVDN-----------------PFIQKGIRL 134
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 135 MLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +GT + V++ TL G +L+ + PL ++ + V +A+ G
Sbjct: 194 DT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQ 252
Query: 253 IPQ 255
IP
Sbjct: 253 IPS 255
>gi|307825894|ref|ZP_07656109.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307733013|gb|EFO03875.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 277
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 100/247 (40%), Gaps = 22/247 (8%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLY 83
+P +VIV G + ++ PL+ IK S S+ IF Y++L + + +
Sbjct: 47 DPLSFFNLTGLVIVIGGTIAAIFLSYPLRDIKHSLKSIKLIFFYESLNPQREANEIIAVS 106
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
+ +N K + T + I++PY T F ++V + +I
Sbjct: 107 QMWFNKDKLAIENTIDSINNPYLKTGFQ---------------------LVVDHTPVEDI 145
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-QSPKILGTAI 202
+L+ I + ++ + PA G++G ++ +I + + + + ++
Sbjct: 146 LSLLKWRIARLRAKEKAEASIFYSLAAYSPAFGMLGTLIAMINMLQIIELKDIAGISYSM 205
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
G +L T G+I++ + NP+ +++ ++ + +V + + + P E +
Sbjct: 206 GTALITTFYGLIMANLIFNPIAIKLERRTEQRIMIMSMVMEGITLIADRRSPSFVRETLK 265
Query: 263 KVLPLSE 269
+ +
Sbjct: 266 SFIMHYD 272
>gi|228938841|ref|ZP_04101441.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228971722|ref|ZP_04132343.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978331|ref|ZP_04138708.1| Chemotaxis protein, MotA [Bacillus thuringiensis Bt407]
gi|228781348|gb|EEM29549.1| Chemotaxis protein, MotA [Bacillus thuringiensis Bt407]
gi|228787812|gb|EEM35770.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820690|gb|EEM66715.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 277
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 91/243 (37%), Gaps = 25/243 (10%)
Query: 16 GGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG + I+IV G V+A IK IF +
Sbjct: 35 AAIMLGGGGIKAFKNFLDISSILIVIGGTTATIVVAYRFGEIK---KYTKSIFTVLHRRE 91
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ + L KK E + N FI +R+
Sbjct: 92 EDLEQLTNLFVDFSKKSKKNGLLSLEVDGEQVDN-----------------PFIQKGIRL 134
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 135 MLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +GT + V++ TL G +L+ + PL+ ++ + V +A+ G
Sbjct: 194 DT-SQIGTGMAVAMLTTLYGSVLANMIAIPLSEKVYRGIEDLYTEKKFVIEAISELYRGQ 252
Query: 253 IPQ 255
IP
Sbjct: 253 IPS 255
>gi|229189824|ref|ZP_04316835.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 10876]
gi|228593632|gb|EEK51440.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 10876]
Length = 277
Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 90/243 (37%), Gaps = 25/243 (10%)
Query: 16 GGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG + I+IV G V+A IK IF +
Sbjct: 35 AAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK---KYTKSIFTVLHRRE 91
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ + L KK E + N FI +R+
Sbjct: 92 EDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN-----------------PFIQKGIRL 134
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G E++ ++ ++ID +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 135 MLSGYDED-ELKEVLLKDIDTEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +GT + V++ TL G +L+ + PL ++ + V +A+ G
Sbjct: 194 DT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQ 252
Query: 253 IPQ 255
IP
Sbjct: 253 IPS 255
>gi|78484703|ref|YP_390628.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78362989|gb|ABB40954.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
Length = 275
Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 102/290 (35%), Gaps = 36/290 (12%)
Query: 1 MSTIIGLFITILCIIGGFY-AMGGNP-YILIQPFEIVIVAGAGLGGFVMANPLKVIKDSG 58
++T+IG+F+ ++ +I + G+ +++V G ++ PL +
Sbjct: 4 LATLIGVFLGLVILILSMFDFEKGHLLSAFFNLQGLLVVLGGTFAATLINYPLNQMGCFF 63
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE 118
+++F + ++ + + L + K E ID +
Sbjct: 64 RGFVKVFASEPHSENEAIEQIVYLSHINQ---KKGILALEKEIDLISDK----------- 109
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
F+ + ++V + + ++ ++ + + ++M PA G++
Sbjct: 110 ------FLRFALSEMMV-YRDIHHLSTSLENHLNSMRLRHVGCQDVFNNMASYAPAFGMM 162
Query: 179 GAILGIIKAMGN-------------LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
G ++G+I M L +G++L T G++L+ + P+
Sbjct: 163 GTVMGLIIMMTAQVTGAEASASGDASGDMLSSLLQGMGLALVTTFYGVLLANFVFIPVAG 222
Query: 226 QIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++K + I+ ++ P + E + + +EI
Sbjct: 223 KLKVLSDAEALKNEILMFGILGLKKEQSPLLLRESLTAFVNEKNKQKLEI 272
>gi|59713369|ref|YP_206144.1| flagellar motor protein MotA2 [Vibrio fischeri ES114]
gi|59481617|gb|AAW87256.1| flagellar motor protein MotA2 [Vibrio fischeri ES114]
Length = 260
Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 95/269 (35%), Gaps = 16/269 (5%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
STI GL + +IG + + +IV G L +++ +I S L
Sbjct: 5 STITGLLMAFGVLIGAVTMSTDKYMLFVSLSSFLIVLGGTLTAALISYSYPLILSSFKGL 64
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
L + +K + + EN ++D N +
Sbjct: 65 LVNLLDETNVTKFKHASIKRTVEWNQIFRSSGMSGLENSLND---------------NEK 109
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
FI + +I G + E++ L+DE +++ ++ MG P G++G +
Sbjct: 110 NDPFIRLGVELIGTGY-KGEELKKLLDESNHSQYKQEMTQAEVLNSMGTYAPGFGMIGTL 168
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G+I + NL+ LG + V+L TL GI+L+ P +I +
Sbjct: 169 IGLIIMLDNLNGDMAALGNGLAVALLTTLYGILLAQVFFKPAAIRISRRVNTNFDNREMQ 228
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
A + + LP +R
Sbjct: 229 INAFVLMTEKRPDLYLQDSMNVHLPFKKR 257
>gi|288960026|ref|YP_003450366.1| chemotaxis protein [Azospirillum sp. B510]
gi|288912334|dbj|BAI73822.1| chemotaxis protein [Azospirillum sp. B510]
Length = 311
Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 95/249 (38%), Gaps = 21/249 (8%)
Query: 22 GGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
GG+ + P ++IV G L + L + + + + ++ L V +
Sbjct: 71 GGSARAFLDPPSLLIVLGGTLAVTTASFSLGDVAVAWKNAAAVLVHQTLDPKG---VARQ 127
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
+ +L ++ N + + + T I + +
Sbjct: 128 VLLLAEAARRAGPETLRNVLPELRAEPFL---------HRSVTLITEGL--------PPD 170
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
IE ++ E++ K + E PA+G++G ++G+++ +G+LS P +G A
Sbjct: 171 AIERMLTGEVEATAGGHGKSAGVLRRASEVAPAMGLIGTLVGLVQMLGSLSD-PSAIGPA 229
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
+ ++L T G +L + +PL ++++ + + + ++ P+
Sbjct: 230 MALALLTTFYGAVLGNVVLSPLAAKVERAAEEDALVKTLYTIGAVSIARQENPRRLEMLL 289
Query: 262 RKVLPLSER 270
VLP +R
Sbjct: 290 NAVLPPGKR 298
>gi|206970702|ref|ZP_03231654.1| putative chemotaxis protein MotA [Bacillus cereus AH1134]
gi|218231406|ref|YP_002366412.1| flagellar motor protein MotP [Bacillus cereus B4264]
gi|218896659|ref|YP_002445070.1| putative chemotaxis protein MotA [Bacillus cereus G9842]
gi|228900308|ref|ZP_04064538.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 4222]
gi|228907360|ref|ZP_04071218.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 200]
gi|228958006|ref|ZP_04119743.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228964709|ref|ZP_04125816.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|229109184|ref|ZP_04238783.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-15]
gi|229127053|ref|ZP_04256052.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-Cer4]
gi|229144339|ref|ZP_04272745.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST24]
gi|229149928|ref|ZP_04278156.1| Chemotaxis protein, MotA [Bacillus cereus m1550]
gi|229178136|ref|ZP_04305507.1| Chemotaxis protein, MotA [Bacillus cereus 172560W]
gi|296502309|ref|YP_003664009.1| flagellar motor protein MotP [Bacillus thuringiensis BMB171]
gi|206734338|gb|EDZ51508.1| putative chemotaxis protein MotA [Bacillus cereus AH1134]
gi|218159363|gb|ACK59355.1| putative chemotaxis protein MotA [Bacillus cereus B4264]
gi|218545199|gb|ACK97593.1| putative chemotaxis protein MotA [Bacillus cereus G9842]
gi|228605266|gb|EEK62716.1| Chemotaxis protein, MotA [Bacillus cereus 172560W]
gi|228633609|gb|EEK90210.1| Chemotaxis protein, MotA [Bacillus cereus m1550]
gi|228639126|gb|EEK95550.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST24]
gi|228656406|gb|EEL12245.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-Cer4]
gi|228674194|gb|EEL29439.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-15]
gi|228794959|gb|EEM42458.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228801713|gb|EEM48593.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228852221|gb|EEM97017.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 200]
gi|228859343|gb|EEN03773.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 4222]
gi|296323361|gb|ADH06289.1| flagellar motor protein MotP [Bacillus thuringiensis BMB171]
Length = 277
Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 25/243 (10%)
Query: 16 GGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG + I+IV G V+A IK IF +
Sbjct: 35 AAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK---KYTKSIFTVLHRRE 91
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ + L KK E + N FI +R+
Sbjct: 92 EDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN-----------------PFIQKGIRL 134
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 135 MLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +GT + V++ TL G +L+ + PL ++ + V +A+ G
Sbjct: 194 DT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQ 252
Query: 253 IPQ 255
IP
Sbjct: 253 IPS 255
>gi|229043481|ref|ZP_04191191.1| Chemotaxis protein, MotA [Bacillus cereus AH676]
gi|228725859|gb|EEL77106.1| Chemotaxis protein, MotA [Bacillus cereus AH676]
Length = 277
Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 25/243 (10%)
Query: 16 GGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG + I+IV G V+A IK IF +
Sbjct: 35 AAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK---KYTKSIFTVLHRRE 91
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ + L KK E + N FI +R+
Sbjct: 92 EDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN-----------------PFIQKGIRL 134
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 135 MLSGYDED-ELKEVLFKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +GT + V++ TL G +L+ + PL ++ + V +A+ G
Sbjct: 194 DT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQ 252
Query: 253 IPQ 255
IP
Sbjct: 253 IPS 255
>gi|228952107|ref|ZP_04114202.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228807639|gb|EEM54163.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 277
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 91/243 (37%), Gaps = 25/243 (10%)
Query: 16 GGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG + I+IV G V+A IK IF +
Sbjct: 35 AAIMLGGGGIKAFKNFLDISSILIVIGGTTATIVVAYRFGEIK---KYTKSIFTVLHRRE 91
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ + L N KK E + N FI +R+
Sbjct: 92 EDLEQLTDLFVDFSKNSKKNGLLSLEVDGEQVDN-----------------PFIQKGIRL 134
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 135 MLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +GT + V++ TL G +L+ + PL ++ + V +A+ G
Sbjct: 194 DT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQ 252
Query: 253 IPQ 255
IP
Sbjct: 253 IPS 255
>gi|83593141|ref|YP_426893.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83576055|gb|ABC22606.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 266
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 103/276 (37%), Gaps = 16/276 (5%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++TI+G+ N + ++ ++V G L ++ + + + S
Sbjct: 3 LATILGVLFGFGLFCLSVILSTDNYLLFLKGESFIMVVGGTLAAAFVSFEPRYVVSALRS 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
++ I + + + + Y ++K E F S
Sbjct: 63 MVAILFNHEVSRSILTHEVGRVIRWGYIIQKNGLPGLEADAQKVRKQDRFLSY------- 115
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +++ G + E+ ++ ++ ++ P + +MG + PA G++G
Sbjct: 116 --------GLDLVVTGYTGT-EVREILANTVENTFQRQVVPAEILRNMGGTAPAFGMIGT 166
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I ++ +P +G + V+LT TL G++ + L P S++K +
Sbjct: 167 LVGLIIMFDSMGSNPGSMGAGLAVALTATLYGLLSARLLFLPAASKVKQREELIRYRNYL 226
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIV 276
+ + L P+ + L S SI+ V
Sbjct: 227 LAEGLALLAERKSPRYIQDRMNSYLDPSIHFSIDRV 262
>gi|319790062|ref|YP_004151695.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
gi|317114564|gb|ADU97054.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
Length = 253
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 21/265 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ L II GG+P I ++I G G+ + P+ +
Sbjct: 3 IATLIGIGGAFLLIIVSIVI-GGSPGAFINVPSLLITVGGGIAAGMAGFPMGEFIGGLKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L+ +++ L + +K E+ ID Y
Sbjct: 62 ILKTLNPGMPNP---IELIDFLTEVAKKARKEGILALESDIDSFYAK------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ D MRM+I G EI++ + + I + +G+ PA G++G
Sbjct: 106 --DPFLGDIMRMLIDG-LEIEEIKSTAESAMAQIDQKLSTEVAVWESLGDLFPAFGMIGT 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NLS P LG + V++ TL G IL+ +LC P++ ++K + +
Sbjct: 163 LIGLIQMLQNLSD-PSALGPGMAVAMITTLYGAILANTLCIPVSKKLKYYKDLKLLFLEA 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
A G P V + +L
Sbjct: 222 YLLTAEAIEKGLNPNVLRQKLAGLL 246
>gi|56384264|gb|AAV85782.1| MotA [Azospirillum brasilense]
Length = 288
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 106/270 (39%), Gaps = 23/270 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T++GL + I A GG+ + P ++IV G L + L + +
Sbjct: 26 MATLVGLAAAAVV-IFVAMASGGSLRAFVDPPSLIIVLGGTLAVTTASFSLPDVAIAWRD 84
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + LL + RN VL
Sbjct: 85 AGAVLIHRTSDPRGVARQVLLLAEAARRAPETLRN--------------------VLPEL 124
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +F+ + ++ G +IE ++ E++ K+K + E PA+G++G
Sbjct: 125 KHESFLHRSVTLVAEG-LPPDDIERMLIGEVEASGAGKVKSAGVLRRASEVAPAMGLIGT 183
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+++ +G+L+ P +G A+ ++L T G +L PL ++++ T + + +
Sbjct: 184 LVGLVQMLGSLND-PSSIGPAMALALLTTFYGAVLGNVALAPLAAKVERTAEEDALVKTL 242
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++ P+ VLP +R
Sbjct: 243 YTIGAVSIARQENPRRLEMLLNAVLPPGKR 272
>gi|75760653|ref|ZP_00740681.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74491867|gb|EAO55055.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 277
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 91/243 (37%), Gaps = 25/243 (10%)
Query: 16 GGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG + I+IV G V+A IK S+ + +
Sbjct: 35 AAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKQYTKSIFTVLHRREEDL 94
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ D L KK E + N FI +R+
Sbjct: 95 EQLTD---LFVDFSKKSKKHGLLSLEVDGEQVDN-----------------PFIQKGIRL 134
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 135 MLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +GT + V++ TL G +L+ + PL ++ + V +A+ G
Sbjct: 194 DT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQ 252
Query: 253 IPQ 255
IP
Sbjct: 253 IPS 255
>gi|317407353|gb|EFV87319.1| outer membrane proton channel [Achromobacter xylosoxidans C54]
Length = 288
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 95/269 (35%), Gaps = 22/269 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG + +L ++ NP + + IV G +A PL + +
Sbjct: 4 STVIGAVVGLLTLVIVIALAATNPGMYFNLPGLAIVLGGTCAALFIAYPLSEVMRVFKLV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ +F Q + L + L N + + +P
Sbjct: 64 VTVFRSDQHDQQRDIEELVNMAQLWMNTDVHKVEQELKKVSNP----------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++II IE L+ + + ++ M PA G++G +
Sbjct: 107 ---FLRTGVQLIIDNTPEDQIIE-LLQWRVARLKAREMAEAQMFRVMATFAPAFGMLGTL 162
Query: 182 LGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I M L S +G + + L T GI+L+ +C P+ +++ ++ +
Sbjct: 163 VGLINLMSVLGDGSMTTIGQQLAIGLMTTFYGILLANLVCKPIAVKLERRTARRVESMNM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
V + + P V E + E
Sbjct: 223 VLQGISMMCEKRGPAVVRETLNSFVMHVE 251
>gi|317153139|ref|YP_004121187.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316943390|gb|ADU62441.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 290
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 99/272 (36%), Gaps = 23/272 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG+ +++L +G F G ++V +++ P I+++
Sbjct: 6 LIGVVLSLLLFVGSFLLTGA-ASAYWNLAAFLVVVSGLTAAMLVSYPTAHIRNAFRVARN 64
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ G T +++ L L K E E+ E++
Sbjct: 65 AYAN---GHATSEEIVNTLLDLSVKSKVDGVLSLER-----------------SEHREIS 104
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+F+ + + +++ EI ++ E+ + + M PA G+ G+++G
Sbjct: 105 SFLQNGLILLVDNYKEE-EIREALNSEMAFFNLRRQQSERFFQTMARMAPAFGVAGSVIG 163
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I + ++ + ++ I V+ TL G++LS + +P+ I + + +V +
Sbjct: 164 LIGLLMGINDT-AVILKNIPVAFISTLYGLVLSNLVFSPIAENINYSTRVELLNQKLVLE 222
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++A L SER
Sbjct: 223 GIVAISKEQNSYKLERKLASFLSPSEREGKTE 254
>gi|228920438|ref|ZP_04083783.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839068|gb|EEM84364.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 277
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 91/243 (37%), Gaps = 25/243 (10%)
Query: 16 GGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG + I+IV G V+A IK S+ + +
Sbjct: 35 AAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKKYTQSIFTVLHRREENL 94
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ D L KK E + N FI +R+
Sbjct: 95 EQLTD---LFVDFSKKSKKHGLLSLEVDGEQVDN-----------------PFIQKGIRL 134
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 135 MLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ 193
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +GT + V++ TL G +L+ + PL ++ + V +A+ G
Sbjct: 194 DT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQ 252
Query: 253 IPQ 255
IP
Sbjct: 253 IPS 255
>gi|229138427|ref|ZP_04267016.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST26]
gi|228644964|gb|EEL01207.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST26]
Length = 240
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 92/245 (37%), Gaps = 25/245 (10%)
Query: 14 IIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKAL 70
+I GG + I+IV G V+A IK IF
Sbjct: 1 MIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK---KYTKSIFTVLHR 57
Query: 71 GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
++ + L KK E + N FI +
Sbjct: 58 KEEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN-----------------PFIQKGI 100
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R+++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + N
Sbjct: 101 RLMLSGYDED-ELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGLIIMLQN 159
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
L + +GT + V++ TL G +L+ + PL ++ + V +A+
Sbjct: 160 LQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYR 218
Query: 251 GAIPQ 255
G IP
Sbjct: 219 GQIPS 223
>gi|209964121|ref|YP_002297036.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
gi|7025358|gb|AAF35848.1|AF220003_2 polar flagellar motor protein MopA [Rhodospirillum centenum]
gi|209957587|gb|ACI98223.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
Length = 301
Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 91/256 (35%), Gaps = 21/256 (8%)
Query: 17 GFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC 76
A+GG+ + IV G + ++ ++ + +G LL
Sbjct: 64 AALALGGSLGAFFNLPSVAIVLGGTVAVTAVSFSVRDVAAAGRLLLGAVTRTVHDPQG-- 121
Query: 77 DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG 136
V + + L ++ + P++ L I +IV
Sbjct: 122 -VARYVLQLADIARRNGPLALQP------------LAPSLAAEPVLQRSIE-----MIVD 163
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
+ ++E ++ EI+ + E PA+G++G ++G+++ + NL Q P
Sbjct: 164 GLPADDVERILRTEIEADQARARAGAAVLRRAAEVAPAMGLIGTLVGLVQMLDNL-QDPA 222
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+G A+ V+L T G +L + +PL ++ Q + + + P+
Sbjct: 223 SIGPAMAVALLTTFYGAVLGSMVLSPLAGKVDRNAEVQALVSSLYMLGAGSIARQENPRR 282
Query: 257 AIEYGRKVLPLSERPS 272
VLP R S
Sbjct: 283 LEILINTVLPPELRLS 298
>gi|242279926|ref|YP_002992055.1| MotA3 [Desulfovibrio salexigens DSM 2638]
gi|242122820|gb|ACS80516.1| MotA3 [Desulfovibrio salexigens DSM 2638]
Length = 289
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 104/282 (36%), Gaps = 26/282 (9%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG+ + I G + + G + + IV +++ P++ ++++ + +
Sbjct: 6 LIGVIVA-ASIFAGSFWLSGGIALYWNAAALAIVLSGLAVAVLLSYPVEQLREAFRVVQD 64
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
+ + + ++++ L L K E +
Sbjct: 65 TYSSRLATHE---EIVETLLDLSVRSKMDGMLSLEKAGE-----------------KTTI 104
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+F+ + M++V N EI++ + E+ + + M PA G+ G+++G
Sbjct: 105 SFLRHAL-MLLVDNFEEDEIKDCLKTEMSFFNMRRGESERVFQSMARFAPAFGVAGSVIG 163
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I + + +P ++ I V+ TL G+I S + P+ ++ + ++
Sbjct: 164 LIGLLMGI-DNPAMILKHIPVAFISTLYGVIFSNMIFAPMAETVRCRTRNELINQKMILD 222
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+IA N P L + +R E A+ +
Sbjct: 223 GVIAIKNEQNPYKLERKLAAFLVVDDR---EEKAEALRNITR 261
>gi|30019772|ref|NP_831403.1| flagellar motor protein MotP [Bacillus cereus ATCC 14579]
gi|29895317|gb|AAP08604.1| Chemotaxis motA protein [Bacillus cereus ATCC 14579]
Length = 254
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 25/243 (10%)
Query: 16 GGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
GG + I+IV G V+A IK IF +
Sbjct: 12 AAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK---KYTKSIFTVLHRRE 68
Query: 73 DTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM 132
+ + L KK E + N FI +R+
Sbjct: 69 EDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN-----------------PFIQKGIRL 111
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G E++ ++ ++I+ +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 112 MLSGYDED-ELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ 170
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +GT + V++ TL G +L+ + PL ++ + V +A+ G
Sbjct: 171 DT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQ 229
Query: 253 IPQ 255
IP
Sbjct: 230 IPS 232
>gi|229155298|ref|ZP_04283409.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 4342]
gi|228628223|gb|EEK84939.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 4342]
Length = 245
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 92/245 (37%), Gaps = 25/245 (10%)
Query: 14 IIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKAL 70
+I GG + I+IV G V+A IK IF
Sbjct: 1 MIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIK---KYTKSIFTVLHR 57
Query: 71 GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
++ + L KK E + N FI +
Sbjct: 58 REEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDN-----------------PFIQKGI 100
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
++++ G E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + N
Sbjct: 101 QLMLSGY-DEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQN 159
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
L + +GT + V++ TL G +L+ + PL ++ + V +A+
Sbjct: 160 LQDT-SQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYR 218
Query: 251 GAIPQ 255
G IP
Sbjct: 219 GQIPS 223
>gi|83590575|ref|YP_430584.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
gi|83573489|gb|ABC20041.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
Length = 253
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 47/257 (18%), Positives = 100/257 (38%), Gaps = 22/257 (8%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++I+GL I II G + LI I+I+ G +G + PL+ +
Sbjct: 3 LASILGLATAIAAIIIALTLEGNSLASLINLPAIIIILGGTIGATAFSYPLRELTRVPGL 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L ++F + +++ L L ++ E+
Sbjct: 63 LGQVF---QDNHADFENIVNTLVDLAETARREGLLALESR-----------------AQQ 102
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ + + G EI +M+ EI + G P +GI+G
Sbjct: 103 FSDPLLRHGLSFAVDG-IDPEEIRRIMENEIMRRQQDYKTGAGIFETAGGYAPTMGIIGT 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G++ + N+S + L AI V+ TL GI + + P+ +++K+ ++ + I
Sbjct: 162 VIGLVHVLSNISDT-TKLAAAIAVAFLATLYGIASANIIWLPMAAKLKTRAGEKMVVDQI 220
Query: 241 VKKALIAYMNGAIPQVA 257
+ + ++ + G P++
Sbjct: 221 IMEGILGIVQGKNPRLI 237
>gi|311106777|ref|YP_003979630.1| MotA/TolQ/ExbB proton channel family protein 2 [Achromobacter
xylosoxidans A8]
gi|310761466|gb|ADP16915.1| MotA/TolQ/ExbB proton channel family protein 2 [Achromobacter
xylosoxidans A8]
Length = 296
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 96/269 (35%), Gaps = 22/269 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG + +L ++ +P + I + IV G +A PL + +
Sbjct: 4 STVIGAAVGLLTLVIVVALAATDPGMYINLPGLAIVLGGTAAAVFIAYPLSEVLRVFKLV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F Q + L + L N + + +P
Sbjct: 64 RTVFRNDQHDQQRDIEELVSMAQLWMNTDVRKVEQELKKVSNP----------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++II IE L+ + + + M PA G++G +
Sbjct: 107 ---FLRTGVQLIIDNTPEDQIIE-LLQWRVARLRAREQAEAQMFRVMATFAPAFGMLGTL 162
Query: 182 LGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I M L S +++G + + L T GI+L+ +C P+ +++ ++ +
Sbjct: 163 VGLINLMSVLGDGSMQMIGQQLAIGLMTTFYGILLANLVCKPIALKLERRTARRVESMNM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
V + + P V E + E
Sbjct: 223 VLQGIAMMCEKRGPAVVRETLNSFVMHVE 251
>gi|330872239|gb|EGH06388.1| flagellar motor protein MotA [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 113
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 172 LPAIGIVGAILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
+P GIV A+LGI+ M +L S +G +G +L GT GI+ +Y PL + +
Sbjct: 1 MPGFGIVAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATCLAHD 60
Query: 231 RLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
++ +Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 61 AKEEMNVYESIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 111
>gi|325294744|ref|YP_004281258.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065192|gb|ADY73199.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 253
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 104/265 (39%), Gaps = 21/265 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ L II G+P I ++I G G+ + PL + +
Sbjct: 3 IATLIGIAGAFLLIIISIVIG-GSPGAFINVPSLLITVGGGIAAGMAGFPLGEFINGFKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L+ + + L + +K E+ ID Y
Sbjct: 62 ILKAINPGMPNP---IETIDFLTDVAKKARKEGILALESDIDAFYGR------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+F D MRM+I G EI++ + + I + +G+ PA G++G
Sbjct: 106 --DSFFGDVMRMLIDG-LEIEEIKSTAESSMAQIEQKLSTEVAVWETLGDLFPAFGMIGT 162
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
++G+I+ + NLS P LG + V++ TL G IL+ LC P+ ++K + +
Sbjct: 163 LIGLIQMLQNLSD-PSALGPGMAVAMITTLYGAILANVLCIPVAKKLKYYKDLRLLYLEA 221
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
A G P + + +L
Sbjct: 222 YLLTAEAIEKGLNPNLLKQKLAGLL 246
>gi|150388138|ref|YP_001318187.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
gi|149948000|gb|ABR46528.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
Length = 280
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 117/280 (41%), Gaps = 24/280 (8%)
Query: 7 LFITILCIIGGFYAMGG-NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF 65
+ I +L I+ +G + I+ + I+ L M+ PL+++ ++ + E F
Sbjct: 19 VVIAVLMIVVAQALIGTMSLSIVFNVTALQIIFAGILISVFMSFPLEILTNTVKLVKESF 78
Query: 66 GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTF 125
Y + + +Y L +KK + ID N TF
Sbjct: 79 T----NDINYDETIHKIYELTVKIKKKGVLSIQAEIDQEEN-----------------TF 117
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D M +++ RS IE+++D +I+ K ++ ++ + PA G++G ++G+I
Sbjct: 118 LRDAM-ILLNDYKRSDAIEDILDNDIESRQMNLYKCHNVLNMIAHIAPAFGLIGTLVGMI 176
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ N+S P + + +L TL G +++ + PL +++K ++ Y I+K+ +
Sbjct: 177 GLLANIS-IPDQIMNNMAAALVSTLYGSLIANIIAVPLMARLKEHIEQRVLQYRIIKEGI 235
Query: 246 IAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNH 285
+ + + +L R AQE ++
Sbjct: 236 LLIAQEDTARNVFDKMNVMLKEENRLIYPRRAQEERKHES 275
>gi|163781626|ref|ZP_02176626.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
gi|159882846|gb|EDP76350.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
Length = 240
Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 100/247 (40%), Gaps = 20/247 (8%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
+GG+P I + IV G G+ + PLK S+ + F +K +
Sbjct: 6 IVVGGSPAAFINIPSLFIVVGGGMAAALGGFPLKDFIRGVSSIKDAFLWKPP---DALET 62
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
++ L + +++ E+ I+ E + D +RM++ G
Sbjct: 63 VEFLSEIATKVRREGILALESEIE---------------LYYERDPLLGDMIRMLVDG-L 106
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
EI+ + I + + + + PA G++G ++G+I+ + NL+ P L
Sbjct: 107 ELEEIKISAEGAIAQVDDKLGTNVAVWEKLADLFPAFGMIGTLVGLIQMLKNLND-PSAL 165
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G + V+L TL G IL+ + P+++++K + + I A+ G P +
Sbjct: 166 GPGMAVALITTLYGAILANAFAIPISNKLKKIKDTEVLFKNIYLMAIEGIQKGVNPNILR 225
Query: 259 EYGRKVL 265
+ +L
Sbjct: 226 QELSIML 232
>gi|15606306|ref|NP_213685.1| flagellar motor protein MotA [Aquifex aeolicus VF5]
gi|6225709|sp|O67122|MOTA_AQUAE RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|2983506|gb|AAC07083.1| flagellar motor protein MotA [Aquifex aeolicus VF5]
Length = 254
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 21/257 (8%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
TIIG+ L I+ G+ I I IV G G+ + A PLK +++
Sbjct: 5 TIIGIIAAFLLILISILIG-GSITAFINVPSIFIVVGGGMAAAMGAFPLKDFIRGVLAIK 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ F +K DV++ + + ++K E I+ +
Sbjct: 64 KAFLWKPP---DLNDVIETIGEIASKVRKEGILALEGDIE---------------LYYQK 105
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
+ D +RM++ G +I+ + + + + + + PA G++G ++
Sbjct: 106 DPLLGDMIRMLVDG-IDINDIKATAEMALAQLDEKMSTEVAVWEKLADLFPAFGMIGTLI 164
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+I+ + NL+ P LG + V+L TL G IL+ + P+ +++K + + + I
Sbjct: 165 GLIQMLRNLND-PSALGPGMAVALITTLYGAILANAFAIPVANKLKKAKDMEVLVKTIYI 223
Query: 243 KALIAYMNGAIPQVAIE 259
+A+ G P V +
Sbjct: 224 EAIEKIQKGENPNVVKQ 240
>gi|289806506|ref|ZP_06537135.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 100
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 61/100 (61%)
Query: 172 LPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
+PA GIV A++G++ A+ + + LG I ++ GT LGI+L+Y +PL + ++
Sbjct: 1 MPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKS 60
Query: 232 LKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERP 271
+ ++ VK L++ +NG P +A+E+GRK L SERP
Sbjct: 61 AETTKMMQCVKITLLSNLNGYAPPIAVEFGRKTLYSSERP 100
>gi|226944840|ref|YP_002799913.1| flagellar motor protein [Azotobacter vinelandii DJ]
gi|226719767|gb|ACO78938.1| flagellar motor protein [Azotobacter vinelandii DJ]
Length = 273
Score = 121 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 97/267 (36%), Gaps = 26/267 (9%)
Query: 2 STIIGLF--ITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV 59
ST+IG+ + +L + + A +P + + + IV ++ PL +
Sbjct: 4 STLIGMLASVALLAVTLVYSAE--DPALFVDLPSLGIVVVGTFAATFISYPLGEVLRIFT 61
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
+ + + L + + L + L G E + N
Sbjct: 62 LIATVMRNERLYTEDDIEELVKISRL---WAGGDLRAVERELAQVRN------------- 105
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ ++++I +I L+ I + ++ M PA G++G
Sbjct: 106 ----PFLRTGVQLVID-MTPEDDILELLQWRISRLRAKEHAEAQLFRVMAGYAPAFGMLG 160
Query: 180 AILGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
++G++ M L +G + V+L TL G++L+ + P+ +++ ++ L
Sbjct: 161 TLVGLVNLMFLLGDGDVTAIGRQMAVALMTTLYGVLLANLVFKPVAVKLERRTEQRVVLM 220
Query: 239 IIVKKALIAYMNGAIPQVAIEYGRKVL 265
+V + + N P + E +
Sbjct: 221 NMVLQGISMMCNKRNPGLMRETLNSFV 247
>gi|315928503|gb|EFV07808.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
305]
Length = 200
Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 89/220 (40%), Gaps = 22/220 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+STI+G+ + + I G GGNP ++ +IV + + K++K +
Sbjct: 3 LSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAAFCAMTSTHKKIVKAAYKE 62
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +F + + + L ++ E+ + N
Sbjct: 63 LKVVFKGSGVN---LPERIAQLIEFAIIARRDGLLALESRTSEIEN-------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F+ + M M++ G + EI M+ + + + + GE+ P +G+VGA
Sbjct: 106 ---EFLKNAMMMLVDGKSFE-EIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGA 161
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLC 220
+ G+I A+ L +P+ + I + T T+ GI +Y+L
Sbjct: 162 VFGLILAL-KLLDNPQAMAAGISGAFTATVTGIFGAYALF 200
>gi|163857258|ref|YP_001631556.1| putative outer membrane proton channel [Bordetella petrii DSM
12804]
gi|163260986|emb|CAP43288.1| putative outer membrane proton channel [Bordetella petrii]
Length = 301
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 98/265 (36%), Gaps = 22/265 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG+ + + + + + + +V+V G ++ PL+ + +
Sbjct: 4 STLIGIVVALATLATALAFSATDLALYVNLPGLVVVLGGTCAALFISYPLREVVRVFALV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F + L D L + L N + + + +P
Sbjct: 64 RTVFRSEQLDSRRDIDELVAMAQLWMNDDVHKVEQALHKVSNP----------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ ++++I IE L+ I + + M PA G++G +
Sbjct: 107 ---FLRTGVQLVIDHTPEDQIIE-LLQWRIARLRAREHAEAQMFRIMAGFAPAFGMLGTL 162
Query: 182 LGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+G+I M L S ++G + V+L T GI+L+ +C P+ +++ ++ L +
Sbjct: 163 VGLINLMTVLGSGDMALIGQQLAVALMTTFYGILLANLVCKPIAVKLERRTEQRLMLMNM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
V + + P V E +
Sbjct: 223 VLQGIAMMCARRGPAVVRETLNSFM 247
>gi|213024631|ref|ZP_03339078.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 104
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
+ LG I ++ GT LGI+L+Y +PL + ++ + ++ VK L++ +NG
Sbjct: 1 DRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCVKITLLSNLNG 60
Query: 252 AIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
P +A+E+GRK L SERPS + + V + +
Sbjct: 61 YAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQ 97
>gi|293605835|ref|ZP_06688206.1| MotA/TolQ/ExbB proton channel [Achromobacter piechaudii ATCC 43553]
gi|292815748|gb|EFF74858.1| MotA/TolQ/ExbB proton channel [Achromobacter piechaudii ATCC 43553]
Length = 293
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 93/269 (34%), Gaps = 22/269 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
ST+IG + +L ++ + + + + IV G +A PL + +
Sbjct: 4 STLIGAAVGLLTLVIVVALSATDASMYLNLPGLAIVLGGTCAALFIAYPLPEVLRIFKLV 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+F Q + L + L N + + +P
Sbjct: 64 RTVFRNDQHDQQRDIEELVSMAQLWMNTDVHKVEQELKKVSNP----------------- 106
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F+ +++II IE ++ + + + M PA G++G +
Sbjct: 107 ---FLRTGVQLIIDNTPEDQIIE-VLQWRVARLRAREQAEAQMFRVMATFAPAFGMLGTL 162
Query: 182 LGIIKAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ +I M L S ++G + V L T GI+L+ +C P+ +++ ++ +
Sbjct: 163 VALINLMAVLGDGSMTMIGQHLAVGLMTTFYGILLANLICKPIALKLERRTARRVESMNM 222
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
V + + P V E + E
Sbjct: 223 VLQGISMMCEKRGPAVVRETLNSFVLHVE 251
>gi|323698016|ref|ZP_08109928.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323457948|gb|EGB13813.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 297
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 97/272 (35%), Gaps = 23/272 (8%)
Query: 4 IIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLE 63
+IG+ ++++ G F G ++V +++ P+K + ++
Sbjct: 6 LIGIVLSLIIFAGSFLLTGA-AGAYFNLAAFLVVISGLSAAMLISYPVKHVVNAFQVAKN 64
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
++ + +++ L L K E N +
Sbjct: 65 VYSNGRTTAE---EIVNTLLDLSVKSKVDGVLSLER-----------------SANKATS 104
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+F+ + +++ EI ++ E+ + + + + PA G+ G+++G
Sbjct: 105 SFMKSGLCLLVDNYKEE-EIRECLNAEMAFFNLRRQQSERFFQTLARTAPAFGVAGSVIG 163
Query: 184 IIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+I + ++ + ++ I V+ TL G+ILS+ + +P+ I + + +V +
Sbjct: 164 LIGLLMGINDT-AVILKNIPVAFISTLYGLILSHLVFSPIAENINYSTRAELLNQKLVME 222
Query: 244 ALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
++A L SER
Sbjct: 223 GIVAISKEQNSYKLERKLASFLSPSEREGKTE 254
>gi|297183086|gb|ADI19230.1| flagellar motor component [uncultured delta proteobacterium
HF0200_14D13]
Length = 321
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 107/262 (40%), Gaps = 21/262 (8%)
Query: 23 GNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLL 82
G ++IV G ++A + ++ F + +D + V + +
Sbjct: 72 GTIARFADLKSLLIVLGGAYAATMIAFRFSDATRAFWYAIQAFR-QGRREDEFLAVYQTV 130
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
M + + T+ I+ +S +L ++ D++ + IV
Sbjct: 131 VN-MCEKRSNNELITDEEIEAVKSS-------------DLRNWLQDFIAVDIVS---EEM 173
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI 202
IE ++ EI++ Y + + MG++ PA G++G ++G+I +G+ S + +
Sbjct: 174 IEEIVRSEIEMYNYRSFEEIDLLEFMGKATPAFGMIGTVVGLILMLGSSSAEGADIAGVM 233
Query: 203 G---VSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
G V+L TL G++LS + P+ S+ + Q L ++++ L+ +P+ A +
Sbjct: 234 GGMSVALITTLYGVLLSQLIFTPIASKRFQLKESQVLLLEMIREGLLYLKRRELPETAAK 293
Query: 260 YGRKVLPLSERPSIEIVAQEVL 281
LP R I Q L
Sbjct: 294 DLIIYLPPKLRKKILSEEQAAL 315
>gi|330903398|gb|EGH33970.1| flagellar motor protein MotA [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 110
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 175 IGIVGAILGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+GI A+LGI+ M +L S +G +G +L GT GI+ +Y PL + + +
Sbjct: 1 MGIGAAVLGIVVTMASLGSGDKAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKE 60
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
+ +Y +K +L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 61 EMNVYEAIKASLVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 108
>gi|163785020|ref|ZP_02179754.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
gi|159879713|gb|EDP73483.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
Length = 181
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 20/198 (10%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++T+IG+ L ++ GG+P + ++IV G GL + + PLK + + +
Sbjct: 3 IATVIGIVGATLLLVISIAL-GGSPLAFVNIPSLLIVVGGGLAASLASYPLKEMINGLKA 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+L+ F + D L ++ +K E+ ID+ Y
Sbjct: 62 VLKAFKPGLPDPVEHID---FLVDVVNKARKNGILALESDIDNFYEK------------- 105
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
F D MRM+I G EI++ D + I + +GE PA G++G
Sbjct: 106 --DPFFGDLMRMLIDGQDIE-EIKSNADTALMKIDQDLSTEVAIWEALGELFPAFGMIGT 162
Query: 181 ILGIIKAMGNLSQSPKIL 198
++G+I+ + NL+ +
Sbjct: 163 LIGLIQMLQNLNDPSALG 180
>gi|167750718|ref|ZP_02422845.1| hypothetical protein EUBSIR_01696 [Eubacterium siraeum DSM 15702]
gi|167656397|gb|EDS00527.1| hypothetical protein EUBSIR_01696 [Eubacterium siraeum DSM 15702]
Length = 145
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 66/138 (47%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M+IV ++++++D+ ID + + PA G++G ++G++ + +
Sbjct: 1 MLIVDANDLDKVKSMLDDAIDFMCERHERGRLFFEKGMSVFPAFGMLGTLVGLVNMLKGM 60
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
L + + V+L T G + S L P+ S +K++ ++ I+++ +++ G
Sbjct: 61 GADSSNLSSGMAVALITTFYGSLFSNVLFAPIASSLKNSHEQELLCMQIIEEGVLSIAAG 120
Query: 252 AIPQVAIEYGRKVLPLSE 269
+ P++ E +L ++
Sbjct: 121 SNPRLIQEKLEFMLAQTD 138
>gi|317133478|ref|YP_004092792.1| MotA/TolQ/ExbB proton channel [Ethanoligenens harbinense YUAN-3]
gi|315471457|gb|ADU28061.1| MotA/TolQ/ExbB proton channel [Ethanoligenens harbinense YUAN-3]
Length = 251
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 94/270 (34%), Gaps = 25/270 (9%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
MS ++GL I + F GGNP +L+ ++V G M P +++D +
Sbjct: 1 MSFVVGL-ICCAALFAAFILGGGNPALLLDGRSALLVVGGMAALGCMGLPGGMLRDRLGA 59
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ + + + L+ L ++ E+
Sbjct: 60 AVLAMRRTESKK-----LEEELFSLARLAREKGLIALED------------------AEP 96
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
++ + ++I G A + +++++ D + M +G G
Sbjct: 97 RVSDALVREGLLLISGGASPETVRAVLEKQADCQKAREHAAQELFERMAYLAIGVGGAGT 156
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L + + + P+ L I +L G + +Y + PL +++++ +Q
Sbjct: 157 LLKTVLMLHRYAG-PQTLAPGIAAALLPVAYGALAAYVVMLPLAARVRAGAERQEIQRQA 215
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSER 270
+ ++A G V E R +L +
Sbjct: 216 AIEGILAVQAGEPMFVVQERLRTILHPIVK 245
>gi|50954412|ref|YP_061700.1| chemotaxis motility protein A [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950894|gb|AAT88595.1| chemotaxis motility protein A [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 295
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 81/233 (34%), Gaps = 27/233 (11%)
Query: 25 PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYI 84
L+ P +++V GA + + + ++ + K D +
Sbjct: 9 VVSLLLPGPMILVFGATIAIGFAGSTITDGVRGFAAIPKALKGKKPNFPATIDSI---VE 65
Query: 85 LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIE 144
L + + + F ++ + G S ++
Sbjct: 66 LADKARCNGLLALDGE-----------------GDRIGDPFFKTALQGLTDGK-DSEDLP 107
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
+L++EEI + + + MG P +GI+G ++ + + NLS SP LG I
Sbjct: 108 DLLEEEIQTRTHAEKNASKYFTTMGGYAPTVGIIGPVVSLAHVLENLS-SPDKLGPMIAS 166
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+ TL G++ + + PL +++ + ++ + + P+V
Sbjct: 167 AFIATLWGLVSANFIWLPLGTRLYRLAELESERMHLIVE-----AGKSAPRVV 214
>gi|255022044|ref|ZP_05294050.1| Flagellar motor component [Acidithiobacillus caldus ATCC 51756]
gi|254968530|gb|EET26086.1| Flagellar motor component [Acidithiobacillus caldus ATCC 51756]
Length = 227
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 74/201 (36%), Gaps = 23/201 (11%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
++ L L + +K + IDD + F+ + +RM + G
Sbjct: 42 IEQLIELAHKSRKYGLLSLDALIDDIED-----------------PFMRNGLRMAVDGTG 84
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+ + + + + G P GI+GA+ G+I+ M +LS P L
Sbjct: 85 TTTIMRT-LRLRLHTQTELDMMAAGLFEAAGGYAPTFGIMGAVTGLIEVMHHLSH-PSEL 142
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
G I + T+ G++L+ C P +++++ +Q + AL + G
Sbjct: 143 GMGIAAAFVSTVYGLVLANVFCIPTANRLRTVIAEQLVARNVFMDALHGIVTGINTL--- 199
Query: 259 EYGRKVLPLSERPSIEIVAQE 279
R +L P+ + E
Sbjct: 200 -ELRTILESYYLPNKKSGETE 219
>gi|34979597|gb|AAQ83843.1| motility protein A [Bacillus subtilis]
Length = 172
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 20/167 (11%)
Query: 16 GGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
G G + L P I+I+ + ++A P K IK +F Q T
Sbjct: 18 VGMVLKGVSLSALANPAAILIILFGTISAVIIAFPGKEIKKVPALFKVLFKENK--QLTI 75
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
++ + ++ E I+D + F+ + + M +
Sbjct: 76 AQLIPMFSQWAQIARREGLLALEASIEDVDD-----------------AFLKNGLSMAVD 118
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
G + + I ++M EE++ + + G P +G++GA+L
Sbjct: 119 GQSAEF-IRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVL 164
>gi|296274016|ref|YP_003656647.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296098190|gb|ADG94140.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 251
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 87/249 (34%), Gaps = 21/249 (8%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T+ G+ I G I + IV G + +K G
Sbjct: 4 TTVGGIGAGWALIALAIMLGGVGFGPYIDIPSVAIVFGGTIAVTAGQFQPSELKRVGAGF 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ + ++++ + +KK + E + E
Sbjct: 64 KIAMNESKV--EPLPELIEKIIFYATEVKKHGVMQIEQKV-----------------LTE 104
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
F + ++++ G + + L++ +++ + S++G + ++G++G +
Sbjct: 105 SNAFFKEAFQLLVDGT-KPDVLVPLLELKLEHMDKRHTSLIGVFSNIGGTAGSMGMIGTL 163
Query: 182 LGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+G++ + NLS P +G A+ V+L TL G ++ + + S++ + ++
Sbjct: 164 VGLVAMLANLSD-PAAVGPAMAVALITTLYGALIGTLIAGLIESKLDQKHKTEVTACEVI 222
Query: 242 KKALIAYMN 250
Sbjct: 223 ITGTSMIAA 231
>gi|224172424|ref|XP_002339651.1| predicted protein [Populus trichocarpa]
gi|222831928|gb|EEE70405.1| predicted protein [Populus trichocarpa]
Length = 86
Score = 99.6 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G + I+ +IGG+ G L QP+E+VI+ GA LG F++ P K +K + +
Sbjct: 1 MLIIVGFLVVIISVIGGYLGAHGRLGALWQPYELVIIGGAALGAFLVGTPAKTVKQTLQA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILM 86
++ +F Q Y DVL LLY L+
Sbjct: 61 MVGVFKGPRYKQQDYIDVLSLLYELL 86
>gi|209964331|ref|YP_002297246.1| MotA [Rhodospirillum centenum SW]
gi|209957797|gb|ACI98433.1| MotA [Rhodospirillum centenum SW]
Length = 269
Score = 98.4 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 93/265 (35%), Gaps = 24/265 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
+T++G + ++ GG+ +VIV G ++A I + +L
Sbjct: 18 TTVLG-VLATAALLWFVVGTGGSAVFFYNEEGLVIVVGGVACVALLAFRGDEIWHALGAL 76
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
+ ++L + +L + E + +P+ + + ++
Sbjct: 77 ASVVREHVSIDADVAELLDVARMLHEK-RVKLAEERVRTVRNPFLRLGLQLVVDDTDLDD 135
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L +++ I + PA G++G +
Sbjct: 136 LM---------------------HVLTWRIQKQSELDAAQSRVFRVLASFAPAFGLLGTL 174
Query: 182 LGIIKAMGNL-SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
G++ + L S ++G ++ V++ TL G+IL+ + P+ +++ ++ + +
Sbjct: 175 AGMVGMLKQLGSGDIGLIGNSMAVAMLATLYGLILANLVFKPIAIKLEQRSARRVAMMNV 234
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVL 265
+ ++ G P V + R L
Sbjct: 235 LMDGVVLTRLGRSPLVIEDLLRTYL 259
>gi|227815518|ref|YP_002815527.1| flagellar motor protein MotP [Bacillus anthracis str. CDC 684]
gi|227007728|gb|ACP17471.1| flagellar motor protein MotP [Bacillus anthracis str. CDC 684]
Length = 178
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 72/175 (41%), Gaps = 19/175 (10%)
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARS 140
+ KK E + N FI +R+++ G
Sbjct: 1 MFVDFSKKSKKHGLLSLEVDGEQVDN-----------------PFIQKGIRLMLSGY-DE 42
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + NL + +GT
Sbjct: 43 EELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQDT-SQIGT 101
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+ V++ TL G +L+ + PL ++ + V +A+ G IP
Sbjct: 102 GMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPS 156
>gi|226314900|ref|YP_002774796.1| chemotaxis protein [Brevibacillus brevis NBRC 100599]
gi|226097850|dbj|BAH46292.1| putative chemotaxis protein [Brevibacillus brevis NBRC 100599]
Length = 269
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 90/265 (33%), Gaps = 27/265 (10%)
Query: 7 LFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFG 66
L +L I + G L+ + +V L + +K + L +I+
Sbjct: 10 LIGAVLLIFIHAVYLNGTLSDLLNVTAVELV---ALSVVM----SYAVKRKHLDLKKIWR 62
Query: 67 YKALGQDTYCD-VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTF 125
G+ + + +K Y K+ E + E +F
Sbjct: 63 LLIHGRQSNVEETIKRFYYYALVQKEQGYIALEKEL-----------------QQEPDSF 105
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
I ++ V E+ +++ E+ Y + + P +G+VG +LG+
Sbjct: 106 IQRG-CLLAVEGVPEEELRLILENELKGEQYRYQQSAGFFRLISLLAPGMGLVGTLLGMT 164
Query: 186 KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ +L + + G ++ ++ TL G +L+ P ++ ++ + +
Sbjct: 165 GVLKSL-EDMALTGHSLSAAVVATLYGALLANLFALPCYYRLMDLYDREMFEKRLFIEGC 223
Query: 246 IAYMNGAIPQVAIEYGRKVLPLSER 270
+ P++ E LP ++
Sbjct: 224 VGLQRMETPRLLFEKLNSFLPGDQK 248
>gi|308274782|emb|CBX31381.1| hypothetical protein N47_E48930 [uncultured Desulfobacterium sp.]
Length = 164
Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
+I + + EI+ + + + + E P+ G++G+++G++ + + + ++
Sbjct: 3 QIRDFLTTEINFFRIRREETERVLRTIAEICPSFGLIGSVVGLMSMLAGIGDT-SVILAT 61
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
I V+LT TL G++ + + P + I+ ++ L I+ + +IA + P+
Sbjct: 62 IPVALTSTLYGVLFASFIFGPFAAHIQERTDREIFLQRIILEGVIAIGSDLHPRALENKL 121
Query: 262 RKVLPLSER 270
+ L S+R
Sbjct: 122 KSFLTPSDR 130
>gi|330953775|gb|EGH54035.1| flagellar motor protein [Pseudomonas syringae Cit 7]
Length = 93
Score = 95.3 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P +GI+GA++G+I MGNL+ P LG+ I V+ T+ G+ ++ + P+ +++K+
Sbjct: 1 PTVGIIGAVMGLIHVMGNLAD-PSQLGSGIAVAFVATIYGVAMANLILLPVANKLKAIAH 59
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVL 265
+Q R ++ + L++ G P+ + +
Sbjct: 60 RQARYREMLLEGLLSIAEGENPRSIELKLQGFM 92
>gi|330953774|gb|EGH54034.1| flagellar motor protein [Pseudomonas syringae Cit 7]
Length = 153
Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 59/171 (34%), Gaps = 21/171 (12%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + IIGG + GG+ L+ +IV G LG ++ +P+ + +
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLLQSPMSAFMRAMKII 63
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
I + D + +K E + ++E
Sbjct: 64 HWIIFPPRIDLPGGVD---RVIGWSMTARKEGLLGLET-----------------VADSE 103
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
+ +++++ G A I ++++ + ++ MG
Sbjct: 104 PDGYARKGLQLLVDG-AEPAAIRSILEVDFITQETRDIQAAKVFESMGGYA 153
>gi|302341788|ref|YP_003806317.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301638401|gb|ADK83723.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 279
Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 89/252 (35%), Gaps = 23/252 (9%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCD 77
F+A G + P +++V G L +A P + + + K L
Sbjct: 20 FWASGS-LLMFFNPLGLLLVLGGTLSAAWVAFPRTTLLGLWEQMSGLRQAKVLSAR---Q 75
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+++L Y L + E L F+ + M+
Sbjct: 76 LVELFYQLGRLRRFRGVRHMEE-----------------LAEGNDNQFLRMAVAMVAD-E 117
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+ +I +++E+D L + +S MG PA G+ G ++G+I+ + LS P
Sbjct: 118 RPAADIAQRLEQEMDFFLARRESQRAVLSFMGRLAPAFGLAGTMIGLIRMLHTLSD-PTA 176
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
+ + + V+L T G++++ + PL ++K + ++ + +A
Sbjct: 177 VASGMSVALLTTFYGLMIANLVVLPLERKLKEHNRAEAVEMALITEGAVALAQETNASAV 236
Query: 258 IEYGRKVLPLSE 269
E
Sbjct: 237 AARLASFRYAEE 248
>gi|439982|gb|AAA73468.1| MotA [Treponema phagedenis]
Length = 159
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 57/179 (31%), Gaps = 22/179 (12%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
+++ IG F I+ G GG+ + I G +A PL
Sbjct: 3 LASFIGFFGAFAIILMGGIL-GGSASGFFHLPSVFITVGGSYLTLFLAYPLSYTLGIFKV 61
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+F + ++++ LY L ++ E I D
Sbjct: 62 CARVFKSADFHEK---EIVQRLYALAEKSRRTGLLALEEEIQD----------------- 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ +R ++ G I NLM+ E+ + + I+ P G++G
Sbjct: 102 FDDEFMRTGLRNVVDG-IDGEAIRNLMENELSHMEERHNRWISFINAWATLAPGYGMLG 159
>gi|148554193|ref|YP_001261775.1| MotA/TolQ/ExbB proton channel [Sphingomonas wittichii RW1]
gi|148499383|gb|ABQ67637.1| MotA/TolQ/ExbB proton channel [Sphingomonas wittichii RW1]
Length = 228
Score = 83.4 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 23/207 (11%)
Query: 29 IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYN 88
I P I IV G L L F + L L +L
Sbjct: 11 IDPVAIGIVFGGTL------------------LTTAFRA---TRADIGRALASLSLLGRA 49
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD 148
+ + S+ V F+ R + + +
Sbjct: 50 DPQADAAAARVSVSRIRELAEVRSLACVDRVETAQRFLLRAARELSDARTSADFVR-WAS 108
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTG 208
+I+ + E+ PA+G++G I+G+++ ++ + P +G A+ V++
Sbjct: 109 ADIEARRQRHQGVIGVWRAIAETAPAMGMIGTIIGLVQMFAHM-EDPAAIGPAMAVAMLT 167
Query: 209 TLLGIILSYSLCNPLTSQIKSTRLKQH 235
TL G+ILS ++ P+ ++++ +
Sbjct: 168 TLYGVILSSAVAGPIAGRLETLSDAEL 194
>gi|94264344|ref|ZP_01288136.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93455238|gb|EAT05451.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 276
Score = 83.4 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 75/201 (37%), Gaps = 3/201 (1%)
Query: 53 VIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTS 112
+ G L + Y D L + ++ + + + +
Sbjct: 35 TLVLLGPPLATLLTYPRRSIVGLLDELSVQGGAGQRRRRENLAGQIRELARIWTAANPRE 94
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
+ F+ M M+ G + EI ++++ + L + + ++ +
Sbjct: 95 F-DLEAVKIPNPFLRKGMEMVADGYS-PEEIRRILEKSYERYLSSREARLNILASLVRLS 152
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
+ G +G ++G+I +GNL Q +G+ + V+L TL G++ + + P+ + T
Sbjct: 153 QSFGFMGTVVGLIIVLGNL-QDMANIGSGVSVALFTTLYGLLFANFIYIPIQRRYAETIR 211
Query: 233 KQHRLYIIVKKALIAYMNGAI 253
++ + ++ + ++
Sbjct: 212 REMETFPLITEGVLGLAQRES 232
>gi|94268093|ref|ZP_01291084.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93451733|gb|EAT02501.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 276
Score = 83.0 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 75/201 (37%), Gaps = 3/201 (1%)
Query: 53 VIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTS 112
+ G L + Y D L + ++ + + + +
Sbjct: 35 TLVLLGPPLATLLTYPRRSIVGLLDELSVQGGAGQRRRRENLAGQIRELARIWTAANPRE 94
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
+ F+ M M+ G + EI ++++ + L + + ++ +
Sbjct: 95 F-DLEAVKIPNPFLRKGMEMVADGYS-PEEIRRILEKSYERYLSSREARLNILASLVRLS 152
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
+ G +G ++G+I +GNL Q +G+ + V+L TL G++ + + P+ + T
Sbjct: 153 QSFGFMGTVVGLIIVLGNL-QDMANIGSGVSVALFTTLYGLLFANFIYIPIQRRYAETIR 211
Query: 233 KQHRLYIIVKKALIAYMNGAI 253
++ + ++ + ++
Sbjct: 212 REMETFPLITEGVLGLAQRES 232
>gi|83310797|ref|YP_421061.1| flagellar motor component [Magnetospirillum magneticum AMB-1]
gi|82945638|dbj|BAE50502.1| Flagellar motor component [Magnetospirillum magneticum AMB-1]
Length = 296
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 95/240 (39%), Gaps = 21/240 (8%)
Query: 53 VIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTS 112
I S + + ++A ++ +L L L + E H++ P ++F
Sbjct: 28 TIFSSAIQSVRALRHEAPTREAALALLLCLCDLWAFARDKGDLALEAHVEAPLTDSLFLR 87
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
V + L T + D+ R + +G + + + L+ + E+ +
Sbjct: 88 HQAVCDLPWLLTPLVDFARRLTLGCSNAKQARRLLLAYRET---ERRALEQVLRQASMVW 144
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLL---GIILSYSLCNPLTSQIKS 229
P +G+ + G+ +G + ++ G L G++ L ++++
Sbjct: 145 P-LGLCLWLAGL-AVLGETGIT--------ALAWWGASLAAAGVVAGVWLV-----RLRA 189
Query: 230 TRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKA 289
++ + + + ++Y+NG +P+V E R VLP + RPS + + + + + +A
Sbjct: 190 IVAQRLGILDAMIEGCLSYLNGYVPRVCAENARSVLPPALRPSCFDLDEALGANSTSIRA 249
>gi|83312264|ref|YP_422528.1| flagellar motor component [Magnetospirillum magneticum AMB-1]
gi|82947105|dbj|BAE51969.1| Flagellar motor component [Magnetospirillum magneticum AMB-1]
Length = 405
Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 89/227 (39%), Gaps = 12/227 (5%)
Query: 53 VIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTS 112
I S + + +A ++ +L LY L K E H + P +S++F
Sbjct: 2 TIFSSAIQSVRALRREAPTREAALALLLCLYDLWVLAKVKGDLYLEAHAEMPLSSSLFFH 61
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
+ + L T + D++R++ +G+ + + L+ + EK H +
Sbjct: 62 HKPMRDLPWLLTPLVDFIRLMTLGSNNAKQARRLLQAYRET---EKRALDHVLRQASLVW 118
Query: 173 PAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
P +G I G+ + +L ++ G + + + + ++++
Sbjct: 119 P-MGFCLWIAGL-AVLASLG-----GLGLTALAWWG--VSLAAAGVMVGIWLVRLRTIAD 169
Query: 233 KQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQE 279
+ + + + ++Y+NG Q+ E R VLP + +PS +A
Sbjct: 170 HRLGVLDAMTEGCLSYLNGYAQQICAENARFVLPPALKPSFFELADA 216
>gi|298528937|ref|ZP_07016340.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510373|gb|EFI34276.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 274
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/250 (16%), Positives = 90/250 (36%), Gaps = 25/250 (10%)
Query: 3 TIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
TI I + F+ G I ++V LG ++++ +K +
Sbjct: 5 TITAGLICFTLFVSAFFLAG-EASIYFNATAFLVVTSGTLGAGLLSSGPGRVKKALGFAS 63
Query: 63 EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNEL 122
+ + + D L L L S E+
Sbjct: 64 RAYTEEQGREKRLLDALMSLGHLHRRHGIISPESI----------------------REI 101
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
+ +I G + + EI +M + + + +M P+ G+ G+++
Sbjct: 102 NPVAAHGLELIKDGYSET-EIREIMGSDAQAHCRFRQELEKVFRNMAAYAPSFGVAGSVI 160
Query: 183 GIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G++ + + ++ ++ + V+L TL GI+L+ L P+ +++ + K+ R +V
Sbjct: 161 GLVGLLMGIEET-SLILKNVPVTLVSTLYGIVLANFLLLPVAEKMRQEKEKEIREREMVL 219
Query: 243 KALIAYMNGA 252
A+I GA
Sbjct: 220 CAMINMSRGA 229
>gi|4378862|gb|AAD19730.1| motility protein A [Zymomonas mobilis subsp. mobilis ZM4]
Length = 225
Score = 79.6 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/226 (11%), Positives = 74/226 (32%), Gaps = 21/226 (9%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLY 83
+ ++V + + I + + + K D + L
Sbjct: 18 SVSHFFDAAAFLLVLVGSFLIALFRSTAADILRAFKAFQPLLTAKPEHDGEVAD--RALQ 75
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
++ K T + ID + L + +
Sbjct: 76 AVLQQTKAKG-IATADRIDITFAPLFLQKAVGRLTDCR-----------------DPDDF 117
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
+ +++ + +G+ P++ ++G ++G++ +LS LG ++
Sbjct: 118 RQWITGQLEKRKNRHQGAINFWYIVGDVAPSVAMIGTVVGLVNMFSHLSDV-NSLGPSMA 176
Query: 204 VSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
+++ TL G+ LS + P+ +++ + + + V LI+ +
Sbjct: 177 MAILTTLYGLCLSTLIAAPIAGRLEYLSDMEGQWWKRVADTLISSV 222
>gi|260752882|ref|YP_003225775.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552245|gb|ACV75191.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 231
Score = 79.6 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/226 (11%), Positives = 74/226 (32%), Gaps = 21/226 (9%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLY 83
+ ++V + + I + + + K D + L
Sbjct: 6 SVSHFFDAAAFLLVLVGSFLIALFRSTAADILRAFKAFQPLLTAKPEHDGEVAD--RALQ 63
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
++ K T + ID + L + +
Sbjct: 64 AILQQTKAKG-IATADRIDITFAPLFLQKAVGRLTDCR-----------------DPDDF 105
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
+ +++ + +G+ P++ ++G ++G++ +LS LG ++
Sbjct: 106 RQWITGQLEKRKNRHQGAINFWYIVGDVAPSVAMIGTVVGLVNMFSHLSDV-NSLGPSMA 164
Query: 204 VSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
+++ TL G+ LS + P+ +++ + + + V LI+ +
Sbjct: 165 MAILTTLYGLCLSTLIAAPIAGRLEYLSDMEGQWWKRVADTLISSV 210
>gi|56551512|ref|YP_162351.1| MotA/TolQ/ExbB proton channel protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241761155|ref|ZP_04759244.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|56543086|gb|AAV89240.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241374774|gb|EER64235.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 231
Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/226 (11%), Positives = 74/226 (32%), Gaps = 21/226 (9%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLY 83
+ ++V + + I + + + K D + L
Sbjct: 6 SVSHFFDAAAFLLVLVGSFLIALFRSTAADILRAFKAFQPLLTAKPEHDGEVAD--RALQ 63
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
++ K T + ID + L + +
Sbjct: 64 AVLQQTKAKG-IATADRIDITFAPLFLQKAVGRLTDCR-----------------DPDDF 105
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
+ +++ + +G+ P++ ++G ++G++ +LS LG ++
Sbjct: 106 RQWITGQLEKRKNRHQGAINFWYIVGDVAPSVAMIGTVVGLVNMFSHLSDV-NSLGPSMA 164
Query: 204 VSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
+++ TL G+ LS + P+ +++ + + + V LI+ +
Sbjct: 165 MAILTTLYGLCLSTLIAAPIAGRLEYLSDMEGQWWKRVADTLISSV 210
>gi|294013082|ref|YP_003546542.1| chemotaxis MotA protein [Sphingobium japonicum UT26S]
gi|292676412|dbj|BAI97930.1| chemotaxis MotA protein [Sphingobium japonicum UT26S]
Length = 228
Score = 79.2 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 78/232 (33%), Gaps = 25/232 (10%)
Query: 23 GNPYILIQPFEIV-IVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL 81
G L P ++ +VAG GL ++ +L F ++ L
Sbjct: 9 GIMAHLFDPLTLLAMVAGVGLVAL--------FQNGARALGRAFAA----------LVPL 50
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
L + +R ID V ++ + R + ++
Sbjct: 51 LRADPTKDRDAARAAMLK-IDQVAQLRGLACTDRV---KTANPYLTEAARKLA-NCEKTE 105
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
+ E + + A + ++ PA+G+ G I+G++ + P LG +
Sbjct: 106 QFELWAVQSLADRAQRHGAACKAWLSIADAAPALGMAGTIIGLVGMFAAMDD-PAALGPS 164
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+ ++L T G++++ + P+ +++ ++ V + A
Sbjct: 165 MALALLTTFYGVVIANVIAAPVATRLADLSERELAWQKEVTDRMAAIARREN 216
>gi|332187890|ref|ZP_08389623.1| hypothetical protein SUS17_3028 [Sphingomonas sp. S17]
gi|332012051|gb|EGI54123.1| hypothetical protein SUS17_3028 [Sphingomonas sp. S17]
Length = 233
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 76/214 (35%), Gaps = 25/214 (11%)
Query: 25 PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYI 84
+ + P + IV G L ++ P + + +L + + D + + L
Sbjct: 7 LHQFLDPAALAIVLGGTLIATLLRTPWGDARRAVRAL-TVLIRRPFSADPLVEQIAHLS- 64
Query: 85 LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIE 144
K+ + +V+ + +L I IV + +
Sbjct: 65 --RVAKRHGVLTLDR---------------SVITDPDLAEAIA-----AIVDGEGAESVT 102
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
N + + + + E+ PA+G+VG ++G+ ++ P+ +G A+ +
Sbjct: 103 NRLAMARQGRVERHVAIADIWAGAAEAAPAMGMVGTLIGLAAMFATMND-PQRIGGAMAI 161
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+L TL G + + + P+ +++ +
Sbjct: 162 ALLATLYGALFANLVAQPIAIRLRRAARIEAFER 195
>gi|229017015|ref|ZP_04173935.1| Chemotaxis protein, MotA [Bacillus cereus AH1273]
gi|229023197|ref|ZP_04179708.1| Chemotaxis protein, MotA [Bacillus cereus AH1272]
gi|228738122|gb|EEL88607.1| Chemotaxis protein, MotA [Bacillus cereus AH1272]
gi|228744286|gb|EEL94368.1| Chemotaxis protein, MotA [Bacillus cereus AH1273]
Length = 116
Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
++ E++ ++ ++++ +YE K + +G+ PA G++G ++G+I + NL
Sbjct: 1 MLSGYDEAELKEVLMKDVETEVYELRKGATLLDKIGDFAPAYGMIGTLIGLIIMLQNLQD 60
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+ + T + V++ TL G I++ + PL+ ++ + V +
Sbjct: 61 T-SQIATGMAVAMLTTLYGSIIANMIVIPLSEKVYRGIEDLYTEKKFVIE 109
>gi|307293791|ref|ZP_07573635.1| MotA/TolQ/ExbB proton channel [Sphingobium chlorophenolicum L-1]
gi|306879942|gb|EFN11159.1| MotA/TolQ/ExbB proton channel [Sphingobium chlorophenolicum L-1]
Length = 222
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 50/134 (37%), Gaps = 2/134 (1%)
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
F+ R + ++ + E + + + ++ PA+G+ G
Sbjct: 79 KTANPFLTQAARKLA-NCEKTDQFELWAARSLADRAQRHASARNVWLSIADAAPALGMAG 137
Query: 180 AILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
I+G++ + P LG ++ ++L T G++++ L P+ +++ ++
Sbjct: 138 TIVGLVGMFAGMDD-PATLGPSMALALLTTFYGVVIANILAAPVAARLADLSERELAWQR 196
Query: 240 IVKKALIAYMNGAI 253
V + A
Sbjct: 197 EVADQMAAIARREN 210
>gi|289612399|emb|CBI60114.1| unnamed protein product [Sordaria macrospora]
Length = 79
Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ--PFEIVIVAGAGLGGFVMANPLKVIKDSG 58
M IG + I + GGF GG+ ++ P E++I+ GA +G ++ N + +K G
Sbjct: 1 MFPAIGFVVLIAMVFGGFAFTGGDLGPVLHALPHEMLIIGGAAVGALIIGNSGRELKGMG 60
Query: 59 VSLLEIFGYKALGQDTYCD 77
+++ + Y D
Sbjct: 61 GGFMKVLKGPKYKKQDYLD 79
>gi|23010576|ref|ZP_00051216.1| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 66
Score = 76.1 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 45/63 (71%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++GL I I C++GGF AMGG+ ++ QP+E VI+ G G FV+ANPLKV+ DSG +
Sbjct: 1 MGILVGLVIAIGCMLGGFVAMGGHLIVIWQPWEFVIIGGMAAGTFVIANPLKVVMDSGKA 60
Query: 61 LLE 63
+E
Sbjct: 61 TME 63
>gi|330883887|gb|EGH18036.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 76
Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 34/72 (47%)
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
P LG+ I V+ T+ G+ ++ + P+ +++K +Q R ++ + L++ G
Sbjct: 4 DPSQLGSGIAVAFVATIYGVAMANLILLPVANKLKGIAHRQSRYREMLLEGLLSIAEGEN 63
Query: 254 PQVAIEYGRKVL 265
P+ + +
Sbjct: 64 PRSIELKLQGFM 75
>gi|213421510|ref|ZP_03354576.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 59
Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 237 LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKK 288
+ VK L++ +NG P +A+E+GRK L SERPS + + V + +
Sbjct: 1 MMQCVKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQ 52
>gi|331663388|ref|ZP_08364298.1| chemotaxis protein MotB [Escherichia coli TA143]
gi|331059187|gb|EGI31164.1| chemotaxis protein MotB [Escherichia coli TA143]
Length = 366
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 238 YIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNK 287
VK L++ +NG P +A+E+GRK L SERPS + + V +
Sbjct: 1 MHCVKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKKSA 50
>gi|296282283|ref|ZP_06860281.1| hypothetical protein CbatJ_01615 [Citromicrobium bathyomarinum
JL354]
Length = 251
Score = 70.3 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 30/217 (13%)
Query: 29 IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYN 88
P + IV G L V+ L + + + +
Sbjct: 35 FDPASLGIVLGGTLLATVLRCGLAETRLALAKIGALAARP-----------------FDP 77
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD 148
+ +R + I D + + + P + E + D + +A E E+
Sbjct: 78 AR--ARAQMARQIRDISSEGLMRAEPVRFGDGEFDH-LADVLISRRSIDALHGEHEDQKR 134
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT--AIGVSL 206
++ H + E P +G+ G ++ A+G ++ G AI +++
Sbjct: 135 TRVEAAQT----AVHVLGQAAELAPVLGLAGTLV----ALGTMTPDGTAGGMTGAIAMAV 186
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
TL GI + L +PL + I+ ++ R V
Sbjct: 187 VTTLYGIAAANFLFSPLAAAIERRSAREERDRQAVLD 223
>gi|213586190|ref|ZP_03368016.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 54
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVI 54
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G F++ N K I
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGMGAFIVGNNGKAI 54
>gi|229011042|ref|ZP_04168236.1| Chemotaxis protein, MotA [Bacillus mycoides DSM 2048]
gi|228750214|gb|EEM00046.1| Chemotaxis protein, MotA [Bacillus mycoides DSM 2048]
Length = 156
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 24/156 (15%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYIL---IQPFEIVIVAGAGLGGFVMANPLKVIKDS 57
+S+ G+ + + +I GG + I+IV G V+A IK
Sbjct: 20 ISSPFGIVVGFVILIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKKY 79
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVL 117
S+ + + + D L KK E + N
Sbjct: 80 TKSIFTVLHRREENLEQLTD---LFVDFSKKSKKHGLLSLEVDGEQVDN----------- 125
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
FI +R+++ G + E++ ++ +++
Sbjct: 126 ------PFIQKGIRLMLSGYDEA-ELKEVLMRDVET 154
>gi|330883800|gb|EGH17949.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 116
Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 93 SRNETENHIDDPYNSTIFTSIPTVL-----ENNELTTFICDYMRMIIVGNARSYEIENLM 147
R + +D ++ +L ++E ++ +++++ G A I +++
Sbjct: 8 PRIDLPGGVDRVIGWSMTARKEGLLGLETVADSEPDSYARKGLQLLVDG-AEPAAIRSIL 66
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+ + ++ MG P +GI+GA++G+I MGNL+
Sbjct: 67 EVDFITQETRDIQAAKVFESMGGYAPTVGIIGAVMGLIHVMGNLADP 113
>gi|330883820|gb|EGH17969.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 113
Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 93 SRNETENHIDDPYNSTIFTSIPTVL-----ENNELTTFICDYMRMIIVGNARSYEIENLM 147
R + +D ++ +L ++E ++ +++++ G A I +++
Sbjct: 4 PRIDLPGGVDRVIGWSMTARKEGLLGLETVADSEPDSYARKGLQLLVDG-AEPAAIRSIL 62
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL 198
+ + ++ MG P +GI+GA++G+I MGNL+ ++
Sbjct: 63 EVDFITQETRDIQAAKVFESMGGYAPTVGIIGAVMGLIHVMGNLADPSQLG 113
>gi|255021443|ref|ZP_05293490.1| flagellar motor protein [Acidithiobacillus caldus ATCC 51756]
gi|254969148|gb|EET26663.1| flagellar motor protein [Acidithiobacillus caldus ATCC 51756]
Length = 93
Score = 65.7 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M I+G I + I GGF GG+ LIQP+E++++AG G F A + K +
Sbjct: 1 MFLILGYLIGLGAIFGGFVLEGGSISALIQPYELLMIAGGAFGAFFAATFPRSFKAVLRT 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGS 93
L + Y ++L LL L + +
Sbjct: 61 LPMALKGSKYTKVAYLELLSLLNELFCAFARVA 93
>gi|83310798|ref|YP_421062.1| flagellar motor component [Magnetospirillum magneticum AMB-1]
gi|82945639|dbj|BAE50503.1| Flagellar motor component [Magnetospirillum magneticum AMB-1]
Length = 398
Score = 63.0 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 90/230 (39%), Gaps = 11/230 (4%)
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
SG++ + +A + +L LY L K E+H+ P S I ++
Sbjct: 2 SGIASIRSLIREAPTRKAALALLLCLYDLWSLAKARGPLALEDHVVHPERSVILHQHRSL 61
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L + D +R +G S + ++D I + ++ H + + +
Sbjct: 62 ARLPWLMEPLMDLVRHFTLGTEGSSAYDQMIDGII-AAEEQWMRTVHGLVML------LA 114
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLTGT-LLGIILSYSLCNPLTSQIKSTRLKQH 235
V A+ +I + + + P ++ ++ ++ I L+ + + I ++
Sbjct: 115 SVIAVFWVIAMV--IVRPPLVMEGSLSWPTVTVWIVPIGLAMLALHCIKVWIGWVASERT 172
Query: 236 RLYIIVKKALIAYMNGA-IPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+ +++ + + +GA PQV+ + R LP RPS + + + +
Sbjct: 173 GMLEALRRGICFHADGAFAPQVSADAARMALPQRLRPSHDQLEDVIRAES 222
>gi|289808641|ref|ZP_06539270.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 56
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD 56
M ++G + I + GG+ GG+ L QP E+VI+ GAG+G + A + K
Sbjct: 1 MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGMGRSLSATTGRPSKA 56
>gi|167950040|ref|ZP_02537114.1| flagellar motor protein PomA [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 72
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 25/63 (39%)
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
V+L TL G +++ + P+ ++ + ++ + + G P+V +
Sbjct: 1 AVALLTTLYGAVIANAFAQPIADKLARASAMEKTNKSLIIETISGIQEGMNPRVLEQLLS 60
Query: 263 KVL 265
L
Sbjct: 61 TYL 63
>gi|94495415|ref|ZP_01301995.1| flagellar motor component [Sphingomonas sp. SKA58]
gi|94424803|gb|EAT09824.1| flagellar motor component [Sphingomonas sp. SKA58]
Length = 228
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 23/190 (12%)
Query: 25 PYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYI 84
L P ++ + G + N L + +L + L
Sbjct: 11 FSHLFDPATLLAMLGGIALVALFQNGLAACGRAIGALAPLLRANPLRD------------ 58
Query: 85 LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIE 144
+ + ID + V F+ + R+ +
Sbjct: 59 ------QDAARAALLQIDHVAQLRGLSCTDRV---KTAHPFLTQAAHKLA-NCDRTEQFA 108
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV 204
+ + + + ++ PA+G+ G ILG+I ++ P LG ++ +
Sbjct: 109 LWATQALADRAQRHGAAHRVWLSVADAAPALGMAGTILGLIGMFAAMND-PAALGPSMAL 167
Query: 205 SLTGTLLGII 214
+L T G++
Sbjct: 168 ALLTTFYGVV 177
>gi|227326901|ref|ZP_03830925.1| flagellar motor protein MotA [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 53
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMAN 49
M I+G + + I+GG+ +GG L QP E++I+ GA +G F++ N
Sbjct: 1 MLVILGYIVIVASILGGYLMVGGALGALYQPSELLIIGGAAVGAFIVGN 49
>gi|229837431|ref|ZP_04457594.1| Flagellar motor rotation protein motA [Yersinia pestis Pestoides
A]
gi|229705554|gb|EEO91564.1| Flagellar motor rotation protein motA [Yersinia pestis Pestoides
A]
Length = 68
Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M + GL + + C+IGG+ GG+ QP EI+I+ G+G+G ++ NP V+++
Sbjct: 1 MQKLFGLLVIMGCVIGGYLMSGGSLSSFWQPGEIIIIFGSGIGALILGNPGSVLQEMWHQ 60
Query: 61 LLEI 64
+L +
Sbjct: 61 ILAV 64
>gi|283850491|ref|ZP_06367779.1| hypothetical protein DFW101DRAFT_0349 [Desulfovibrio sp. FW1012B]
gi|283574062|gb|EFC22034.1| hypothetical protein DFW101DRAFT_0349 [Desulfovibrio sp. FW1012B]
Length = 87
Score = 59.5 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLG 43
M + G+F+ + I G+Y GG +L+QP E +I+ GA LG
Sbjct: 1 MIVLAGVFVVLASICLGYYLEGGIFSVLVQPAEWLIIFGAALG 43
>gi|83312263|ref|YP_422527.1| hypothetical protein amb3164 [Magnetospirillum magneticum AMB-1]
gi|82947104|dbj|BAE51968.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 398
Score = 59.5 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 92/232 (39%), Gaps = 15/232 (6%)
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
SG++ + +A ++ +L LY L K E+H+ P S I +
Sbjct: 2 SGIASIRSLIREAPTREAALALLLCLYDLWSLAKARGPLALEDHVVHPERSVILHQHRLL 61
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIG 176
L + D +R +G S + ++D I + ++ H + + +
Sbjct: 62 SRLPWLMEPLMDLVRHFTLGTDGSSAYDQMIDGII-AAEEQWMRTVHGLVML------LA 114
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIG---VSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
V A+ +I + + + P ++ ++ V+L +G+ + + + I +
Sbjct: 115 SVIAVFWVIAMV--IVRPPLVMEGSLSWPTVTLWIVPMGLTM--LALHCIKVWIGWVASE 170
Query: 234 QHRLYIIVKKALIAYMNGA-IPQVAIEYGRKVLPLSERPSIEIVAQEVLQYN 284
+ + +++ + + +GA PQV+ + R LP RPS + + + +
Sbjct: 171 RTGMLEALRRGICFHADGAFAPQVSADAARMALPQRLRPSHDQLENMIRAES 222
>gi|213864668|ref|ZP_03386787.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 45
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 251 GAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
G P +A+E+GRK L SERPS + + V + ++ +
Sbjct: 1 GYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQT 40
>gi|213029647|ref|ZP_03344094.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 52
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 92 GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
E I++P S IF S P +L + + FI DY+R+II GN ++EI
Sbjct: 1 QGMFSLERDIENPKESEIFASYPRILADAVMLDFIVDYLRLIISGNMNTFEI 52
>gi|85710160|ref|ZP_01041225.1| YtxD [Erythrobacter sp. NAP1]
gi|85688870|gb|EAQ28874.1| YtxD [Erythrobacter sp. NAP1]
Length = 221
Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM-GNLSQSPKILGTAIGVSLT 207
E L ++ + GE P G+VG + I + M G ++ + + ++ ++
Sbjct: 105 EARKARLADRARGARLFETAGELAPVFGLVGTLFAITQLMPGPGFETSQTIMASLASAVL 164
Query: 208 GTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
TL G++ ++ + P+ I+ + + +
Sbjct: 165 STLYGVLTAHLVYFPIARAIERQSDAEEHVRSAMLD 200
>gi|167750719|ref|ZP_02422846.1| hypothetical protein EUBSIR_01697 [Eubacterium siraeum DSM 15702]
gi|167656398|gb|EDS00528.1| hypothetical protein EUBSIR_01697 [Eubacterium siraeum DSM 15702]
Length = 87
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
++ IIG ++ + G GG I + I G +G + PL +K+
Sbjct: 14 ITIIIGWVVSFSLVTFG-IFNGGQLDWFIDVPSLAITVGGTIGCLFASFPLSYLKNLPKY 72
Query: 61 LLEIFGYK 68
L K
Sbjct: 73 LKLALFPK 80
>gi|330901957|gb|EGH33294.1| flagellar motor protein MotA [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 40
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 245 LIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVL 281
L+A +G P +A+E+GRKVL RPS + Q V
Sbjct: 2 LVASASGMPPSLAVEFGRKVLYPLHRPSFSELEQAVR 38
>gi|83312873|ref|YP_423137.1| flagellar motor component [Magnetospirillum magneticum AMB-1]
gi|82947714|dbj|BAE52578.1| Flagellar motor component [Magnetospirillum magneticum AMB-1]
Length = 426
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 82/232 (35%), Gaps = 16/232 (6%)
Query: 51 LKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIF 110
+ I+ S SL ++ +A + +L L + E H D P S I
Sbjct: 1 MNYIRASFKSLRQL-RREAPTPEAARALLIALNDFWAIARMKGDLALEPHCDHPERS-IL 58
Query: 111 TSIPTVLEN-NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI-SHM 168
L + L+ D++R +G + L+D + ++ + + +
Sbjct: 59 LHYHRALRDLPWLSAPFIDFIRQSTLGLGEVKAAQRLLDGHL-LVEQRHMDDTLSFAAMA 117
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
+ A G++G + A + S G L + L+ +I+
Sbjct: 118 ANTAAAFGVIGTAGAL--AFAQVDWSHMAFGLIGSSGLLLLASRLWLA---------RIR 166
Query: 229 STRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
+ ++ + + +A+++G P E+ R LP R + + + + +
Sbjct: 167 TIATERLGMLKALSVGCVAHLDGYAPMTTAEHARFSLPPRLRMTAKDLEEAL 218
>gi|5726432|gb|AAD48436.1|AF160510_2 flagellar motor protein [Yersinia pestis]
Length = 42
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGL 42
M I+G + + + GG+ +GG+ L QP E +I+AGAG+
Sbjct: 1 MLVILGYLVVLGAVFGGYTLVGGHLGALYQPAEFLIIAGAGI 42
>gi|209809662|ref|YP_002265201.1| Biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
gi|208011225|emb|CAQ81658.1| Biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
Length = 453
Score = 55.7 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 109 IFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAI 165
I I T L+N + T + + + +E+L ++ I+ E+ K +
Sbjct: 290 IQQQIKTQLKNPDAPTDNPLGRVLSVYDEEKHRSVESLELRLLEAIVDEQQGLEKGLSML 349
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L
Sbjct: 350 KLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLL- 408
Query: 222 PLTSQIKSTRLKQHR-LYIIVKKALIAYMNGAIPQ 255
I ST+ + R + L+A PQ
Sbjct: 409 -FAHNILSTQAENIRSILEKQGIGLVAMQAEKQPQ 442
>gi|83312262|ref|YP_422526.1| hypothetical protein amb3163 [Magnetospirillum magneticum AMB-1]
gi|82947103|dbj|BAE51967.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 469
Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 73/211 (34%), Gaps = 47/211 (22%)
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
A ++T D+ L+ L + K E+ +D P S +F + V + + L + D
Sbjct: 16 APTRETARDLCLLINDLCHLDKMRQIVVLEDTLDHPERSLLFYAYRQVRDRSWLAEPMRD 75
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYE-KLKPYHAISHMGESLPAIGIVGAILGIIKA 187
R I +G ++E L+D I + E + ++ M +
Sbjct: 76 IFRHITLGLTEQVQVERLLDSRIAAMAEEDRRHIRDTLAGMAD----------------- 118
Query: 188 MGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ + L ++ + + ++ AL+A
Sbjct: 119 -KSARED----------------------------LRERLNDAAADKVLVLRALRNALVA 149
Query: 248 YMNGAIPQVAIEYGRKVLPLSERPSIEIVAQ 278
++ G P VA +Y R LP S R + + +
Sbjct: 150 HVGGYAPMVAADYARFSLPDSLRMDYDELIE 180
>gi|27366804|ref|NP_762331.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
CMCP6]
gi|27358371|gb|AAO07321.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
CMCP6]
Length = 455
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + R +E L ++ I+ E+ K + + P +G++G ++G+I+
Sbjct: 313 LAVYDKDRPRSVEALELRLLETIVDEQTGLEKGLSMLKLLAALAPMLGLLGTVIGMIETF 372
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ + I ++L T+LG++ + L + + + +
Sbjct: 373 QVITQFGNGDPKVMASGISMALVTTVLGLVAAMPLLL-AHNVLSGWAEEIRSILEKQGIG 431
Query: 245 LIAYMN 250
L+A
Sbjct: 432 LVAQQA 437
>gi|3411278|gb|AAC31212.1| flagellum motor structural protein [Yersinia enterocolitica]
Length = 39
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAG 39
M I+G + + + GG+ +GG+ L QP E +I+ G
Sbjct: 1 MLVILGYIVVLGAVFGGYIIVGGHLGALYQPAEFLIIGG 39
>gi|92113740|ref|YP_573668.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91796830|gb|ABE58969.1| outer membrane transport energization protein ExbB
[Chromohalobacter salexigens DSM 3043]
Length = 469
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 16/126 (12%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+E +DE + + + M P +G++G + G+I ++ + P
Sbjct: 340 PEALEARLDEALLAEKPRLERGQPLVKLMAAVAPLLGLLGTVTGMIGTFQSITVFGTGDP 399
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
+++ I +L T+LG+I + L + + S + L+ + G
Sbjct: 400 QLMAGGISQALVTTVLGLIAAVPLLF-AHTALSSRSRE-----------LLGTLEGRASA 447
Query: 256 VAIEYG 261
V E+
Sbjct: 448 VLAEHL 453
>gi|330883957|gb|EGH18106.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 49
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVM 47
++IGL + + IIGG + GG+ L+ +IV G LG ++
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGTLGASLL 49
>gi|149907622|ref|ZP_01896369.1| MotA/TolQ/ExbB proton channel family protein [Moritella sp. PE36]
gi|149809292|gb|EDM69221.1| MotA/TolQ/ExbB proton channel family protein [Moritella sp. PE36]
Length = 480
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
N+ + E+ +DE I L E K +I+ + P +G++G + G+I+ + +
Sbjct: 338 NSNADELARFLDEAILAELPECRKGLGSIAVLATIAPMLGLLGTVAGMIETFQAITAYGN 397
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
P++L + I +L T G+I + L L S + S + L+A
Sbjct: 398 SDPQVLSSGISKALLTTKFGLIAAVPLML-LHSLLTSKSDSIVHVIEHQSAGLLA 451
>gi|59713962|ref|YP_206737.1| TolQ protein [Vibrio fischeri ES114]
gi|59482210|gb|AAW87849.1| TolQ protein [Vibrio fischeri ES114]
Length = 450
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 131 RMIIVGNARSYE-IENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ V + + +E+L ++ I+ E+ K + + P +G++G + G+I+
Sbjct: 311 RILSVYDEEKHRNVESLELRLLEAIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIE 370
Query: 187 AMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR-LYIIV 241
++Q PK++ I ++L T+LG++ + L I ST+ + R +
Sbjct: 371 TFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLL--FAHNILSTQAENVRSILEKQ 428
Query: 242 KKALIAYMN 250
L+A
Sbjct: 429 GIGLVAIQA 437
>gi|197336703|ref|YP_002158452.1| TolQ protein [Vibrio fischeri MJ11]
gi|197313955|gb|ACH63404.1| TolQ protein [Vibrio fischeri MJ11]
Length = 450
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 131 RMIIVGNARSYE-IENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ V + + +E+L ++ I+ E+ K + + P +G++G + G+I+
Sbjct: 311 RILSVYDEEKHRNVESLELRLLEAIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIE 370
Query: 187 AMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR-LYIIV 241
++Q PK++ I ++L T+LG++ + L I ST+ + R +
Sbjct: 371 TFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLL--FAHNILSTQAENVRSILEKQ 428
Query: 242 KKALIAYMN 250
L+A
Sbjct: 429 GIGLVAIQA 437
>gi|37676579|ref|NP_936975.1| biopolymer transport protein ExbB-related protein [Vibrio
vulnificus YJ016]
gi|37201122|dbj|BAC96945.1| biopolymer transport protein ExbB-related protein [Vibrio
vulnificus YJ016]
Length = 455
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + + +E L ++ I+ E+ K + + P +G++G ++G+I+
Sbjct: 313 LAVYDKDKPRSVEALELRLLETIVDEQTGLEKGLSMLKLLAALAPMLGLLGTVIGMIETF 372
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ + I ++L T+LG++ + L + + + +
Sbjct: 373 QVITQFGNGDPKVMASGISMALVTTVLGLVAAMPLLL-AHNVLSGWAEEIRSILEKQGIG 431
Query: 245 LIAYMN 250
L+A
Sbjct: 432 LVAQQA 437
>gi|307545630|ref|YP_003898109.1| MotA/TolQ/ExbB proton channel [Halomonas elongata DSM 2581]
gi|307217654|emb|CBV42924.1| MotA/TolQ/ExbB proton channel [Halomonas elongata DSM 2581]
Length = 462
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
+E +DE + + + + P +G++G + G+I ++
Sbjct: 324 SGHAPEALEARLDEAMLAEQPRLERGQSLVKMLAAVAPLLGLLGTVTGMIVTFQSITVFG 383
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLC 220
+ P+++ I +L T+LG+I + L
Sbjct: 384 TGDPQLMAGGISQALVTTVLGLITAVPLL 412
>gi|320158687|ref|YP_004191065.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
gi|319933999|gb|ADV88862.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
Length = 455
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + + +E L ++ I+ E+ K + + P +G++G ++G+I+
Sbjct: 313 LAVYDKDKPRSVEALELRLLETIVDEQTGLEKGLSMLKLLAALAPMLGLLGTVIGMIETF 372
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ + I ++L T+LG++ + L + + + +
Sbjct: 373 QVITQFGNGDPKVMASGISMALVTTVLGLVAAMPLLL-AHNVLSGWAEEIRSILEKQGIG 431
Query: 245 LIAYMN 250
L+A
Sbjct: 432 LVAQQA 437
>gi|149184203|ref|ZP_01862521.1| hypothetical protein ED21_25833 [Erythrobacter sp. SD-21]
gi|148831523|gb|EDL49956.1| hypothetical protein ED21_25833 [Erythrobacter sp. SD-21]
Length = 218
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 66/215 (30%), Gaps = 25/215 (11%)
Query: 29 IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYN 88
P + IV L + ++ + + Y + K I
Sbjct: 6 FDPLALAIVLMGTLIATFLRCGAADVRIAISA-------------AYGLLHKPFDIAQAK 52
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD 148
I + + + P +NE D + +I+ +
Sbjct: 53 A------ALAIQIREIADDGFLRAEPHHFGDNEF-----DILSDLIISQRSIQSLHTEHL 101
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTG 208
+ D L E P +G+ G + + +A G+ I+ A+ +++
Sbjct: 102 KFKDARLKAAETAVSVFDRAAELAPILGLAGTLTALAQAQGSTVAETDIVA-AVSMAVIT 160
Query: 209 TLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
TL G++ + ++ PL S I ++ V +
Sbjct: 161 TLYGLVAANAIFAPLGSAIARQSHREEIDRQNVLE 195
>gi|94499685|ref|ZP_01306222.1| TolR [Oceanobacter sp. RED65]
gi|94428439|gb|EAT13412.1| TolR [Oceanobacter sp. RED65]
Length = 452
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
+ +E +DE + L E + I + P +G++G + G+I ++
Sbjct: 332 DESDLESLEMTLDEAVLKELPELERGLSLIKLLAAVAPLLGLLGTVTGMIATFQSITLFG 391
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I +L T+LG++ + L + + + + + ++ LIA
Sbjct: 392 TGDPKLMAGGISQALITTVLGLVAAIPLLF-MHNFLNTRSKEVIQVLDQQAAGLIA 446
>gi|323497732|ref|ZP_08102747.1| putative biopolymer transport protein exbb-related protein [Vibrio
sinaloensis DSM 21326]
gi|323317208|gb|EGA70204.1| putative biopolymer transport protein exbb-related protein [Vibrio
sinaloensis DSM 21326]
Length = 448
Score = 53.4 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 15/139 (10%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
N +E + E I K + + P +G++G + G+I+ +
Sbjct: 320 NRTPEALELRLLEVILDEQSHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITLFGG 379
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
K++ I +L T++G++ + L L + ST+ ++ R I+ K+ +A
Sbjct: 380 GDAKVMAGGISTALVTTVMGLVAAMPLL--LAHNLLSTQAEKLRN-ILEKQG-VAI---- 431
Query: 253 IPQVAIEYGRKVLPLSERP 271
VA + R L +E+P
Sbjct: 432 ---VAEQAERASLKPAEQP 447
>gi|254446067|ref|ZP_05059543.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260375|gb|EDY84683.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 465
Score = 53.0 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 83/215 (38%), Gaps = 29/215 (13%)
Query: 43 GGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHID 102
G ++ +S+L++F K++ + ++L L K+ + N +D
Sbjct: 273 GVVMIPLLSMFFVAILLSILKLFEIKSVKSPKAGTLQRILDALNSGNKQEALEA-ANSVD 331
Query: 103 DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY 162
P+ + + + EL +E ++ E + + +
Sbjct: 332 GPFGDLLVAGVEHADQEKEL--------------------LEEVLYERLLAAQPKLERFI 371
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYS 218
I+ + P +G++G + G+I + + P L T I V+L T G+I++
Sbjct: 372 AFIALTAAASPLLGLLGTVTGMIDTFKAITVFGTGDPATLSTGISVALITTEYGLIVAIP 431
Query: 219 LCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
L + S K +L + ++A +A++NG
Sbjct: 432 CL--LAQALLSRIAK-GKLGEM-EQASVAFVNGLN 462
>gi|33285441|emb|CAD68978.1| ExbB-related protein [Photobacterium damselae subsp. piscicida]
Length = 454
Score = 52.6 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKL---KPYHA 164
I I L+N E + + + ++ +E L ++ I+ E+ K
Sbjct: 290 KIRQQISRQLKNPEQPSNNPLGRILSVYNKEQNRSVEALELRLMETIIDEQEGLEKGLSM 349
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+LG+I + L
Sbjct: 350 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLL 409
Query: 221 N 221
Sbjct: 410 L 410
>gi|304315157|ref|YP_003850304.1| biopolymer transport protein [Methanothermobacter marburgensis str.
Marburg]
gi|302588616|gb|ADL58991.1| predicted biopolymer transport protein [Methanothermobacter
marburgensis str. Marburg]
Length = 279
Score = 52.6 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+ +G E+E+ M+ + + K + + E P +G++G ++GI L
Sbjct: 91 LKIGYRNRSEVEDAMERVFIVEMSNMTKGLGTLRTIIEVAPMLGLIGTVIGIWYTFRALG 150
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
+ P + I V+L T+LG+ ++ + PL S I + ++K
Sbjct: 151 VNADPAAMAEGIYVALITTILGLAVA-IILMPLYSYITGRIDDEIDKIELIK 201
>gi|254442177|ref|ZP_05055653.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198256485|gb|EDY80793.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 439
Score = 52.6 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 81/215 (37%), Gaps = 14/215 (6%)
Query: 44 GFVMANPLKVIKD-SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHID 102
FV N V+ D S +LL+ F D ++ +++ L G +
Sbjct: 222 AFVAGNSQSVVIDPSQGALLQAFANTPDTSDRINQGGEVGLVIICLLAIGLVISGVRWV- 280
Query: 103 DPYNSTIFTSIPTVLEN--NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE--- 157
+ + + L++ + + +++ + +E L + + IL E
Sbjct: 281 --SLTIVQAKMKKQLKDLSKPGSNPVGRIIKVFQSFDRPDVSVETLELKIDEAILKETPQ 338
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGI 213
I + P +G++G ++G+I ++ + PK++ I +L T+LG+
Sbjct: 339 LEGGLSTIKILAAIAPLLGLLGTVVGMIATFQSITLFGTGDPKLMAGGISQALVTTVLGL 398
Query: 214 ILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
I + L + S ++ + + LIA
Sbjct: 399 IAAIPLVL-IHSFLQGISNRCIAIIEEQSAGLIAS 432
>gi|255022045|ref|ZP_05294051.1| hypothetical protein ACA_0839 [Acidithiobacillus caldus ATCC
51756]
gi|254968531|gb|EET26087.1| hypothetical protein ACA_0839 [Acidithiobacillus caldus ATCC
51756]
Length = 100
Score = 52.2 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLL 62
+GLF ++ +IG G +P + + IV G + V+ +PL+V+ S L
Sbjct: 27 LGLFGGVMALIGAGLVDGTSPLSFVNLAALCIVFGGTISATVVQHPLRVVVRSLAMLG 84
>gi|119946950|ref|YP_944630.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119865554|gb|ABM05031.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 332
Score = 52.2 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
NA + M+ + ++ + + + P +GI+G +LGII + L
Sbjct: 103 NALPFSPNEKMESYAERKIHNMSRGQTLLDTVITLAPMLGILGTVLGIIHSFNILGVQGV 162
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
+P + I +L T +G+ ++ P
Sbjct: 163 NNPTEVVAGIAQALVSTAMGLSVALLALLPF 193
>gi|15679040|ref|NP_276157.1| biopolymer transport protein [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3915401|sp|O27101|Y1022_METTH RecName: Full=Putative biopolymer transport protein exbB homolog
gi|2622125|gb|AAB85518.1| biopolymer transport protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 279
Score = 52.2 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+ +G E+E+ M+ + + + + + E P +G++G ++GI L
Sbjct: 91 LKIGYRNRSEVEDAMERVFIVEMSNMTRGLGTLRTIIEVAPMLGLIGTVIGIWYTFRALG 150
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
+ P + I V+L T+LG+ ++ + PL S I + ++K
Sbjct: 151 VNADPAAMAEGIYVALITTILGLAVA-IILMPLYSYITGRIDDEIDKIELIK 201
>gi|302878962|ref|YP_003847526.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302581751|gb|ADL55762.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 218
Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 131 RMIIVGNARSYEI-ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
R ++ EI E + ++++ I + ++ +G + P +G+ G + GI+ A+
Sbjct: 89 RQDLMHTGAPQEILERQLRQQVENIKRYHERGLAELATIGSTAPFVGLFGTVWGIMHALQ 148
Query: 190 NLSQSPK----ILGTAIGVSLTGTLLGIILS 216
++ QS ++ IG +L T +GI +
Sbjct: 149 SIGQSGAASLDVVAGPIGEALIATAIGIATA 179
>gi|94265095|ref|ZP_01288861.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93454425|gb|EAT04720.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 473
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
+E MDE I + + + I + P +G++G ++G+I+ +
Sbjct: 342 SKLSPEALEIRMDEAIHREIPKLERGLTTIKILAAVAPLLGLLGTVVGMIQTFQAITMFG 401
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+ P+++ I +L T LG+ ++ L + S + R I + +
Sbjct: 402 TGDPQLMAGGISQALVTTALGLSVAIPLIF-----LHSLAAAKSRYLINIMEG 449
>gi|261211672|ref|ZP_05925959.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
gi|260839022|gb|EEX65654.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
Length = 458
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 58/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + + +E L ++ ++ E+
Sbjct: 293 TLRQKIKAQLKNPEQPGDNPLGRILAVYNKEQQHSVEALELRLLEAVVDEQNHLETGLSM 352
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 353 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 412
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 413 L-AHNILSAQAETIRNILEKQGIGLVAQQA 441
>gi|269104635|ref|ZP_06157331.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161275|gb|EEZ39772.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 454
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
I I L+N E + + ++ +E L ++ I+ E+ K
Sbjct: 290 KIRQQINRQLKNPEQPGNNPLGRILSVYNKEQNRSVEALELRLMETIIDEQQGLEKGLSM 349
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+LG+I + L
Sbjct: 350 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLL 409
Query: 221 N 221
Sbjct: 410 L 410
>gi|94263160|ref|ZP_01286978.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93456531|gb|EAT06645.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 473
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
+E MDE I + + + I + P +G++G ++G+I+ +
Sbjct: 342 SKLSPEALEIRMDEAIHREIPKLERGLTTIKILAAVAPLLGLLGTVVGMIQTFQAITMFG 401
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+ P+++ I +L T LG+ ++ L + S + R I + +
Sbjct: 402 TGDPQLMAGGISQALVTTALGLSVAIPLIF-----LHSLAAAKSRYLINIMEG 449
>gi|315126909|ref|YP_004068912.1| MotA/TolQ/ExbB proton channel protein [Pseudoalteromonas sp.
SM9913]
gi|315015423|gb|ADT68761.1| MotA/TolQ/ExbB proton channel protein [Pseudoalteromonas sp.
SM9913]
Length = 454
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 5/161 (3%)
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+ ++L I K + Y ++ YI+ L G +D ++ +
Sbjct: 252 TRGAILRINTQKKSLMEYYEQGAEVGYIITVLLAVGLLIFLVRFVDLALTTSKIKAQLKN 311
Query: 117 LENNELTTFICDYMRMIIVG-NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
L + +++ N +E +DE I + I + P +
Sbjct: 312 LSTPNTNNPLGRILKVYSDNKNQDVENLELKLDEAILRETPRIEAGINIIKILAAIAPLL 371
Query: 176 GIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
G++G ++G+I + + PKI+ I ++L T LG
Sbjct: 372 GLLGTVIGMILTFQTITLFGTGDPKIMAGNISLALVTTALG 412
>gi|89095500|ref|ZP_01168408.1| MotA/TolQ/ExbB proton channel [Oceanospirillum sp. MED92]
gi|89080247|gb|EAR59511.1| MotA/TolQ/ExbB proton channel [Oceanospirillum sp. MED92]
Length = 460
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+ ++ + G ++E +DE I + + + I + P +G++G ++G
Sbjct: 313 NPLGRVLKAVSSGRMGLEQLELKVDESILKEVPKIERGQSIIKLLAAVAPLLGLLGTVIG 372
Query: 184 IIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+I ++ + PK++ I +L T+LG++++ L S + S + ++
Sbjct: 373 MIATFQSITLFGTSDPKLMAGGISQALMTTVLGLVVAIPLLFC-HSYLSSRSRRITQVLQ 431
Query: 240 IVKKALIAY 248
L+A
Sbjct: 432 EKSLGLLAS 440
>gi|260428635|ref|ZP_05782614.1| MotA/TolQ/ExbB proton channel [Citreicella sp. SE45]
gi|260423127|gb|EEX16378.1| MotA/TolQ/ExbB proton channel [Citreicella sp. SE45]
Length = 218
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+++ + + G + ++ E + + + + + P +G+ G
Sbjct: 73 HSRSYLKPVIALAFTGRCDA----GRLEAEAETRFARLESGFRFLDSVAQLSPLLGLFGT 128
Query: 181 ILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
+LG+I A L P IL I V+L T +G+ ++ L+ ++
Sbjct: 129 VLGMISAFQALQDAGSQVDPSILAGGIWVALLTTAVGLAVAMPTSLILSWFESRMEAERV 188
Query: 236 RLYIIVKKAL 245
++ AL
Sbjct: 189 LAERCIRSAL 198
>gi|149192232|ref|ZP_01870447.1| biopolymer transport protein ExbB-related protein [Vibrio shilonii
AK1]
gi|148833934|gb|EDL50956.1| biopolymer transport protein ExbB-related protein [Vibrio shilonii
AK1]
Length = 452
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E + E I + + + P +G++G + G+I+ ++Q P+
Sbjct: 327 EALELRLLESIMDEQQHLERGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNAEPR 386
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ I ++L T+LG+I + L + + S + L+A
Sbjct: 387 VMAGGISMALVTTVLGLITAMPLLL-AHNLLSSKAETIRNILERQSVGLVAEQA 439
>gi|313893836|ref|ZP_07827402.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
gi|313441400|gb|EFR59826.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
Length = 203
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 81 LLYILMYNLKKGSRN--ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+L+ + + R + ++ID NS + ++ ++N+ + ++ I+
Sbjct: 28 ILFERIRMYRNIDRELQQLSDNIDAGRNSNSWAALEQAVKNS--DDALSKFVSPIVDSVY 85
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS---P 195
+EN + + + + + + +S M P +G++G ++G+I++ + P
Sbjct: 86 SVEGLENRLHDVVGYMDERLKRGLNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAP 145
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ + +L T G+ ++
Sbjct: 146 TVITGGVSEALIATATGLSVA 166
>gi|119469532|ref|ZP_01612436.1| MotA/TolQ/ExbB proton channel family protein [Alteromonadales
bacterium TW-7]
gi|119447067|gb|EAW28337.1| MotA/TolQ/ExbB proton channel family protein [Alteromonadales
bacterium TW-7]
Length = 454
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 61/161 (37%), Gaps = 5/161 (3%)
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+ ++L I K + Y ++ YI+ L G ID ++ S
Sbjct: 252 TRGAILRINTQKKTLMEYYEQGAEVGYIITVLLAVGLLIFLVRFIDLALTTSKIKSQLKN 311
Query: 117 LENNELTTFICDYMRMIIVGNARSYE-IENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
L + +++ ++ E +E +DE I + I + P +
Sbjct: 312 LSTPNTNNPLGRILKVYHDNKSQDVENLELKLDEAILRETPRVEAGINIIKILAAIAPLL 371
Query: 176 GIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
G++G ++G+I + + PKI+ I ++L T LG
Sbjct: 372 GLLGTVIGMILTFQTITLFGTGDPKIMAGNISLALVTTALG 412
>gi|27597189|dbj|BAC55123.1| probable TolR protein [Vibrio parahaemolyticus]
Length = 452
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 58/147 (39%), Gaps = 8/147 (5%)
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISH 167
I T L+N + + N + +E L ++ ++ E+ K +
Sbjct: 288 QKIATELKNPTKAEDNPLGRVLSVYQNDKHRSVEALELRLLEAVVDEQTHLEKGLSMLKL 347
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
+ P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L
Sbjct: 348 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLL-A 406
Query: 224 TSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + S + L+A
Sbjct: 407 HNVLSSQAESIRNILEKQGIGLVAEQA 433
>gi|146308885|ref|YP_001189350.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145577086|gb|ABP86618.1| outer membrane transport energization protein ExbB [Pseudomonas
mendocina ymp]
Length = 449
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 142 EIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----S 194
++E L + + IL E K + + P +G++G + G+I ++Q
Sbjct: 328 DLETLELKLDEAILQETPPLEKGQGLLKLLAAVAPLLGLLGTVTGMIVTFQAITQSGGGD 387
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA-YMNGAI 253
+++ I +L T+LG++++ L L S + S ++ LIA +++GA
Sbjct: 388 SRLMADGISQALVTTVLGLVVAIPLLF-LHSLLASRSKGLIQILEQQSAGLIALHLSGAP 446
>gi|308048883|ref|YP_003912449.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
gi|307631073|gb|ADN75375.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
Length = 452
Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 8/115 (6%)
Query: 140 SYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E L + + IL E + I M P +G++G + G+I+ N+ +
Sbjct: 331 DVDVETLELKIDEAILKETPRIESGVNMIKVMAAISPMLGLLGTVTGMIETFQNITLFGT 390
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
PKI+ I ++L T+LG++ + L + + + + +IA
Sbjct: 391 GDPKIMAGGISMALVTTVLGLVAALPLLL-MHALVAGRAKSVVEVIEEQSAGIIA 444
>gi|330831693|ref|YP_004394645.1| TonB system biopolymer transport component [Aeromonas veronii B565]
gi|328806829|gb|AEB52028.1| TonB system biopolymer transport component [Aeromonas veronii B565]
Length = 434
Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E +DE I + + + P +G++G + G+I ++Q PK
Sbjct: 311 ETLELRLDEAILQETPRMERGIGMVKVIAAIAPMLGLLGTVTGMIGTFQAITQFGTGDPK 370
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
I+ I ++L T+ G++ + L S ++S + + ++A
Sbjct: 371 IMAGGISMALVTTVQGLVAAIPLIL-AHSLLQSRFTELSNVLEQQVAGILA 420
>gi|254506695|ref|ZP_05118835.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
parahaemolyticus 16]
gi|219550276|gb|EED27261.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
parahaemolyticus 16]
Length = 454
Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 66/168 (39%), Gaps = 11/168 (6%)
Query: 93 SRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDY--MRMIIVGNARSYE-IENLMDE 149
I ++F + +++ + + D R++ V + +E L
Sbjct: 269 GLLAIGLIIALVRGVSLFIARQKIVKQLKSPSQPSDNPLGRILSVYQKDKHRSVEALELR 328
Query: 150 EIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
+++++ E+ K + + P +G++G + G+I+ ++Q PK++ I
Sbjct: 329 LLEVVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNSDPKVMAGGI 388
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++L T+LG++ + L + + S + L+A
Sbjct: 389 SMALVTTVLGLVAAMPLLL-AHNLLSSQSENIRHILEKQGIGLVAEQA 435
>gi|54302899|ref|YP_132892.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum SS9]
gi|46916323|emb|CAG23092.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum SS9]
Length = 454
Score = 50.3 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E + E I E K + + P +G++G + G+I+ ++Q PK
Sbjct: 335 EALELRLLEAIVDEQQELEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 394
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCN 221
++ I +L T+LG+I + L
Sbjct: 395 VMAGGISTALVTTVLGLISAMPLLL 419
>gi|89901922|ref|YP_524393.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89346659|gb|ABD70862.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 221
Score = 50.3 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS---- 194
E+ + M+ ++ + K +A++ + + P +G+ G ++G+I+ G+ S
Sbjct: 99 SEDELRSTMESTGRLVAHRLEKYLNALATIASAAPLMGLFGTVVGMIEIFGSQSTPGGAT 158
Query: 195 ---PKILGTAIGVSLTGTLLGIILS 216
P L I ++L T G+I++
Sbjct: 159 GGNPAQLAHGISIALYNTAFGLIVA 183
>gi|330505169|ref|YP_004382038.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
gi|328919455|gb|AEB60286.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
Length = 449
Score = 50.3 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 142 EIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----S 194
++E L + + IL E K + + P +G++G + G+I ++Q
Sbjct: 328 DLETLELKLDEAILQETPPLEKGQGLLKLLAAVAPLLGLLGTVTGMIVTFQAITQSGGGD 387
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA-YMNGAI 253
+++ I +L T+LG++++ L L S + S ++ LIA +++GA
Sbjct: 388 SRLMADGISQALVTTVLGLVVAIPLLF-LHSLLASRSKGLIQILEQQSAGLIALHLSGAP 446
>gi|90414112|ref|ZP_01222094.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum 3TCK]
gi|90324784|gb|EAS41317.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum 3TCK]
Length = 449
Score = 50.3 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDII---LYEKLKPYHAISHMGESLPAIGIVGAIL 182
I + + + +E L ++ I E K + + P +G++G +
Sbjct: 312 ILKVYSLGVNKKEQPRSVEALELRLLEAIVDEQQEIEKGLSMLKLLAALAPMLGLLGTVT 371
Query: 183 GIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCN 221
G+I+ ++Q PK++ I +L T+LG+I + L
Sbjct: 372 GMIETFQVITQFGNGDPKVMAGGISTALVTTVLGLISAMPLLL 414
>gi|269797127|ref|YP_003311027.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282849482|ref|ZP_06258867.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|269093756|gb|ACZ23747.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282581186|gb|EFB86584.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
Length = 203
Score = 50.3 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
+ + ID NS ++++ ++N+ + ++ I+ + +EN + + +
Sbjct: 43 LQQLSDSIDAGRNSNNWSTLENSIKNS--DDALSRFVSPIVESVYSAEGLENRLHDVVGY 100
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS---PKILGTAIGVSLTGTL 210
+ + + +S M P +G++G ++G+I++ + P ++ + +L T
Sbjct: 101 MDERLKRGLNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAPTVITGGVSEALVATA 160
Query: 211 LGIILS 216
G+ ++
Sbjct: 161 TGLSVA 166
>gi|330448370|ref|ZP_08312018.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492561|dbj|GAA06515.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 455
Score = 50.3 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
TI I L+N + + + ++ +E L ++ I+ E+ K
Sbjct: 288 TIKQQIKKQLKNPDQVGNNPLGRVLAVYNKEQNRSVEALELRLLEAIVDEQQGLEKGLSM 347
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ P +G++G + G+I+ ++Q PK++ I ++L T+LG+I + L
Sbjct: 348 LKLFAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLL 407
Query: 221 N 221
Sbjct: 408 L 408
>gi|294793299|ref|ZP_06758445.1| biopolymer transport protein [Veillonella sp. 6_1_27]
gi|294794670|ref|ZP_06759805.1| biopolymer transport protein [Veillonella sp. 3_1_44]
gi|294454032|gb|EFG22406.1| biopolymer transport protein [Veillonella sp. 3_1_44]
gi|294456244|gb|EFG24608.1| biopolymer transport protein [Veillonella sp. 6_1_27]
Length = 204
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
+ + ID NS ++++ ++N+ + ++ I+ + +EN + + +
Sbjct: 44 LQQLSDSIDAGRNSNNWSTLENSIKNS--DDALSRFVSPIVESVYSAEGLENRLHDVVGY 101
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS---PKILGTAIGVSLTGTL 210
+ + + +S M P +G++G ++G+I++ + P ++ + +L T
Sbjct: 102 MDERLKRGLNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAPTVITGGVSEALVATA 161
Query: 211 LGIILS 216
G+ ++
Sbjct: 162 TGLSVA 167
>gi|148643038|ref|YP_001273551.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Methanobrevibacter smithii ATCC 35061]
gi|222445275|ref|ZP_03607790.1| hypothetical protein METSMIALI_00903 [Methanobrevibacter smithii
DSM 2375]
gi|261350166|ref|ZP_05975583.1| biopolymer transport protein [Methanobrevibacter smithii DSM 2374]
gi|148552055|gb|ABQ87183.1| biopolymer transport protein, MotA/TolQ/ExbB proton channel family
[Methanobrevibacter smithii ATCC 35061]
gi|222434840|gb|EEE42005.1| hypothetical protein METSMIALI_00903 [Methanobrevibacter smithii
DSM 2375]
gi|288860952|gb|EFC93250.1| biopolymer transport protein [Methanobrevibacter smithii DSM 2374]
Length = 279
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 83/203 (40%), Gaps = 25/203 (12%)
Query: 40 AGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN 99
G+ +++ I VSL +I K + + ++L ++ M ++G E
Sbjct: 20 GGIITYIILFIG--IYGLLVSLRKIVYLKKISKVDTTEILGIVSSSM---ERGGAVEALK 74
Query: 100 HIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKL 159
I+ N ++ I + +++ G E+E M++ + + +
Sbjct: 75 QINSFKNP--------------ISKIISETLKI---GYKNKTEVEESMEQIFIVEVSKMT 117
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNLS--QSPKILGTAIGVSLTGTLLGIILSY 217
K ++I + E P +G++G ++GI L +P + I V+LT T+ G+ ++
Sbjct: 118 KGLNSIKTIIELAPFLGLIGTVIGIWMTFKALGVTPNPSAMAEGIYVALTTTIAGLFVA- 176
Query: 218 SLCNPLTSQIKSTRLKQHRLYII 240
+ PL + I+ + +
Sbjct: 177 IVLLPLHTYIQGLVENEMDKIEL 199
>gi|28900007|ref|NP_799662.1| biopolymer transport protein ExbB-like protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|153838785|ref|ZP_01991452.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|260362142|ref|ZP_05775137.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260880586|ref|ZP_05892941.1| transporter, MotA/TolQ/ExbB proton channel family [Vibrio
parahaemolyticus AN-5034]
gi|260896327|ref|ZP_05904823.1| protein TtpC [Vibrio parahaemolyticus Peru-466]
gi|260899742|ref|ZP_05908137.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|28808290|dbj|BAC61495.1| biopolymer transport protein ExbB-related protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|149747765|gb|EDM58659.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|308085149|gb|EFO34844.1| protein TtpC [Vibrio parahaemolyticus Peru-466]
gi|308092502|gb|EFO42197.1| transporter, MotA/TolQ/ExbB proton channel family [Vibrio
parahaemolyticus AN-5034]
gi|308110437|gb|EFO47977.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|308114662|gb|EFO52202.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|328469992|gb|EGF40903.1| biopolymer transport protein ExbB-like protein [Vibrio
parahaemolyticus 10329]
Length = 455
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 8/147 (5%)
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISH 167
I L+N + + N + +E L ++ ++ E+ K +
Sbjct: 291 QKIAKQLKNPTKAEDNPLGRVLSVYQNDKHRSVEALELRLLEAVVDEQTHLEKGLSMLKL 350
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
+ P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L
Sbjct: 351 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLL-A 409
Query: 224 TSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + S + L+A
Sbjct: 410 HNVLSSQAESIRNILEKQGIGLVAEQA 436
>gi|146281205|ref|YP_001171358.1| TonB system biopolymer transport component [Pseudomonas stutzeri
A1501]
gi|145569410|gb|ABP78516.1| TonB system biopolymer transport component [Pseudomonas stutzeri
A1501]
Length = 448
Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 142 EIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----S 194
++E L + + IL E + + + P +G++G + G+I ++Q
Sbjct: 327 DLETLELKLDEAILQETPPLERGQPLLKLLAAVAPLLGLLGTVTGMIITFQAITQSGGGD 386
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA-YMNGAI 253
+++ I +L T+LG++++ L L S + S +L LIA +++GA
Sbjct: 387 SRLMADGISQALVTTVLGLVVAIPLLF-LHSLLASRSKALIQLLEQQSAGLIALHLSGAP 445
>gi|90407105|ref|ZP_01215294.1| MotA/TolQ/ExbB family proton channel protein [Psychromonas sp.
CNPT3]
gi|90311827|gb|EAS39923.1| MotA/TolQ/ExbB family proton channel protein [Psychromonas sp.
CNPT3]
Length = 237
Score = 49.9 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
Query: 127 CDYMRMIIVG-NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
++M+I G A + + M D + + + + P +GI+G +LGII
Sbjct: 83 TPRLKMLIEGIQALPFIGTDKMSAYADAKIDNMARGQSVLDTIITMAPMLGILGTVLGII 142
Query: 186 KAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+ LS P + I +L T +G+ ++ P + +S K V
Sbjct: 143 DSFHILSLQGVDDPTAVVGGIAQALISTAMGLCVALLALLPY-NLFRSFLQKLTLRLECV 201
>gi|148977293|ref|ZP_01813907.1| biopolymer transport protein ExbB-related protein [Vibrionales
bacterium SWAT-3]
gi|145963406|gb|EDK28670.1| biopolymer transport protein ExbB-related protein [Vibrionales
bacterium SWAT-3]
Length = 458
Score = 49.9 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + ++ +E L ++ ++ E+ K + + P +G++G + G+I+
Sbjct: 317 LAVYNKEQNQTVEALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETF 376
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ I ++L T+LG++ + L L I ST+ + R I+ K+
Sbjct: 377 QVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLL--LAHNILSTQAENIRN-ILEKQG 433
Query: 245 L 245
+
Sbjct: 434 I 434
>gi|327479358|gb|AEA82668.1| TonB system biopolymer transport component [Pseudomonas stutzeri
DSM 4166]
Length = 448
Score = 49.9 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 142 EIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----S 194
++E L + + IL E + + + P +G++G + G+I ++Q
Sbjct: 327 DLETLELKLDEAILQETPPLERGQPLLKLLAAVAPLLGLLGTVTGMIITFQAITQSGGGD 386
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA-YMNGAI 253
+++ I +L T+LG++++ L L S + S +L LIA +++GA
Sbjct: 387 SRLMADGISQALVTTVLGLVVAIPLLF-LHSLLASRSKALIQLLEQQSAGLIALHLSGAP 445
>gi|89075637|ref|ZP_01162038.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium sp. SKA34]
gi|89048644|gb|EAR54217.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium sp. SKA34]
Length = 455
Score = 49.9 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + ++ +E L ++ I+ E+ K + P +G++G + G+I+
Sbjct: 312 LAVYNKEQNRSVEALELRLLEAIVDEQQGLEKGLSMLKLFAALAPMLGLLGTVTGMIETF 371
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ I ++L T+LG+I + L L + ST+ + RL I+ K+
Sbjct: 372 QVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLL--LAHNVLSTQAENIRL-ILEKQG 428
Query: 245 --LIAYMNGAI 253
L+A
Sbjct: 429 ISLVAQQAEKN 439
>gi|90577869|ref|ZP_01233680.1| putative biopolymer transport protein ExbB-related protein [Vibrio
angustum S14]
gi|90440955|gb|EAS66135.1| putative biopolymer transport protein ExbB-related protein [Vibrio
angustum S14]
Length = 455
Score = 49.9 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + ++ +E L ++ I+ E+ K + P +G++G + G+I+
Sbjct: 312 LAVYNKEQNRSVEALELRLLEAIVDEQQGLEKGLSMLKLFAALAPMLGLLGTVTGMIETF 371
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ I ++L T+LG+I + L L + ST+ + RL I+ K+
Sbjct: 372 QVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLL--LAHNVLSTQAENIRL-ILEKQG 428
Query: 245 --LIAYMNGAI 253
L+A
Sbjct: 429 ISLVAQQAEKN 439
>gi|117621306|ref|YP_858668.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117562713|gb|ABK39661.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 435
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E +DE I + + + P +G++G + G+I ++Q PK
Sbjct: 312 ETLELRLDEAILQETPRMERGIGMVKVIAAIAPMLGLLGTVTGMIGTFQAITQFGTGDPK 371
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
I+ I ++L T+ G++ + L S ++S + + ++A
Sbjct: 372 IMAGGISMALVTTVQGLVAAIPLIL-AHSLLQSRFTELSNVLEQQVAGILA 421
>gi|269961386|ref|ZP_06175751.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833937|gb|EEZ88031.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 455
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 56/147 (38%), Gaps = 8/147 (5%)
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISH 167
I L+N + + + +E L ++ ++ E+ K +
Sbjct: 291 QKIAKQLKNPTQPEDNPLGRILAVYQKDKHRSVEALELRLLEAVVDEQTHLEKGLSMLKL 350
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
+ P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L
Sbjct: 351 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLL-A 409
Query: 224 TSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + S + L+A
Sbjct: 410 HNVLSSQAENIRNILEKQGIGLVAEQA 436
>gi|84393272|ref|ZP_00992033.1| biopolymer transport protein ExbB-related protein [Vibrio
splendidus 12B01]
gi|84376097|gb|EAP92984.1| biopolymer transport protein ExbB-related protein [Vibrio
splendidus 12B01]
Length = 458
Score = 49.9 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + ++ +E L ++ ++ E+ K + + P +G++G + G+I+
Sbjct: 317 LAVYNKEQNQTVEALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETF 376
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ I ++L T+LG++ + L + + + +
Sbjct: 377 QVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLL-AHNILSTQSENIRNILEKQGIG 435
Query: 245 LIAYMN 250
L+A
Sbjct: 436 LVAEQA 441
>gi|90581004|ref|ZP_01236805.1| TolR [Vibrio angustum S14]
gi|90437882|gb|EAS63072.1| TolR [Vibrio angustum S14]
Length = 453
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPRIERFVGSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y+L + + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTLVHSKSRRLIQTLEEQSAGFI 441
>gi|330883362|gb|EGH17511.1| flagellar motor protein [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 43
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAG 41
++IGL + + IIGG + GG+ L+ +IV G
Sbjct: 4 LSLIGLILAFVAIIGGNFLEGGHLGALLNGPAALIVLGGT 43
>gi|296136138|ref|YP_003643380.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|294340373|emb|CAZ88754.1| putative Biopolymer transport protein MotA/TolQ/ExbB [Thiomonas sp.
3As]
gi|295796260|gb|ADG31050.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 206
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+ +N+ L + R + +A + ++ ++ +Y K +A++ + + P
Sbjct: 63 KLEQNSPLGAVLASGFRSVARPHASAAGLQEDLENAGRNQVYRLQKYLNALATVASAAPL 122
Query: 175 IGIVGAILGIIKAMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
+G++G ++G+I+ G+ P +L I V+L T LG+I++
Sbjct: 123 LGLLGTVVGMIEIFGSQSTAGTDPTVLAHGISVALYNTALGLIVA 167
>gi|85712661|ref|ZP_01043707.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85693511|gb|EAQ31463.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 456
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 65/174 (37%), Gaps = 20/174 (11%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
++ L ++ + G +I++P + + V N+ N
Sbjct: 293 IISLFKLVTLTVVGGKMRSQLKNIENPSDKNPLGRVLKVYHENK---------------N 337
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
A + +E +DE I + + + P +G++G ++G+I ++ +
Sbjct: 338 ADAENLELKLDEAIMRETPKIESGINVVKIFAAIAPLLGLLGTVVGMIGTFQSITLFGTG 397
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
PKI+ I ++L T +G+I + L S + S L ++A
Sbjct: 398 DPKIMAGDISMALVTTAMGLIAAIPLIL-AHSIVASRSKSIIHLLDEQAAGIVA 450
>gi|262199187|ref|YP_003270396.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262082534|gb|ACY18503.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 227
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 58/165 (35%), Gaps = 5/165 (3%)
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
I +++ Y+ + V L L +R + H D P + + +
Sbjct: 28 IAMVYIAIERFIVYRKAATQNFSFVTALKDYLAKRRLDDARKAADRHKDSPVATVVGQGL 87
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
+ E + + + ++ + + K + ++ + P
Sbjct: 88 EAYQKGREAQ---KEAGPDDVGDFDLVDSVNRALERVKEREVSSLRKGLNVLATVASIAP 144
Query: 174 AIGIVGAILGIIKAMGNL--SQSPKILGTAIGVSLTGTLLGIILS 216
+G+ G +LGII A L +++G I +L T G++++
Sbjct: 145 FVGLFGTVLGIINAFELLKGGGGMEVIGPGIAEALVSTAFGLLVA 189
>gi|291613856|ref|YP_003524013.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583968|gb|ADE11626.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 218
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
A +E ++ +++ I + ++ +G + P IG+ G + GI+ A+ ++ +S
Sbjct: 95 SGAPQDVLERMLRQQLQNIQRYHERGLAELASIGSTSPFIGLFGTVWGIMHALQDIGRSG 154
Query: 196 K----ILGTAIGVSLTGTLLGI------ILSYSLCN 221
++ IG +L T +GI +L+Y+
Sbjct: 155 SASLDVVAGPIGEALIATAIGIATALPAVLAYNFFL 190
>gi|170522212|gb|ACB20384.1| TtpC [Vibrio alginolyticus]
Length = 454
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E + E + K + + P +G++G + G+I+ ++Q PK
Sbjct: 323 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 382
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ I ++L T+LG++ + L + + S + L+A
Sbjct: 383 VMAGGISMALVTTVLGLVSAMPLLL-AHNVLSSQAENIRSILEKQGIGLVAEQA 435
>gi|116691633|ref|YP_837166.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|116649633|gb|ABK10273.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia HI2424]
Length = 238
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+E + ++I + ++ +G + P +G+ G + GII A+ + S S ++
Sbjct: 100 LERHLRQQIHNARRREEAGLAVLASIGSTAPFVGLFGTVFGIIHALTAITHSASASIDVV 159
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T +GI ++
Sbjct: 160 AGPIGEALVATGIGIAVA 177
>gi|304312898|ref|YP_003812496.1| TolQ-related transport transmembrane protein [gamma proteobacterium
HdN1]
gi|301798631|emb|CBL46863.1| TolQ-related transport transmembrane protein [gamma proteobacterium
HdN1]
Length = 249
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 19/153 (12%)
Query: 82 LYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTF----------ICDYMR 131
+ +L SR EN ++ + S I S V NNE + ++ R
Sbjct: 56 IIWQRRSLLGESRRAAEN-FEERFWSGIDLSRLFVQVNNEPDHYSGHEAIFRAGFKEFAR 114
Query: 132 MIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
+ VGNA I E M + ++ +G P IG+ G + GI+ A
Sbjct: 115 LRKVGNAEPDSIMAGAERAMKVALLKEQERLEANLSFLATVGSVSPYIGLFGTVWGIMHA 174
Query: 188 MGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
NL+ + I +L T +G++ +
Sbjct: 175 FINLANQNQATLSAVAPGIAEALIATAIGLVAA 207
>gi|206562421|ref|YP_002233184.1| transport protein [Burkholderia cenocepacia J2315]
gi|198038461|emb|CAR54419.1| transport protein [Burkholderia cenocepacia J2315]
Length = 238
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+E + ++I + ++ +G + P +G+ G + GII A+ + S S ++
Sbjct: 100 LERHLRQQIHNARRREEAGLAVLASIGSTAPFVGLFGTVFGIIHALTAITHSASASIDVV 159
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T +GI ++
Sbjct: 160 AGPIGEALVATGIGIAVA 177
>gi|302391557|ref|YP_003827377.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
gi|302203634|gb|ADL12312.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
Length = 205
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG--NLSQS 194
+ EIE M E + K ++ +G+ P++G++G + G+IK ++S
Sbjct: 83 DKEPEEIEEQMAEVELEEFPKLEKHLGLLNFIGKISPSLGLLGTVTGMIKTFHVLSMSGK 142
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNP---LTSQIKSTR-LKQHRLYIIV 241
P+ L I +LT T G+++S T++++ + R ++
Sbjct: 143 PEQLAQGISEALTTTATGLVISIPALGAYYYFTNKLQQIALHTEKREKELI 193
>gi|82618530|gb|AAO67510.2| putative ExbB [Pseudomonas syringae pv. tagetis]
Length = 230
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++I ++ +G + P IG+ G + GII A+ +SQ S ++
Sbjct: 98 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALSAISQARSASIAVV 157
Query: 199 GTAIGVSLTGTLLGI------ILSYSLCN 221
IG +L T +GI +L+Y+
Sbjct: 158 AGPIGEALVATGVGIAVAVPAVLAYNFFG 186
>gi|54302374|ref|YP_132367.1| putative biopolymer transport proteinexbb-related protein
[Photobacterium profundum SS9]
gi|46915796|emb|CAG22567.1| putative biopolymer transport proteinExbB-related protein
[Photobacterium profundum SS9]
Length = 455
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 128 DYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
D +E + E I K + + P +G++G + G+I+
Sbjct: 323 DNKERYTEQGRSVEALELRLLETIVDEQQHLEKGLSMLKLLAALAPMLGLLGTVTGMIET 382
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCN 221
++Q PK++ I ++L T+LG++ + L
Sbjct: 383 FQVITQFGNGDPKVMAGGISMALITTVLGLVAAMPLLL 420
>gi|330899683|gb|EGH31102.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330940953|gb|EGH43894.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 230
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++I ++ +G + P IG+ G + GII A+ +SQ S ++
Sbjct: 98 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALSAISQAKSASIAVV 157
Query: 199 GTAIGVSLTGTLLGI------ILSYSLCN 221
IG +L T +GI +L+Y+
Sbjct: 158 AGPIGEALVATGVGIAVAVPAVLAYNFFG 186
>gi|91228114|ref|ZP_01262156.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 12G01]
gi|91188232|gb|EAS74532.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 12G01]
Length = 455
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E + E + K + + P +G++G + G+I+ ++Q PK
Sbjct: 324 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ I ++L T+LG++ + L + + S + L+A
Sbjct: 384 VMAGGISMALVTTVLGLVSAMPLLL-AHNVLSSQAENIRSILEKQGIGLVAEQA 436
>gi|163803222|ref|ZP_02197103.1| biopolymer transport protein ExbB-related protein [Vibrio sp. AND4]
gi|159172977|gb|EDP57813.1| biopolymer transport protein ExbB-related protein [Vibrio sp. AND4]
Length = 455
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E + E + K + + P +G++G + G+I+ ++Q PK
Sbjct: 324 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ I ++L T+LG++ + L + + S + L+A
Sbjct: 384 VMAGGISMALVTTVLGLVAAMPLLL-AHNVLSSQAENIRNILEKQGIGLVAEQA 436
>gi|262402226|ref|ZP_06078787.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
gi|262351008|gb|EEZ00141.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
Length = 458
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 293 TLRQKIKAQLKNPEQPGDNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 352
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 353 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 412
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 413 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 441
>gi|209808938|ref|YP_002264476.1| biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
gi|208010500|emb|CAQ80866.1| biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
Length = 451
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 109 IFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAI 165
I I T L++ + + ++ +E L ++ I+ E+ K +
Sbjct: 291 IRQQIRTQLKDPAHIGNNPLGRVLSVYDAEKTRSVEALELRLLETIVDEQQGLEKGLSML 350
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L
Sbjct: 351 KLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLL 410
>gi|170736366|ref|YP_001777626.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169818554|gb|ACA93136.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 238
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+E + ++I + ++ +G + P +G+ G + GII A+ + S S ++
Sbjct: 100 LERHLRQQIHNARRREEAGLAVLASIGSTAPFVGLFGTVFGIIHALTAITHSASASIDVV 159
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T +GI ++
Sbjct: 160 AGPIGEALVATGIGIAVA 177
>gi|66047708|ref|YP_237549.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63258415|gb|AAY39511.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 230
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++I ++ +G + P IG+ G + GII A+ +SQ S ++
Sbjct: 98 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALSAISQAKSASIAVV 157
Query: 199 GTAIGVSLTGTLLGI------ILSYSLCN 221
IG +L T +GI +L+Y+
Sbjct: 158 AGPIGEALVATGVGIAVAVPAVLAYNFFG 186
>gi|163760175|ref|ZP_02167258.1| MotA/TolQ/ExbB proton channel [Hoeflea phototrophica DFL-43]
gi|162282574|gb|EDQ32862.1| MotA/TolQ/ExbB proton channel [Hoeflea phototrophica DFL-43]
Length = 231
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 10/187 (5%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFIC-DYMRMIIVG 136
V+ L + G+R+ +E + + + + T I + +++
Sbjct: 35 VILLKFFQFARAGIGARSRSERAVALFVSGRVREAHDLAALGRNPTAVIVAQAIELVMAK 94
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
IE + L+E + + + + P +G+ G +LG+I+A +L
Sbjct: 95 RLDKQAIEERLTRIATTRLHELQSGFRFLDSVAQLAPLMGLFGTVLGMIEAFKDLQSAGD 154
Query: 194 --SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
P +L I V+L T +G+ ++ + L ++ + + + G
Sbjct: 155 AVDPSLLAGGIWVALLTTAVGLAIAMPVSLILAWFETRVESERVAVQTLTTD----ILTG 210
Query: 252 AIPQVAI 258
P V+
Sbjct: 211 VSPVVSE 217
>gi|145301146|ref|YP_001143987.1| TonB system biopolymer transport component [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142853918|gb|ABO92239.1| TonB system biopolymer transport component [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 431
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E +DE I + + + P +G++G + G+I ++Q PK
Sbjct: 308 ETLELRLDEAILQETPRMERGIGMVKVIAAIAPMLGLLGTVTGMIGTFQAITQFGTGDPK 367
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
I+ I ++L T+ G++ + L S ++S + + ++A
Sbjct: 368 IMAGGISMALITTVQGLVAAIPLIL-AHSLLQSRFTELSNVLEQQVAGILA 417
>gi|197337647|ref|YP_002157783.1| TolQ protein [Vibrio fischeri MJ11]
gi|197314899|gb|ACH64348.1| TolQ protein [Vibrio fischeri MJ11]
Length = 451
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 109 IFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAI 165
I I L+ + + + + +E L ++ I+ E+ K +
Sbjct: 291 IRQQIRKQLKQPQELGQNPLGRVLAVYDAEKQRSVEALELRLLETIVDEQQGLEKGLSML 350
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L
Sbjct: 351 KLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLL 410
>gi|171318263|ref|ZP_02907424.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171096527|gb|EDT41423.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 238
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+E + ++I + ++ +G + P +G+ G + GII A+ + S S ++
Sbjct: 100 LERHLRQQIHNARRREEAGLAVLASIGSTAPFVGLFGTVFGIIHALTAITHSASASIDVV 159
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T +GI ++
Sbjct: 160 AGPIGEALVATGIGIAVA 177
>gi|50084751|ref|YP_046261.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
gi|49530727|emb|CAG68439.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
Length = 244
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+R +E + ++I + K ++ +G + P IG+ G + GII A+ + +
Sbjct: 95 SRQDLLERHLRKQILSERRQLEKGSALLASIGNNAPFIGLFGTVFGIIHALQAIAHSGNA 154
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
S ++ IG +L T +GI ++
Sbjct: 155 SMDVVAGPIGEALVATGIGIAVA 177
>gi|262275429|ref|ZP_06053239.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
gi|262220674|gb|EEY71989.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
Length = 448
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + N ++ L ++ I+ E+ K + + P +G++G + G+I+
Sbjct: 311 LNVYANEPDRSLDTLELRLMEAIMDEQQHFEKGLSMLKLLAALAPMLGLLGTVTGMIETF 370
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q P I+ I ++L T++G++ + L + + + + V +
Sbjct: 371 QVITQYGNGDPTIMAGGISMALVTTVMGLVAAIPLLL-AHNVLSTQADTLRGMLEKVGVS 429
Query: 245 LIAYMN 250
L+A +
Sbjct: 430 LVAEQS 435
>gi|90414941|ref|ZP_01222904.1| putative biopolymer transport protein; ExbB-related protein
[Photobacterium profundum 3TCK]
gi|90323941|gb|EAS40539.1| putative biopolymer transport protein; ExbB-related protein
[Photobacterium profundum 3TCK]
Length = 455
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 128 DYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
D +E + E I K + + P +G++G + G+I+
Sbjct: 323 DNKERYTEQGRSVEALELRLLETIVDEQQHLEKGLSMLKLLAALAPMLGLLGTVTGMIET 382
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCN 221
++Q PK++ I ++L T+LG++ + L
Sbjct: 383 FQVITQFGNGDPKVMAGGISMALITTVLGLVAAMPLLL 420
>gi|153834893|ref|ZP_01987560.1| TolR [Vibrio harveyi HY01]
gi|148868664|gb|EDL67746.1| TolR [Vibrio harveyi HY01]
Length = 455
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 56/147 (38%), Gaps = 8/147 (5%)
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISH 167
I L+N + + + +E L ++ ++ E+ K +
Sbjct: 291 QKIAKQLKNPAQPEDNPLGRILAVYQKDKHRSVEALELRLLEAVVDEQTHLEKGLSMLKL 350
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
+ P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L
Sbjct: 351 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLL-A 409
Query: 224 TSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + S + L+A
Sbjct: 410 HNVLSSQAENIRNILEKQGIGLVAEQA 436
>gi|254227866|ref|ZP_04921296.1| Biopolymer transport proteins [Vibrio sp. Ex25]
gi|262396145|ref|YP_003287998.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
gi|151939362|gb|EDN58190.1| Biopolymer transport proteins [Vibrio sp. Ex25]
gi|262339739|gb|ACY53533.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
Length = 455
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E + E + K + + P +G++G + G+I+ ++Q PK
Sbjct: 324 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ I ++L T+LG++ + L + + S + L+A
Sbjct: 384 VMAGGISMALVTTVLGLVSAMPLLL-AHNVLSSQAENIRSILEKQGIGLVAEQA 436
>gi|325122250|gb|ADY81773.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
calcoaceticus PHEA-2]
Length = 229
Score = 49.1 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+R +E + ++I + K ++ +G + P IG+ G + GII A+ + +
Sbjct: 80 SRQDLLERHLRKQILSERRQLEKGSALLASIGNNAPFIGLFGTVFGIIHALQAIAHSGNA 139
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
S ++ IG +L T +GI ++
Sbjct: 140 SMDVVAGPIGEALVATGIGIAVA 162
>gi|299770153|ref|YP_003732179.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
gi|298700241|gb|ADI90806.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
Length = 244
Score = 49.1 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+R +E + ++I + K ++ +G + P IG+ G + GII A+ + +
Sbjct: 95 SRQDLLERHLRKQILSERRQLEKGSALLASIGNNAPFIGLFGTVFGIIHALQAIAHSGNA 154
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
S ++ IG +L T +GI ++
Sbjct: 155 SMDVVAGPIGEALVATGIGIAVA 177
>gi|114766614|ref|ZP_01445566.1| MotA/TolQ/ExbB proton channel family protein [Pelagibaca
bermudensis HTCC2601]
gi|114541154|gb|EAU44207.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp.
HTCC2601]
Length = 222
Score = 49.1 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTA 201
+D E + + + + + + + P +G+ G +LG+I A L P IL
Sbjct: 99 LDAEAETRFAKLERGFRFLDSVAQLSPLMGLFGTVLGMISAFQALQDAGSQVDPSILAGG 158
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
I V+L T +G+ ++ P + + + ++ +KAL + +
Sbjct: 159 IWVALMTTAVGLAVA----MPTSVVLSWFETRMEAERVLAEKALRSIQS 203
>gi|269966637|ref|ZP_06180717.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 40B]
gi|269828759|gb|EEZ83013.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 40B]
Length = 455
Score = 49.1 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E + E + K + + P +G++G + G+I+ ++Q PK
Sbjct: 324 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ I ++L T+LG++ + L + + S + L+A
Sbjct: 384 VMAGGISMALVTTVLGLVSAMPLLL-AHNVLSSQAENIRSILEKQGIGLVAEQA 436
>gi|288561097|ref|YP_003424583.1| transporter MotA/TolQ/ExbB proton channel family
[Methanobrevibacter ruminantium M1]
gi|288543807|gb|ADC47691.1| transporter MotA/TolQ/ExbB proton channel family
[Methanobrevibacter ruminantium M1]
Length = 279
Score = 49.1 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ +G E+E M++ + L + A+ + E P +G++G +LGI NL
Sbjct: 91 LKIGYKNKTEVEESMEQIFIVELSKMTNGISALKTIIELAPFLGLIGTVLGIWMTFKNLG 150
Query: 193 QSP--KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+P + I ++L T+ G+ ++ + PL + IK + +
Sbjct: 151 VNPDAAAMAEGIYIALITTIAGLTVA-IILMPLYTYIKGLIDDEMDKIEL 199
>gi|264678957|ref|YP_003278864.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|299530081|ref|ZP_07043508.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|262209470|gb|ACY33568.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|298722061|gb|EFI62991.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 210
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----- 191
+ E+ + M+ ++ K A++ + + P +G++G ++G+I+ G+
Sbjct: 86 ESSEEELRSAMEGAGRAAAHKLEKYLSALATIASAAPLLGLLGTVIGMIEIFGSQPGASS 145
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILS 216
+ +P L I ++L T G++++
Sbjct: 146 GAGNPAQLAHGISIALYNTAFGLMVA 171
>gi|71083299|ref|YP_266018.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062412|gb|AAZ21415.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1062]
Length = 224
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR--- 139
+ L + S E + + S+P +EN F D M+ ++ ++
Sbjct: 53 FRLFKKINLESEEFEEKFWKSKSAESFYNSLPADVENPTALLF-KDTMQSLLKAKSKTNL 111
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+ I ++++ I+ + + K + ++ +G + P IG+ G + GI+ + ++ + S
Sbjct: 112 NERIASILEVNIEKQISKIDKGFTFLATVGSTAPFIGLFGTVWGIMNSFQSIAISRNTSL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
I+ I +L T LG++ +
Sbjct: 172 AIVAPGIAEALFATALGLLAA 192
>gi|330720938|gb|EGG99112.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC2047]
Length = 465
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIV-GNARSYEIENLMDEEIDIILYE---KLKPY 162
S++ + L++ + + R++++ + +E L + + IL E K
Sbjct: 309 SSVRRKVEKQLQSPQQASADNPLGRVLLMYQEHIALPVEALELKLHEAILREIPPLEKWV 368
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYS 218
+ I P +G++G + G+I L+ PK + I +L T LG+ ++
Sbjct: 369 NVIKLSAMVAPLLGLLGTVSGMILTFQALTIFGAGDPKAMAGGISSALVTTALGLCVAIP 428
Query: 219 LCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
L + + S ++ +IA
Sbjct: 429 AIF-LHALVSSRSKNIVQVLEEQAAGVIAEQA 459
>gi|326402865|ref|YP_004282946.1| putative proton channel MotA/TolQ/ExbB [Acidiphilium multivorum
AIU301]
gi|325049726|dbj|BAJ80064.1| putative proton channel MotA/TolQ/ExbB [Acidiphilium multivorum
AIU301]
Length = 223
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ + E++N ++EEI + + + P +G+ G I+G+I+A LS
Sbjct: 81 LASRGENADELDNHLEEEIMDAMPRITRGLWILDTAVTIAPLLGLFGTIIGMIQAFDVLS 140
Query: 193 QS--PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ P + I +L T G++++ + L + + + ++K LI ++
Sbjct: 141 SNGGPAKVTGGIADALVSTGAGLLIA-IIAVYLVNYFNNLSRQIVLQLELIKVVLINRLH 199
Query: 251 G 251
G
Sbjct: 200 G 200
>gi|296445264|ref|ZP_06887223.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296257219|gb|EFH04287.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 626
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/152 (12%), Positives = 53/152 (34%), Gaps = 5/152 (3%)
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
+D D+ L + ++ E+ + S ++ + + F
Sbjct: 425 KSFRDMATDLTSLDHGDAEDIASIGGRVGESEAEMMRVSALYRIY-HIGASEISHRFAAA 483
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
R + A I +D + + + ++ P +G++G ++G++
Sbjct: 484 GGRPTALSGASIAAIRAALDSGVVKETQQLNRMMVVLTIAISGGPFLGLLGTVVGVMITF 543
Query: 189 GNLSQSPKI----LGTAIGVSLTGTLLGIILS 216
++ S + + I +L T+ G+ ++
Sbjct: 544 AAIAASGDVNVNAIAPGIAAALVATVAGLAVA 575
>gi|23009906|ref|ZP_00050781.1| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 124
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 9/111 (8%)
Query: 18 FYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKD-SGVSLLEIFGYKALGQDTYC 76
GGN ++++ G + ++ P I + L F +A+
Sbjct: 20 IMIDGGNFAAYFDKHAVIVIFGGSVMATIIRFPFSTIAHGVPMGLRYAFTMRAVKPH--- 76
Query: 77 DVLKLLYILMYNLKKGSRNETEN-HIDDPYNSTIFTSIPTVLENNELTTFI 126
D+++ + + ++K EN I DP+ + + FI
Sbjct: 77 DLIEEITKIADVVRKSGPIALENMEISDPF----LAQGARYIADGYDRDFI 123
>gi|326317449|ref|YP_004235121.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374285|gb|ADX46554.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 208
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+ ++ M+ I K +A++ + + P +G++G ++G+I+ G+
Sbjct: 86 QSSEADVRAAMEGTGRAIAQRLEKYLNALATIASAAPLLGLLGTVIGMIEIFGSQGSSAT 145
Query: 193 --QSPKILGTAIGVSLTGTLLGIILS 216
+P L I ++L T G+I++
Sbjct: 146 GQGNPAQLAHGISIALYNTAFGLIVA 171
>gi|148260193|ref|YP_001234320.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|146401874|gb|ABQ30401.1| outer membrane transport energization protein ExbB [Acidiphilium
cryptum JF-5]
Length = 223
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ + E++N ++EEI + + + P +G+ G I+G+I+A LS
Sbjct: 81 LASRGENADELDNHLEEEIMDAMPRITRGLWILDTAVTIAPLLGLFGTIIGMIQAFDVLS 140
Query: 193 QS--PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ P + I +L T G++++ + L + + + ++K LI ++
Sbjct: 141 SNGGPAKVTGGIADALVSTGAGLLIA-IIAVYLVNYFNNLSRRIVLQLELIKVVLINRLH 199
Query: 251 G 251
G
Sbjct: 200 G 200
>gi|221066470|ref|ZP_03542575.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|220711493|gb|EED66861.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
Length = 210
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----- 191
+ E+ + M+ ++ K A++ + + P +G++G ++G+I+ G+
Sbjct: 86 ESSEEELRSAMEGAGRAAAHKLEKYLSALATIASAAPLLGLLGTVIGMIEIFGSQPGASS 145
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILS 216
+ +P L I ++L T G++++
Sbjct: 146 GAGNPAQLAHGISIALYNTAFGLMVA 171
>gi|299770162|ref|YP_003732188.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
gi|298700250|gb|ADI90815.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
Length = 244
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+R +E + +++ + K ++ +G + P IG+ G + GII A+ + +
Sbjct: 95 SRQDLLERHLSKQVLTERRQLEKGSALLASIGNNAPFIGLFGTVFGIIHALQAIAHSGNA 154
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
S ++ IG +L T +GI ++
Sbjct: 155 SMDVVAGPIGEALVATGIGIAVA 177
>gi|116620404|ref|YP_822560.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
gi|116223566|gb|ABJ82275.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
Length = 244
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 17/189 (8%)
Query: 43 GGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNET----- 97
G V +P + K G + + V+ + +K SR
Sbjct: 16 GSTVSWDPASLWKQMGPLAKAVVVGLFIMSAYSIGVMIDRLMAYSAARKQSRQFAPAVAG 75
Query: 98 ---ENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN---LMDEEI 151
E +D+ I + + ++ I EIE ++
Sbjct: 76 ALREGKLDEAVK--IADRYKKSHLAKVVVAGLQEFQAHQISSEIPGEEIEASKRALERAE 133
Query: 152 DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLT 207
I+ E + ++ +G + P +G+ G ++GII A +S + I +L
Sbjct: 134 AIVHAELKRGVSGLATIGSTAPFVGLFGTVVGIINAFKGISNEKSTGLGAVAGGISEALV 193
Query: 208 GTLLGIILS 216
T +G+ ++
Sbjct: 194 TTAIGLFVA 202
>gi|325122240|gb|ADY81763.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
calcoaceticus PHEA-2]
Length = 244
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+R +E + +++ + K ++ +G + P IG+ G + GII A+ + +
Sbjct: 95 SRQDLLERHLSKQVLTERRQLEKGSALLASIGNNAPFIGLFGTVFGIIHALQAIAHSGNA 154
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
S ++ IG +L T +GI ++
Sbjct: 155 SMDVVAGPIGEALVATGIGIAVA 177
>gi|59713376|ref|YP_206151.1| TolQ protein [Vibrio fischeri ES114]
gi|59481624|gb|AAW87263.1| TolQ protein [Vibrio fischeri ES114]
Length = 451
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 109 IFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAI 165
I I L+ + + + + +E L ++ I+ E+ K +
Sbjct: 291 IRQQIRKQLKQPQELGQNPLGRVLAVYDAEKQRSVEALELRLLETIVDEQQGLEKGLSML 350
Query: 166 SHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ P +G++G + G+I+ + + PK++ I ++L T+LG++ + L
Sbjct: 351 KLLAALAPMLGLLGTVTGMIETFQVITLFGNGDPKVMAGGISMALVTTVLGLVAAMPLLL 410
>gi|218676444|ref|YP_002395263.1| Tol R/Q protein [Vibrio splendidus LGP32]
gi|218324712|emb|CAV26340.1| Tol R/Q protein [Vibrio splendidus LGP32]
Length = 458
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N +E + E + K + + P +G++G + G+I+ ++Q
Sbjct: 325 NQTVEALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGN 384
Query: 194 -SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
PK++ I ++L T+LG++ + L + + + + L+A
Sbjct: 385 GDPKVMAGGISMALVTTVLGLVAAMPLLL-AHNILSTQSENIRNILEKQGIGLVAEQA 441
>gi|209964129|ref|YP_002297044.1| MotA [Rhodospirillum centenum SW]
gi|209957595|gb|ACI98231.1| MotA [Rhodospirillum centenum SW]
Length = 463
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 9/125 (7%)
Query: 131 RMIIVGNARSY-EIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ V + + ++E L + + IL E + I P +G++G + G+IK
Sbjct: 327 RVLAVYDENQHADVETLELKLDEAILKEIPKLERGISTIKVFAAIAPLLGLLGTVTGMIK 386
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
+ + PK++ I +L T+LG++++ + L S +
Sbjct: 387 TFQAITLFGTGDPKLMAGGISEALVTTVLGLVVAIPMVL-LYSLCAGRAKSVIEVLEEQS 445
Query: 243 KALIA 247
LIA
Sbjct: 446 AGLIA 450
>gi|156977963|ref|YP_001448869.1| hypothetical protein VIBHAR_06759 [Vibrio harveyi ATCC BAA-1116]
gi|156529557|gb|ABU74642.1| hypothetical protein VIBHAR_06759 [Vibrio harveyi ATCC BAA-1116]
Length = 455
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E + E + K + + P +G++G + G+I+ ++Q PK
Sbjct: 324 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ I ++L T+LG++ + L + + S + L+A
Sbjct: 384 VMAGGISMALVTTVLGLVAAMPLLL-AHNVLSSQAENIRNILEKQGIGLVAEQA 436
>gi|86146650|ref|ZP_01064971.1| TolQ protein [Vibrio sp. MED222]
gi|85835497|gb|EAQ53634.1| TolQ protein [Vibrio sp. MED222]
Length = 458
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N +E + E + K + + P +G++G + G+I+ ++Q
Sbjct: 325 NQTVEALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGN 384
Query: 194 -SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
PK++ I ++L T+LG++ + L + + + + L+A
Sbjct: 385 GDPKVMAGGISMALVTTVLGLVAAMPLLL-AHNILSTQSENIRNILEKQGIGLVAEQA 441
>gi|302189331|ref|ZP_07266004.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
Length = 230
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++I ++ +G + P IG+ G + GII A+ +SQ S ++
Sbjct: 98 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALTAISQAKSASIAVV 157
Query: 199 GTAIGVSLTGTLLGI------ILSYSLCN 221
IG +L T +GI +L+Y+
Sbjct: 158 AGPIGEALVATGVGIAVAVPAVLAYNFFG 186
>gi|254784601|ref|YP_003072029.1| transporter proton channel domain containing protein
[Teredinibacter turnerae T7901]
gi|237684010|gb|ACR11274.1| transporter, proton channel domain containing protein
[Teredinibacter turnerae T7901]
Length = 458
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 5/115 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
A + +E ++E L + + + P +G++G + G+I ++
Sbjct: 339 GADTETLELKLEEATLKELPRIESGLNLLKIISMVAPLLGLLGTVTGMIVTFQAITIYGA 398
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
PK + I +L T+LG+ ++ L + + + + LIA
Sbjct: 399 GDPKAMAGGISGALVTTVLGLCVAIPTVL-LHTFLNGKAKRIVHVLEEESAGLIA 452
>gi|312881678|ref|ZP_07741456.1| MotA/TolQ/ExbB proton channel family protein [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370741|gb|EFP98215.1| MotA/TolQ/ExbB proton channel family protein [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 450
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E + E + E K + P +G++G + G+I+ ++Q PK
Sbjct: 324 EALELRLLEAVVDEQSELEKGLSMLKLFAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCN 221
I+ I ++L T+LG+I + L
Sbjct: 384 IMADGISMALVTTVLGLITAMPLLL 408
>gi|73540301|ref|YP_294821.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
gi|72117714|gb|AAZ59977.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
Length = 231
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---SPKILGT 200
+ +++E + +E + +A+ + P +G++G ++G+I+ G+ +P+ L
Sbjct: 118 KEVVEEAGRAVAHELERYLNALGTIASVAPLMGLLGTVIGMIEIFGSQGGTGANPEQLAH 177
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T G+I++
Sbjct: 178 GISVALYNTAFGLIVA 193
>gi|84499344|ref|ZP_00997632.1| biopolymer transport exbB protein [Oceanicola batsensis HTCC2597]
gi|84392488|gb|EAQ04699.1| biopolymer transport exbB protein [Oceanicola batsensis HTCC2597]
Length = 216
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 48/127 (37%), Gaps = 12/127 (9%)
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
Y+R ++ ++ E + + + + + P +G+ G +LG+I A
Sbjct: 77 YLRPVVAMALDGQSDAPRLEAEAEARFARLESGFRLLDSVAQLAPLLGLFGTVLGMISAF 136
Query: 189 GNLSQ-----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI---KSTRLKQHRLYII 240
+ + P +L I V+L T +G+ ++ P + ++ L
Sbjct: 137 QAMQEAGSQVDPSVLAGGIWVALLTTAVGLAVA----MPTALVLSWFEARMDADRVLAQT 192
Query: 241 VKKALIA 247
+ ++A
Sbjct: 193 ALRTILA 199
>gi|55247873|gb|AAV48774.1| TolR [Listonella anguillarum 775]
Length = 444
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N +E + E + K + + P +G++G + G+I+ ++Q
Sbjct: 316 NRSVEALELRLLEAVVDEQAHLEKGLSMLKLLAAIAPMLGLLGTVTGMIETFQVITQFGN 375
Query: 194 -SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
PK++ I ++L T+LG++ + L + + S + L+A
Sbjct: 376 GDPKVMAGGISMALVTTVLGLVSAIPLLL-AHNILSSQAENIRSILEKQGIGLVAAQA 432
>gi|254283894|ref|ZP_04958862.1| TonB system biopolymer transport component [gamma proteobacterium
NOR51-B]
gi|219680097|gb|EED36446.1| TonB system biopolymer transport component [gamma proteobacterium
NOR51-B]
Length = 461
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----Q 193
+E M E + + + + P +G++G + G+I ++
Sbjct: 340 MDPETLELKMAEGVLKETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIITFQAITIFGAG 399
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
PK + I +L T+LG++++
Sbjct: 400 DPKAMAGGISGALVTTVLGLLVA 422
>gi|258624585|ref|ZP_05719523.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM603]
gi|258583132|gb|EEW07943.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM603]
Length = 458
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N + + + + +E L ++ ++ E+
Sbjct: 293 TLRQKIKAQLKNPDQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 352
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 353 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 412
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 413 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 441
>gi|78063451|ref|YP_373359.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77971336|gb|ABB12715.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 238
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+E + ++I + ++ +G + P +G+ G + GII A+ + S S ++
Sbjct: 100 LERHLRQQIHNARRREEAGLAVLASIGSTAPFVGLFGTVFGIIHALTAITHSASASIDVV 159
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T +GI ++
Sbjct: 160 AGPIGEALVATGIGIAVA 177
>gi|15641555|ref|NP_231187.1| biopolymer transport protein ExbB-related protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121587218|ref|ZP_01676992.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
2740-80]
gi|121726921|ref|ZP_01680122.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V52]
gi|153818886|ref|ZP_01971553.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae NCTC
8457]
gi|153823108|ref|ZP_01975775.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|227081702|ref|YP_002810253.1| biopolymer transport protein [Vibrio cholerae M66-2]
gi|229508506|ref|ZP_04398009.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229511424|ref|ZP_04400903.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229518563|ref|ZP_04408006.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229607912|ref|YP_002878560.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
gi|254848668|ref|ZP_05238018.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MO10]
gi|255745016|ref|ZP_05418966.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262161698|ref|ZP_06030716.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae INDRE
91/1]
gi|298498366|ref|ZP_07008173.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MAK
757]
gi|9656053|gb|AAF94701.1| biopolymer transport protein ExbB-related protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121548561|gb|EAX58615.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
2740-80]
gi|121630683|gb|EAX63070.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V52]
gi|126510556|gb|EAZ73150.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae NCTC
8457]
gi|126519363|gb|EAZ76586.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|227009590|gb|ACP05802.1| biopolymer transport protein [Vibrio cholerae M66-2]
gi|229343252|gb|EEO08227.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229351389|gb|EEO16330.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229354460|gb|EEO19383.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229370567|gb|ACQ60990.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
gi|254844373|gb|EET22787.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MO10]
gi|255737487|gb|EET92882.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262028430|gb|EEY47085.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae INDRE
91/1]
gi|297542699|gb|EFH78749.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MAK
757]
Length = 457
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|50084695|ref|YP_046205.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
gi|49530671|emb|CAG68383.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
Length = 244
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+R +E + +++ + K ++ +G + P IG+ G + GII A+ + +
Sbjct: 95 SRQDLLERHLSKQVLTERRQLEKGSALLASIGNNAPFIGLFGTVFGIIHALQAIASSGNA 154
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
S ++ IG +L T +GI ++
Sbjct: 155 SMDVVAGPIGEALVATGIGIAVA 177
>gi|260778808|ref|ZP_05887700.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260604972|gb|EEX31267.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 452
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + G ++ +E L ++ ++ E+ K + + P +G++G + G+I+
Sbjct: 313 LSVYGKEKNLSVEALELRLLETVVDEQATLEKGLSMLKLLAALAPMLGLLGTVTGMIETF 372
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ I ++L T+LG++ + L L I S++ + R I+ K+
Sbjct: 373 QVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLL--LAHNILSSQAETIRN-ILEKQG 429
Query: 245 L 245
+
Sbjct: 430 I 430
>gi|213969265|ref|ZP_03397403.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|301381769|ref|ZP_07230187.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302061031|ref|ZP_07252572.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|302133871|ref|ZP_07259861.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213925943|gb|EEB59500.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|330877592|gb|EGH11741.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 230
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++I ++ +G + P IG+ G + GII A+ +SQ S ++
Sbjct: 98 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALTAISQAKSASIAVV 157
Query: 199 GTAIGVSLTGTLLGI------ILSYSLCN 221
IG +L T +GI +L+Y+
Sbjct: 158 AGPIGEALVATGVGIAVAVPAVLAYNFFG 186
>gi|119470957|ref|ZP_01613541.1| putative Tol protein [Alteromonadales bacterium TW-7]
gi|119445979|gb|EAW27259.1| putative Tol protein [Alteromonadales bacterium TW-7]
Length = 455
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 131 RMIIVGNARSYEIENLMDEEI-DIILYEKLKPYHAIS---HMGESLPAIGIVGAILGIIK 186
R++ V + + + ++ ++ + IL E K ++ + P +G++G + G+I
Sbjct: 325 RVMKVKDDYPHVAYDTLELKLSEAILREMPKITRNLTLIKIISVVAPLLGLLGTVTGMIN 384
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ PK++ I +L T+LG++++ + + + + +
Sbjct: 385 TFQAITLFGTGDPKLMAGGISQALVTTVLGLVVAIPTVF-IYTLLNTRSKGLLLILQEQS 443
Query: 243 KALIA 247
+IA
Sbjct: 444 AGIIA 448
>gi|95930818|ref|ZP_01313550.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95133166|gb|EAT14833.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 470
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
I + +E+++ E I L + ++ M P +G++G + G+I ++
Sbjct: 346 ISARHEEREILESILQEAILKELPRLERALPLLNIMAAIAPLLGLLGTVTGMISTFEIIN 405
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCN 221
P+++ I V+L T+LG++++ +
Sbjct: 406 IYGTGDPRMMSGGISVALVTTMLGLVVAIPIML 438
>gi|329895889|ref|ZP_08271217.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
gi|328922107|gb|EGG29466.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
Length = 474
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+E M E + + + + P +G++G + G+I ++
Sbjct: 353 TMDPETLELKMAEGVMRETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIITFQAITIFGA 412
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
PK + I +L T+LG++++
Sbjct: 413 GDPKAMAGGISSALVTTVLGLLVA 436
>gi|262165742|ref|ZP_06033479.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
gi|262025458|gb|EEY44126.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
Length = 458
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N + + + + +E L ++ ++ E+
Sbjct: 293 TLRQKIKAQLKNPDQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 352
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 353 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 412
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 413 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 441
>gi|28867901|ref|NP_790520.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851137|gb|AAO54215.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|331018208|gb|EGH98264.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 230
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++I ++ +G + P IG+ G + GII A+ +SQ S ++
Sbjct: 98 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALTAISQAKSASIAVV 157
Query: 199 GTAIGVSLTGTLLGI------ILSYSLCN 221
IG +L T +GI +L+Y+
Sbjct: 158 AGPIGEALVATGVGIAVAVPAVLAYNFFG 186
>gi|68304967|gb|AAY89978.1| predicted biopolymer transport ExbB-like transmembrane protein
RSc2528 RS01053 [uncultured bacterium BAC13K9BAC]
Length = 208
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 86/229 (37%), Gaps = 33/229 (14%)
Query: 32 FEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKK 91
F ++V G + ++ + V+ L +F D K + + + N K+
Sbjct: 3 FASLLVKGGPVVYILLGLSVYVLSIVIYKLHILFKVNFFNSDV---THKSVKMWLNNNKE 59
Query: 92 GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEI 151
+ + ++ + + ++ N + + E + EE+
Sbjct: 60 EA-------------------YTDISKDTHPQKEVVSFTMYHLLKNNINQDKERYLREEV 100
Query: 152 DIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAI 202
+ E+L+ Y + + + P +G++G + G+I A + + +P L I
Sbjct: 101 SRLSQERLEYYDSNLDTLKVIAMVAPLLGLLGTVFGMIDAFQQMEMAGNNINPSTLSGGI 160
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLK-QHRLYIIVKKALIAYMN 250
+L T +G+ ++ S ++T K + + V K L A+MN
Sbjct: 161 WEALLTTAVGLSVAIPTVL-FESYFRATNEKLKINIEHSVTKLLTAHMN 208
>gi|229523634|ref|ZP_04413039.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
gi|229337215|gb|EEO02232.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
Length = 457
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|110633791|ref|YP_673999.1| MotA/TolQ/ExbB proton channel [Mesorhizobium sp. BNC1]
gi|110284775|gb|ABG62834.1| outer membrane transport energization protein ExbB [Chelativorans
sp. BNC1]
Length = 232
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
MR+ + N IE+ + L++ + + A+ + + P +G+ G +LG+I+A
Sbjct: 86 MRLAAMRNVPKDAIEDEVARIALSRLHDLQRGFRALDAIAQISPLLGLFGTVLGMIEAFR 145
Query: 190 NLSQ-----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
L P +L I V+L T G+ ++ + L + ++ + + A
Sbjct: 146 QLQNAGNAVDPSMLAGGIWVALLTTAAGLAVAMPVSL-LLTWFETRVENERVAIETMTSA 204
Query: 245 LIAY 248
++++
Sbjct: 205 VLSH 208
>gi|297182746|gb|ADI18901.1| biopolymer transport proteins [uncultured delta proteobacterium
HF0010_08B07]
Length = 242
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KIL 198
+E +M + + + +G + P IG+ G ++GII A L ++P +++
Sbjct: 95 VEQIMLSTLARERQRYNRYLNYFGTIGNNTPFIGLFGTVIGIILAFKKLGENPKGGLEVI 154
Query: 199 GTAIGVSLTGTLLGIILSYS---LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
G I +L T +G+ ++ + N S +K L IV L
Sbjct: 155 GPLISEALVATAVGLFVAIPAVVIFNWFKSMVKERISNTDFLMRIVLAHL 204
>gi|153829989|ref|ZP_01982656.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
623-39]
gi|148874525|gb|EDL72660.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
623-39]
Length = 457
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|90022457|ref|YP_528284.1| biopolymer transport proteins-like protein [Saccharophagus
degradans 2-40]
gi|89952057|gb|ABD82072.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 464
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS--- 192
+ E ++L+ ++ K AI+ P +G++G + G+I+ ++
Sbjct: 313 NTKSARERDDLLFMQLQQDKTTLEKRIGAIAITAAVAPLLGLLGTVSGMIETFKMMTLFG 372
Query: 193 -QSPKILGTAIGVSLTGTLLGIILS 216
P+++ I +L T LG++++
Sbjct: 373 AGDPEVVSGGIAQALVTTELGLVVA 397
>gi|147673075|ref|YP_001217099.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae O395]
gi|262169575|ref|ZP_06037266.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
gi|3811311|gb|AAC69453.1| exbB-related protein [Vibrio cholerae]
gi|146314958|gb|ABQ19497.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae O395]
gi|227013459|gb|ACP09669.1| biopolymer transport protein [Vibrio cholerae O395]
gi|262021809|gb|EEY40519.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
Length = 457
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|229520580|ref|ZP_04410004.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
gi|229342404|gb|EEO07398.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
Length = 457
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|330964940|gb|EGH65200.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 230
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++I ++ +G + P IG+ G + GII A+ +SQ S ++
Sbjct: 98 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALTAISQAKSASIAVV 157
Query: 199 GTAIGVSLTGTLLGI------ILSYSLCN 221
IG +L T +GI +L+Y+
Sbjct: 158 AGPIGDALVATGVGIAVAVPAVLAYNFFG 186
>gi|262171435|ref|ZP_06039113.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
gi|261892511|gb|EEY38497.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
Length = 458
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N + + + + +E L ++ ++ E+
Sbjct: 293 TLRQKIKAQLKNPDQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 352
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 353 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 412
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 413 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 441
>gi|88706386|ref|ZP_01104091.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
gi|88699322|gb|EAQ96436.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
Length = 474
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARS-YEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ V ++E L + + ++ E + + P +G++G + G+I
Sbjct: 343 RVLKVHEDNPSMDLETLELKMSEAVMRETPKLESGLTLLKIIAAVAPLMGLLGTVTGMII 402
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ PK + I +L T+LG++++
Sbjct: 403 TFQAITIFGAGDPKAMAGGISGALITTVLGLLVA 436
>gi|71279554|ref|YP_270422.1| MotA/TolQ/ExbB proton channel family protein [Colwellia
psychrerythraea 34H]
gi|71145294|gb|AAZ25767.1| MotA/TolQ/ExbB proton channel family [Colwellia psychrerythraea
34H]
Length = 449
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 96 ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA-RSYEIENLMDEEIDII 154
E I S+ S L+ + +++ + + +E +DE I
Sbjct: 286 ALERLIVLGGMSSKIKSQEKNLDKPNENNPLGRLLKVFYDNQSVDAETLELKLDEAILRE 345
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTL 210
+ + + I P +G++G ++G+I + + PKI+ I ++L T
Sbjct: 346 TPKVDRGINLIKMFAAIAPLMGLLGTVIGMIMTFQTITLFGTGDPKIMAGNISLALVTTA 405
Query: 211 LGIILSYSLCN 221
LG+I + L
Sbjct: 406 LGLICALPLIL 416
>gi|258405774|ref|YP_003198516.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257798001|gb|ACV68938.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 480
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 54/170 (31%), Gaps = 4/170 (2%)
Query: 56 DSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT 115
+ + +F + L +L L L I D +
Sbjct: 270 RTWIRRGGVFIWPLLAVAGVALLLALERGLALLRLGSPPPALIREIADLASRGSLNEAIR 329
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
+ + R++ A IE+ E I ++ + + + P +
Sbjct: 330 LCQKQRGKPACLVLGRILERAPAPRQAIEDAQHEAILNLMPRLERFLPTLQVLAAIAPLL 389
Query: 176 GIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
G++G + G+I + + P+++ I +L T G+ ++ L
Sbjct: 390 GLLGTVTGMIGTFQTITIFGTGKPEMMAGGISEALLTTQFGLAIAIPLLL 439
>gi|120611235|ref|YP_970913.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120589699|gb|ABM33139.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
Length = 208
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+ ++ M+ + K +A++ + + P +G++G ++G+I+ G+
Sbjct: 86 QSSEADVRAAMEGTGRAVAQRLEKYLNALATIASAAPLLGLLGTVIGMIEIFGSQGSSAT 145
Query: 193 --QSPKILGTAIGVSLTGTLLGIILS 216
+P L I ++L T G+I++
Sbjct: 146 GQGNPAQLAHGISIALYNTAFGLIVA 171
>gi|254286393|ref|ZP_04961351.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
AM-19226]
gi|150423560|gb|EDN15503.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
AM-19226]
Length = 457
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|84516787|ref|ZP_01004145.1| MotA/TolQ/ExbB proton channel family protein [Loktanella
vestfoldensis SKA53]
gi|84509255|gb|EAQ05714.1| MotA/TolQ/ExbB proton channel family protein [Loktanella
vestfoldensis SKA53]
Length = 207
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----- 193
++ + + + + L + + + ++ P +G+ G +LG+I A +
Sbjct: 89 QARDARDRLYTLAEARLARLEAGFRLLDGVAQTAPLLGLFGTVLGMIAAFRAMQDAGQSV 148
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
P +L I V+L T G+ ++ L + S ++ + R+ + + +
Sbjct: 149 DPSVLAGGIWVALMTTAAGLAVAMPLSA-ILSWLEGRMAHERRMAEALIEGAL 200
>gi|261253062|ref|ZP_05945635.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
gi|260936453|gb|EEX92442.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
Length = 451
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 52/126 (41%), Gaps = 8/126 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + + +E L ++ ++ E+ K + + P +G++G + G+I+
Sbjct: 312 LAVYSKEKKQSVEALELRLLEAVVDEQTGLEKGLSMLKLLAALAPMLGLLGTVTGMIETF 371
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ I ++L T+LG+I + L + + S +
Sbjct: 372 QVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLLL-AHNILSSQAESIRHILEKQGIG 430
Query: 245 LIAYMN 250
L+A
Sbjct: 431 LVAEQA 436
>gi|315180093|gb|ADT87007.1| biopolymer transport protein ExbB-related protein [Vibrio furnissii
NCTC 11218]
Length = 455
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + ++ +E L ++ ++ E+ K + + P +G++G + G+I+
Sbjct: 314 LSVYNKEQNRSVEALELRLLEAVVDEQTGLEKGLSMLKLLAALAPMLGLLGTVTGMIETF 373
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ I ++L T+LG++ + L L I ST+ + R I+ K+
Sbjct: 374 QVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLL--LAHNILSTQAENIRN-ILEKQG 430
Query: 245 L 245
+
Sbjct: 431 I 431
>gi|229529414|ref|ZP_04418804.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
gi|229333188|gb|EEN98674.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
Length = 457
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|254515774|ref|ZP_05127834.1| TonB system biopolymer transport component [gamma proteobacterium
NOR5-3]
gi|219675496|gb|EED31862.1| TonB system biopolymer transport component [gamma proteobacterium
NOR5-3]
Length = 474
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 9/125 (7%)
Query: 131 RMIIVGNARS-YEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ V ++E L + + ++ E + + P +G++G + G+I
Sbjct: 343 RVLKVHEDNPSMDLETLELKMSEAVMRETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIV 402
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ PK + I +L T+LG++++ L + + + +
Sbjct: 403 TFQAITIFGAGDPKAMAGGISGALITTVLGLLVAIPTVL-LHTLVNGRAQRIIHVLTEQA 461
Query: 243 KALIA 247
++A
Sbjct: 462 TGIVA 466
>gi|119503466|ref|ZP_01625549.1| TonB system biopolymer transport component [marine gamma
proteobacterium HTCC2080]
gi|119460528|gb|EAW41620.1| TonB system biopolymer transport component [marine gamma
proteobacterium HTCC2080]
Length = 473
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+ +E M E + + + + P +G++G + G+I ++
Sbjct: 351 DMDPETLELKMAEGVLRETPKLEAGLTLLKIIAAVAPLMGLLGTVTGMIITFQAITIFGA 410
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
PK + I +L T+LG++++
Sbjct: 411 GDPKAMAGGISSALVTTVLGLLVA 434
>gi|229514950|ref|ZP_04404410.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
gi|229347655|gb|EEO12614.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
Length = 457
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|297579115|ref|ZP_06941043.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
RC385]
gi|297536709|gb|EFH75542.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
RC385]
Length = 457
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAETIRNILEKQGIGLVAQQA 440
>gi|254225265|ref|ZP_04918877.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V51]
gi|125622106|gb|EAZ50428.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V51]
Length = 457
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|254473807|ref|ZP_05087202.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
gi|211957193|gb|EEA92398.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
Length = 244
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 57/166 (34%), Gaps = 6/166 (3%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT-TFICDYMRMIIVGNARSYE 142
+ G + E + + V+ + + MR ++ +
Sbjct: 47 WQFWVAGVGRHRKAEQAVAFWRVGKRDQAYKIVVTDRSPVSDVLAHAMRGLMKPQVPEEK 106
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKI 197
+ ++ L + A+ + + P +G+ G +LG+I A ++ P
Sbjct: 107 VREDVERVCFTHLGDLRSYLRALDMIAQIAPLLGLFGTVLGMIGAFQAMADAGSQVDPST 166
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
L I V+L T +G+ ++ L+ +Q + IV +
Sbjct: 167 LAGGIWVALLTTAVGLAVAIPASVMLSLFEGRIEREQGAMEKIVTE 212
>gi|260768382|ref|ZP_05877316.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
gi|260616412|gb|EEX41597.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
Length = 455
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + ++ +E L ++ ++ E+ K + + P +G++G + G+I+
Sbjct: 314 LSVYNKEQNRSVEALELRLLEAVVDEQTGLEKGLSMLKLLAALAPMLGLLGTVTGMIETF 373
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++Q PK++ I ++L T+LG++ + L L I ST+ + R I+ K+
Sbjct: 374 QVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLL--LAHNILSTQAENIRN-ILEKQG 430
Query: 245 L 245
+
Sbjct: 431 I 431
>gi|94309482|ref|YP_582692.1| MotA/TolQ/ExbB proton channel [Cupriavidus metallidurans CH34]
gi|93353334|gb|ABF07423.1| biopolymer transport channel protein [Cupriavidus metallidurans
CH34]
Length = 206
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---SPKILGT 200
+++++E ++ +E + +A+ + P +G++G ++G+I+ GN +P+ L
Sbjct: 93 KDVVEEAGRVVAHELERYLNALGTIASVAPLMGLLGTVIGMIEIFGNQGGTGANPEQLAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T G+I++
Sbjct: 153 GISVALYNTAFGLIVA 168
>gi|330960511|gb|EGH60771.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 228
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ +R +E + ++I ++ +G + P IG+ G + GII A+ +
Sbjct: 89 VDSWSRQELLERSLHQQIHCERRSLESGMIVLASIGSTAPFIGLFGTVFGIIHALQAIST 148
Query: 192 --SQSPKILGTAIGVSLTGTLLGI------ILSYSLCN 221
S S ++ IG +L T +GI +L+Y+ C
Sbjct: 149 AKSASIAVVAGPIGEALIATGIGIAVAVPAVLAYNFCG 186
>gi|194288710|ref|YP_002004617.1| biopolymer transport transmembrane protein [Cupriavidus taiwanensis
LMG 19424]
gi|193222545|emb|CAQ68548.1| BIOPOLYMER TRANSPORT TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis
LMG 19424]
Length = 206
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---SPKILGT 200
+++++E ++ +E + +A+ + P +G++G ++G+I+ GN SP+ L
Sbjct: 93 KDVVEEAGRVVAHELERYLNALGTIASVAPLMGLLGTVIGMIEIFGNQGGTGTSPEQLAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T G+I++
Sbjct: 153 GISVALYNTAFGLIVA 168
>gi|153802650|ref|ZP_01957236.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-3]
gi|124121823|gb|EAY40566.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-3]
Length = 457
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|328543882|ref|YP_004303991.1| MotA/TolQ/ExbB proton channel [polymorphum gilvum SL003B-26A1]
gi|326413626|gb|ADZ70689.1| MotA/TolQ/ExbB proton channel [Polymorphum gilvum SL003B-26A1]
Length = 239
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 19/163 (11%)
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD 148
+ G R E I+ P ++ + MR+ +VG+ +IE+ +
Sbjct: 60 WRAGRRREALGSIEAPVSAA--------------EEAVATAMRLRLVGSVSRSDIEDEIG 105
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIG 203
I L+ A+ +G+ P +G+ G +LG+I A L S P L I
Sbjct: 106 RLAVIRLHSLQGGLKALDAIGQLAPLLGLFGTVLGMIAAFQELQSAGNSVDPSALAGGIW 165
Query: 204 VSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
V+L T G+ ++ + LT ++ + + + L+
Sbjct: 166 VALLTTAAGLAVAMPVSIVLTFFESRIECERVAIETLAAEVLV 208
>gi|91762271|ref|ZP_01264236.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718073|gb|EAS84723.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1002]
Length = 224
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR--- 139
+ L + S E + + S+P +EN F D M+ ++ ++
Sbjct: 53 FRLFKKINLESEEFEEKFWKSKSAESFYNSLPADVENPTALLF-KDTMQSLLKAKSKTNL 111
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+ + ++++ I+ + + K + ++ +G + P IG+ G + GI+ + ++ + S
Sbjct: 112 NERMASILEVNIEKQISKIDKGFTFLATVGSTAPFIGLFGTVWGIMNSFQSIAISRNTSL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
I+ I +L T LG++ +
Sbjct: 172 AIVAPGIAEALFATALGLLAA 192
>gi|323492747|ref|ZP_08097891.1| Tol R/Q protein [Vibrio brasiliensis LMG 20546]
gi|323313122|gb|EGA66242.1| Tol R/Q protein [Vibrio brasiliensis LMG 20546]
Length = 451
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYH 163
S I L+ ++ T + + ++ +E L ++ ++ E+ K
Sbjct: 287 SVARQKIRQQLKTPQVPTNNPLGRVLSVYSKGKNQTVEALELRLLEAVVDEQASLEKGLS 346
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSL 219
+ + P +G++G + G+I+ ++Q PK++ I ++L T+LG+I + L
Sbjct: 347 MLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPL 406
Query: 220 CNPLTSQIKSTRLKQHRLYIIVKKAL 245
L I S + + R I+ K+ +
Sbjct: 407 L--LAHNILSAQAESIRN-ILEKQGI 429
>gi|254477892|ref|ZP_05091277.1| MotA/TolQ/ExbB proton channel family domain protein [Ruegeria sp.
R11]
gi|214028477|gb|EEB69313.1| MotA/TolQ/ExbB proton channel family domain protein [Ruegeria sp.
R11]
Length = 217
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 134 IVGNARSYEIE-NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++G A E E + ++ E + + + + + + P +G+ G +LG+I A L
Sbjct: 81 VMGMAVEGEAEFSRLEAEAETRFARLERGFRLLDSVAQLAPLLGLFGTVLGMITAFQALQ 140
Query: 193 Q-----SPKILGTAIGVSLTGTLLGIILS 216
+ P IL I V+L T +G+ ++
Sbjct: 141 EAGAQVDPSILAGGIWVALLTTAVGLAVA 169
>gi|258622911|ref|ZP_05717927.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM573]
gi|258584850|gb|EEW09583.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM573]
Length = 696
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 50/121 (41%), Gaps = 7/121 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+N + + + + +E L ++ ++ E+
Sbjct: 546 TLRQKIKAQLKNPDQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 605
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 606 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 665
Query: 221 N 221
Sbjct: 666 L 666
>gi|326386926|ref|ZP_08208540.1| hypothetical protein Y88_1564 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208606|gb|EGD59409.1| hypothetical protein Y88_1564 [Novosphingobium nitrogenifigens DSM
19370]
Length = 219
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 70/233 (30%), Gaps = 25/233 (10%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLY 83
+ L +P IV G L + + L + + D+
Sbjct: 2 DFAHLFEPLPAAIVVGGTLVSTALRTGRSDCLHTLQELGGLLRPRLDADRLRGDLA---- 57
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
L +++++ H P F + + I +++
Sbjct: 58 PLAHDVRQDGVYRARAH---PTGDREF--------DEAIDAMIEARTASVLMMRHAVQRK 106
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
L +S + P G+ G ++ + + + + + AI
Sbjct: 107 RRL---------ARAQLASATLSLAADLAPVFGLAGTLVSLSQ-LSGRGIARSMFMGAIS 156
Query: 204 VSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
+S+ TL G++L+ L PL ++ ++ V L + P++
Sbjct: 157 MSVMATLYGLLLANILLAPLARAVERRAEREEESRQDVVDWLASQFASVAPRL 209
>gi|121594645|ref|YP_986541.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|222110753|ref|YP_002553017.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|120606725|gb|ABM42465.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|221730197|gb|ACM33017.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 212
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 115 TVLENNELTTFICDYMRMIIVG-NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
+ +N+ L + +R + + ++ M+ + + K +A++ + + P
Sbjct: 63 QLAQNSALGEVLASGLRTLNSNPQSTEADVRAAMEGAGRAVAHRLEKYLNALATIASAAP 122
Query: 174 AIGIVGAILGIIKAMGN----------LSQSPKILGTAIGVSLTGTLLGIILS 216
+G++G ++G+I+ G+ +P L I ++L T G+I++
Sbjct: 123 LLGLLGTVIGMIEIFGSQAGTGAVGATGGGNPAQLAHGISIALYNTAFGLIVA 175
>gi|95931355|ref|ZP_01314068.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95132598|gb|EAT14284.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 480
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
+ ++EN + E I + + ++ + P +G++G + G+I + +
Sbjct: 354 DLNREDLENSLQEAILGEIPRLERFLSTLAVLASIAPLLGLLGTVTGMINTFQVITFHGT 413
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNP 222
P+++ + I +L T+LG+ ++ +
Sbjct: 414 GDPRLMSSGISEALVTTMLGLAVAIPIMLC 443
>gi|193212304|ref|YP_001998257.1| protein TolQ [Chlorobaculum parvum NCIB 8327]
gi|193085781|gb|ACF11057.1| protein TolQ [Chlorobaculum parvum NCIB 8327]
Length = 220
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 57/148 (38%), Gaps = 9/148 (6%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
++ + ++ KK S++ ++ + +F + + + F Y+ + N
Sbjct: 37 IIAWKFGMVRKSKKESQDFLDSFFELQNTDRLFATSESFRSGSLPRVFRAGYIEYSSMRN 96
Query: 138 ARS-----YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
I + E++ + ++ +G + P IG+ G + GI+ + N+
Sbjct: 97 RGDDARLKEHIRRAVKREVNTESKRLSRLVPFLATVGNTAPFIGLFGTVWGIMSSFQNIG 156
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
S S + I +L T G++ +
Sbjct: 157 LMKSASLAAVAPGISEALVATATGLVAA 184
>gi|260772794|ref|ZP_05881710.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
gi|260611933|gb|EEX37136.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
Length = 456
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 58/147 (39%), Gaps = 8/147 (5%)
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISH 167
I L+ +E + + + ++ +E L ++ ++ E+ K +
Sbjct: 293 QRIQQQLKQSEPNSNNPLGRVLSVYDKEQNRSVEALELRLLEAVVDEQAGLEKGLSMLKL 352
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
P +G++G + G+I+ ++Q PK++ I ++L T+LG++ + L
Sbjct: 353 FAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLL-A 411
Query: 224 TSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + S + L+A
Sbjct: 412 HNILSSQAETIRTILEKQGIGLVAEQA 438
>gi|254447971|ref|ZP_05061435.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262397|gb|EDY86678.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 203
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDII----LYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ VG +M E I+ +E + +A+ + P +G++G ++G+I+
Sbjct: 72 RVLAVGLINREHSREVMKETIEETGRHVAHELERFLNALGTIAAITPLMGLLGTVIGMIQ 131
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ P L I +L T GI ++
Sbjct: 132 VFAVITSSGVGDPGALAGGISQALITTAAGIGVA 165
>gi|261884115|ref|ZP_06008154.1| flagellar motor protein MotA [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 119
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 21/132 (15%)
Query: 42 LGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI 101
+ V A K +K + L F + + + +K E
Sbjct: 1 MFSAVTATNKKYVKAAFKDLKVAFKGSGVDMSKR---IAEMVEYSTLARKNGILSLEQ-- 55
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
S+I F+ + M++ G E++ ++ I+ +
Sbjct: 56 ---KASSI------------DDEFLKTGLTMLVDGQPID-EVKENLELAIETTEEYYHEC 99
Query: 162 YHAISHMGESLP 173
H GE P
Sbjct: 100 AHFWIQTGERSP 111
>gi|84490179|ref|YP_448411.1| biopolymer transport protein [Methanosphaera stadtmanae DSM 3091]
gi|84373498|gb|ABC57768.1| predicted biopolymer transport protein [Methanosphaera stadtmanae
DSM 3091]
Length = 280
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+ +G E+E+ M++ + + + +K I + E P +G++G +LG+ L
Sbjct: 92 LKIGYRSKSEVEDNMEQVFIVEMSKMMKGLSTIQTIIEMAPLLGLIGTVLGMWYTFKELG 151
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
S +L I +++ T+ G+ ++ + P + IK+ Q I K
Sbjct: 152 VSNDITLLANGIYIAIITTIFGLAVA-IILLPFYTYIKNKIEVQLDNIEIAK 202
>gi|325520277|gb|EGC99435.1| transport protein [Burkholderia sp. TJI49]
Length = 236
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+E + ++I + ++ +G + P +G+ G + GII A+ + S S ++
Sbjct: 100 LERHLRQQIQHARRREEAGLAVLASIGSTAPFVGLFGTVFGIIHALTAITHSASASIDVV 159
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T +GI ++
Sbjct: 160 AGPIGEALVATGIGIAVA 177
>gi|254439594|ref|ZP_05053088.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
gi|198255040|gb|EDY79354.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
Length = 211
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKIL 198
++ ++ +I L + + + + P +G+ G +LG+I A L P +L
Sbjct: 93 KSRIEADISAHLARLESGFRILDSIAQIAPLLGLFGTVLGMIDAFQALQDAGASVDPSLL 152
Query: 199 GTAIGVSLTGTLLGIILS 216
I V+L T G+ ++
Sbjct: 153 AGGIWVALLTTAAGLAVA 170
>gi|212635854|ref|YP_002312379.1| biopolymer transport ExbB protein [Shewanella piezotolerans WP3]
gi|212557338|gb|ACJ29792.1| Biopolymer transport exbB protein [Shewanella piezotolerans WP3]
Length = 209
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----- 193
+E+ + + + + + A+ + P IG++G +LG+I A NL Q
Sbjct: 88 DRQALEDKATLKAEQEIAQLKQGMRALEVISALAPLIGLLGTVLGMIDAFQNLQQAGTKV 147
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
P +L I +L T G+I++
Sbjct: 148 DPAVLSGGISQALLTTAAGLIVA 170
>gi|91793776|ref|YP_563427.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91715778|gb|ABE55704.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 450
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
N + ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 326 NNKDVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 385
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G+I + L L + + + ++ +IA
Sbjct: 386 FGTGDPKLMAGGISMALVTTVQGLIAALPLML-LHAIVVARSKSIVQVLEEQSAGIIA 442
>gi|320104850|ref|YP_004180441.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
gi|319752132|gb|ADV63892.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
Length = 346
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 59/152 (38%), Gaps = 20/152 (13%)
Query: 78 VLKLLYILMYNLKK------GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
++ L+ + L++ G E E +D S F I +++ L + +R
Sbjct: 120 LVALVIWMALKLRREVAIPSGLVRELEELLDQKAYSDAFQRI--SADDSYLARCLAAGLR 177
Query: 132 MIIVGNARSYEIENLMDEEID--IILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
+ G M+ + + +E Y ++ +G P IG+VG + G+I +
Sbjct: 178 KLPSG---PAAARRAMETANEDVAMEFEHRITY--LATVGTLGPMIGLVGTVYGMIISFR 232
Query: 190 NLSQ-----SPKILGTAIGVSLTGTLLGIILS 216
++ L I +L TL G+ LS
Sbjct: 233 VIATAGAAPQASDLAMGISTALFATLEGVTLS 264
>gi|241765691|ref|ZP_04763640.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241364439|gb|EER59547.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 213
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 115 TVLENNELTTFICDYMRMIIVG-NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
+ +N+ L + +R + ++ M+ + + K +A++ + + P
Sbjct: 63 QLAQNSALGEVLASGLRAVNNNPQCTEADLRATMEGTGRTVAHRLEKYLNALATIASAAP 122
Query: 174 AIGIVGAILGIIKAMGNL-----------SQSPKILGTAIGVSLTGTLLGIILS 216
+G++G ++G+I+ G+ +P L I ++L T G++++
Sbjct: 123 LLGLLGTVIGMIEIFGSQVGTGGASQAMGGGNPAQLAHGISIALYNTAFGLMVA 176
>gi|325529867|gb|EGD06707.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. TJI49]
Length = 279
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 18/172 (10%), Positives = 49/172 (28%), Gaps = 8/172 (4%)
Query: 53 VIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIF-- 110
I + ++ + + D ++ + G H+D+
Sbjct: 62 TILLAMAAVSWVVMWSKARYVGTVDKANQFFVQRFREVAGRHLGGLAHVDENSAEGRRLY 121
Query: 111 --TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM 168
+ D ++ I MD + K ++
Sbjct: 122 QSSLYRLYRAGVHEIHSRVDGNGRTVITTESIEAIRASMDATLVRENQRLSKSMVLLTIA 181
Query: 169 GESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
P +G++G ++G++ + + + I +L T+ G+ ++
Sbjct: 182 ISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVTGLFVA 233
>gi|113866635|ref|YP_725124.1| biopolymer transport channel protein [Ralstonia eutropha H16]
gi|113525411|emb|CAJ91756.1| biopolymer transport channel protein [Ralstonia eutropha H16]
Length = 239
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---SPKILGT 200
+++++E ++ +E + +A+ + P +G++G ++G+I+ G+ SP+ L
Sbjct: 126 KDVVEEAGRVVAHELERYLNALGTIASVAPLMGLLGTVIGMIEIFGSQGGTGASPEQLAH 185
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T G+I++
Sbjct: 186 GISVALYNTAFGLIVA 201
>gi|91780293|ref|YP_555500.1| MotA/TolQ/ExbB proton channel [Burkholderia xenovorans LB400]
gi|91692953|gb|ABE36150.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 240
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+E L+ ++I ++ +G + P +G+ G + GI+ AM +SQ
Sbjct: 98 ESLERLLRQQIVKERGSLESGLAILASVGSTAPFVGLFGTVFGIVHAMTAISQNGTADIG 157
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ IG +L T +GI ++
Sbjct: 158 VVAGPIGEALVTTGVGIAVA 177
>gi|320324430|gb|EFW80508.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
glycinea str. B076]
gi|320328162|gb|EFW84166.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 228
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+R +E + ++I ++ +G + P IG+ G + GII A+ +
Sbjct: 89 ADSWSRQELLERSLHQQIHSERRNLESGMIVLASIGSTAPFIGLFGTVFGIIHALQAIST 148
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILS 216
S S ++ IG +L T +GI ++
Sbjct: 149 AKSASIAVVAGPIGEALIATGIGIAVA 175
>gi|71737513|ref|YP_275035.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558066|gb|AAZ37277.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 228
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+R +E + ++I ++ +G + P IG+ G + GII A+ +
Sbjct: 89 ADSWSRQELLERSLHQQIHSERRNLESGMIVLASIGSTAPFIGLFGTVFGIIHALQAIST 148
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILS 216
S S ++ IG +L T +GI ++
Sbjct: 149 AKSASIAVVAGPIGEALIATGIGIAVA 175
>gi|115525465|ref|YP_782376.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115519412|gb|ABJ07396.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 687
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 5/124 (4%)
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
E S+++ + F + R + I +D
Sbjct: 512 GEEDAKLMRASSLYRIY-HIGAEQIRARFAGNGNRATALSGITIAAIRASLDSGYVKETQ 570
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI----LGTAIGVSLTGTLLG 212
+ ++ P +G++G ++G++ ++QS + + I +L T+ G
Sbjct: 571 RLNRLMVLLTIAISGGPFLGLLGTVVGVMITFAAIAQSGDVNVNAIAPGIAAALVATVAG 630
Query: 213 IILS 216
+ ++
Sbjct: 631 LFVA 634
>gi|330880022|gb|EGH14171.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 210
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+R +E + ++I ++ +G + P IG+ G + GII A+ +
Sbjct: 89 ADSWSRQELLERSLHQQIHSERRNLESGMIVLASIGSTAPFIGLFGTVFGIIHALQAIST 148
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILS 216
S S ++ IG +L T +GI ++
Sbjct: 149 AKSASIAVVAGPIGEALIATGIGIAVA 175
>gi|298527875|ref|ZP_07015279.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511527|gb|EFI35429.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 209
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 130 MRMIIVGNA-RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+R+++ G R + + M+ + + + M P +GI+G ++GII +
Sbjct: 72 IRVLVSGILHRDFSMGKAMESAAGEEIKRMQRFNGVLDTMITVAPLLGILGTVIGIIHSF 131
Query: 189 GNLSQS-----PKILGTAIGVSLTGTLLGIILSYSLCNPL 223
L Q+ P+ + I +L T G++++ P
Sbjct: 132 DILGQTGGIEEPREVTAGIAQALITTATGLVIAILALFPF 171
>gi|187478591|ref|YP_786615.1| biopolymer transport protein [Bordetella avium 197N]
gi|115423177|emb|CAJ49708.1| biopolymer transport protein [Bordetella avium 197N]
Length = 198
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
++ + +A + + ++ I E + AI + P +G+ G ++G+I+ G
Sbjct: 77 VLRMRHAPREALRDAVETAGQGIAQELNRYIPAIGTVAMVAPLMGLFGTVVGMIEIFGAY 136
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
S P L I V+L T GI+++
Sbjct: 137 NPGSTDPAQLAHGISVALYNTGFGILIA 164
>gi|325265637|ref|ZP_08132327.1| TonB family auxiliary protein ExbB [Kingella denitrificans ATCC
33394]
gi|324982907|gb|EGC18529.1| TonB family auxiliary protein ExbB [Kingella denitrificans ATCC
33394]
Length = 219
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F ++ + +E + I+ A++ +G + P IG++G + GI
Sbjct: 87 FRDGSLQQLSGSLPEPEFLEREVRHSASKIMSRFEGGMTALATIGSTAPFIGLLGTVWGI 146
Query: 185 IKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A+ N+S+ S + IG +L T +G+ ++
Sbjct: 147 YHALINISKSGQMSIAEVSGPIGEALVATAVGLFVA 182
>gi|319793940|ref|YP_004155580.1| mota/tolq/exbb proton channel [Variovorax paradoxus EPS]
gi|315596403|gb|ADU37469.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus EPS]
Length = 210
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-------- 191
++ M+ I ++ + A++ + + P +G++G ++G+I+ G+
Sbjct: 89 EDDLRAAMEASGRTIAHKLERYLPALATIASAAPLLGLLGTVIGMIEIFGSQSPVNGAVG 148
Query: 192 SQSPKILGTAIGVSLTGTLLGIILS 216
S +P L I ++L T G+I++
Sbjct: 149 SGNPAQLAHGISIALYNTAFGLIVA 173
>gi|149928091|ref|ZP_01916338.1| probable exbB-like biopolymer transport [Limnobacter sp. MED105]
gi|149823177|gb|EDM82414.1| probable exbB-like biopolymer transport [Limnobacter sp. MED105]
Length = 204
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 69/169 (40%), Gaps = 11/169 (6%)
Query: 51 LKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIF 110
+I +G + + + L +++ ++ L+K D F
Sbjct: 2 WSIISAAGWPIWPLIFGSVVA-------LAIVFERVWALRKKDLIPENLVTDVCKTLPQF 54
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGE 170
+ E + + M + ++ +IE+ M ++ I K +S +
Sbjct: 55 KDRQNIAR-LEAHSALGSLMAAGLSAFYKNEDIESAMQDKSVGIQNTLEKHLDVLSMIAS 113
Query: 171 SLPAIGIVGAILGIIKAM---GNLSQSPKILGTAIGVSLTGTLLGIILS 216
+ P +G++G ++G+I+ G+ +Q+P+ + I V+L T G+I++
Sbjct: 114 AAPLMGLLGTVIGMIEIFAVQGSGTQTPEAIAAGIAVALYNTAFGLIVA 162
>gi|119475460|ref|ZP_01615813.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
gi|119451663|gb|EAW32896.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
Length = 464
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+ +E + E I + + + + + P +G++G + G+I ++
Sbjct: 342 TMDTETLELKLSEAIMKEVPKIELGLNLLKIIAAVAPLMGLLGTVTGMIITFQAITIFGA 401
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
PK + I +L T+LG++++
Sbjct: 402 GDPKAMAGGISGALVTTVLGLLVA 425
>gi|149908164|ref|ZP_01896828.1| putative biopolymer transport proteinExbB-related protein
[Moritella sp. PE36]
gi|149808706|gb|EDM68639.1| putative biopolymer transport proteinExbB-related protein
[Moritella sp. PE36]
Length = 495
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
++ + + + E+ LM+ ID K + + P +G++G + G+I+
Sbjct: 352 NIKSALHNSTEALELR-LMEVVID-EQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETF 409
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCN 221
++Q PK++ I ++L T+LG++ + L
Sbjct: 410 QVITQFGNGDPKVMAGGISMALITTVLGLVAAMPLLL 446
>gi|71278525|ref|YP_270633.1| MotA/TolQ/ExbB proton channel family protein [Colwellia
psychrerythraea 34H]
gi|71144265|gb|AAZ24738.1| MotA/TolQ/ExbB proton channel family protein [Colwellia
psychrerythraea 34H]
Length = 457
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 80/235 (34%), Gaps = 37/235 (15%)
Query: 21 MGGNPYIL-IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL 79
GGN + P G + ++ P +K+ + +
Sbjct: 233 SGGNTTSFALDPT------GGSILSLLVQAP--DLKERVDQGGPV--------GYIILAI 276
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNAR 139
L+ +L+ + S + ++ S + +S +N L M + N
Sbjct: 277 GLVGLLIALERLISLVFIGSRVERQLKSAVASS------DNPL------GRVMQVKDNNP 324
Query: 140 SYEIENLMDEEIDIILYEKLKPYH---AISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+ + E L + + IL E K I + P IG++G + G+I ++
Sbjct: 325 NLDTETLELKLSESILREVPKLSKRLTLIKIISVVAPLIGLLGTVTGMINTFQAITLFGT 384
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
PK++ I +L T+LG++++ + + + +IA
Sbjct: 385 GDPKLMAGGISQALVTTVLGLVVAIPMVFIFA-YLNGRSRNIVNILQQESTGIIA 438
>gi|167624642|ref|YP_001674936.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167354664|gb|ABZ77277.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 451
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 5/192 (2%)
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LL IF KA +D + YI+M L G+ E I + L+N
Sbjct: 254 LLNIFTQKATIEDRIEAGGTIGYIIMALLALGALISIERLITLGVVGAKVKAQRKHLDNP 313
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +E +DE I I + P +G++G
Sbjct: 314 GNNPLGRVLKAYQDNKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGT 373
Query: 181 ILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
+ G+I ++ + PK++ I ++L T+ G++ + L + + + + +
Sbjct: 374 VTGMIATFQSIQLFGTGDPKLMAGGISMALMTTVQGLVAALPLML-MHAVVIARSKSIVQ 432
Query: 237 LYIIVKKALIAY 248
+ ++A
Sbjct: 433 ILEEQSAGIVAS 444
>gi|328471717|gb|EGF42594.1| biopolymer transport protein ExbB [Vibrio parahaemolyticus 10329]
Length = 453
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y++ + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFI 441
>gi|149908300|ref|ZP_01896964.1| TonB system biopolymer transport component [Moritella sp. PE36]
gi|149808842|gb|EDM68775.1| TonB system biopolymer transport component [Moritella sp. PE36]
Length = 470
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
+ + + P +G++G + G+I ++ + PK++ I ++L T++G
Sbjct: 340 RLERGSSVLKVLAAIAPMMGLLGTVTGMIATFQSITLFGTGDPKLMAGGISMALITTVMG 399
>gi|91225002|ref|ZP_01260261.1| putative TolR [Vibrio alginolyticus 12G01]
gi|91190248|gb|EAS76518.1| putative TolR [Vibrio alginolyticus 12G01]
Length = 453
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y++ + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFI 441
>gi|114320999|ref|YP_742682.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114227393|gb|ABI57192.1| outer membrane transport energization protein ExbB [Alkalilimnicola
ehrlichii MLHE-1]
Length = 239
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 45/141 (31%), Gaps = 6/141 (4%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT-TFICDYMRMIIVG 136
++ L ++ E + ++ TV + MR +
Sbjct: 36 IVLLKVWQFRAVRLTRMGFVEEALQHWREGRDQAALDTVSNTRNPAGPVLAVAMRGCLDR 95
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
+ + + + + +G P +G++G ++G+I+A L
Sbjct: 96 QVPTELVREEVTRIASASMERLRSMIRGLEVIGALAPMLGLLGTVIGMIQAFQQLEGAGS 155
Query: 194 --SPKILGTAIGVSLTGTLLG 212
P +L I V+L T G
Sbjct: 156 NVDPALLSGGIWVALLTTAAG 176
>gi|269965896|ref|ZP_06179989.1| putative TolR [Vibrio alginolyticus 40B]
gi|269829449|gb|EEZ83690.1| putative TolR [Vibrio alginolyticus 40B]
Length = 453
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y++ + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFI 441
>gi|56460958|ref|YP_156239.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56179968|gb|AAV82690.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 455
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
NA +E +DE I + I + P +G++G ++G+I ++ +
Sbjct: 336 NADVENLELKLDEAILRETPRVESGINVIKILAAIAPLLGLLGTVVGMIGTFQSITLFGT 395
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCN 221
PKI+ I ++L T +G+I + L
Sbjct: 396 GDPKIMAGDISMALVTTAMGLIAAIPLIL 424
>gi|28896940|ref|NP_796545.1| putative TolR [Vibrio parahaemolyticus RIMD 2210633]
gi|153837881|ref|ZP_01990548.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|260365871|ref|ZP_05778365.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
gi|260877842|ref|ZP_05890197.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|260895509|ref|ZP_05904005.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|260902533|ref|ZP_05910928.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
gi|28805148|dbj|BAC58429.1| putative TolR [Vibrio parahaemolyticus RIMD 2210633]
gi|149748744|gb|EDM59589.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|308088587|gb|EFO38282.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|308089863|gb|EFO39558.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|308109699|gb|EFO47239.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
gi|308113413|gb|EFO50953.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
Length = 453
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y++ + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFI 441
>gi|262197823|ref|YP_003269032.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262081170|gb|ACY17139.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 218
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 66/179 (36%), Gaps = 14/179 (7%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
IL ++ E + + + +++ ++ I G A +
Sbjct: 36 RILFLRARRIDVRELSREVARALDDDDLAPLKKKYTDSDAM-----AAQVAIRGLAERHH 90
Query: 143 IENLMDEEIDIILYEKLKPYH----AISHMGESLPAIGIVGAILGIIKAMGNLSQS---- 194
+ E ++ K Y + +G + P IG+ G +LGII+A +LS +
Sbjct: 91 GTDAASEAMNSGKTRARKDYERYLVILGTLGNNAPFIGLFGTVLGIIQAFQDLSGNAQGG 150
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+++ I +L T +G++++ + + + + +++ ++G
Sbjct: 151 AEVVMGGISEALVATAIGLLVAIPAVVAF-NYFNRRVREAISVTDDIAHTILSELHGRA 208
>gi|78485240|ref|YP_391165.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78363526|gb|ABB41491.1| TolQ protein [Thiomicrospira crunogena XCL-2]
Length = 229
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 9/136 (6%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++M + G S ++ + M + ++ +G S P IG+ G +
Sbjct: 86 FKEFMSLKSQGVIDSADLINGTQRAMRVAFSKQIERLENQTPLLATVGSSAPYIGLFGTV 145
Query: 182 LGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
G++ A +L + + I +L T +G+ + +++ K
Sbjct: 146 WGVMHAFSSLGDIQNATLASVAPGISEALIATAMGLFAAIPAVI-AYNRLSVNTDKVIGQ 204
Query: 238 YIIVKKALIAYMNGAI 253
Y + + +
Sbjct: 205 YENFAEGFLTIIQRQS 220
>gi|270156708|ref|ZP_06185365.1| protein TolQ [Legionella longbeachae D-4968]
gi|289164844|ref|YP_003454982.1| TolQ, involved in the tonB-independent uptake of proteins
[Legionella longbeachae NSW150]
gi|269988733|gb|EEZ94987.1| protein TolQ [Legionella longbeachae D-4968]
gi|288858017|emb|CBJ11877.1| putative TolQ, involved in the tonB-independent uptake of proteins
[Legionella longbeachae NSW150]
Length = 224
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 5/132 (3%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+++R GN I+ +M + + + +G P +G+ G + GI+
Sbjct: 88 FREFIRARKQGNVVIEPIQRVMQITHAKEAEKLERHLPFFASVGSIAPYVGLFGTVWGIM 147
Query: 186 KAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+ L + ++ I +L T LG+ + ++ + + +
Sbjct: 148 TSFQALGHAQQATIAMVAPGISEALVATALGLFTAIPAVI-AYNRYTTRANDLLNRFDLF 206
Query: 242 KKALIAYMNGAI 253
++ LI+ +
Sbjct: 207 QEELISLIEQQN 218
>gi|237797486|ref|ZP_04585947.1| TonB system transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331020336|gb|EGI00393.1| TonB system transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 230
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++I ++ +G + P IG+ G + GII A+ +SQ S ++
Sbjct: 98 LERSLRQQIHKERRHLESGMILLASIGSTAPFIGLFGTVFGIIHALTAISQAKSASIAVV 157
Query: 199 GTAIGVSLTGTLLGI------ILSYSLCN 221
IG +L T +GI +L+Y+
Sbjct: 158 AGPIGEALVATGVGIAVAVPAVLAYNFFG 186
>gi|254228577|ref|ZP_04922002.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262392631|ref|YP_003284485.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
gi|151938959|gb|EDN57792.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262336225|gb|ACY50020.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
Length = 453
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y++ + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFI 441
>gi|192359874|ref|YP_001982789.1| ExbB [Cellvibrio japonicus Ueda107]
gi|190686039|gb|ACE83717.1| ExbB [Cellvibrio japonicus Ueda107]
Length = 243
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQ 193
R +E + ++I ++ +G + P +G+ G + GII+A+ N S
Sbjct: 94 DRQDLLERHLRQQIQKERRSLESGLAVLASIGTTAPFVGLFGTVFGIIEALTAITSNSSA 153
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
S +++ IG +L T GI ++
Sbjct: 154 SIEVVAGPIGHALVATGFGIAVA 176
>gi|153213369|ref|ZP_01948758.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae 1587]
gi|153824812|ref|ZP_01977479.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-2]
gi|124116022|gb|EAY34842.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae 1587]
gi|149741530|gb|EDM55560.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-2]
Length = 457
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 56/150 (37%), Gaps = 8/150 (5%)
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHA 164
T+ I L+ E + + + +E L ++ ++ E+
Sbjct: 292 TLRQKIKAQLKKPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSM 351
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ + P +G++G + G+I+ ++Q PK++ I ++L T+ G+I + L
Sbjct: 352 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLL 411
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ + + + L+A
Sbjct: 412 L-AHNILSAQAEAIRNILEKQGIGLVAQQA 440
>gi|317052096|ref|YP_004113212.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316947180|gb|ADU66656.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 455
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
+E +DEEI + I + P +G++G ++G+I+ + +
Sbjct: 330 ETDVETMELRLDEEILREVPRLEWGLTTIKILAAVAPLLGLLGTVVGMIETFQAITLFGT 389
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
P+++ I +L T LG++++ L L + + L+A
Sbjct: 390 GDPQLMAGGISQALVTTALGLVVAIPLLF-LHNLATAKSRALINTMEEQGAGLLA 443
>gi|134293914|ref|YP_001117650.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134137071|gb|ABO58185.1| outer membrane transport energization protein ExbB [Burkholderia
vietnamiensis G4]
Length = 601
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 39/101 (38%), Gaps = 5/101 (4%)
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+E+ + + R +I + I MD + K ++ P +G++G
Sbjct: 456 HEIHSRVDGNGRTVITSESIE-AIRASMDATLVRENQRLSKSMVLLTIAISGGPFLGLLG 514
Query: 180 AILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++G++ + + + I +L T+ G+ ++
Sbjct: 515 TVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVTGLFVA 555
>gi|83950280|ref|ZP_00959013.1| MotA/TolQ/ExbB proton channel family domain protein [Roseovarius
nubinhibens ISM]
gi|83838179|gb|EAP77475.1| MotA/TolQ/ExbB proton channel family domain protein [Roseovarius
nubinhibens ISM]
Length = 222
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
+G + + + + E + + + + + + P +G+ G +LG+I+A L +
Sbjct: 84 MGFSGQADDLDRLRSEAEARFARLERGFRFLDTVSQLAPLLGLFGTVLGMIQAFQALQEA 143
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
P IL I V+L T +G+ ++
Sbjct: 144 GSQVDPSILAGGIWVALLTTAVGLAVA 170
>gi|85703632|ref|ZP_01034736.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp. 217]
gi|85672560|gb|EAQ27417.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp. 217]
Length = 226
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R A ++ E D + + + + + P +G+ G +LG+I+A
Sbjct: 86 RAFATDGASDSAAVRRLEAEADARFSRLERGFRFLDTVAQVAPLLGLFGTVLGMIEAFQA 145
Query: 191 LSQ-----SPKILGTAIGVSLTGTLLGIILS 216
L P +L I V+L T G+ ++
Sbjct: 146 LQSAGSQVDPSLLAGGIWVALLTTAAGLAVA 176
>gi|325960151|ref|YP_004291617.1| MotA/TolQ/ExbB proton channel [Methanobacterium sp. AL-21]
gi|325331583|gb|ADZ10645.1| MotA/TolQ/ExbB proton channel [Methanobacterium sp. AL-21]
Length = 279
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ +G + E+E+ M+ + + K +++ + E P +G++G ++GI +
Sbjct: 91 LKIGYRNNVEVEDAMERVFIVEMGNMTKGLNSLKTIIEIAPLLGLIGTVIGIWVTFKAMG 150
Query: 193 QSP--KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
S + I ++L T+ G+ ++ + P+ S I S ++ I K
Sbjct: 151 ISANTSQMAEGIYIALITTIAGLTVA-IVILPMYSYINSKIEEEIDKIDIAK 201
>gi|146339255|ref|YP_001204303.1| biopolymer transport protein ExbB/TolQ family [Bradyrhizobium sp.
ORS278]
gi|146192061|emb|CAL76066.1| Putative Biopolymer transport protein, ExbB/TolQ family
[Bradyrhizobium sp. ORS278]
Length = 651
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 23/225 (10%), Positives = 62/225 (27%), Gaps = 9/225 (4%)
Query: 35 VIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSR 94
V++ + + V+ D L I A + D + L+ ++ +
Sbjct: 421 VVIGLLAVMAVI---SWFVMYDRVSYLNRISRANATFLKHFRDGTVEISELLSADQQDTD 477
Query: 95 NETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM--RMIIVGNARSYEIENLMDEEID 152
I + P N I + I ++D
Sbjct: 478 LSLGGRITKKKETRALQRSPLFRLFNLGAEQIRRRFARGQSSLSGPAIESIRAVLDSGFV 537
Query: 153 IILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTG 208
+ ++ P +G++G ++G++ + + + I +L
Sbjct: 538 QETQRLNRMMVMLTIAISGGPFLGLLGTVVGVMITFAAIAATGDVNVNAIAPGIAAALVA 597
Query: 209 TLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
T+ G+ ++ I + + + + + +
Sbjct: 598 TVAGLGVAIPALFAYNYLITRIKDATSEMQVFIDEMITRIAETYS 642
>gi|114799765|ref|YP_761324.1| MotA/TolQ/ExbB proton channel family protein [Hyphomonas neptunium
ATCC 15444]
gi|114739939|gb|ABI78064.1| MotA/TolQ/ExbB proton channel family protein [Hyphomonas neptunium
ATCC 15444]
Length = 464
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
NA +E +DE+I + I + P +G++G ++G+I ++
Sbjct: 340 NADVETLELKLDEQILRESPRIERFNDIIKVLAAVAPLLGLLGTVVGMIITFTAITIYGA 399
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
PK++ I V+L T+ G++ + L + + + + +L L+A
Sbjct: 400 GDPKLMAGGISVALMTTVFGLVAAIPLLL-IHAVVSAMARSNQQLLDEQAAGLVA 453
>gi|110681313|ref|YP_684320.1| MotA/TolQ/ExbB proton channel family protein [Roseobacter
denitrificans OCh 114]
gi|109457429|gb|ABG33634.1| MotA/TolQ/ExbB proton channel family domain protein [Roseobacter
denitrificans OCh 114]
Length = 224
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKI 197
+ + + +E L Y + + + P +G+ G +LG+I A L + P +
Sbjct: 97 VNDRLVKEAAANLSRLEGGYRILDSIAQISPLLGLFGTVLGMIDAFRALQEAGAAVDPSL 156
Query: 198 LGTAIGVSLTGTLLGIILS 216
L I V+L T +G+ ++
Sbjct: 157 LAGGIWVALLTTAVGLAVA 175
>gi|307823253|ref|ZP_07653483.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307736028|gb|EFO06875.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 221
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
S +E+ + ++ + ++ +G + P +G+ G +LGI+ AM + S
Sbjct: 97 GVPSELLEHSLLVQMQQEQHAMESGLTMLASIGSTSPFVGLFGTVLGIMHAMHEITASGS 156
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
S ++ IG +L T +GI ++
Sbjct: 157 TSLDVVAGPIGDALVATAIGIAVA 180
>gi|254455761|ref|ZP_05069190.1| protein TolQ [Candidatus Pelagibacter sp. HTCC7211]
gi|207082763|gb|EDZ60189.1| protein TolQ [Candidatus Pelagibacter sp. HTCC7211]
Length = 224
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 62/172 (36%), Gaps = 27/172 (15%)
Query: 49 NPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNST 108
VI + +I ++ + + N ++DP
Sbjct: 44 YSWAVIIEKFRLFKKINKSSEEFEEKF---------WNSKSAENFYNSLPTKVEDPMALV 94
Query: 109 IFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHM 168
+++ +L+ T S + +++ ++ + + K + ++ +
Sbjct: 95 FQSAMEGLLKKKSKTNL--------------SERMTAMLETGVEKQMTKIDKGFTFLATV 140
Query: 169 GESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
G + P IG+ G + GI+ + ++ + S I+ I +L T LG++ +
Sbjct: 141 GSTAPFIGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEALFATALGLLAA 192
>gi|254452911|ref|ZP_05066348.1| protein TolQ [Octadecabacter antarcticus 238]
gi|198267317|gb|EDY91587.1| protein TolQ [Octadecabacter antarcticus 238]
Length = 216
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
I+ MD I + ++ +G S P IG++G ++GI+ A +++ + +
Sbjct: 100 RIDRSMDVAIAKETERLQRGLTVLATVGSSAPFIGLLGTVMGIMNAFIEIAEQQNTNLAV 159
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T LG++ +
Sbjct: 160 VAPGIAEALLATGLGLMAA 178
>gi|91781063|ref|YP_556270.1| MotA/TolQ/ExbB proton channel [Burkholderia xenovorans LB400]
gi|91693723|gb|ABE36920.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 250
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 25/188 (13%)
Query: 33 EIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKG 92
I+IV + V+ G +L + A+ + + +
Sbjct: 19 AILIVL-----ATMSVLSWAVVFAKGATLTRVRQQSAVAERRF---------WTASTYDE 64
Query: 93 SRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEID 152
I++PY + E + I D +++I R+ + + +D
Sbjct: 65 GIALLGKQIENPYR-------DLAIAGREASEQIFDAQQLLIGSLNRNEWVSRCLKVSLD 117
Query: 153 IILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVS----LTG 208
+ + ++ +G + P +G+ G + GI A+ + S + + L
Sbjct: 118 DYVARLQRGTAILASVGSTAPFVGLFGTVWGIYHALMAIGASAQASLDHVAGPVGESLIM 177
Query: 209 TLLGIILS 216
T G+ ++
Sbjct: 178 TAFGLFVA 185
>gi|254441621|ref|ZP_05055114.1| protein TolQ [Octadecabacter antarcticus 307]
gi|198251699|gb|EDY76014.1| protein TolQ [Octadecabacter antarcticus 307]
Length = 224
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
I+ MD I + ++ +G S P IG++G ++GI+ A +++ + +
Sbjct: 108 RIDRSMDVAIAKETERLQRGLTVLATVGSSAPFIGLLGTVMGIMNAFIEIAEQQNTNLAV 167
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T LG++ +
Sbjct: 168 VAPGIAEALLATGLGLMAA 186
>gi|56461218|ref|YP_156499.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56180228|gb|AAV82950.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 459
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 172 LPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
P +G++G + G+I ++ PK++ I +L T+LG++++ + + +
Sbjct: 374 APLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISQALVTTVLGLVVAIPMTLLFAT-L 432
Query: 228 KSTRLKQHRLYIIVKKALIA 247
+ + +IA
Sbjct: 433 HTRSKNLIHILQEQASGIIA 452
>gi|153833914|ref|ZP_01986581.1| TolR [Vibrio harveyi HY01]
gi|148869752|gb|EDL68729.1| TolR [Vibrio harveyi HY01]
Length = 453
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y++ + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFI 441
>gi|309389286|gb|ADO77166.1| outer membrane transport energization protein ExbB [Halanaerobium
praevalens DSM 2228]
Length = 216
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 13/128 (10%)
Query: 136 GNARSYEIENLMDE--EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
+ + ++ E +I E+ P + + P +G++G ++GII + L
Sbjct: 86 NSEDPSRLREVLKAVGEDEIKKMERHLP--ILDVVAMISPLLGLLGTVIGIISSFNILGT 143
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYS---LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+P + + I +L T LG+I++ + +++ Q L ++ +
Sbjct: 144 AAGAANPAQISSGIAAALISTALGLIIAIPTAIFYSYFAHKVEKRAH-QMNLSLVEIVDV 202
Query: 246 IAYMNGAI 253
++ G
Sbjct: 203 VSNNRGDS 210
>gi|291286884|ref|YP_003503700.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884044|gb|ADD67744.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 447
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 45/117 (38%), Gaps = 4/117 (3%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
++ +++++ + + +S P +G++G + G+I +
Sbjct: 321 VMSSAGKPRNVRSDILEQALISESSVLERNLSFLSVAAAVSPMLGLMGTVTGMISTFHAI 380
Query: 192 ----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
S P+++ I +LT T+LG+ + + +T + T RL K
Sbjct: 381 TVYGSSDPRMMAGGISEALTTTMLGLTAAIPIMLAVTIFNRRTENLTDRLQECAVKV 437
>gi|269959386|ref|ZP_06173769.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835823|gb|EEZ89899.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 453
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y++ + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFI 441
>gi|156972958|ref|YP_001443865.1| biopolymer transport protein [Vibrio harveyi ATCC BAA-1116]
gi|156524552|gb|ABU69638.1| hypothetical protein VIBHAR_00636 [Vibrio harveyi ATCC BAA-1116]
Length = 453
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y++ + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFI 441
>gi|304320856|ref|YP_003854499.1| TonB system biopolymer transport component [Parvularcula
bermudensis HTCC2503]
gi|303299758|gb|ADM09357.1| TonB system biopolymer transport component [Parvularcula
bermudensis HTCC2503]
Length = 459
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAM 188
M+ + +IE L + D IL E + + + P +G++G ++G+I
Sbjct: 332 MMAYDSNTQADIETLQLKLDDAILRELPKLEGGLNLVKVLAAIAPLMGLLGTVVGMIVTF 391
Query: 189 GNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ + P+I+ I +L T+LG+I S L
Sbjct: 392 QQITLFGTGDPQIMAGGISQALVTTVLGLIASIPLLL 428
>gi|303229070|ref|ZP_07315876.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
gi|303230886|ref|ZP_07317630.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302514399|gb|EFL56397.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302516281|gb|EFL58217.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
Length = 203
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 81 LLYILMYNLKKGS--RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+L+ + ++ + + I+ N+ + ++ ++NN + ++ I+
Sbjct: 28 ILFERIRMYRRIDSEIQQLSSSIEAGRNANDWIALEQAIKNN--DDALSQFVTPIVDSVY 85
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS---P 195
+EN + + + + + + +S M P +G++G ++G+I++ + P
Sbjct: 86 NFEGLENRLHDVVGYMDERLKRGLNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAP 145
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ + +L T G+ ++
Sbjct: 146 TVITGGVSEALIATATGLSVA 166
>gi|254510099|ref|ZP_05122166.1| MotA/TolQ/ExbB proton channel family domain protein
[Rhodobacteraceae bacterium KLH11]
gi|221533810|gb|EEE36798.1| MotA/TolQ/ExbB proton channel family domain protein
[Rhodobacteraceae bacterium KLH11]
Length = 220
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+ + + +++ +D E + L + + + + + + P +G+ G +LG+I A +L
Sbjct: 82 VAMYAPDTPDLDARLDAEAGLALAKLERGFRLLDTVAQIAPLLGLFGTVLGMIDAFQSLQ 141
Query: 192 ----SQSPKILGTAIGVSLTGTLLGIILS 216
S P +L I V+L T G+ ++
Sbjct: 142 SAGSSVDPSLLAGGIWVALVTTAAGLAVA 170
>gi|296121947|ref|YP_003629725.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296014287|gb|ADG67526.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 235
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 137 NARSYEIENL-MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
+ EI N +D+ + E ++ + +S P +G++G + G+I A G +
Sbjct: 92 DIPPAEIRNFALDQFEREVQAELEHKVMWVNTVIKSAPMLGLLGTVAGMIAAFGKIASMQ 151
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
P +L I ++L T +G++++ L +++ + R Q + I+
Sbjct: 152 KSGTDPSMLANDISLALITTAVGLVIAVPLMIAISAILIRVRKLQFEVDQIL 203
>gi|239815624|ref|YP_002944534.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
gi|239802201|gb|ACS19268.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
Length = 210
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-------- 191
++ M+ + ++ + A++ + + P +G++G ++G+I+ G+
Sbjct: 89 EDDLRAAMEASGRTVAHKLERYLPALATIASAAPLLGLLGTVIGMIEIFGSQSPGSGAVG 148
Query: 192 SQSPKILGTAIGVSLTGTLLGIILS 216
S +P L I ++L T G+I++
Sbjct: 149 SGNPAQLAHGISIALYNTAFGLIVA 173
>gi|325110932|ref|YP_004272000.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324971200|gb|ADY61978.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 238
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 125 FICDYMRM-IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
F+ D ++ + +++ +++ ++ ++ +G P +G++G + G
Sbjct: 92 FLGDMIQAGLSETEMGYLQVQKALEDASAEHSARMMRKVEYLNVIGTIAPMLGLLGTVWG 151
Query: 184 IIKAM----GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+I+A S S I +L TL+G+ ++ +++ +
Sbjct: 152 MIQAFLEFESQASPSVSEFAPGISHALITTLMGLSVAIPALGAFAI-LRNRVDE 204
>gi|163802271|ref|ZP_02196166.1| putative TolR [Vibrio sp. AND4]
gi|159174076|gb|EDP58886.1| putative TolR [Vibrio sp. AND4]
Length = 453
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E +DE I + +I P +G++G ++G+I + +
Sbjct: 329 GDNLEDLEAKLDEIILRNAPSIERFIGSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y++ + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFI 441
>gi|121611790|ref|YP_999597.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121556430|gb|ABM60579.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 216
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 61/157 (38%), Gaps = 23/157 (14%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIP------TVLENNELTTFICDYMR 131
++ ++ + + + I + F ++P + +N+ L + +R
Sbjct: 25 LIFERFVALKTARVAPPRLLDEAI-----TVSFKALPPPDVVNQLAQNSALGEVLASGLR 79
Query: 132 MIIVGNA-RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
+ A E+ M + + K A++ + + P +G++G ++G+I+ G+
Sbjct: 80 ALNSNPACSETELRAAMQGTGRAVAHRLEKYLPALATIASAAPLLGLLGTVIGMIEIFGS 139
Query: 191 LSQS-----------PKILGTAIGVSLTGTLLGIILS 216
+ P +L I +L T G+I++
Sbjct: 140 QAGPGDMGQAIGGSNPAMLAHGISTALYNTAFGLIVA 176
>gi|332307698|ref|YP_004435549.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175027|gb|AEE24281.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 467
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 77/198 (38%), Gaps = 11/198 (5%)
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+G S+L++ ++ + YI++ G E I + I T +
Sbjct: 260 TGGSILKLLVQAPSLKERVEQGGLVGYIILIVGAIGLLLALERLI---SLTIIKTKVNKQ 316
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH---AISHMGESLP 173
L++++ T+ M + + E+L + IL E K I + P
Sbjct: 317 LKSDKFTSNNPLGRVMQVRDKYPEADTESLELHLTEAILGEIPKLSRNLTIIKIISVVAP 376
Query: 174 AIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
+G++G + G+I ++ PK++ I +L T+LG++++ + L + + +
Sbjct: 377 LMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTALVTTVLGLVVAIPMTL-LYAMLNT 435
Query: 230 TRLKQHRLYIIVKKALIA 247
+ +IA
Sbjct: 436 RSKDVVFILQEQASGVIA 453
>gi|149177284|ref|ZP_01855889.1| probable TolQ-type transport protein [Planctomyces maris DSM 8797]
gi|148843809|gb|EDL58167.1| probable TolQ-type transport protein [Planctomyces maris DSM 8797]
Length = 284
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKIL 198
+E M++ + +S +G P +G++G + G+I A + L
Sbjct: 134 VEKAMEDAAMQQSARLNRKIEYLSVIGTLSPMLGLLGTVWGMILAFSEFTAKANPDVAEL 193
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAI 258
I +L TL G+ ++ ++ + ++ + + A + P A
Sbjct: 194 APGISKALITTLFGLSVTVPALASFAF-FRNRIDELVAQSSLLAEHVFADFKRSTPAPAK 252
Query: 259 EYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
+ G+ PL +RP E +AQ + + +S
Sbjct: 253 QPGK---PLRKRPE-EELAQRLADQQGTRPSS 280
>gi|117617540|ref|YP_857924.1| hypothetical protein AHA_3435 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117558947|gb|ABK35895.1| TolR [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 457
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E+ +DE I + + K I + P +G++G ++G+I + +
Sbjct: 331 GDNIEDLESKLDEIILRNVPKFEKGISIIKLIASVAPLLGLLGTVVGMIATFQAITLFGT 390
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQ 234
PK++ I +L T+ G++++ Y++ + ++ +Q
Sbjct: 391 GDPKLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLEEQ 438
>gi|149198901|ref|ZP_01875943.1| transport protein TolQ-like protein [Lentisphaera araneosa
HTCC2155]
gi|149138099|gb|EDM26510.1| transport protein TolQ-like protein [Lentisphaera araneosa
HTCC2155]
Length = 447
Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+A ++E L++E I L + H +S + P +G++G ++GIIK +
Sbjct: 329 DAPREDLEELLNETILSELPRLDRLMHILSVSAGAAPLMGLLGTVMGIIKTFEMIGIYGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
L I +L T +G++++
Sbjct: 389 ADTNQLSLGISEALVTTEVGLVVA 412
>gi|90415504|ref|ZP_01223438.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
gi|90332827|gb|EAS47997.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
Length = 456
Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 53/139 (38%), Gaps = 9/139 (6%)
Query: 117 LENNELTTFICDYMRMIIVGNARS-YEIENLMDEEIDIILYEK---LKPYHAISHMGESL 172
L + R++ V A + E+L + + +L E+ + +
Sbjct: 313 LRSPGTADLANPLGRVLAVAQANPGLDPESLELKLHEAVLKERPAIESGLSLLKIIAMVA 372
Query: 173 PAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
P +G++G + G+I ++ PK + I +L T+LG++++ + + +
Sbjct: 373 PLLGLLGTVTGMIITFQMITLFGAGDPKAMAGGISQALITTVLGLVVAIPTVL-MHTLVN 431
Query: 229 STRLKQHRLYIIVKKALIA 247
+ + ++A
Sbjct: 432 GKAQRVLHILEEQSAGIVA 450
>gi|90424416|ref|YP_532786.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90106430|gb|ABD88467.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 680
Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 62/189 (32%), Gaps = 11/189 (5%)
Query: 36 IVAGAGLGGFVMANPLKVIKDSG----VSLLEIFGYKALGQDTYCDVLKLLYILMYNLKK 91
+V G + + A V+ D + ++ D+ L +
Sbjct: 442 VVIG--ILAIMAALSWVVMVDRVSYLNKQTRANARFAKSFREVSSDLTMLDRGDADEIAT 499
Query: 92 GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEI 151
+E+ S+++ + F + R I+ I +D
Sbjct: 500 LGGRLSEDDATMMRASSLYRIY-HIGALEIRGRFAGNGTRAPILSATSIAAIRATLDSGY 558
Query: 152 DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI----LGTAIGVSLT 207
+ + + ++ P +G++G ++G++ ++ S + + I +L
Sbjct: 559 VKEMQKLNRLMVVLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALV 618
Query: 208 GTLLGIILS 216
T+ G+ ++
Sbjct: 619 ATVAGLGVA 627
>gi|254786070|ref|YP_003073499.1| transporter proton channel domain containing protein
[Teredinibacter turnerae T7901]
gi|237684079|gb|ACR11343.1| transporter, proton channel domain containing protein
[Teredinibacter turnerae T7901]
Length = 450
Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 60/161 (37%), Gaps = 10/161 (6%)
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
E + + L+ E I M+ R ++E + + ++
Sbjct: 283 LIVLERMLSLMRTRSKMQRQLKNLDQVEEDNPIGRVMQAYF--EHRHLDLETISRKMQEV 340
Query: 154 ILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSL 206
I+++ + + + P +G++G ++G+I + + PK++ I +L
Sbjct: 341 IIHDMAGIRRGLSIVKVLAAVAPLMGLLGTVVGMIGTFQAITLFGTGDPKLMAGGISQAL 400
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
T+LG+ + L S + + + ++ L+A
Sbjct: 401 ITTVLGLCAAIPLLL-SHSMLAARATQIGKMISEQAAGLMA 440
>gi|183396675|dbj|BAG28274.1| MotA/TolQ/Exb proton channel [Desulfotignum balticum]
Length = 490
Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 139 RSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS--- 192
R + +++ + + IL E + + + P +G++G + G+I ++
Sbjct: 365 RDHSRQDMENALQEAILGEIPAIERFVSTLGMLAAIAPLLGLLGTVTGMINTFHVITYYG 424
Query: 193 -QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG+ ++ + + + Q
Sbjct: 425 AGDPKMMSGGISEALVTTMLGLTVAIPIML-FHTLLSRRVETQIGQME 471
>gi|239995809|ref|ZP_04716333.1| biopolymer transport proteins-like [Alteromonas macleodii ATCC
27126]
Length = 458
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+ E ++ + + + K I+ P +G++G + G+I+ + S
Sbjct: 324 STPTERDDELFSALQQDKIKLEKYNGTIAVTAAVAPLLGLLGTVSGMIETFRMMTAFGSS 383
Query: 194 SPKILGTAIGVSLTGTLLGIILS--YSLCNPLTSQIKSTRLKQHRLYIIVK 242
P+++ I +L T LG++++ + N + S+ ++ + +V
Sbjct: 384 DPEVISGGIAKALVTTELGLVVAIPALILNAVLSRKARHYYEELESFALVL 434
>gi|153000153|ref|YP_001365834.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|151364771|gb|ABS07771.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
Length = 451
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L + + + + ++ +IA
Sbjct: 387 FGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAVVVARSKSIVQILEEQSAGIIA 443
>gi|126173873|ref|YP_001050022.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|125997078|gb|ABN61153.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
Length = 451
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L + + + + ++ +IA
Sbjct: 387 FGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAVVVARSKSIVQILEEQSAGIIA 443
>gi|160874780|ref|YP_001554096.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|160860302|gb|ABX48836.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315267018|gb|ADT93871.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 451
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L + + + + ++ +IA
Sbjct: 387 FGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAVVVARSKSIVQILEEQSAGIIA 443
>gi|27364292|ref|NP_759820.1| TolR [Vibrio vulnificus CMCP6]
gi|27360410|gb|AAO09347.1| TolR [Vibrio vulnificus CMCP6]
Length = 453
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
++E +DE I + + +I P +G++G ++G+I ++
Sbjct: 329 GDNLEDLEAKLDEIILRNAPKIERFIVSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y+L + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFFYTLVHSKGRRLVQTLEEQSAGFI 441
>gi|77362430|ref|YP_342004.1| putative Tol protein [Pseudoalteromonas haloplanktis TAC125]
gi|76877341|emb|CAI89558.1| putative Tol protein [Pseudoalteromonas haloplanktis TAC125]
Length = 455
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 131 RMIIVGNARSYEIENLMDEEI-DIILYEKLKPYHAIS---HMGESLPAIGIVGAILGIIK 186
R++ V + + ++ ++ + IL E K ++ + P +G++G + G+I
Sbjct: 325 RVMKVKDDYPNVAYDTLELKLSEAILREMPKITRNLTLIKIISVVAPLLGLLGTVTGMIN 384
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ PK++ I +L T+LG++++ + + + + +
Sbjct: 385 TFQAITLFGTGDPKLMAGGISQALVTTVLGLVVAIPTVF-IYTILNTRAKSLLLILQEQS 443
Query: 243 KALIA 247
+IA
Sbjct: 444 AGIIA 448
>gi|37678432|ref|NP_933041.1| putative TolR protein [Vibrio vulnificus YJ016]
gi|320157685|ref|YP_004190064.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
gi|37197172|dbj|BAC93012.1| putative TolR protein [Vibrio vulnificus YJ016]
gi|319932997|gb|ADV87861.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
Length = 453
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
++E +DE I + + +I P +G++G ++G+I ++
Sbjct: 329 GDNLEDLEAKLDEIILRNAPKIERFIVSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGT 388
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYI 239
PK++ I +L T+LG++++ Y+L + ++ T +Q +I
Sbjct: 389 GDPKLMAGGISEALVTTMLGLVVAIPLLFFYTLVHSKGRRLVQTLEEQSAGFI 441
>gi|307823184|ref|ZP_07653414.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307735959|gb|EFO06806.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 221
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
A + +E+ + ++ + ++ +G + P +G+ G +LGI+ AM + S
Sbjct: 97 GAPAELLEHSLQVQMQREQHLMESGLTLLASIGSTSPFVGLFGTVLGIMHAMHEITASGS 156
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
S ++ IG +L T +GI ++
Sbjct: 157 TSLDVVAGPIGDALVATAIGIAVA 180
>gi|24373390|ref|NP_717433.1| MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
gi|24347659|gb|AAN54877.1|AE015626_6 MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
Length = 451
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 137 NARSYEIENLMDEEI--DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL--- 191
+ +E +DE I + E P + + P +G++G + G+I ++
Sbjct: 330 DVDVETLELKLDEAILKETPALEARIP--ILKVIAAIGPMLGLLGTVTGMIATFQSIQLF 387
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L L + + + ++ +IA
Sbjct: 388 GTGDPKLMAGGISMALVTTVQGLVAALPLML-LHAMLVARSKSITQILEEQSAGIIA 443
>gi|296272106|ref|YP_003654737.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296096281|gb|ADG92231.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 437
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIIL 215
K + + P +G++G + G+I + + PK++ I +L T+LG++
Sbjct: 343 KGQSFVKLLAAVTPLLGLLGTVTGMIATFQAITLFGTGDPKLMAGGISTALITTVLGLVT 402
Query: 216 SYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ L T I S + + L+A
Sbjct: 403 AIPLLFAYT-YISSKSEELVSILEEQSIGLLA 433
>gi|254522202|ref|ZP_05134257.1| biopolymer transport protein [Stenotrophomonas sp. SKA14]
gi|219719793|gb|EED38318.1| biopolymer transport protein [Stenotrophomonas sp. SKA14]
Length = 220
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N +I +++ +++ + +A+ + + P +G++G ++G+I+ +
Sbjct: 82 NRPRDQIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGV 141
Query: 194 -SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 142 GDVNQLAGGIGKALVCTATGMIVA 165
>gi|85711177|ref|ZP_01042237.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85695090|gb|EAQ33028.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 458
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 172 LPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
P +G++G + G+I ++ PK++ I +L T+LG++++ + +
Sbjct: 373 APLMGLLGTVTGMINTFQAITLFGTGDPKMMAGGISQALVTTVLGLVVAIPMTLLFAM-L 431
Query: 228 KSTRLKQHRLYIIVKKALIA 247
+ + +IA
Sbjct: 432 HTRSKNMIHILQEQASGIIA 451
>gi|77360131|ref|YP_339706.1| MotA/TolQ/ExbB proton channel protein [Pseudoalteromonas
haloplanktis TAC125]
gi|76875042|emb|CAI86263.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis TAC125]
Length = 454
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
N +E +DE I + I + P +G++G ++G+I + +
Sbjct: 333 NQDVENLELKLDEAILRETPRIEAGINIIKILAAIAPLLGLLGTVIGMILTFQTITLFGT 392
Query: 193 QSPKILGTAIGVSLTGTLLG 212
PKI+ I ++L T LG
Sbjct: 393 GDPKIMAGNISLALVTTALG 412
>gi|113970798|ref|YP_734591.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113885482|gb|ABI39534.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
Length = 451
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L + + + + ++ +IA
Sbjct: 387 FGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAVVVARSKSIVQVLEEQSAGIIA 443
>gi|58581922|ref|YP_200938.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58426516|gb|AAW75553.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 246
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
V I +++ +++ +A+ + + P +G++G ++G+I+ +
Sbjct: 106 VRGRPRELIRERIEDTGRHVVHRMEHYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDH 165
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 166 GVGDVNQLAGGIGKALVCTATGMIIA 191
>gi|94500769|ref|ZP_01307298.1| TonB system biopolymer transport component [Oceanobacter sp. RED65]
gi|94427091|gb|EAT12072.1| TonB system biopolymer transport component [Oceanobacter sp. RED65]
Length = 461
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+A + +E + E I + + I + P +G++G + G+I +S
Sbjct: 336 DADTETLELHLGEAISNEVPRLTAGVNWIKIISVVAPLLGLLGTVTGMIDVFETMSLFGT 395
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
PK++ I +L T+LG++ +
Sbjct: 396 GDPKLMAGGISQALVTTVLGLVAA 419
>gi|192360920|ref|YP_001981091.1| TonB system transport protein ExbB2 [Cellvibrio japonicus Ueda107]
gi|190687085|gb|ACE84763.1| TonB system transport protein ExbB2 [Cellvibrio japonicus Ueda107]
Length = 170
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+ + + E+D ++ +++ I + LP +G++G + G+I+ + S +P
Sbjct: 65 AEQQRKQLLSELDCMMSQRMT---LIPALIALLPMLGLLGTVTGMIQVFEVMAYLGSGNP 121
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
+ + + + T+ G+++S L P +++K L++ R
Sbjct: 122 RAMANGVSAATIPTMAGMVIS-LLGIPFATELKRRYLRELR 161
>gi|190573628|ref|YP_001971473.1| putative biopolymer transport protein [Stenotrophomonas maltophilia
K279a]
gi|190011550|emb|CAQ45169.1| putative biopolymer transport protein [Stenotrophomonas maltophilia
K279a]
Length = 220
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N +I +++ +++ + +A+ + + P +G++G ++G+I+ +
Sbjct: 82 NRPRDQIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGV 141
Query: 194 -SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 142 GDVNQLAGGIGKALVCTATGMIVA 165
>gi|77918459|ref|YP_356274.1| TolR-like transport protein [Pelobacter carbinolicus DSM 2380]
gi|77544542|gb|ABA88104.1| outer membrane transport energization protein ExbB [Pelobacter
carbinolicus DSM 2380]
Length = 470
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
IE+ + E I + A+ P +G++G + G+I + +
Sbjct: 343 GENREIIESSLSEAILRETPRLERFLSALKVAAAVAPLLGLLGTVTGMINTFQVITTHGT 402
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
P+++ I ++ T +G+ ++ + + S + S K +
Sbjct: 403 SDPRLMAGGISEAMVTTQVGLAVAIPVMM-IASFLGSRAHKLSQDME 448
>gi|330955709|gb|EGH55969.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 138
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++I ++ +G + P IG+ G + GII A+ +SQ S ++
Sbjct: 6 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALTAISQARSASIAVV 65
Query: 199 GTAIGVSLTGTLLGI------ILSYSLCN 221
IG +L T +GI +L+Y+
Sbjct: 66 AGPIGEALVATGVGIAVAVPAVLAYNFFG 94
>gi|117921066|ref|YP_870258.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
gi|117613398|gb|ABK48852.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 451
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L + + + + ++ +IA
Sbjct: 387 FGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAVVVARSKSIVQVLEEQSAGIIA 443
>gi|77164131|ref|YP_342656.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254436272|ref|ZP_05049779.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
gi|76882445|gb|ABA57126.1| outer membrane transport energization protein ExbB [Nitrosococcus
oceani ATCC 19707]
gi|207089383|gb|EDZ66655.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
Length = 478
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKA 187
R++ V ++E L + + IL E + ++ + P +G++G + G+I+
Sbjct: 338 RILGVYTGGREDVETLSLKLDEAILREIPSIERGLPVLAILAAIAPLLGLLGTVTGMIET 397
Query: 188 MGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++ + PK++ I +L T LG+ ++ + + S + S + ++
Sbjct: 398 FQSITLFGTGDPKLMSGGISQALVTTELGLAVAIPVLL-IHSSLSSKSNRLVQVLDEESA 456
Query: 244 ALIAYMNGAIPQVAIEY 260
A++A ++A E
Sbjct: 457 AIVA-------RLAEEK 466
>gi|92119098|ref|YP_578827.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91801992|gb|ABE64367.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 366
Score = 45.7 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 68/180 (37%), Gaps = 11/180 (6%)
Query: 42 LGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI 101
+G F+ A+ + G++L + + T ++LL L+ E +
Sbjct: 144 IGMFMAADYIVKSVMIGLALASVMTWSVWLAKT----IELLSARSKLLRDLRSVEGVRSL 199
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKL-K 160
++ N+ + + I + + E + I+ ++ +
Sbjct: 200 EEANNTLQRAGSDIAILTHAARDEIRR--SQDAMNHDGIKERVASLFSRIEAAAARRMTR 257
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI+ A +S+ + ++ I +L T +G++ +
Sbjct: 258 GTSILATIGSTAPFVGLFGTVWGIMNAFIGISKSQTTNLAVVAPGIAEALLATAMGLVAA 317
>gi|84623834|ref|YP_451206.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188576505|ref|YP_001913434.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|84367774|dbj|BAE68932.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520957|gb|ACD58902.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 220
Score = 45.7 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
V I +++ +++ +A+ + + P +G++G ++G+I+ +
Sbjct: 80 VRGRPRELIRERIEDTGRHVVHRMEHYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDH 139
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 140 GVGDVNQLAGGIGKALVCTATGMIIA 165
>gi|320109153|ref|YP_004184743.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
gi|319927674|gb|ADV84749.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
Length = 251
Score = 45.7 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 136 GNARSYEIEN---LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
G +IE+ ++ I+ + + +++ +G + P IG+ G ++GI+ A ++
Sbjct: 126 GAITEEQIESSKRALERSEAIVHAKLKRGLGSLATIGSTAPFIGLFGTVIGILHAFQQIA 185
Query: 193 QSPK----ILGTAIGVSLTGTLLGIILSYSLCNPL 223
QS + I +L T G++++
Sbjct: 186 QSKSTGIGAVAGGISEALVTTAFGLLVAIPAVMCF 220
>gi|192362143|ref|YP_001980995.1| MotA/TolQ/ExbB proton channel family protein [Cellvibrio japonicus
Ueda107]
gi|190688308|gb|ACE85986.1| MotA/TolQ/ExbB proton channel family protein [Cellvibrio japonicus
Ueda107]
Length = 460
Score = 45.7 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 131 RMIIVGNARS-YEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ V + + E L + + +L E+ + + P +G++G + G+I+
Sbjct: 328 RVLKVAEENAKVDTETLELKLEEAVLKERPAIESGLAILKIIAAVAPLLGLLGTVTGMIE 387
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCN 221
++ PK + I +L T+ G++++ +
Sbjct: 388 TFQAITIFGAGDPKNMAGGISAALVTTVQGLVVAIPVVL 426
>gi|194365174|ref|YP_002027784.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
gi|194347978|gb|ACF51101.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 220
Score = 45.3 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N ++ +++ +++ + +A+ + + P +G++G ++G+I+ +
Sbjct: 82 NRPRDQLRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGV 141
Query: 194 -SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 142 GDVNQLAGGIGKALVCTATGMIVA 165
>gi|149198900|ref|ZP_01875942.1| MotA/TolQ/ExbB proton channel [Lentisphaera araneosa HTCC2155]
gi|149138098|gb|EDM26509.1| MotA/TolQ/ExbB proton channel [Lentisphaera araneosa HTCC2155]
Length = 209
Score = 45.3 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 14/112 (12%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG- 199
E EI+ I E + ++ + +S P +G++G + G+I+ LSQS I
Sbjct: 97 ERYEEASITEINSIHKE----FGVLNALVKSAPLLGLLGTVAGMIQTFAALSQSGDITHV 152
Query: 200 -TAIGVSLTGTLLGIILSYSLCNPLTSQ------IKSTRLKQHRLYIIVKKA 244
I +L T LG++++ L S ++ + + +Y I K
Sbjct: 153 SQGISKALLTTQLGLLIA--LPGVFASAYLKRKFLRLSMELERLIYHIAKLG 202
>gi|308049133|ref|YP_003912699.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307631323|gb|ADN75625.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 435
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K + M P +G++G + G+I+ ++Q PK++ I ++L T+LG++
Sbjct: 335 EKGLSMLKLMAAIAPMLGLLGTVTGMIETFQVITQYGNGDPKVMAGGISMALVTTVLGLV 394
Query: 215 LSYSLCN 221
+ L
Sbjct: 395 AAMPLLL 401
>gi|293606239|ref|ZP_06688602.1| MotA/TolQ/ExbB proton channel family domain protein [Achromobacter
piechaudii ATCC 43553]
gi|292815386|gb|EFF74504.1| MotA/TolQ/ExbB proton channel family domain protein [Achromobacter
piechaudii ATCC 43553]
Length = 213
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---SQSPKI 197
E+ N++++ + ++ + AI + P +G+ G ++G+I+ G+ P
Sbjct: 89 EELRNVVEDTGRAVAHDLSRYIPAIGTIAVVAPLMGLFGTVVGMIEIFGSYTPGGGDPAQ 148
Query: 198 LGTAIGVSLTGTLLGIILS 216
L I ++L T GI+++
Sbjct: 149 LARGISIALYNTGFGILIA 167
>gi|299065873|emb|CBJ37052.1| biopolymer transport [Ralstonia solanacearum CMR15]
Length = 206
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGT 200
+ +++E + + + +A+ + P +G+ G ++G+I+ G+ +P+ L
Sbjct: 93 KEVVEEAGQNVSHRLERYLNALGTIASVAPLMGLFGTVIGMIEIFGSQTAAGTNPQALAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T LG++++
Sbjct: 153 GISVALYNTALGLVVA 168
>gi|158521749|ref|YP_001529619.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
gi|158510575|gb|ABW67542.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
Length = 576
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
G +EN + E I + + + + P +G++G + G+I+ +
Sbjct: 452 GQMDRESMENALQEAILNEVPRLERFLSTLGLLAAIAPLLGLLGTVTGMIQTFHVITYYG 511
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ ++L I +L T+LG+ ++ L
Sbjct: 512 TGDARMLSGGISEALVTTMLGLCVAIPLML 541
>gi|304409744|ref|ZP_07391364.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307304100|ref|ZP_07583853.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|304352262|gb|EFM16660.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306912998|gb|EFN43421.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 451
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L + + + + ++ +IA
Sbjct: 387 FGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAIVVARSKSIVQILEEQSAGIIA 443
>gi|241663983|ref|YP_002982343.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|309781425|ref|ZP_07676161.1| MotA/TolQ/ExbB proton channel family domain protein [Ralstonia sp.
5_7_47FAA]
gi|240866010|gb|ACS63671.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|308919838|gb|EFP65499.1| MotA/TolQ/ExbB proton channel family domain protein [Ralstonia sp.
5_7_47FAA]
Length = 206
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGT 200
+ +++E + + + +A+ + P +G+ G ++G+I+ G+ +P+ L
Sbjct: 93 KEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQALAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T LG++++
Sbjct: 153 GISVALYNTALGLVVA 168
>gi|167841252|ref|ZP_02467936.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 299
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Query: 105 YNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA 164
S+++ ++ + D R +I + I MD + K
Sbjct: 141 AQSSLYRLYRAGVDEIHSR--VDDNGRTVITTESIE-AIRASMDATLVRENQRLSKSMVL 197
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ P +G++G ++G++ + + + I +L T+ G+ ++
Sbjct: 198 LTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVTGLFVA 253
>gi|217973879|ref|YP_002358630.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|217499014|gb|ACK47207.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
Length = 451
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L + + + + ++ +IA
Sbjct: 387 FGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAIVVARSKSIVQILEEQSAGIIA 443
>gi|220932018|ref|YP_002508926.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
gi|219993328|gb|ACL69931.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
Length = 216
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----- 192
I+ ++ + + + K + + P +G++G ++GII + +
Sbjct: 88 EEPGRIKEVLQAVGEDEIKKMEKHLPILDVIATVSPLLGLLGTVMGIISSFNIMGAAAGA 147
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYS---LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+P + I +L T LG+I++ + +++++ + + I + + +
Sbjct: 148 ANPHQISAGIAEALISTALGLIIAIPTAVFYSYFANKVENKAHEMNLSMIDILEVV 203
>gi|166712275|ref|ZP_02243482.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 220
Score = 45.3 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
V I +++ +++ + +A+ + + P +G++G ++G+I+ +
Sbjct: 80 VRGRPRELIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDH 139
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 140 GVGDVNQLAGGIGKALVCTATGMIIA 165
>gi|114048025|ref|YP_738575.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|113889467|gb|ABI43518.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
Length = 451
Score = 45.3 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L + + + + ++ +IA
Sbjct: 387 FGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAIVVARSKSIVQVLEEQSAGIIA 443
>gi|90424486|ref|YP_532856.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90106500|gb|ABD88537.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 655
Score = 45.3 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 61/189 (32%), Gaps = 10/189 (5%)
Query: 36 IVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN 95
+V G + +M V+ D L I L + + L L+ ++ +
Sbjct: 420 VVIG--ILAIMMVISWIVMIDRVSYLNRIAKGNRLFLKHFRESATDLEGLLQFDREETDA 477
Query: 96 ETENHIDDPYNSTI----FTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEI 151
D + I + + F + ++ I ++D
Sbjct: 478 SIAGKSDTQDHKAIHSAPLHRLFHIGVQEIRRRFSANGGGPRLLSPQAIQSIRAVLDSGF 537
Query: 152 DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI----LGTAIGVSLT 207
K ++ P +G++G ++G++ ++ S + + I +L
Sbjct: 538 IHETQRLNKMMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALV 597
Query: 208 GTLLGIILS 216
T+ G+ ++
Sbjct: 598 ATVAGLAVA 606
>gi|332994434|gb|AEF04489.1| putative Tol protein [Alteromonas sp. SN2]
Length = 455
Score = 45.3 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+G S+L + ++ + YI++ G E I S I +
Sbjct: 256 TGGSILGLLVQAPNLKERVEQGGVVGYIILIVGAFGLLLAIERLI---TLSLIRMKVNKQ 312
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH---AISHMGESLP 173
L++ E+ T + + + ++E L + IL E K I + P
Sbjct: 313 LKSKEVKTNNPLGRVLKVRDEHPNADVEALELHLTEAILGEVPKLGRNLTIIKIISVVAP 372
Query: 174 AIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+G++G + G+I ++ PK++ I +L T+LG++++
Sbjct: 373 LMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTALVTTVLGLVVA 419
>gi|330830957|ref|YP_004393909.1| TolQ proton channel protein [Aeromonas veronii B565]
gi|328806093|gb|AEB51292.1| TolQ proton channel protein [Aeromonas veronii B565]
Length = 457
Score = 45.3 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E+ +DE I + + K I + P +G++G ++G+I + +
Sbjct: 331 GDNIEDLESKLDEIILRNVPKFEKGISLIKLIASVAPLLGLLGTVVGMIATFQAITLFGT 390
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQ 234
PK++ I +L T+ G++++ Y++ + ++ +Q
Sbjct: 391 GDPKLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLEEQ 438
>gi|332534952|ref|ZP_08410771.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332035625|gb|EGI72116.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 454
Score = 45.3 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
N +E +DE I + I + P +G++G ++G+I + +
Sbjct: 333 NQDVENLELKLDEAILRETPRIEAGINIIKILAAIAPLLGLLGTVIGMILTFQTITLFGT 392
Query: 193 QSPKILGTAIGVSLTGTLLG 212
PKI+ I ++L T LG
Sbjct: 393 GDPKIMAGNISLALVTTALG 412
>gi|311107322|ref|YP_003980175.1| MotA/TolQ/ExbB proton channel family protein 3 [Achromobacter
xylosoxidans A8]
gi|310762011|gb|ADP17460.1| MotA/TolQ/ExbB proton channel family protein 3 [Achromobacter
xylosoxidans A8]
Length = 207
Score = 44.9 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 51 LKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN------ETENHIDDP 104
L +++++G + + LG L L++ +L++G + + +
Sbjct: 2 LSILREAGWPIWPLLATSVLG-------LALIFERFLSLRRGLVMPRGLSDQVAEMLRNR 54
Query: 105 YNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA 164
++ SI + N+ L + D MR + E+ N++++ + ++ + A
Sbjct: 55 QDTP--ESINRLERNSPLGRILADVMRH---RHLPREELRNVVEDTGRAVAHDLSRYIPA 109
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL---SQSPKILGTAIGVSLTGTLLGIILS 216
I + P +G+ G ++G+I+ G+ P L I ++L T GI+++
Sbjct: 110 IGTIAVVAPLMGLFGTVVGMIEIFGSYTPGGGDPAQLARGISMALYNTGFGILIA 164
>gi|212635977|ref|YP_002312502.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212557461|gb|ACJ29915.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 451
Score = 44.9 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 140 SYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E L + + IL E I + P +G++G + G+I ++ +
Sbjct: 330 DVDVETLELKLDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGT 389
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
PK++ I ++L T+ G++ + L + + + + ++ ++A
Sbjct: 390 GDPKLMAGGISMALMTTVQGLVAALPLML-MHAVVIARSKSIVQVLEEQSAGIVAS 444
>gi|114563791|ref|YP_751304.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
gi|114335084|gb|ABI72466.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 451
Score = 44.9 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 140 SYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E L + + IL E I + P +G++G + G+I ++ +
Sbjct: 330 DVDVETLELKLDEAILKETPALEARISIIKVIAAIAPMMGLLGTVTGMIATFQSIQLFGT 389
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
PK++ I ++L T+ G+I + L L + + + ++ +IA
Sbjct: 390 GDPKLMAGGISMALITTVQGLIAALPLML-LHAIVVARSKSIVQVLEEQSAGIIA 443
>gi|86135944|ref|ZP_01054523.1| MotA/TolQ/ExbB proton channel family protein [Roseobacter sp.
MED193]
gi|85826818|gb|EAQ47014.1| MotA/TolQ/ExbB proton channel family protein [Roseobacter sp.
MED193]
Length = 220
Score = 44.9 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+ + ++ E+ +D E + + + A+ + + P +G+ G ++G+I+A L
Sbjct: 83 MALSAPQTAELSARVDAEAETRFAQLERGLGALDMVAQLAPLMGLFGTVIGMIEAFQKLQ 142
Query: 192 ----SQSPKILGTAIGVSLTGTLLGIILS 216
S P +L I V+L T G+ ++
Sbjct: 143 SAGSSVDPSLLAGGIWVALLTTAAGLAVA 171
>gi|171911363|ref|ZP_02926833.1| hypothetical protein VspiD_09315 [Verrucomicrobium spinosum DSM
4136]
Length = 463
Score = 44.9 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 112 SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES 171
++P L ++ + I + + V ++ ++M + I Y + +
Sbjct: 192 NMPVRLRDSLMVNRIRKALELFEVRQNTP-DVGSMMSSQSSIDGARIGGSYIMLKAFLWA 250
Query: 172 LPAIGIVGAILGIIKAMG-----NLSQSPKILG------TAIGVSLTGTLLGIILSYSLC 220
+P +G +G ++G+ A+G N+ I+G + +G + TLLG++L+ L
Sbjct: 251 IPLMGFIGTVIGLSHAIGGMSFANMDDVSAIVGSISAVTSGLGTAFDATLLGLVLAVFLN 310
Query: 221 NPLTSQIKSTRLK 233
P+ + + +
Sbjct: 311 FPM-NALAKNEDE 322
>gi|213025492|ref|ZP_03339939.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 41
Score = 44.9 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
LMDEEI+ E P ++++ +G+SLPA GIV A++G++
Sbjct: 1 ALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAVMGVV 41
>gi|294788257|ref|ZP_06753500.1| biopolymer transport protein ExbB [Simonsiella muelleri ATCC 29453]
gi|294483688|gb|EFG31372.1| biopolymer transport protein ExbB [Simonsiella muelleri ATCC 29453]
Length = 219
Score = 44.9 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
+M+ +S +E + + I++ ++ +G + P IG++G + GI A+
Sbjct: 93 KMLSANLPKSDFLEREIRHSMTKIMHRYDAGLSVLASVGSTAPFIGLLGTVWGIYHALEG 152
Query: 191 LSQ----SPKILGTAIGVSLTGTLLGIILS 216
+S+ S + IG +L T +G+ ++
Sbjct: 153 ISKAGQMSIAAVAGPIGEALVSTAVGLFVA 182
>gi|292493724|ref|YP_003529163.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582319|gb|ADE16776.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 477
Score = 44.9 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 54/134 (40%), Gaps = 5/134 (3%)
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
E + + + + + +DE I + + ++ + P +G+
Sbjct: 328 ETPQDNNPLGRILGVYKDNGQDVETLHLKLDEAILKEIPRLERGLPTLAILAAIPPLLGL 387
Query: 178 VGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+G + G+I+ ++ + PK++ I +L T LG+ ++ + + S + S +
Sbjct: 388 LGTVTGMIETFQSITLFGTGDPKLMSGGISEALVTTELGLSVAIPILL-IHSGLSSKSNR 446
Query: 234 QHRLYIIVKKALIA 247
++ A++A
Sbjct: 447 LVQVLDEESAAIVA 460
>gi|157962472|ref|YP_001502506.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157847472|gb|ABV87971.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 451
Score = 44.9 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 68/191 (35%), Gaps = 5/191 (2%)
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
LL IF KA ++ + YI+M L G+ E + + L+N
Sbjct: 254 LLNIFTQKATIEERIEAGGTIGYIIMALLALGALISIERLVTLGVVGAKVKAQRKNLDNP 313
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +E +DE I I + P +G++G
Sbjct: 314 GNNALGRVLKAYQDNKDVDVETLELKLDEAILKETPALETRISIIKVLAAIAPMMGLLGT 373
Query: 181 ILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
+ G+I ++ + PK++ I ++L T+ G++ + L + + + + +
Sbjct: 374 VTGMIATFQSIQLFGTGDPKLMAGGISMALMTTVQGLVAALPLML-MHAVVIARSKSIVQ 432
Query: 237 LYIIVKKALIA 247
+ ++A
Sbjct: 433 VLEEQSAGIVA 443
>gi|319763307|ref|YP_004127244.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330825502|ref|YP_004388805.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
gi|317117868|gb|ADV00357.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329310874|gb|AEB85289.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
Length = 212
Score = 44.9 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 60/153 (39%), Gaps = 15/153 (9%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE----NNELTTFICDYMRMII 134
L L++ LK + + S+ P V+ N+ L + +R +
Sbjct: 23 LALVFERFMALKTARVAPPKLLDEAISVSSRAVPAPDVVAQLEQNSALGEVLASGLRALN 82
Query: 135 VG-NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN--- 190
+ ++ M+ + + K A++ + + P +G++G ++G+I+ G+
Sbjct: 83 GNPQSSEADLRAAMEGAGRKVAHRLEKYLTALATIASAAPLLGLLGTVIGMIEIFGSQAG 142
Query: 191 -------LSQSPKILGTAIGVSLTGTLLGIILS 216
+P L I ++L T G+I++
Sbjct: 143 TGAVGATGGGNPAQLAHGISIALYNTAFGLIIA 175
>gi|294624866|ref|ZP_06703523.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600825|gb|EFF44905.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 183
Score = 44.9 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA-MGNLS- 192
V I +++ +++ + +A+ + + P +G++G ++G+I+ MG L
Sbjct: 43 VRGRPRDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDH 102
Query: 193 --QSPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 103 GVGDVNQLAGGIGKALVCTATGMIIA 128
>gi|254786071|ref|YP_003073500.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
gi|237686543|gb|ACR13807.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
Length = 170
Score = 44.9 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGI 213
LK I + LP G++G + G+I+ + S +P+ + + + T+ G+
Sbjct: 80 MLKNLKMIPTLIALLPMFGLLGTVTGMIQVFDVMAFMGSGNPRAMANGVSAATIPTMAGM 139
Query: 214 ILSYSLCNPLTSQIKSTRLKQHRLY 238
+++ + P + + ++ RL
Sbjct: 140 VVA-LIAIPFATGLDRRYKRELRLL 163
>gi|294665029|ref|ZP_06730336.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605186|gb|EFF48530.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 183
Score = 44.9 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA-MGNLS- 192
V I +++ +++ + +A+ + + P +G++G ++G+I+ MG L
Sbjct: 43 VRGRPRDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDH 102
Query: 193 --QSPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 103 GVGDVNQLAGGIGKALVCTATGMIIA 128
>gi|206593901|emb|CAQ60828.1| putative biopolymer transport exbb-like (partial sequence)
transmembrane protein [Ralstonia solanacearum IPO1609]
Length = 347
Score = 44.9 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGTAIGVSLTGTLLG 212
+ + +A+ + P +G+ G ++G+I+ G+ +P+ L I V+L T LG
Sbjct: 246 HRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYNTALG 305
Query: 213 IILS 216
++++
Sbjct: 306 LVVA 309
>gi|109897386|ref|YP_660641.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109699667|gb|ABG39587.1| outer membrane transport energization protein ExbB
[Pseudoalteromonas atlantica T6c]
Length = 469
Score = 44.9 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 76/198 (38%), Gaps = 11/198 (5%)
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTV 116
+G S+L++ ++ + YI++ G E I + I T +
Sbjct: 262 TGGSILKLLVQAPSLKERVEQGGLVGYIILIVGAIGLLLALERLI---TLTVIKTKVNKQ 318
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH---AISHMGESLP 173
L+++ T+ M + + E+L + IL E K I + P
Sbjct: 319 LKSDTFTSNNPLGRVMQVRDKYPQADTESLELHLTEAILGEIPKLSRNLTIIKIISVVAP 378
Query: 174 AIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
+G++G + G+I ++ PK++ I +L T+LG++++ + L + + +
Sbjct: 379 LMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTALVTTVLGLVVAIPMTL-LYAMLNT 437
Query: 230 TRLKQHRLYIIVKKALIA 247
+ +IA
Sbjct: 438 RSKDVVFILQEQASGVIA 455
>gi|171059234|ref|YP_001791583.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170776679|gb|ACB34818.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 192
Score = 44.9 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 115 TVLENNELTTFICDYMRMII-VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
+ +N+ L + + +R ++ + +++ + +A+ + + P
Sbjct: 49 KLADNSVLGSVLAAGIRSATPSRGTNEAQLRKAFESAGRAAVHKLERYLNALGTIASAAP 108
Query: 174 AIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+G++G ++G+I+ G S +P++L I V+L T G+I++
Sbjct: 109 LLGLLGTVVGMIEIFGAQSPTSGSNPEMLAHGISVALYNTAFGLIIA 155
>gi|299139859|ref|ZP_07033031.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
gi|298598213|gb|EFI54379.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
Length = 249
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 136 GNARSYEIEN---LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
G ++E+ ++ I + K ++ +G + P IG+ G ++GI+ A ++
Sbjct: 124 GAITPEQVESSKRALERAESITHAKLKKGLSGLATIGSTAPFIGLFGTVIGILNAFRSIA 183
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
S + I +L T G++++
Sbjct: 184 SSKSSGIGQVAGGISEALVTTAFGLLVAIPAVMCF 218
>gi|226227416|ref|YP_002761522.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
gi|226090607|dbj|BAH39052.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
Length = 241
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 18/150 (12%)
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E+ I D + N+ +E M + + + ++ +G + P +G+VG
Sbjct: 87 EIRPLIQDGSVTVADINSAERAVEREMLMTV----VDLKRGLGVLATVGATAPFVGLVGT 142
Query: 181 ILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSL---CNPLTSQIKSTRLK 233
+GI+ + +S + I +L T +GI ++ N ++I + +
Sbjct: 143 TMGIVNSFTAMSTSGAGGISSMAAGIAEALITTAIGIGVAIPAVWGFNYFQTKIDNLTAE 202
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEYGRK 263
+ LI ++G E+GR
Sbjct: 203 MTYTSKEMIDYLIKGVSG-------EFGRS 225
>gi|254525423|ref|ZP_05137475.1| MotA/TolQ/ExbB proton channel [Prochlorococcus marinus str. MIT
9202]
gi|221536847|gb|EEE39300.1| MotA/TolQ/ExbB proton channel [Prochlorococcus marinus str. MIT
9202]
Length = 203
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 110 FTSIPTVLENNELTTFICDYMRMIIV----GNARSYEIENLMDEEIDIILYEKLKPYHAI 165
F+++ + ++ Y ++++ + + + I YE K +
Sbjct: 51 FSNLENLPQSKNKNDLYNPYKKLLLKVKEFNLNNQKNLSIALAISLQSIQYEFDKFNNFF 110
Query: 166 SHMGESLPAIGIVGAILGIIKAM-----GNLSQSPKILGTAIGVSLTGTLLGIILSYSLC 220
S P +G++G + G+I + GN+ + + + I +L T G+I++
Sbjct: 111 STTIAISPLLGLLGTVFGLINSFSFIDIGNIGVNAEEVTGGISEALISTAAGLIIA-IFT 169
Query: 221 NPLTSQIKSTRLKQHRLY 238
++ K+ R KQ R+
Sbjct: 170 LIFSNYFKAIRNKQLRIM 187
>gi|254483016|ref|ZP_05096251.1| transporter, MotA/TolQ/ExbB proton channel family protein [marine
gamma proteobacterium HTCC2148]
gi|214036701|gb|EEB77373.1| transporter, MotA/TolQ/ExbB proton channel family protein [marine
gamma proteobacterium HTCC2148]
Length = 450
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----Q 193
++ +DE + + + I + P +G++G + G+I +S
Sbjct: 330 EDDELVQLKLDEAVLAEIPALERGNGLIKLFAATSPLLGLLGTVTGMILTFQAISLFGTG 389
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
PK++ I +L T+LG++++
Sbjct: 390 DPKLMAGGISQALMTTVLGLVVA 412
>gi|192360816|ref|YP_001981090.1| TolR [Cellvibrio japonicus Ueda107]
gi|190686981|gb|ACE84659.1| TolR [Cellvibrio japonicus Ueda107]
Length = 458
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAI 202
+DE I L E K I M P +G++G + G+I + + PK++ I
Sbjct: 344 LDEVIFKDLAELRKGLSTIKVMAAIAPLMGLLGTVTGMIGTFQAITLFGTGDPKLMAGGI 403
Query: 203 GVSLTGTLLGIILSYSLCN 221
+L T+ G++++ L
Sbjct: 404 SQALVTTVQGLVVAIPLLL 422
>gi|90021706|ref|YP_527533.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
gi|89951306|gb|ABD81321.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 209
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + S +M + I +++E K A+ + P +G++G ++G+IK
Sbjct: 73 RILAAGLSNSRHGREVMKDSIQEAANQVVHELEKFLGALGTIAAIAPLLGLLGTVIGMIK 132
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
L+ + L I +L T +G+ ++
Sbjct: 133 VFTALNLEGATNAAPLAGGISEALVTTAVGLFVA 166
>gi|224826272|ref|ZP_03699374.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224601373|gb|EEG07554.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 209
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R+ G + +M E I+ ++ ++ + + + P +G++G ++G+I+
Sbjct: 74 RLFAAGLRNADASREVMKESIEDEGRLVAHQLERYLTTLGTIAAMAPLLGLLGTVIGMIE 133
Query: 187 AMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
G+ +P L I V+L T G+I++
Sbjct: 134 IFGSQAPSGTNPTELAHGISVALYNTAFGLIVA 166
>gi|160899009|ref|YP_001564591.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160364593|gb|ABX36206.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 210
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----- 191
++ E+ M+ + K A++ + + P +G++G ++G+I+ G+
Sbjct: 86 DSSEEELRASMEGAGRAAAHTLEKHLSALATIASAAPLLGLLGTVIGMIEIFGSQGGASA 145
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILS 216
+P L I ++L T G+I++
Sbjct: 146 TGGGNPAQLAAGISIALYNTAFGLIVA 172
>gi|301629304|ref|XP_002943783.1| PREDICTED: protein tolQ-like [Xenopus (Silurana) tropicalis]
Length = 164
Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM-------- 188
+ ++ M+ + + K +A++ + + P +G++G ++G+I+
Sbjct: 39 QSTEADLRAAMEGAGRTVAHRLEKYLNALATIASAAPLLGLLGTVIGMIEIFGSQSGGGG 98
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILS 216
S +P L I +L T G+I++
Sbjct: 99 AIGSGNPAQLAHGISTALYNTAFGLIVA 126
>gi|300703205|ref|YP_003744807.1| biopolymer transport [Ralstonia solanacearum CFBP2957]
gi|299070868|emb|CBJ42170.1| biopolymer transport [Ralstonia solanacearum CFBP2957]
Length = 206
Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGT 200
+ +++E + + + +A+ + P +G+ G ++G+I+ G+ +P+ L
Sbjct: 93 KEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T LG++++
Sbjct: 153 GISVALYNTALGLVVA 168
>gi|207721748|ref|YP_002252187.1| biopolymer transport exbb-like protein [Ralstonia solanacearum
MolK2]
gi|206586912|emb|CAQ17497.1| biopolymer transport exbb-like protein [Ralstonia solanacearum
MolK2]
Length = 206
Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGT 200
+ +++E + + + +A+ + P +G+ G ++G+I+ G+ +P+ L
Sbjct: 93 KEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T LG++++
Sbjct: 153 GISVALYNTALGLVVA 168
>gi|83749962|ref|ZP_00946915.1| TolQ protein [Ralstonia solanacearum UW551]
gi|83723365|gb|EAP70590.1| TolQ protein [Ralstonia solanacearum UW551]
Length = 206
Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGT 200
+ +++E + + + +A+ + P +G+ G ++G+I+ G+ +P+ L
Sbjct: 93 KEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T LG++++
Sbjct: 153 GISVALYNTALGLVVA 168
>gi|300690600|ref|YP_003751595.1| biopolymer transport [Ralstonia solanacearum PSI07]
gi|299077660|emb|CBJ50296.1| biopolymer transport [Ralstonia solanacearum PSI07]
Length = 206
Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGT 200
+ +++E + + + +A+ + P +G+ G ++G+I+ G+ +P+ L
Sbjct: 93 KEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T LG++++
Sbjct: 153 GISVALYNTALGLVVA 168
>gi|282859643|ref|ZP_06268745.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella bivia JCVIHMP010]
gi|282587561|gb|EFB92764.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella bivia JCVIHMP010]
Length = 281
Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N IE + + K I+ P++G +G ++G++ A + Q
Sbjct: 160 NDSIENIERSVTSYGSVQSSNLEKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQQVGD 219
Query: 194 -SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+P I+ + V+L T+ GII++ L + ++ V L A M
Sbjct: 220 INPTIVAAGMKVALITTIFGIIVALVLMIFYNYILSKIEHITAQMEESVITLLDAIME 277
>gi|294141736|ref|YP_003557714.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
gi|293328205|dbj|BAJ02936.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
Length = 451
Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 140 SYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E L + + IL E I + P +G++G + G+I ++ +
Sbjct: 330 DVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGT 389
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
PK++ I ++L T+ G++ + L + + + + ++ ++A
Sbjct: 390 SDPKLMAGGISMALMTTVQGLVAALPLML-MHAIVVARSKSIVQVLEEQSAGMVAS 444
>gi|53802337|ref|YP_112966.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53756098|gb|AAU90389.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 403
Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
+R+ + +DE + + + + P +G++G + G+I+
Sbjct: 261 LRLEQAQTEDEDALYLTVDEALAGERMRLERALGLLKLVAAIAPMLGLLGTVTGMIRTFQ 320
Query: 190 NL----SQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ S P+++ I +L T+ G++ + +
Sbjct: 321 AIALHGSGDPRLMSGGISEALVTTVEGLVTAIPILL 356
>gi|260429238|ref|ZP_05783215.1| protein TolQ [Citreicella sp. SE45]
gi|260419861|gb|EEX13114.1| protein TolQ [Citreicella sp. SE45]
Length = 231
Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----I 197
I+ MD I E + ++ + + P +G+ G + GI+ A ++ +
Sbjct: 115 RIDRSMDVAIQKESEELQRGLPVLATVASAAPFVGLFGTVWGIMHAFIEIANQQDTSLVV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T LG++ + +++ + + Y
Sbjct: 175 VAPGIAEALFATALGLVAAIPAVI-FYNKLSADANRVIAGYE 215
>gi|330814397|ref|YP_004358636.1| motA/TolQ/ExbB proton channel family protein [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487492|gb|AEA81897.1| motA/TolQ/ExbB proton channel family protein [Candidatus
Pelagibacter sp. IMCC9063]
Length = 222
Score = 44.5 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
+ +MD ID + + K ++ +G P +G+ G + GI+ + ++ + S
Sbjct: 111 ERTKRVMDVAIDKQIEKYEKNLTFLATVGSVAPFVGLFGTVWGIMNSFQSIAISRNTSLA 170
Query: 197 ILGTAIGVSLTGTLLGIILS 216
I+ I +L T LG++ +
Sbjct: 171 IVAPGIAEALFATALGLLAA 190
>gi|17547247|ref|NP_520649.1| biopolymer transport EXBB-like transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|17429549|emb|CAD16235.1| probable biopolymer transport exbb-like transmembrane protein
[Ralstonia solanacearum GMI1000]
Length = 206
Score = 44.5 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGT 200
+ +++E + + + +A+ + P +G+ G ++G+I+ G+ +P+ L
Sbjct: 93 KEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T LG++++
Sbjct: 153 GISVALYNTALGLVVA 168
>gi|83954257|ref|ZP_00962977.1| MotA/TolQ/ExbB proton channel family protein [Sulfitobacter sp.
NAS-14.1]
gi|83841294|gb|EAP80464.1| MotA/TolQ/ExbB proton channel family protein [Sulfitobacter sp.
NAS-14.1]
Length = 230
Score = 44.5 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILG 199
+ E + + + + + + P +G+ G +LG+I+A +L P IL
Sbjct: 100 ERLQAEAETRFAKLETGFRLLDSVAQLAPLLGLFGTVLGMIEAFRSLQAAGSQVDPSILA 159
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
I V+L T +G++++ P + + +I KA++ +N
Sbjct: 160 GGIWVALLTTAVGLVVA----MPTALILSWLEQRMEAERVIADKAILTVLN 206
>gi|332534323|ref|ZP_08410166.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036233|gb|EGI72706.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 441
Score = 44.5 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
AI+ P +G++G + G+I+ + S P+++ I +L T LG++++
Sbjct: 347 AIAVTAAVAPLLGLLGTVSGMIETFKMMTLFGSGDPEVVSGGIAQALITTELGLVVA 403
>gi|317407684|gb|EFV87619.1| biopolymer transporter [Achromobacter xylosoxidans C54]
Length = 208
Score = 44.5 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---SQSPKI 197
E+ +++++ + ++ + AI + P +G+ G ++G+I+ G+ P
Sbjct: 89 EELRSVVEDTGRAVAHDLSRYIPAIGTIAVVAPLMGLFGTVVGMIEIFGSYTPEGGDPAQ 148
Query: 198 LGTAIGVSLTGTLLGIILS 216
L I ++L T GI+++
Sbjct: 149 LARGISIALYNTGFGILIA 167
>gi|240851192|ref|YP_002972595.1| biopolymer transport protein ExbB [Bartonella grahamii as4aup]
gi|240268315|gb|ACS51903.1| biopolymer transport protein ExbB [Bartonella grahamii as4aup]
Length = 294
Score = 44.5 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 62/179 (34%), Gaps = 21/179 (11%)
Query: 47 MANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYIL-----MYNLKKGSRNETENHI 101
+A LK K +G +F K + ++ Y ++ + + ++ E+ I
Sbjct: 81 LAASLKESKGAG-----VFFLKEVLKEVYLSTQQVHFSAPEGINKSSGERTGARESAQTI 135
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
+D V + R V + +L+ +
Sbjct: 136 EDILFYEESNQYEDVSRDVRDV-------RARDVHEGLKERVHSLLSRCLLAATRRVACG 188
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
++ +G P +G+ + GI+ + ++QS ++ I +L T +G+ ++
Sbjct: 189 STVLATIGAIAPFVGLFATVWGIMNSFIGIAQSQTTRLDVVAPGIAEALFATAIGLFVA 247
>gi|91205080|ref|YP_537435.1| hypothetical protein RBE_0265 [Rickettsia bellii RML369-C]
gi|157827583|ref|YP_001496647.1| hypothetical protein A1I_06470 [Rickettsia bellii OSU 85-389]
gi|91068624|gb|ABE04346.1| TolQ [Rickettsia bellii RML369-C]
gi|157802887|gb|ABV79610.1| TolQ [Rickettsia bellii OSU 85-389]
Length = 241
Score = 44.5 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 24/173 (13%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY--CDVLKLLYILMYNLKKGSRNETENHIDDPYNS 107
+I D L+++ ++T+ VL+ LY + D S
Sbjct: 46 SWAIILDKVFKLMQVQRKMRAFENTFWSGGVLEQLYDSIKRSVNNPLALIFVSAMDECKS 105
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH 167
+P +L+NN I N M + + + K ++
Sbjct: 106 INTKGLPELLKNNHK------------------ERITNSMYLAQNREIEKLEKNLSFLAT 147
Query: 168 MGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+G S P IG+ G + GI+ + ++ + S ++ I +L T +G+ +
Sbjct: 148 VGSSSPFIGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAA 200
>gi|254502321|ref|ZP_05114472.1| protein TolQ [Labrenzia alexandrii DFL-11]
gi|222438392|gb|EEE45071.1| protein TolQ [Labrenzia alexandrii DFL-11]
Length = 235
Score = 44.5 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ +MD I ++ +G S P IG+ G + GI+ A + S +
Sbjct: 115 QQRIDRVMDVTIQREQERLENRLLILATVGSSAPFIGLFGTVWGIMTAFQAIAASESTNL 174
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 175 AVVAPGIAEALFATALGLLAA 195
>gi|325920378|ref|ZP_08182309.1| biopolymer transport protein [Xanthomonas gardneri ATCC 19865]
gi|325549125|gb|EGD20048.1| biopolymer transport protein [Xanthomonas gardneri ATCC 19865]
Length = 220
Score = 44.5 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA-MGNLS- 192
V I +++ +++ + +A+ + + P +G++G ++G+I+ MG L
Sbjct: 80 VRGRPRELIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDH 139
Query: 193 --QSPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 140 GVGDVNQLAGGIGKALVCTATGMIIA 165
>gi|114569420|ref|YP_756100.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
gi|114339882|gb|ABI65162.1| outer membrane transport energization protein ExbB [Maricaulis
maris MCS10]
Length = 462
Score = 44.5 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
M+ A+ ++E + + + IL E + + P +G++G + G+IK
Sbjct: 332 MLAYEGAKDKDVETMELKLDEAILQETPKLEFGLNFLKLAAGIAPLLGLLGTVTGMIKTF 391
Query: 189 GNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + P+I+ I +L T+LG+I +
Sbjct: 392 TQITLFGTGDPRIMAGGISEALMTTVLGLIAA 423
>gi|78777598|ref|YP_393913.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
gi|78498138|gb|ABB44678.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
Length = 188
Score = 44.5 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 53/151 (35%), Gaps = 14/151 (9%)
Query: 100 HIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKL 159
I++ ++ V + L F+ + S ++++ + E
Sbjct: 46 EIENRSLESLLMGASVVSPQSYLNNFLR----------SSSNINKDILSLGLQAATKEAT 95
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP---KILGTAIGVSLTGTLLGIILS 216
K +S + P IG+ G ++ I+ ++ QS ++ + +L T GI ++
Sbjct: 96 KGLSVLSVFASTTPFIGLFGTVVSILDTFTHIGQSSGGMSVIAAGVSDALVATAAGIFVA 155
Query: 217 YSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+K + + A++A
Sbjct: 156 -IFSYTYHQILKRKSFELISFLEMQSDAILA 185
>gi|88857887|ref|ZP_01132529.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
tunicata D2]
gi|88819504|gb|EAR29317.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
tunicata D2]
Length = 454
Score = 44.5 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
N +E +DE I + I P +G++G ++G+I + +
Sbjct: 333 NQDVENLELKLDEAILRETPRIEAGINIIKIFAAIAPLLGLLGTVVGMIDTFQQITLFGT 392
Query: 193 QSPKILGTAIGVSLTGTLLG 212
PKI+ +I ++L T LG
Sbjct: 393 GDPKIMAGSISMALVTTALG 412
>gi|300115031|ref|YP_003761606.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299540968|gb|ADJ29285.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 481
Score = 44.5 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLC 220
++ + P +G++G + G+I+ ++ + PK++ I +L T LG+ ++ +
Sbjct: 375 LAILAAIAPLLGLLGTVTGMIETFQSITLFGTGDPKLMSGGISQALVTTELGLAVAIPVL 434
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEY 260
+ S + S + ++ A++A ++A E
Sbjct: 435 L-IHSSLSSKSNRLVQVLDEESAAIVA-------RLAEEK 466
>gi|319786919|ref|YP_004146394.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
gi|317465431|gb|ADV27163.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
Length = 220
Score = 44.5 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
V I +++ +++ + +A+ + + P +G++G ++G+I+ +
Sbjct: 80 VRQRPRELIRERLEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDH 139
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 140 GLGDVNQLAGGIGKALVCTATGMIVA 165
>gi|21242824|ref|NP_642406.1| biopolymer transport protein [Xanthomonas axonopodis pv. citri str.
306]
gi|21108311|gb|AAM36942.1| biopolymer transport protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 220
Score = 44.5 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA-MGNLS- 192
V I +++ +++ + +A+ + + P +G++G ++G+I+ MG L
Sbjct: 80 VRGRPRDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDH 139
Query: 193 --QSPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 140 GVGDVNQLAGGIGKALVCTATGMIIA 165
>gi|327399148|ref|YP_004340017.1| MotA/TolQ/ExbB proton channel [Hippea maritima DSM 10411]
gi|327181777|gb|AEA33958.1| MotA/TolQ/ExbB proton channel [Hippea maritima DSM 10411]
Length = 191
Score = 44.5 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 152 DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLT 207
++I E + ++ +G + P +G+ G + GII A N+ + + I +L
Sbjct: 93 EMIARELEGGFPWLASVGATAPFVGLFGTVWGIINAFNNIGNVQSVTIATVAPGISEALI 152
Query: 208 GTLLGIILS 216
T GI ++
Sbjct: 153 TTAAGIFVA 161
>gi|319792735|ref|YP_004154375.1| mota/tolq/exbb proton channel [Variovorax paradoxus EPS]
gi|315595198|gb|ADU36264.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus EPS]
Length = 238
Score = 44.1 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 18/180 (10%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
+ ++ L V L++ YK L +++ + N+
Sbjct: 20 AVAVLLIGMSLASWIVIIVKALDVIKYKRLAKNSQ-------DFWHSEDFATALNKLGKD 72
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
+P+ + + + D + S I + ID
Sbjct: 73 DSNPFRALALEGREAAAHHRNTKAHLHDAL-------DVSDWITRALRNGIDAFTARLQT 125
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI A+ ++ + + IG +L T LG+ ++
Sbjct: 126 GLAILASVGSTAPFIGLFGTVWGIYHALMSIGSAGQATIDKVAGPIGEALIMTALGLAVA 185
>gi|157374711|ref|YP_001473311.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
gi|157317085|gb|ABV36183.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 451
Score = 44.1 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 140 SYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E L + + IL E I + P +G++G + G+I ++ +
Sbjct: 330 DVDVETLELKLDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGT 389
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
PK++ I ++L T+ G++ + L + + + + ++ ++A
Sbjct: 390 GDPKLMAGGISMALMTTVQGLVAALPLML-MHAVVIARSKSIVQVLEEQSAGIVAS 444
>gi|315123542|ref|YP_004065548.1| putative Tol protein [Pseudoalteromonas sp. SM9913]
gi|315017302|gb|ADT70639.1| putative Tol protein [Pseudoalteromonas sp. SM9913]
Length = 455
Score = 44.1 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEI-DIILYEKLKPYHAIS---HMGESLPAIGIVGAILGIIK 186
R++ V + + ++ ++ + IL E K ++ + P +G++G + G+I
Sbjct: 325 RVMKVKDQYPNVAYDTLELKLSEAILREMPKITRNLTLIKIISVVAPLLGLLGTVTGMIN 384
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ PK++ I +L T+LG++++
Sbjct: 385 TFQAITLFGTGDPKLMAGGISQALVTTVLGLVVA 418
>gi|163733518|ref|ZP_02140961.1| putative proton transporter TolQ [Roseobacter litoralis Och 149]
gi|161393306|gb|EDQ17632.1| putative proton transporter TolQ [Roseobacter litoralis Och 149]
Length = 231
Score = 44.1 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
I+ MD I+ ++ +G S P IG+ G ++GI+ A +++ +
Sbjct: 114 QRIDRSMDVAINKESEHLRDGLTVLATIGSSTPFIGLFGTVIGIMNAFIEIAEQQNTNLA 173
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++ I +L T LG+ + +++ + + Y
Sbjct: 174 VVAPGIAEALLATGLGLFAAIPAVI-YYNKLSADADRILAGYE 215
>gi|148244109|ref|YP_001220345.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|146400672|gb|ABQ29203.1| outer membrane transport energization protein ExbB [Acidiphilium
cryptum JF-5]
Length = 221
Score = 44.1 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+ +A + + MDE I ++ + + + P +G+ G I+G+ A L+
Sbjct: 86 MNDADHAGMNSRMDEAIMLVAPRLDRRMWVLDTIVTLAPLLGLFGTIIGMFHAFSILATP 145
Query: 195 ---PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
P + + +L T GI ++ + + +++ ++ ++ +G
Sbjct: 146 GHAPAEVTGGVADALVATACGIFIA-MIGLATFNMLQNQVRLIIHQLETIRTMVLNRTDG 204
Query: 252 AI 253
A
Sbjct: 205 AP 206
>gi|148264653|ref|YP_001231359.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146398153|gb|ABQ26786.1| outer membrane transport energization protein ExbB [Geobacter
uraniireducens Rf4]
Length = 598
Score = 44.1 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 64/185 (34%), Gaps = 21/185 (11%)
Query: 37 VAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE 96
V G G ++A V ++L +I + ++
Sbjct: 390 VIGLCTGMLLLAT--YVFVRKFIALQKITKGNHAFLAIFGEL-------------DDPLA 434
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
+ +S+++ + + + + + A +E +D
Sbjct: 435 LHEEEEAFQHSSLWRIYCAGYDEVQRCLERANSSKKNALSRASLNYVEAALD-RASTNET 493
Query: 157 EKLKPYHAISHMG-ESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLL 211
+KL + + +G P G++G + G++ +L++S + + + +L TL
Sbjct: 494 KKLNGWMMVLTLGISGGPFWGLLGTVWGVMNTFASLAESGEASLAAIAPGVASALACTLF 553
Query: 212 GIILS 216
G++++
Sbjct: 554 GLLVA 558
>gi|124514215|gb|EAY55730.1| putative MotA/TolQ/ExbB proton channel [Leptospirillum rubarum]
gi|206602335|gb|EDZ38816.1| Putative MotA/TolQ/ExbB proton channel [Leptospirillum sp. Group II
'5-way CG']
Length = 223
Score = 44.1 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYH---AISHMGESLPAIGIVGAILGIIKAM 188
M+ G + +++ + + E+ + ++ P +G++G + GII A
Sbjct: 93 MVAGGKSSEMDLDVIHRTLLQASQEEQARLEAYLPVLATTANIAPFVGLLGTVWGIIHAF 152
Query: 189 GNLSQSPKI----LGTAIGVSLTGTLLGIILS 216
++S + I +L T G+ +
Sbjct: 153 RDISHQASASIASVAPGIADALVTTAAGLFTA 184
>gi|163745822|ref|ZP_02153181.1| MotA/TolQ/ExbB proton channel [Oceanibulbus indolifex HEL-45]
gi|161380567|gb|EDQ04977.1| MotA/TolQ/ExbB proton channel [Oceanibulbus indolifex HEL-45]
Length = 231
Score = 44.1 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ MD I K ++ +G + P +G+ G + GI+ + + + + +
Sbjct: 115 RIDRSMDVAISKEAERLQKGLPVLATVGSTAPFVGLFGTVFGIMNSFIEIAAQQNTNLAV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T +G++ + +++ + + Y
Sbjct: 175 VAPGIAEALLATGIGLLAAIPAVV-FYNKLSADSDRILGNYE 215
>gi|78047808|ref|YP_363983.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036238|emb|CAJ23929.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 183
Score = 44.1 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
V I +++ +++ + +A+ + + P +G++G ++G+I+ +
Sbjct: 43 VRGRPRDMIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDH 102
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 103 GVGDVNQLAGGIGKALVCTATGMIIA 128
>gi|83943099|ref|ZP_00955559.1| MotA/TolQ/ExbB proton channel family protein [Sulfitobacter sp.
EE-36]
gi|83846107|gb|EAP83984.1| MotA/TolQ/ExbB proton channel family protein [Sulfitobacter sp.
EE-36]
Length = 230
Score = 44.1 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILG 199
+ E + + + + + + P +G+ G +LG+I+A +L P IL
Sbjct: 100 ERLQAEAETRFAKLETGFRLLDSVAQLAPLLGLFGTVLGMIEAFRSLQAAGSQVDPSILA 159
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
I V+L T +G++++ P + + +I KA++ +N
Sbjct: 160 GGIWVALLTTAVGLVVA----MPTALILSWLEQRMEAERVIADKAILTVLN 206
>gi|78061937|ref|YP_371845.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77969822|gb|ABB11201.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 598
Score = 44.1 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
+E+ + + + R +I + I MD + + K ++ P +G++G
Sbjct: 453 HEIYSRVDNNGRTVITSESIE-AIRASMDATLVRENQKLSKSMVLLTIAISGGPFLGLLG 511
Query: 180 AILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++G++ + + + I +L T+ G+ ++
Sbjct: 512 TVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVTGLFVA 552
>gi|326316752|ref|YP_004234424.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373588|gb|ADX45857.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 238
Score = 44.1 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 54/180 (30%), Gaps = 18/180 (10%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
+ ++ L + L+I +K + + +
Sbjct: 20 AVAVLLLGMSLASWIVILIKALDIIKFKKHARAAR-------DFWHSEDFAAGMEKLGSD 72
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
D+P+ + + D + S I + ID
Sbjct: 73 ADNPFRHLALEGREATAHHRNTKAHLHDSL-------DVSDWITRSLRNCIDEFTARLQS 125
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI A+ + + + IG +L T LG+ ++
Sbjct: 126 GLAILASVGSTAPFIGLFGTVWGIYHALVAIGTSGQSTIDKVAGPIGEALIMTALGLAVA 185
>gi|332971556|gb|EGK10506.1| TonB family auxiliary protein ExbB [Kingella kingae ATCC 23330]
Length = 231
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I I+ A++ +G + P IG++G + GI A+ N+SQ S +
Sbjct: 117 LERELRHSISKIMNSYDGGMTALATIGSTAPFIGLLGTVWGIYHALINISQKGQMSIAEV 176
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T LG+ ++
Sbjct: 177 SGPIGEALVATALGLFVA 194
>gi|258545750|ref|ZP_05705984.1| TolQ protein [Cardiobacterium hominis ATCC 15826]
gi|258518995|gb|EEV87854.1| TolQ protein [Cardiobacterium hominis ATCC 15826]
Length = 243
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPK 196
+ M ++ + + + ++ +G S P IG++G + GI+ + G S S
Sbjct: 109 HNCRRAMTAALNRESSRQERGLNLLATIGSSAPYIGLLGTVYGIMNSFIAIGGAQSASIS 168
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 169 SVAPGIAEALIATAIGLLAA 188
>gi|253995474|ref|YP_003047538.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253982153|gb|ACT47011.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 241
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
R +E + ++I + ++ +G + P +G+ G + GI+ A+ + ++
Sbjct: 97 GDRQDVLERALRQQIQKERVTRESGLVVLASIGSTAPFVGLFGTVWGIMHALSAIGKTGS 156
Query: 197 ----ILGTAIGVSLTGTLLGI------ILSYSLCN 221
++ IG +L T +GI +L+Y+
Sbjct: 157 ASLDVVAGPIGEALIATAVGIAVAVPAVLAYNFFL 191
>gi|52841804|ref|YP_095603.1| biopolymer transport protein TolQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628915|gb|AAU27656.1| biopolymer transport protein TolQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 229
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+++R G I+ +M + + + +G P +G+ G + GI+
Sbjct: 93 FKEFVRCRKQGKVSIEPIQRVMQISHAKEAEKLEQHLPFFASVGSISPYVGLFGTVWGIM 152
Query: 186 KAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ +
Sbjct: 153 TSFQALGHAQQATIAMVAPGISEALVATALGLFTA 187
>gi|54294382|ref|YP_126797.1| hypothetical protein lpl1451 [Legionella pneumophila str. Lens]
gi|54297487|ref|YP_123856.1| hypothetical protein lpp1532 [Legionella pneumophila str. Paris]
gi|53751272|emb|CAH12683.1| hypothetical protein lpp1532 [Legionella pneumophila str. Paris]
gi|53754214|emb|CAH15691.1| hypothetical protein lpl1451 [Legionella pneumophila str. Lens]
Length = 224
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+++R G I+ +M + + + +G P +G+ G + GI+
Sbjct: 88 FKEFVRCRKQGKVSIEPIQRVMQISHAKEAEKLEQHLPFFASVGSISPYVGLFGTVWGIM 147
Query: 186 KAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ +
Sbjct: 148 TSFQALGHAQQATIAMVAPGISEALVATALGLFTA 182
>gi|296113197|ref|YP_003627135.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
gi|295920891|gb|ADG61242.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
Length = 229
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 11/121 (9%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ + + +E + + K ++ +G P IG+ G + GI+ A L Q
Sbjct: 98 LSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQ 157
Query: 194 SPKIL----GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI---IVKKALI 246
+ + +I +L T LG+ ++ P T K + LY + + LI
Sbjct: 158 AESVGLATVAPSIAEALIATALGLFVA----IPATMAYNHFATKSNTLYENRSLFCEGLI 213
Query: 247 A 247
+
Sbjct: 214 S 214
>gi|260222818|emb|CBA32766.1| hypothetical protein Csp_B15670 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 208
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLP 173
+N+ L + +R + N+ + E+ + ++ ++ A+ + + P
Sbjct: 66 KNSALGEVLASALRAV---NSDPHCSEDDLRATMEGAGRLVAQRLENYLTALGTIASAAP 122
Query: 174 AIGIVGAILGIIKAMGNL------SQSPKILGTAIGVSLTGTLLGIILS 216
+G+ G ++G+I+ G+ +P L I ++L T G++++
Sbjct: 123 LLGLFGTVVGMIEIFGSQAPGSTGGGNPAQLAHGISIALYNTAFGLVVA 171
>gi|149201979|ref|ZP_01878953.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
gi|149145027|gb|EDM33056.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
Length = 219
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R V + LM E + + + + + + P +G+ G +LG+I+A
Sbjct: 80 RAFAVDPRDTVATRRLM-AEAEARFARLERGFRFLDTVAQVAPLLGLFGTVLGMIEAFQA 138
Query: 191 LSQ-----SPKILGTAIGVSLTGTLLGIILS 216
L P +L I V+L T G+ ++
Sbjct: 139 LQSAGAQVDPSLLAGGIWVALLTTAAGLAVA 169
>gi|87308941|ref|ZP_01091079.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
gi|87288284|gb|EAQ80180.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
Length = 263
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PK 196
E + ++E + + + + +G+ P +G+ G +LG+I A ++ + P
Sbjct: 148 EYKAAVEEAGEEQTGQLYRKIEVLGLIGQIAPMLGLTGTVLGMINAFNTIAATDGAPKPA 207
Query: 197 ILGTAIGVSLTGTLLGIILS 216
L AIG +L TLLG++++
Sbjct: 208 ELAEAIGQALVTTLLGLVVA 227
>gi|325928367|ref|ZP_08189562.1| biopolymer transport protein [Xanthomonas perforans 91-118]
gi|325541243|gb|EGD12790.1| biopolymer transport protein [Xanthomonas perforans 91-118]
Length = 209
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
V I +++ +++ + +A+ + + P +G++G ++G+I+ +
Sbjct: 69 VRGRPRDMIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDH 128
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 129 GVGDVNQLAGGIGKALVCTATGMIIA 154
>gi|148359110|ref|YP_001250317.1| biopolymer transport protein TolQ [Legionella pneumophila str.
Corby]
gi|296107158|ref|YP_003618858.1| biopolymer transport protein TolQ [Legionella pneumophila 2300/99
Alcoy]
gi|148280883|gb|ABQ54971.1| biopolymer transport protein TolQ [Legionella pneumophila str.
Corby]
gi|295649059|gb|ADG24906.1| biopolymer transport protein TolQ [Legionella pneumophila 2300/99
Alcoy]
gi|307610272|emb|CBW99836.1| hypothetical protein LPW_15971 [Legionella pneumophila 130b]
Length = 225
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+++R G I+ +M + + + +G P +G+ G + GI+
Sbjct: 89 FKEFVRCRKQGKVSIEPIQRVMQISHAKEAEKLEQHLPFFASVGSISPYVGLFGTVWGIM 148
Query: 186 KAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ +
Sbjct: 149 TSFQALGHAQQATIAMVAPGISEALVATALGLFTA 183
>gi|326559276|gb|EGE09704.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 103P14B1]
gi|326564930|gb|EGE15132.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 46P47B1]
gi|326566620|gb|EGE16762.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis BC1]
gi|326567860|gb|EGE17961.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 12P80B1]
gi|326571035|gb|EGE21059.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis BC7]
gi|326573332|gb|EGE23300.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 101P30B1]
gi|326575770|gb|EGE25693.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis CO72]
gi|326576852|gb|EGE26758.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis O35E]
Length = 229
Score = 44.1 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 11/121 (9%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ + + +E + + K ++ +G P IG+ G + GI+ A L Q
Sbjct: 98 LSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQ 157
Query: 194 SPKIL----GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI---IVKKALI 246
+ + +I +L T LG+ + P T K + LY + + LI
Sbjct: 158 AESVGLATVAPSIAEALIATALGLFAA----IPATMAYNHFATKSNTLYENRSLFCEGLI 213
Query: 247 A 247
+
Sbjct: 214 S 214
>gi|153877900|ref|ZP_02004410.1| MotA/TolQ/ExbB proton channel family protein [Beggiatoa sp. PS]
gi|152065636|gb|EDN65590.1| MotA/TolQ/ExbB proton channel family protein [Beggiatoa sp. PS]
Length = 202
Score = 44.1 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ + ++ ++EE ++++ + +A+ + E P +G++G + G+I+ +
Sbjct: 78 LVNRHHDREMMKASIEEESSQVIHDLERYLNALGTIAEIAPLLGLLGTVTGMIRMFAAVG 137
Query: 193 Q----SPKILGTAIGVSLTGTLLGIILS 216
+ +P++L + + +L T G+ ++
Sbjct: 138 EVGLGNPQVLSSGLSEALITTAAGLSVA 165
>gi|118588329|ref|ZP_01545738.1| tolQ Protein [Stappia aggregata IAM 12614]
gi|118439035|gb|EAV45667.1| tolQ Protein [Stappia aggregata IAM 12614]
Length = 234
Score = 44.1 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ +MD I ++ +G + P IG+ G + GI+ A + S +
Sbjct: 114 QQRIDRVMDVTIQREAERLESRLLILATVGSAAPFIGLFGTVWGIMTAFQAIAASESTNL 173
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 174 AVVAPGIAEALFATALGLLAA 194
>gi|255264187|ref|ZP_05343529.1| MotA/TolQ/ExbB proton channel family domain protein [Thalassiobium
sp. R2A62]
gi|255106522|gb|EET49196.1| MotA/TolQ/ExbB proton channel family domain protein [Thalassiobium
sp. R2A62]
Length = 210
Score = 44.1 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
+ M +V + + ++ ++ L + + + + P +G+ G +LG+I
Sbjct: 77 KNAMAAALVRGDDTTQ-KSRVEAGASAHLTRLEGGFRILDSIAQIAPLLGLFGTVLGMID 135
Query: 187 AMGNLSQ-----SPKILGTAIGVSLTGTLLGIILS 216
A L P +L I V+L T G+ ++
Sbjct: 136 AFQALQDAGNSVDPSLLAGGIWVALLTTAAGLAVA 170
>gi|285018587|ref|YP_003376298.1| biopolymer transport exbb transmembrane protein [Xanthomonas
albilineans GPE PC73]
gi|283473805|emb|CBA16308.1| probable biopolymer transport exbb transmembrane protein
[Xanthomonas albilineans]
Length = 249
Score = 44.1 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDII----LYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
++ G + ++ E I+ ++ + + + + + P +G++G ++G+I+
Sbjct: 99 LLAAGLEVRHRSREIVRERIEDTGRHVVHRMERFLNTLGTVASAGPLLGLLGTVVGMIQM 158
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ L IG +L T G+I++
Sbjct: 159 FLGILDHGVGDVNQLAGGIGKALVCTATGMIIA 191
>gi|326560191|gb|EGE10579.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 7169]
gi|326570298|gb|EGE20343.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis BC8]
Length = 229
Score = 44.1 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 11/121 (9%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ + + +E + + K ++ +G P IG+ G + GI+ A L Q
Sbjct: 98 LSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQ 157
Query: 194 SPKIL----GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI---IVKKALI 246
+ + +I +L T LG+ + P T K + LY + + LI
Sbjct: 158 AESVGLATVAPSIAEALIATALGLFAA----IPATMAYNHFATKSNTLYENRSLFCEGLI 213
Query: 247 A 247
+
Sbjct: 214 S 214
>gi|319941768|ref|ZP_08016090.1| TolQ [Sutterella wadsworthensis 3_1_45B]
gi|319804701|gb|EFW01568.1| TolQ [Sutterella wadsworthensis 3_1_45B]
Length = 223
Score = 44.1 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 8/178 (4%)
Query: 45 FVMANPLKVIKDSGVSL--LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHID 102
++AN V+K L L + + + Q + + + + S E +D
Sbjct: 11 TLIANASLVVKAVLAILIVLSLASWTVIFQKFFVVRRAMRQTDDFESRFWSGTELTKLLD 70
Query: 103 DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY 162
S + + + + F+ R + M +
Sbjct: 71 TANRSRDTSGMEERIFAAGMNEFMKQ--RQTAGAADTVNSVSRAMRAVFTREMDRLENGL 128
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI+ A LS S ++ I +L T +G+ +
Sbjct: 129 PMLASIGSTSPYIGLFGTVWGIMNAFTGLSSLENASLAVVAPGIAEALVATAIGLFAA 186
>gi|312143690|ref|YP_003995136.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
gi|311904341|gb|ADQ14782.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
Length = 205
Score = 44.1 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG--NLSQSP 195
+ + MD E L E + ++ + ++ P +G++G + G+I + SP
Sbjct: 84 VNKEQFQLFMDAEEVDKLPELERGLGLLNFLAQASPTLGLLGTVSGMINTFQVLGIGGSP 143
Query: 196 KILGTAIGVSLTGTLLGIIL---SYSLCNPLTSQIKSTRLKQHRLY 238
+ + I +L T G+++ + + + S+I + L
Sbjct: 144 EQMAVGISEALFTTAAGLVISLPALAFYHYFYSKIDKLVNQMDNLR 189
>gi|149202849|ref|ZP_01879820.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
gi|149143395|gb|EDM31431.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
Length = 231
Score = 43.7 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
I+ MD I ++ +G + P IG+ G + GI+ A +++ + +
Sbjct: 115 RIDRSMDVAIAKESEGLQSGLQVLATVGSTAPFIGLFGTVWGIMHAFVEIAEQQNTNLAV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T LG+I + +++ + + Y
Sbjct: 175 VAPGIAEALLATGLGLIAAIPAVI-FYNKLSADADRIVAGYE 215
>gi|323141187|ref|ZP_08076088.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
gi|322414330|gb|EFY05148.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
Length = 208
Score = 43.7 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-- 192
+ +E ++ + D I+ K + +S + P +G++G I G+I + L+
Sbjct: 85 IKGDLGQRLETIVYTKADRIIDSLEKNINYLSVVIGLSPMLGLLGTITGMISSFNALNER 144
Query: 193 -QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
Q+P + IG +L T+ G+ ++ + + + + S + V L+
Sbjct: 145 TQNPMAVTAGIGEALITTVFGLCIA-IMGMCIHAYLTSKIKTETLNINEVADTLVDI 200
>gi|319944096|ref|ZP_08018374.1| MotA/TolQ/ExbB proton channel family protein [Lautropia mirabilis
ATCC 51599]
gi|319742590|gb|EFV94999.1| MotA/TolQ/ExbB proton channel family protein [Lautropia mirabilis
ATCC 51599]
Length = 203
Score = 43.7 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYE----IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G +E I++ M+E + ++ + + + P +G+ G ++G+I+
Sbjct: 72 RVLATGLRHEFESRDMIKDAMEETGRAVAHDLERFLPTLGTLATVAPLLGLFGTVIGMIE 131
Query: 187 AMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
G+ P L I ++L T GI ++
Sbjct: 132 IFGSQAPSGNDPTQLAHGISIALYNTAFGIGVA 164
>gi|120599386|ref|YP_963960.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|120559479|gb|ABM25406.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
Length = 451
Score = 43.7 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + + ++E L + + IL E I + P +G++G + G+I
Sbjct: 322 LKVYQENKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATF 381
Query: 189 GNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++ + PK++ I ++L T+ G++ + L + + + + ++
Sbjct: 382 QSIQLFGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAIVVARSKSIVQVLEEQSAG 440
Query: 245 LIA 247
+IA
Sbjct: 441 IIA 443
>gi|325917581|ref|ZP_08179781.1| biopolymer transport protein [Xanthomonas vesicatoria ATCC 35937]
gi|325536215|gb|EGD08011.1| biopolymer transport protein [Xanthomonas vesicatoria ATCC 35937]
Length = 219
Score = 43.7 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
I +++ +++ + +A+ + + P +G++G ++G+I+ + L
Sbjct: 87 IRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQL 146
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T G+I++
Sbjct: 147 AGGIGKALVCTATGMIIA 164
>gi|330891871|gb|EGH24532.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. mori
str. 301020]
Length = 228
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 91 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGVTGSAS 150
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 151 LEAVAGPIGHALVATGVGIAVA 172
>gi|300113154|ref|YP_003759729.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299539091|gb|ADJ27408.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 233
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILY----EKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G +M E I+ + E + + + + P +G++G ++G+IK
Sbjct: 72 RILAAGLVNRNRSREIMKESIEDVGRHVTLELERFLNTLGTIAAITPLLGLLGTVIGMIK 131
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +P +L I +L T G+ ++
Sbjct: 132 VFTVITAQGVDNPAVLAGGISEALITTAAGLAVA 165
>gi|90020002|ref|YP_525829.1| TonB system biopolymer transport component [Saccharophagus
degradans 2-40]
gi|89949602|gb|ABD79617.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 460
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARS-YEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ V + E+L + + IL E+ AI + P +G++G + G+I
Sbjct: 331 RILKVAEDNPGIDTESLELKLEEAILKERPAIESWLGAIKIISMIAPLMGLLGTVTGMIV 390
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ PK + + I +L T++G+I++
Sbjct: 391 TFEAITIFGAGDPKNMASGISGALMTTVMGLIVA 424
>gi|146292618|ref|YP_001183042.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|145564308|gb|ABP75243.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
Length = 451
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + + ++E L + + IL E I + P +G++G + G+I
Sbjct: 322 LKVYQENKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATF 381
Query: 189 GNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++ + PK++ I ++L T+ G++ + L + + + + ++
Sbjct: 382 QSIQLFGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAIVVARSKSIVQVLEEQSAG 440
Query: 245 LIA 247
+IA
Sbjct: 441 IIA 443
>gi|330937170|gb|EGH41211.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 235
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 98 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGVTGSAS 157
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 158 LEAVAGPIGHALVATGVGIAVA 179
>gi|325983228|ref|YP_004295630.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325532747|gb|ADZ27468.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 216
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYE-IENLMDEEIDIILYEKLKPYHAISHMGES 171
+ +L + + + ++I + E+ +E II + A+ + +
Sbjct: 64 LEKILSGLDSRHYYKRFFEVVISNRHQPTWWTESRAADEAQIIEESLARRLWALETIVTA 123
Query: 172 LPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
P +G+VG ++G+++A + +P + + +L T++G+ ++
Sbjct: 124 APLLGLVGTVIGMMRAFQVIGSEGLVNPTAVTGGVAEALIATVVGLAIA 172
>gi|307566447|ref|ZP_07628881.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella amnii CRIS 21A-A]
gi|307344835|gb|EFN90238.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella amnii CRIS 21A-A]
Length = 263
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q SP I+ + + V+L T+ GII
Sbjct: 164 EKGCSWITLFIAMGPSLGFLGTVIGMVMAFDQIQQIGDISPTIVASGMKVALITTIFGII 223
Query: 215 LSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ L + ++ V L A M
Sbjct: 224 VALLLMVFYNYILSKIEHLTSQMEESVITLLDAIME 259
>gi|302134731|ref|ZP_07260721.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 228
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 91 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGVTGSAS 150
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 151 LEAVAGPIGHALVATGVGIAVA 172
>gi|213971562|ref|ZP_03399672.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|237797879|ref|ZP_04586340.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806025|ref|ZP_04592729.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|301383609|ref|ZP_07232027.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302059434|ref|ZP_07250975.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|213923665|gb|EEB57250.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|331020729|gb|EGI00786.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027135|gb|EGI07190.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 235
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 98 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGVTGSAS 157
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 158 LEAVAGPIGHALVATGVGIAVA 179
>gi|110679373|ref|YP_682380.1| putative proton transporter TolQ [Roseobacter denitrificans OCh
114]
gi|109455489|gb|ABG31694.1| putative proton transporter TolQ [Roseobacter denitrificans OCh
114]
Length = 231
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
I+ MD I+ ++ +G S P IG+ G ++GI+ A +++ +
Sbjct: 114 QRIDRSMDVAINKEAEHLRDGLTVLATIGSSTPFIGLFGTVIGIMNAFIEIAEQQNTNLA 173
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++ I +L T LG+ + +++ + + Y
Sbjct: 174 VVAPGIAEALLATGLGLFAAIPAVI-YYNKLSADADRILAGYE 215
>gi|302189185|ref|ZP_07265858.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
syringae 642]
Length = 235
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 98 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGVTGSAS 157
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 158 LEAVAGPIGHALVATGVGIAVA 179
>gi|257482558|ref|ZP_05636599.1| biopolymer transport protein ExbB, putative [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|289626255|ref|ZP_06459209.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|320326518|gb|EFW82569.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. B076]
gi|330866646|gb|EGH01355.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 228
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 91 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGVTGSAS 150
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 151 LEAVAGPIGHALVATGVGIAVA 172
>gi|227824312|ref|ZP_03989144.1| predicted protein [Acidaminococcus sp. D21]
gi|226904811|gb|EEH90729.1| predicted protein [Acidaminococcus sp. D21]
Length = 211
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Query: 138 ARSYEI---ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-- 192
EI E + E +L + +S + P +G++G I G++ + GNL
Sbjct: 86 DAPEEIRAQEAFIMSESKQVLDRYKEGLSYLSVIITLAPLLGLLGTITGMMASFGNLGSR 145
Query: 193 -QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
++P + + IG +L T+ G+ ++ + + + + ++
Sbjct: 146 WENPFAVTSGIGEALITTVFGLAIA-IVTLCCHAYFEERVHRIALDMEMIAST 197
>gi|254514451|ref|ZP_05126512.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium NOR5-3]
gi|219676694|gb|EED33059.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium NOR5-3]
Length = 207
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIIL----YEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G A ++ ++M E I+ +E + + + + P +G++G ++G+I+
Sbjct: 72 RILAAGLANAHHGRDVMKESIEEAAGHVVHELERYLNTLGTIAAIAPLLGLLGTVVGMIR 131
Query: 187 A----MGNLSQSPKILGTAIGVSLTGTLLGIILS 216
M + + L I +L T G+ ++
Sbjct: 132 VFAEIMSQGTGNASALAGGISEALITTAAGLCVA 165
>gi|319425922|gb|ADV53996.1| TonB mediated energy transduction system, permease component, TtpC
[Shewanella putrefaciens 200]
Length = 451
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I ++
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ PK++ I ++L T+ G++ + L + + + + ++ +IA
Sbjct: 387 FGTGDPKLMAGGISMALITTVQGLVAALPLML-MHAIVVARSKSIVQVLEEQSAGIIA 443
>gi|28867502|ref|NP_790121.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28850736|gb|AAO53816.1| biopolymer transport protein ExbB, putative [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 235
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 98 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGLTGSAS 157
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 158 LEAVAGPIGHALVATGVGIAVA 179
>gi|66043406|ref|YP_233247.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|71737469|ref|YP_277134.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289647956|ref|ZP_06479299.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aesculi
str. 2250]
gi|298489475|ref|ZP_07007486.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|63254113|gb|AAY35209.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|71558022|gb|AAZ37233.1| biopolymer transport protein ExbB, putative [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|298156049|gb|EFH97158.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320331416|gb|EFW87357.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
gi|331012799|gb|EGH92855.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 235
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 98 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGVTGSAS 157
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 158 LEAVAGPIGHALVATGVGIAVA 179
>gi|282879507|ref|ZP_06288241.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella timonensis CRIS 5C-B1]
gi|281306654|gb|EFA98680.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella timonensis CRIS 5C-B1]
Length = 262
Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+I + SP I+ + V+L T+ GII
Sbjct: 163 EKGCSWITLFIAMAPSLGFLGTVIGMIMTFDQIQMAGDISPTIVAAGMKVALITTIFGII 222
Query: 215 LS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
++ N + S+I + I + L+
Sbjct: 223 VALVLQVFYNYILSKIDHITAQMEESAITLLDTLM 257
>gi|330957254|gb|EGH57514.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 228
Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 91 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGLTGSAS 150
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 151 LEAVAGPIGHALVATGVGIAVA 172
>gi|317051747|ref|YP_004112863.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316946831|gb|ADU66307.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 215
Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNL-SQSPKIL 198
+E ++ E + + ++ + S P IG++G + GII +G + S S ++
Sbjct: 102 VERIVRAESMAKVRDMESSLSTLAIIASSAPYIGLLGTVWGIIRSFHTIGAMRSASLAVV 161
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
+ +L T LG+ + + + +Q + L+A +
Sbjct: 162 APGLSEALVATALGLFAAIPAVM-FYNVFAARIKQQVSIMESFADELMAIL 211
>gi|269103010|ref|ZP_06155707.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162908|gb|EEZ41404.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 194
Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 9/136 (6%)
Query: 126 ICDYMRMIIVGNARSYEIEN----LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+Y R+ + M + + E ++ +G P IG+ G +
Sbjct: 54 FKEYARLHRSNGKVPEAVMEGTGRAMRVALSREVEELETNLPFLATVGSISPYIGLFGTV 113
Query: 182 LGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
GI+ A L + ++ I +L T +G+ + +++ + K
Sbjct: 114 WGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGLFAAIPAVM-FYNRLTNRVAKLEHT 172
Query: 238 YIIVKKALIAYMNGAI 253
Y + + ++
Sbjct: 173 YATFMEEFSSILHRQA 188
>gi|262277493|ref|ZP_06055286.1| protein TolQ [alpha proteobacterium HIMB114]
gi|262224596|gb|EEY75055.1| protein TolQ [alpha proteobacterium HIMB114]
Length = 225
Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
+++ +MD ID + + ++ +G P IG+ G + GI+ + ++ + S
Sbjct: 114 EKVKRVMDVAIDKEVEKYENKLTFLATVGSVAPFIGLFGTVWGIMNSFQSIAISRNTSLA 173
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
I+ I +L T LG++ + ++ S+ K + + ++ +
Sbjct: 174 IVAPGIAEALFATALGLLAAIPAVV-AYNKFTSSSRKFTQKLENFTQTFLSII 225
>gi|330987984|gb|EGH86087.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 235
Score = 43.7 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI+ A+ ++ S S
Sbjct: 98 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMDALQSIGVTGSAS 157
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 158 LEAVAGPIGHALVATGVGIAVA 179
>gi|332533405|ref|ZP_08409270.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037114|gb|EGI73571.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 455
Score = 43.7 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 112 SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS---HM 168
I L++ M + S + L + + IL E K ++ +
Sbjct: 307 KIRRQLKDTVARDDNPLGRVMKVKDQFPSVSHDTLELKLSEAILREMPKVTRNLTLIKII 366
Query: 169 GESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
P +G++G + G+I ++ PK++ I +L T+LG++++
Sbjct: 367 SVVAPLLGLLGTVTGMINTFQAITLFGTGDPKLMAGGISQALVTTVLGLVVA 418
>gi|162453347|ref|YP_001615714.1| tolQ protein [Sorangium cellulosum 'So ce 56']
gi|161163929|emb|CAN95234.1| tolQ protein [Sorangium cellulosum 'So ce 56']
Length = 236
Score = 43.7 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 136 GNARSYEI-ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
G E+ + + I + + ++ +G P +G++G ++GII A ++ +
Sbjct: 100 GGVPPVELARREVSRRREAISADLRRGLSVLATVGSVAPFVGLLGTVIGIITAFQTIAST 159
Query: 195 PK----ILGTAIGVSLTGTLLGIILSYSLCNPL 223
+ I +L T LG+ ++
Sbjct: 160 GSGGLGAVSAGIAEALIVTALGLGVAIPAVLCF 192
>gi|15837681|ref|NP_298369.1| hypothetical protein XF1079 [Xylella fastidiosa 9a5c]
gi|28198276|ref|NP_778590.1| biopolymer transport protein [Xylella fastidiosa Temecula1]
gi|71275594|ref|ZP_00651879.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71899491|ref|ZP_00681648.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|170729598|ref|YP_001775031.1| biopolymer transport protein [Xylella fastidiosa M12]
gi|182680913|ref|YP_001829073.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|9106029|gb|AAF83889.1|AE003944_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
gi|28056346|gb|AAO28239.1| biopolymer transport protein [Xylella fastidiosa Temecula1]
gi|71163485|gb|EAO13202.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71730711|gb|EAO32785.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|167964391|gb|ACA11401.1| biopolymer transport protein [Xylella fastidiosa M12]
gi|182631023|gb|ACB91799.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|307579381|gb|ADN63350.1| biopolymer transport protein [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 220
Score = 43.7 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
I +++ +++ + +A+ + + P +G++G ++G+I+ +
Sbjct: 86 EMIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVGDVN 145
Query: 197 ILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 146 QLAGGIGKALVCTATGMIIA 165
>gi|294085863|ref|YP_003552623.1| Biopolymer transport protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665438|gb|ADE40539.1| Biopolymer transport protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 241
Score = 43.7 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
IE M+ I + + + ++ +G P +G+ G + GI+ + ++++S +
Sbjct: 122 RIERSMNFTITREMERLERGMNFLASIGSVSPFVGLFGTVWGIMSSFQSIAESKNTSLAV 181
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T LG+ +
Sbjct: 182 VAPGIAEALFATALGLAAA 200
>gi|198282784|ref|YP_002219105.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667894|ref|YP_002424981.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247305|gb|ACH82898.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520107|gb|ACK80693.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 206
Score = 43.7 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDI---ILYEKLKPY-HAISHMGESLPAIGIVGAILGIIK 186
RM++V + + +++ E ++ L Y + + + P +G++G + GI+
Sbjct: 75 RMMLVALQSAGQPRDVIKESVEETGRHEVAHLDRYLNFLGSIAGVAPLLGLLGTVFGIMH 134
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
A + PK L + I +L T G+I++
Sbjct: 135 AFAAIGMVGAGDPKALASGIAEALITTASGLIVA 168
>gi|289207748|ref|YP_003459814.1| protein TolQ [Thioalkalivibrio sp. K90mix]
gi|288943379|gb|ADC71078.1| protein TolQ [Thioalkalivibrio sp. K90mix]
Length = 230
Score = 43.7 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 16/155 (10%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNST-----IFTSIPTVLENNELTTF------- 125
+ +L L +K S N DD + V E+T
Sbjct: 27 LASVLSWLAIIVKARSLNAAHRACDDFEERFWSGADLSHLYEGVRRKQEMTGMEHVFSSG 86
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+++R G + M I + E + ++ +G + P IG+ G + GI+
Sbjct: 87 FKEFLRARQHGIPAGEPAQRAMRVAIAREIDEMERYLQFLATVGSTSPYIGLFGTVWGIM 146
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A LS + ++ I +L T LG+ +
Sbjct: 147 HAFLGLSGVQQATLAMVAPGIAEALIATALGLFAA 181
>gi|62550951|emb|CAI79306.1| TolR protein [Aeromonas caviae]
Length = 108
Score = 43.7 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 134 IVGNARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
++G +E L + I E + + P +G++G ++G+I
Sbjct: 10 VLGTDPELSMETLELRLDEAIPQETPRMESGIGMVKVIAAIAPMLGLLGTVVGMIATFQA 69
Query: 191 L----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + PK++ I +L T+ G++++
Sbjct: 70 ITLFGTGDPKLMAGGISEALVTTMQGLVVA 99
>gi|21231566|ref|NP_637483.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768314|ref|YP_243076.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991453|ref|YP_001903463.1| macromolecule import protein [Xanthomonas campestris pv. campestris
str. B100]
gi|21113252|gb|AAM41407.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573646|gb|AAY49056.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167733213|emb|CAP51411.1| macromolecule import protein [Xanthomonas campestris pv.
campestris]
Length = 222
Score = 43.7 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
I +++ +++ + +A+ + + P +G++G ++G+I+ + L
Sbjct: 88 IRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQL 147
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T G+I++
Sbjct: 148 AGGIGKALVCTATGMIIA 165
>gi|15887516|ref|NP_353197.1| biopolymer transport protein [Agrobacterium tumefaciens str. C58]
gi|15155043|gb|AAK85982.1| biopolymer transport protein [Agrobacterium tumefaciens str. C58]
Length = 340
Score = 43.7 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D + G + + + + A++ +G + P +G+ G + GI+
Sbjct: 190 LSDAVVEHTDGGGIKERVSSALSRIETHAGRRMSRGTGALATIGSTAPFVGLFGTVWGIM 249
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ ++S+ + ++ I +L T +G++ +
Sbjct: 250 NSFISISESQTTNLAVVAPGIAEALLATAIGLVAA 284
>gi|154253330|ref|YP_001414154.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
gi|154157280|gb|ABS64497.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
Length = 257
Score = 43.7 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT-FICDYMRMIIVG 136
+LK+ L K R E +D + + +S+ + + + +R + G
Sbjct: 70 LLKIFQFWSAGLSK--RAFVEPALDKIESGDLASSLEVLKKQRTPLARAMAAGVRAKMRG 127
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
+ R ++ + + + + + + +G P +G++G ++G+I A +L +
Sbjct: 128 DLRDEDVASEIVRVGTMEIGSLQRYLRWLEVIGNISPLLGLLGTVIGMINAFQSLEEAGT 187
Query: 194 --SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
P +L I V+L T +G+I++ P + + K ++ + ++ A
Sbjct: 188 QVDPALLSGGIWVALLTTAVGLIVA----LPAITALNLLEGKIDQVRLSMRDA 236
>gi|257125314|ref|YP_003163428.1| MotA/TolQ/ExbB proton channel [Leptotrichia buccalis C-1013-b]
gi|257049253|gb|ACV38437.1| MotA/TolQ/ExbB proton channel [Leptotrichia buccalis C-1013-b]
Length = 208
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 85 LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIE 144
L +L+ G+R E D +S + S+ ++ N ++ D N+ IE
Sbjct: 48 LYKSLRTGNREEILRLCKDKTDS-VSKSVTKIVSNMDINFAELD--------NSHRQVIE 98
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGT 200
++ E I E K + + + P +G++G + G+I A L+++ + I+ +
Sbjct: 99 GIISESILEQTTELEKGMSLLGTVVNAAPQLGLLGTVTGMITAFSALTRNGESTARIVAS 158
Query: 201 AIGVSLTGTLLGIILS 216
I +L T G+I++
Sbjct: 159 GISEALYTTAFGLIVA 174
>gi|291287517|ref|YP_003504333.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884677|gb|ADD68377.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 459
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
IEN M E I L + ++ + P +G++G + G+I L +
Sbjct: 335 GETQEVIENAMQEAILRELPRMERFLPTLNILAAVAPLLGLLGTVTGMINTFNILTIFGT 394
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
P+++ I +L T LG+ ++ + ++ +
Sbjct: 395 GDPRMMSGGISEALVTTQLGLAVAIPVML-FHHMLERRVDR 434
>gi|146329605|ref|YP_001210059.1| TolQ protein [Dichelobacter nodosus VCS1703A]
gi|146233075|gb|ABQ14053.1| TolQ protein [Dichelobacter nodosus VCS1703A]
Length = 227
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
++ EI +I E K ++ S P IG++G + GI+ + L S +
Sbjct: 109 RRAIEAEIMLIGDEHEKNLSVLATFASSAPYIGLLGTVYGIMTSFIALGGVQQSSIASVA 168
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 169 PGIAEALIATAIGLCAA 185
>gi|119774392|ref|YP_927132.1| MotA/TolQ/ExbB proton channel family protein [Shewanella
amazonensis SB2B]
gi|119766892|gb|ABL99462.1| MotA/TolQ/ExbB proton channel family protein [Shewanella
amazonensis SB2B]
Length = 451
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 142 EIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
++E L + + IL E I + P +G++G + G+I ++ +
Sbjct: 332 DVETLELKLDEAILKETPAIETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGD 391
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCN 221
PK++ I ++L T+ G++ + L
Sbjct: 392 PKLMAGGISMALVTTVQGLVAALPLML 418
>gi|227823311|ref|YP_002827283.1| putative TolQ protein uptake system component [Sinorhizobium fredii
NGR234]
gi|227342312|gb|ACP26530.1| putative TolQ protein uptake system component [Sinorhizobium fredii
NGR234]
Length = 239
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G S P IG+ G ++GI+ + + S +
Sbjct: 111 QMRIDRAMDVTLARESESLEARLGSLATIGSSAPFIGLFGTVVGIMTSFQAIAGSKSTNL 170
Query: 196 KILGTAIGVSLTGTLLGII------LSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ I +L T +G++ ++Y+ ++ + + +
Sbjct: 171 AVVAPGIAEALLATAIGLLAAIPAVIAYNKFTADAGKLSARMEAFADEFSAIL 223
>gi|88810555|ref|ZP_01125812.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
gi|88792185|gb|EAR23295.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
Length = 234
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 82/238 (34%), Gaps = 30/238 (12%)
Query: 26 YILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYIL 85
LI F ++I+ GA + + +I ++ + +D +
Sbjct: 14 ASLIVQFVLLILLGASI------SSWTLIFRKWQTIGQAQSGANAFEDRF---------- 57
Query: 86 MYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN 145
G+ E + P+ E T V +A +
Sbjct: 58 ---WSGGNLAEIYAQVSQPHEQAGGLERIFRAGFREFTRMRKQGSNPESVVDASHRAMRV 114
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK---AMGNLSQ-SPKILGTA 201
+ EIDI+ E P+ ++ +G + P IG+ G + GI+ A+GN+ Q + +
Sbjct: 115 SLQREIDIL--ESYVPF--LATVGSTSPYIGLFGTVWGIMNAFLALGNMQQATLTTVAPG 170
Query: 202 IGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG--AIPQVA 257
I +L T +G+ + ++ S + Y I + + + P +A
Sbjct: 171 IAEALVATAMGLFAAIPAVI-AYNRYASQIERLTNHYEIFMEEFASILQRHVHSPPLA 227
>gi|257464098|ref|ZP_05628482.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
gi|317061617|ref|ZP_07926102.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
gi|313687293|gb|EFS24128.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
Length = 202
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKL---KPYHAISHMGESLPAIGIVGAILGIIK 186
+R + + ++++ +I+L + ++ +G P G++G + G+IK
Sbjct: 75 IRTFLKRAKKGQDVQDYESIIKEIMLESMTPLDRGLSSLEAIGSLAPMCGLLGTVTGMIK 134
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCN--PLTSQIKSTRLKQH 235
A N+S P I+ I +L T G+ ++ + + S+I + R +
Sbjct: 135 AFINISKMGAGDPTIVADGISEALVTTAAGLYVAIPVIAAYNIFSKIAARREDEV 189
>gi|51246825|ref|YP_066709.1| biopolymer transport protein ExbB [Desulfotalea psychrophila LSv54]
gi|50877862|emb|CAG37702.1| related to biopolymer transport protein (ExbB) [Desulfotalea
psychrophila LSv54]
Length = 174
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTL 210
E + I P +G+ G + G+I+ +++ +P+ L I ++ T
Sbjct: 76 QQEMKSGHSTIKIFATIAPFLGLFGTVTGMIRTFQSVATFGLANPRALAGGISEAMVTTQ 135
Query: 211 LGIILS 216
G++++
Sbjct: 136 FGLLVA 141
>gi|116619648|ref|YP_821804.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
gi|116222810|gb|ABJ81519.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
Length = 237
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + ++ + + + ++ P IG++G +LGII+A +LSQ S K +
Sbjct: 122 LERTLQLGVNEEISKLERNMSWLATTASVTPFIGLLGTVLGIIRAFEDLSQMGSTSIKAI 181
Query: 199 GTAIGVSLTGTLLGIILS 216
G I +L T +G+ +
Sbjct: 182 GPGIAEALITTAVGLFAA 199
>gi|253687209|ref|YP_003016399.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753787|gb|ACT11863.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 227
Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + + P +G++G I+GII+ LS P + +G +L T LGI ++
Sbjct: 108 ILETVVTAAPLLGLLGTIMGIIETFKALSAAGISDPSQVSAGMGTALYATGLGIAIA 164
>gi|221134889|ref|ZP_03561192.1| putative Tol protein [Glaciecola sp. HTCC2999]
Length = 454
Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSL 219
I + P +G++G + G+I ++ PK++ I +L T+LG++++ +
Sbjct: 362 IIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTALVTTVLGLVVAIPM 421
Query: 220 CNPLTSQIKSTRLKQHRLYIIVKKALIA 247
L + + + + +IA
Sbjct: 422 TL-LYAMLNTRSKNIVYILQEQAAGVIA 448
>gi|238021536|ref|ZP_04601962.1| hypothetical protein GCWU000324_01436 [Kingella oralis ATCC 51147]
gi|237868516|gb|EEP69522.1| hypothetical protein GCWU000324_01436 [Kingella oralis ATCC 51147]
Length = 219
Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M+ R+ +E M I IL A++ +G + P +G++G + GI A+ N+
Sbjct: 94 MLSASLPRNAYLEREMRHSIGKILSRFEGGMMALATIGSTAPFVGLLGTVWGIYHALINI 153
Query: 192 SQ----SPKILGTAIGVSLTGTLLGIILS 216
S S + IG +L T +G+ +
Sbjct: 154 SNSGQMSIAAVAGPIGEALVATAVGLFAA 182
>gi|220934542|ref|YP_002513441.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219995852|gb|ACL72454.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 206
Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 131 RMIIVGNARSYEIENLMDEEIDII----LYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G ++M E I+ ++ + + + + P +G++G ++G+I+
Sbjct: 72 RVLAAGLINMGHTRDVMKEAIEETGRHVAHDLERFLNTLGTIAAITPLLGLLGTVVGMIQ 131
Query: 187 AMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ SP L I +L T GI ++ + + +
Sbjct: 132 VFSVITDVGVGSPGELAGGISQALITTAAGISVAVPSLI-FHRYFRGRVDELVLEMEMES 190
Query: 243 KALIAYMNGA 252
L+ ++G
Sbjct: 191 IKLVEVIHGE 200
>gi|254448719|ref|ZP_05062177.1| protein TolQ [gamma proteobacterium HTCC5015]
gi|198261727|gb|EDY86014.1| protein TolQ [gamma proteobacterium HTCC5015]
Length = 239
Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Query: 99 NHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN---LMDEEIDIIL 155
+ D Y + +P + +Y R + +G +E +M + +
Sbjct: 63 GDLRDIYEALQNRRVPRQGMEHIFEAGYREYARQVRLGVVPGQVVEAAQRVMRVALSREI 122
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLL 211
E ++ +G + P +G+ G ++GI+ + L Q + ++ I +L T +
Sbjct: 123 DELETRLSFLATVGSTSPYVGLFGTVVGIMNSFRALGQVQQATLSMVAPGIAEALIATAI 182
Query: 212 GIILS 216
G++ +
Sbjct: 183 GLLAA 187
>gi|290474102|ref|YP_003466978.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA [Xenorhabdus
bovienii SS-2004]
gi|289173411|emb|CBJ80188.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA [Xenorhabdus
bovienii SS-2004]
Length = 226
Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 101 VITGASRAMRIS--MNRELETV--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 154
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K ++Y + +A
Sbjct: 155 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLSQRVNKLEQIYDNFMEEFLAI 213
Query: 249 MNGAI 253
++
Sbjct: 214 LHRQA 218
>gi|332140184|ref|YP_004425922.1| putative Tol protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327550206|gb|AEA96924.1| putative Tol protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 454
Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
I + P +G++G + G+I ++ PK++ I +L T+LG++++
Sbjct: 362 IIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTALVTTVLGLVVA 418
>gi|239947582|ref|ZP_04699335.1| protein TolQ [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921858|gb|EER21882.1| protein TolQ [Rickettsia endosymbiont of Ixodes scapularis]
Length = 241
Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----K 196
I N M + + + K ++ +G S P +G+ G + GI+ + +++ S
Sbjct: 121 ERITNSMYLAQNREVEKLEKNLSFLATVGSSAPFVGLFGTVWGIMHSFQSIANSKNTSLA 180
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ +
Sbjct: 181 VVAPGIAEALLATAIGLFAA 200
>gi|71899426|ref|ZP_00681585.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|71730835|gb|EAO32907.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
Length = 220
Score = 43.3 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
I +++ +++ + +A+ + + P +G++G ++G+I+ +
Sbjct: 86 EMIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVGDVN 145
Query: 197 ILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 146 QLAGGIGKALVCTATGMIIA 165
>gi|300726783|ref|ZP_07060213.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bryantii
B14]
gi|299775896|gb|EFI72476.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bryantii
B14]
Length = 281
Score = 43.3 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I + P++G +G ++G++ A + Q SP I+ + + V+L T+ GII
Sbjct: 181 EKGCSWIKLFIAAAPSLGFLGTVIGMVMAFDQIEQAGDISPTIVASGMKVALITTIFGII 240
Query: 215 LS---YSLCNPLTSQIKS 229
++ N + S+I+
Sbjct: 241 VALILQMFYNYILSKIEH 258
>gi|257464145|ref|ZP_05628526.1| MotA/TolQ/ExbB proton channel [Fusobacterium sp. D12]
Length = 211
Score = 43.3 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-- 192
+ +E+L+ + + + + +S + P +G++G I G++ + L+
Sbjct: 85 MKEDIGKRLESLVYSKAERAIDGMEQHLDYLSVIIGLAPMLGLLGTITGMMSSFNALNER 144
Query: 193 -QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
Q+P + IG +L T+ G+ ++ L + + + S + + L+ M
Sbjct: 145 LQNPMAVTAGIGEALITTVFGLCIA-ILGMCIHAYLSSKVKTASLNLSEISEVLVDIME 202
>gi|188996671|ref|YP_001930922.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931738|gb|ACD66368.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
Length = 145
Score = 43.3 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS--YS 218
+ + P +G++G ++G+I A L + + AIG++L T +GI LS +
Sbjct: 56 LDFAATTSPLLGLLGTVIGLIIAFQELGKKGVSGAGEISAAIGLALVATAIGIALSLWFY 115
Query: 219 LCNPLTSQIKSTRLKQHRLYIIV 241
L + + ++ + I++
Sbjct: 116 LWFKFFNSKIQEKKEEIKSRILM 138
>gi|254489184|ref|ZP_05102388.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. GAI101]
gi|214042192|gb|EEB82831.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. GAI101]
Length = 208
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 64/159 (40%), Gaps = 7/159 (4%)
Query: 92 GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEI 151
G RN+ E +DD N + +I + + + I + I + +
Sbjct: 39 GKRNQAEKILDDWLNGRVDDAISEAGKRKSVLSRILQAVFSGIQARPTDVSYAEELSRQT 98
Query: 152 DIILYEKLKPY-HAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVS 205
+I + A+ + ++ P +G++G ++G+I A L + P L I V+
Sbjct: 99 AMIELATMSERMRALDMVVQAAPMLGLLGTVVGMIDAFSVLAVTEGAVDPTTLAGGIYVA 158
Query: 206 LTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
LT T G++L+ L + ++ ++ + + A
Sbjct: 159 LTTTAAGLVLA-LFAFFLATWLEGRIDRERNMIEALMSA 196
>gi|77166131|ref|YP_344656.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254435037|ref|ZP_05048544.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
gi|76884445|gb|ABA59126.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|207088148|gb|EDZ65420.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
Length = 253
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILY----EKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G A +M E I+ + E + + + + P +G++G ++G+IK
Sbjct: 92 RILAAGLANRNRSREIMKESIEDVGRHVTLELERFLNTLGTIAAITPLLGLLGTVIGMIK 151
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +P +L I +L T G+ ++
Sbjct: 152 VFTVITAQGVDNPAVLAGGISEALITTAAGLAVA 185
>gi|114765734|ref|ZP_01444832.1| proton transporter TolQ [Pelagibaca bermudensis HTCC2601]
gi|114541951|gb|EAU44986.1| proton transporter TolQ [Roseovarius sp. HTCC2601]
Length = 231
Score = 43.3 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----I 197
I+ MD I + + ++ +G + P +G+ G + GI+ A ++ +
Sbjct: 115 RIDRSMDVAIQKESEDLQRGLPVLATVGSTAPFVGLFGTVWGIMHAFIEIAAQQDTSLVV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T LG++ + +++ + + Y
Sbjct: 175 VAPGIAEALFATALGLVAAIPAVI-FYNKLSADADRIISGYE 215
>gi|94967180|ref|YP_589228.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
gi|94549230|gb|ABF39154.1| outer membrane transport energization protein ExbB [Candidatus
Koribacter versatilis Ellin345]
Length = 251
Score = 43.3 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAI 202
++ I+ E + ++ +G + P +G+ G ++GI+ A ++SQ+ + I
Sbjct: 138 LERAEAIVHAELKRGLSGLATIGATAPFVGLFGTVVGILNAFRSISQNKATGLGAVAGGI 197
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ ++
Sbjct: 198 SEALVTTAIGLFVA 211
>gi|282892410|ref|ZP_06300760.1| hypothetical protein pah_c253o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281497812|gb|EFB40173.1| hypothetical protein pah_c253o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 218
Score = 43.3 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----- 191
N +IEN M+ I + K +S + P IG++G +LG I+A +
Sbjct: 92 NRDKDQIENAMEISGLIEIAHLEKNAKILSIIAHIAPLIGLLGTVLGFIQAFSEMRMSGL 151
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
S +G A+ +L T G++++
Sbjct: 152 VDISATRIGEAMEYALVTTAAGLVVAIPCVL 182
>gi|330881261|gb|EGH15410.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 160
Score = 43.3 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 23 RSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGTVWGIMEALQSIGVTGSAS 82
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 83 LEAVAGPIGHALVATGVGIAVA 104
>gi|254499314|ref|ZP_05111986.1| truncated biopolymer transport protein TolQ [Legionella drancourtii
LLAP12]
gi|254351469|gb|EET10332.1| truncated biopolymer transport protein TolQ [Legionella drancourtii
LLAP12]
Length = 159
Score = 43.3 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+++R GN I+ +M + + + +G P +G+ G + GI+
Sbjct: 23 FKEFVRARKQGNVVIEPIQRVMQISHAKEAEKLEQHLPFFASVGSIAPYVGLFGTVWGIM 82
Query: 186 KAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ +
Sbjct: 83 TSFQALGHAQQATIAMVAPGISEALVATALGLFTA 117
>gi|269119207|ref|YP_003307384.1| MotA/TolQ/ExbB proton channel [Sebaldella termitidis ATCC 33386]
gi|268613085|gb|ACZ07453.1| MotA/TolQ/ExbB proton channel [Sebaldella termitidis ATCC 33386]
Length = 235
Score = 43.3 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G+ +E + E + K ++ + P +G++G + G+I A LS
Sbjct: 90 GDFDPRYLEEIAKETTLEQITRLEKGMWLLNIVATVSPQLGLLGTVTGMIMAFKGLSGAG 149
Query: 194 --SPKILGTAIGVSLTGTLLGI------ILSYSLC 220
I+ I +L T G+ +++Y+
Sbjct: 150 GADSTIIAAGISEALYTTAFGLIVGIPALIAYNFF 184
>gi|163738346|ref|ZP_02145761.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis BS107]
gi|163742237|ref|ZP_02149625.1| proton transporter TolQ [Phaeobacter gallaeciensis 2.10]
gi|161384567|gb|EDQ08948.1| proton transporter TolQ [Phaeobacter gallaeciensis 2.10]
gi|161388267|gb|EDQ12621.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis BS107]
Length = 231
Score = 43.3 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
IE MD I ++ +G + P +G+ G + GI+ A +++ + +
Sbjct: 115 RIERSMDVAIAKESEHVQSGLSILATVGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T LG++ + +++ + + Y
Sbjct: 175 VAPGIAEALMATGLGLLAAIPAVI-FYNKLSADSDRIIGSYE 215
>gi|325291602|ref|YP_004277466.1| biopolymer transport protein [Agrobacterium sp. H13-3]
gi|325059455|gb|ADY63146.1| biopolymer transport protein [Agrobacterium sp. H13-3]
Length = 387
Score = 43.3 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D + G + + + + A++ +G + P +G+ G + GI+
Sbjct: 237 LSDAVVEHTDGGGIKERVSSALSRIETHAGRRMSRGTGALATIGSTAPFVGLFGTVWGIM 296
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ ++S+ + ++ I +L T +G++ +
Sbjct: 297 NSFISISESQTTNLAVVAPGIAEALLATAIGLVAA 331
>gi|304382646|ref|ZP_07365140.1| MotA/TolQ/ExbB proton channel family protein [Prevotella marshii
DSM 16973]
gi|304336271|gb|EFM02513.1| MotA/TolQ/ExbB proton channel family protein [Prevotella marshii
DSM 16973]
Length = 288
Score = 43.3 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q SP I+ + + V+L T+ GII
Sbjct: 188 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQQAGDISPTIVASGMKVALITTIFGII 247
Query: 215 LS---YSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
++ N + S+I+ + I + A+
Sbjct: 248 VALILQVFYNYILSKIEHLTAQMEESAIALLDAI 281
>gi|225851487|ref|YP_002731721.1| MotA/TolQ/ExbB proton channel family protein [Persephonella marina
EX-H1]
gi|225645187|gb|ACO03373.1| MotA/TolQ/ExbB proton channel family protein [Persephonella marina
EX-H1]
Length = 213
Score = 43.3 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIV 178
N+ T+ I + I G ++ +E + + + +A+ + P +G +
Sbjct: 70 NSVATSLIAGILEAFIKGRRSENDLRLAAEEAARMEIPKLEGYVNAMGAIAAIAPILGFL 129
Query: 179 GAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
G + G+I+ LS +P++L I +L T G+ ++
Sbjct: 130 GTVTGMIQVFEALSLEGLSNPELLSKGISQALITTAFGLSIA 171
>gi|323698829|ref|ZP_08110741.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323458761|gb|EGB14626.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 481
Score = 43.3 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
+A + + E L+ I+ M P +G++G + G+I + + +
Sbjct: 356 DADPELRDKRLQEGFLAELHRLESGLGFIAVMAAVAPLLGLLGTVTGMIDSFQAVTVFGT 415
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
+P+I+ + I +L T G+ ++
Sbjct: 416 ANPRIMSSGISEALITTQAGLGVA 439
>gi|89075794|ref|ZP_01162182.1| Putative TolQ protein [Photobacterium sp. SKA34]
gi|89048526|gb|EAR54101.1| Putative TolQ protein [Photobacterium sp. SKA34]
Length = 229
Score = 43.3 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQSP-KILGTAI 202
M + + E ++ +G P IG+ G +LGI+ A+G + Q + I
Sbjct: 113 MRVSLSKEVDELETNLPFLATVGSISPYIGLFGTVLGIMTAFIALGAMKQPTLATVAPGI 172
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ + K Y + + ++
Sbjct: 173 AGALIATAMGLFAAIPAVM-FYNRLTNKVSKLEHTYATFMEEFSSILHRQA 222
>gi|50119868|ref|YP_049035.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
gi|49610394|emb|CAG73838.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
Length = 222
Score = 43.0 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + + P +G++G I+GII LS P + +G +L T LGI ++
Sbjct: 108 ILETVVTAAPLLGLLGTIMGIIDTFKALSAAGISDPSQVSAGMGTALYATGLGIAIA 164
>gi|227329772|ref|ZP_03833796.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 222
Score = 43.0 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + + P +G++G I+GII+ LS P + +G +L T LGI ++
Sbjct: 108 VLETVVTAAPLLGLLGTIMGIIETFKALSAAGISDPSQVSAGMGTALYATGLGIAIA 164
>gi|227113639|ref|ZP_03827295.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 227
Score = 43.0 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + + P +G++G I+GII+ LS P + +G +L T LGI ++
Sbjct: 108 ILETVVTAAPLLGLLGTIMGIIETFKALSAAGISDPSQVSAGMGTALYATGLGIAIA 164
>gi|260889990|ref|ZP_05901253.1| MotA/TolQ/ExbB proton channel family protein [Leptotrichia
hofstadii F0254]
gi|260860596|gb|EEX75096.1| MotA/TolQ/ExbB proton channel family protein [Leptotrichia
hofstadii F0254]
Length = 208
Score = 43.0 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 85 LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIE 144
L L+ GSR E D +S + S+ ++ N ++ + N+ IE
Sbjct: 48 LYKALRTGSREEILKLCKDKTDS-VSKSVTKIVSNTDIN--------FDELDNSHRQVIE 98
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS----PKILGT 200
++ E I + K + + + P +G++G + G+I A L+++ KI+
Sbjct: 99 GIISESILEQTTKLEKGMSLLGTVVNAAPQLGLLGTVTGMIAAFSALTRNGTSTAKIVAG 158
Query: 201 AIGVSLTGTLLGIILS 216
I +L T G+I++
Sbjct: 159 GISEALYTTAFGLIVA 174
>gi|88857265|ref|ZP_01131908.1| putative Tol protein [Pseudoalteromonas tunicata D2]
gi|88820462|gb|EAR30274.1| putative Tol protein [Pseudoalteromonas tunicata D2]
Length = 455
Score = 43.0 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEI-DIILYEKLKPYHAISHM---GESLPAIGIVGAILGIIK 186
R++ V + + ++ ++ + IL E K ++ + P +G++G + G+I
Sbjct: 325 RVMKVKDQFPNVAYDTLELKLSEAILREMPKITRNLTFIKIISVVAPLLGLLGTVTGMIN 384
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ PK++ I +L T+LG++++
Sbjct: 385 TFQAITLFGTGDPKLMAGGISQALVTTVLGLVVA 418
>gi|261416129|ref|YP_003249812.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372585|gb|ACX75330.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327132|gb|ADL26333.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 188
Score = 43.0 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 54/131 (41%), Gaps = 6/131 (4%)
Query: 109 IFTSIPTVLENNELTTFICDY-MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH 167
I+ I ++ N + + D + ++ N + I + EI + K + +
Sbjct: 30 IWKVISLIVFNKTVQPRLTDKVIHRVVTCNTDHHIITESIRTEIGLAFSPLTKGLTTVEN 89
Query: 168 MGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
+ P +G++G ++GI A ++ P T I +L T+LG++++
Sbjct: 90 IASISPMLGLLGTVVGIFNAFTVIAASGLDDPSAFATGIKFALVTTVLGLVVAIPHVIAF 149
Query: 224 TSQIKSTRLKQ 234
+ + + ++
Sbjct: 150 -NYLNARMEQE 159
>gi|153003268|ref|YP_001377593.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152026841|gb|ABS24609.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 229
Score = 43.0 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK-- 196
+I+ ++ E + + + +G P IG+ G ++GI++A +++ + +
Sbjct: 95 DPEKIDAAVERERQQMNLRLRRNVWVLGTVGAIAPFIGLFGTVVGIMQAFRHMAATGQGG 154
Query: 197 --ILGTAIGVSLTGTLLGIILS 216
++ + I +L T GI ++
Sbjct: 155 FTVVASGISEALVATAGGIAVA 176
>gi|253990436|ref|YP_003041792.1| colicin uptake protein TolQ [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781886|emb|CAQ85050.1| tolq protein [Photorhabdus asymbiotica]
Length = 231
Score = 43.0 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G +R+ I M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 104 VVTGASRAMRIS--MNRELETL--ESHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + +A
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFLAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|163751085|ref|ZP_02158315.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
gi|161329041|gb|EDQ00113.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
Length = 284
Score = 43.0 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 140 SYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E L + + IL E I + P +G++G + G+I ++ +
Sbjct: 163 DVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGT 222
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
PK++ I ++L T+ G++ + L + + + + ++ ++A
Sbjct: 223 SDPKLMAGGISMALMTTVQGLVAALPLML-MHAIVIARSKSIVQVLEEQSAGMVAS 277
>gi|90580124|ref|ZP_01235932.1| Putative TolQ protein [Vibrio angustum S14]
gi|90439009|gb|EAS64192.1| Putative TolQ protein [Vibrio angustum S14]
Length = 229
Score = 43.0 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQSP-KILGTAI 202
M + + E ++ +G P IG+ G +LGI+ A+G + Q + I
Sbjct: 113 MRVSLSKEVDELETNLPFLATVGSISPYIGLFGTVLGIMTAFIALGAMKQPTLATVAPGI 172
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ + K Y + + ++
Sbjct: 173 AGALIATAMGLFAAIPAVM-FYNRLTNKVSKLEHTYATFMEEFSSILHRQA 222
>gi|124267669|ref|YP_001021673.1| putative biopolymer transport exbB-like transmembrane protein
[Methylibium petroleiphilum PM1]
gi|124260444|gb|ABM95438.1| putative biopolymer transport exbB-like transmembrane protein
[Methylibium petroleiphilum PM1]
Length = 213
Score = 43.0 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYE-IENLMDEEIDIILYEKLKPYHAISHMGESLP 173
+ N+ L + + +R +I + + + + ++ + + + + + P
Sbjct: 63 KLSANSVLGSVLASGLRAVIADPRITEDGLRIAFETAGRAAVHRLERYLNTLGTIASAAP 122
Query: 174 AIGIVGAILGIIKAMGN--------LSQSPKILGTAIGVSLTGTLLGIILS 216
+G+ G ++G+I+ G+ + +P+ L I ++L T G++++
Sbjct: 123 LLGLFGTVVGMIEIFGSQAPATTAGVGGNPEQLAHGISIALYNTAFGLVVA 173
>gi|297537933|ref|YP_003673702.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297257280|gb|ADI29125.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 569
Score = 43.0 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 45/135 (33%), Gaps = 8/135 (5%)
Query: 86 MYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN 145
+ + P NS++F + + + + + I+
Sbjct: 401 FQKTSGDDLLSLDKGANYP-NSSLFKLYQAGVREMKKRQHEGEKLSLSGASMD---AIKA 456
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTA 201
+D ++ + ++ P +G++G ++G++ + + +
Sbjct: 457 AIDADLVRETQRQNAGMVLLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPG 516
Query: 202 IGVSLTGTLLGIILS 216
I +L T+ G+ ++
Sbjct: 517 IAAALLATVAGLAVA 531
>gi|289665893|ref|ZP_06487474.1| biopolymer transport protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669016|ref|ZP_06490091.1| biopolymer transport protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 220
Score = 43.0 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
V I +++ +++ + + + + + P +G++G ++G+I+ +
Sbjct: 80 VRGRPRELIRERIEDTGRHVVHRMERYLNTLGTIASAGPLLGLLGTVVGMIQMFLGILDH 139
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
L IG +L T G+I++
Sbjct: 140 GVGDVNQLAGGIGKALVCTATGMIIA 165
>gi|237737526|ref|ZP_04568007.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
gi|229419406|gb|EEO34453.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
Length = 204
Score = 43.0 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 7/146 (4%)
Query: 78 VLKLLYILMYNLKKGS---RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMII 134
+ +L + KK RN ++ I + N I +I + ++
Sbjct: 23 LTIILDRAFFFFKKEGTHNRNFEKDIIKEVQNGNIDGAISICEKEKNSVGYVVKGFLTRC 82
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL--- 191
N + + L+ E + + H + +G +G++G + G+IKA NL
Sbjct: 83 EKNMDFHYYDQLLKEIAFDEISSLERRLHLLGLIGNMATMVGLLGTVTGMIKAFKNLATF 142
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILS 216
+ P I+ I +L T G+I++
Sbjct: 143 GAGDPTIVAGGISEALITTASGLIIA 168
>gi|327539542|gb|EGF26152.1| biopolymer transport ExbB-related protein [Rhodopirellula baltica
WH47]
Length = 351
Score = 43.0 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----I 197
EIE + + D + + + P IG++G +LG+I+A ++ +
Sbjct: 221 EIEQAVIDAGDRVGDSLRRFLRVFHAISNVTPLIGLLGTVLGMIQAFETIADPSAGESDL 280
Query: 198 LGTAIGVSLTGTLLGIIL---SYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
L + I +L T G+ + +Y ++ + +L V + A
Sbjct: 281 LASGISTALMTTAGGLSVAIPAYLAYMYFGAKSDGYLGEIDKLCQRVIDCISA 333
>gi|301061889|ref|ZP_07202619.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300443993|gb|EFK08028.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 460
Score = 43.0 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 38/107 (35%), Gaps = 5/107 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
IE+ + E + + A+ P +G++G + G+I + +
Sbjct: 333 EDSREVIESSLSEAMLREAPRLERFLGALKACAAVAPLLGLLGTVTGMINTFQVITTHGT 392
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
P+++ I ++ T +G+ ++ + + + +
Sbjct: 393 GDPRLMAGGISEAMVTTQVGLAVAIPVMI-FAAFLGRRARNLSQDME 438
>gi|303235536|ref|ZP_07322145.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella disiens FB035-09AN]
gi|302484273|gb|EFL47259.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella disiens FB035-09AN]
Length = 284
Score = 43.0 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ + + SP I+ + + V+L T+ GII
Sbjct: 184 EKGCSWITLFIAMAPSLGFLGTVIGMVMSFDQIQMAGDISPTIVASGMKVALITTIFGII 243
Query: 215 LS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
++ N + S+I+ + I + ++
Sbjct: 244 VALVLQIFYNYILSKIEHLTAQMEESAISLLDGIL 278
>gi|254502128|ref|ZP_05114279.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
gi|222438199|gb|EEE44878.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
Length = 211
Score = 43.0 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPK 196
EIE + + L+ K A+ + + P IG+ G +LG+I+A L + P
Sbjct: 79 EIEERVGVQATGDLHHFAKGVRALEAIAQVAPLIGLFGTVLGMIEAFQALQYAGSNVDPS 138
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
L I V+L T G+ ++ + + + ++ + + AL+
Sbjct: 139 ALAGGIWVALMTTAAGLAVAMPVSL-VVTWLEGRLEAERIAIETLTSALL 187
>gi|307294756|ref|ZP_07574598.1| protein TolQ [Sphingobium chlorophenolicum L-1]
gi|306879230|gb|EFN10448.1| protein TolQ [Sphingobium chlorophenolicum L-1]
Length = 235
Score = 43.0 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 12/192 (6%)
Query: 35 VIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSR 94
+ V A + +PL + + + + + L ++ + + SR
Sbjct: 6 LAVGSAAQAATI--SPLALFLQADIVVKVVMLGLLLASIWTWAMIIGFSFTLRKASRQSR 63
Query: 95 NET-----ENHIDDPYNSTIFTSIPTV-LENNELTTFICDYMRMIIVGNARSYEIENLMD 148
ID Y + + P + +T + + +I + M
Sbjct: 64 AFEQDFWKAEDIDRFYEARGKSEFPAARVMAAGVTEWRRSTAQKVIDREGTRDRLSTAMS 123
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGV 204
I + + ++ +G P +G+ G + GI++A ++ + S ++ I
Sbjct: 124 STIAAEVDRLSDRLNILATIGSVAPFVGLFGTVWGIMRAFTSIAAEQNSSLAVVAPGIAE 183
Query: 205 SLTGTLLGIILS 216
+L T +G+ +
Sbjct: 184 ALFATAIGLFAA 195
>gi|163856981|ref|YP_001631279.1| biopolymer transport protein [Bordetella petrii DSM 12804]
gi|163260709|emb|CAP43011.1| biopolymer transport protein [Bordetella petrii]
Length = 206
Score = 43.0 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEID-IILYEKLKPYHAISHMGESL 172
P L E + + + ++ + ++++ E++ + ++ + A+ +
Sbjct: 58 PQALARLERNSPLGRVLAEVLRQRHQPHDLQRAAIEDVGRAVAHDLNRYIPALGTVAVIA 117
Query: 173 PAIGIVGAILGIIKAMGNL---SQSPKILGTAIGVSLTGTLLGIILS 216
P +G+ G ++G+I+ G+ P L I ++L T GI+++
Sbjct: 118 PLMGLFGTVVGMIEIFGSYTPSGGDPAQLARGISIALYNTAFGILIA 164
>gi|87308223|ref|ZP_01090365.1| hypothetical protein DSM3645_21537 [Blastopirellula marina DSM
3645]
gi|87289305|gb|EAQ81197.1| hypothetical protein DSM3645_21537 [Blastopirellula marina DSM
3645]
Length = 564
Score = 43.0 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 85/234 (36%), Gaps = 27/234 (11%)
Query: 8 FITILCIIGGFYAMGGNPYILIQPFEIVIVA----GAGLGGFVMANPLKVIKDSGVSLLE 63
+ I GF+A +L P + + G G ++ + +++L
Sbjct: 123 VGLVGSGIFGFFAAVTFLLLLW-PSKGTYIGDLFLAGGFQGVMIQFLSTFMFFWAMAILW 181
Query: 64 IFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELT 123
K Q Y + L + ++ + + +D+ +P + L
Sbjct: 182 KKNRKIKRQRDYLLMDVLPTDISPEIR---FDTLDRFVDNIRQ------LPGEHGESFLI 232
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+ ++ V + + +M + +I Y AI + ++P +G +G +LG
Sbjct: 233 NRVLRGLQHFRVRRNAAETV-TMMASQSEIDSNNVASSYTAIKVLIWAIPTMGFIGTVLG 291
Query: 184 IIKAMGNL-----SQSPKILG-------TAIGVSLTGTLLGIILSYSLCNPLTS 225
I A+ +L P L + +G + TL+ +++S + P++S
Sbjct: 292 ISLAVASLAGALGGNDPSQLMTSLTSMFSGLGTAFNTTLVALVMSMIIKFPMSS 345
>gi|71908823|ref|YP_286410.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
gi|71848444|gb|AAZ47940.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
Length = 201
Score = 43.0 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G +M E I+ + +E + + + P +G+ G ++G+I+
Sbjct: 72 RVLSAGLRNVNSTREIMKESIEEAGSAVSHELNRYLTTLGTIASISPLMGLFGTVVGMIE 131
Query: 187 AMGNLS---QSPKILGTAIGVSLTGTLLGIILS 216
G+ S +P L I V+L T G++++
Sbjct: 132 IFGSQSPSGANPMQLAHGISVALYNTGFGLVIA 164
>gi|254293842|ref|YP_003059865.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
gi|254042373|gb|ACT59168.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
Length = 222
Score = 43.0 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
M + + I ++ E + + + + + + P +G+ G +LG+I+A
Sbjct: 83 MIQLGMSLHGRENINKRLESEAEQAFQPFERGFRTLDMVAQLAPLLGLFGTVLGMIEAFR 142
Query: 190 NLSQ-----SPKILGTAIGVSLTGTLLGIILS 216
L P IL I V+L T G+ ++
Sbjct: 143 ALQGAGSQVDPAILAGGIWVALMTTAAGLAVA 174
>gi|296124040|ref|YP_003631818.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296016380|gb|ADG69619.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 324
Score = 43.0 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE-NNELTTFICDYMRMIIVG 136
++ L+ +L ++K + + ++D P E +F+ + +
Sbjct: 118 MVALIMMLFLQIRKVNYIPAD-FVEDFEEKLNARDYPGAYELAKSDDSFVARVLAAGMAR 176
Query: 137 NARSYE-IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
AR YE +EN M E D + ++ +G P +G++G + G++ + ++ S
Sbjct: 177 LARGYEEVENAMQEVGDDEALGMEQKIGYLALIGSVAPMLGLLGTVQGMVLSFQVIATST 236
Query: 195 ----PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
P L I +L TL G+I++ T K+ + ++ + L++ +
Sbjct: 237 QQPKPYELADGIATALFTTLEGLIVAIPAIVAFT-VYKNRFARFMFEASVISEGLMSRFS 295
Query: 251 GAIPQ 255
G PQ
Sbjct: 296 GMKPQ 300
>gi|270340065|ref|ZP_06006927.2| MotA/TolQ/ExbB proton channel family protein [Prevotella bergensis
DSM 17361]
gi|270332840|gb|EFA43626.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bergensis
DSM 17361]
Length = 290
Score = 43.0 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + SP I+ + + V+L T+ GII
Sbjct: 188 EKGCSWITLFIVMAPSLGFLGTVIGMVMAFDQIQTAGDISPTIVASGMKVALITTIFGII 247
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I+ +
Sbjct: 248 VALILQIFYNYILSKIEHLTSQ 269
>gi|32471265|ref|NP_864258.1| biopolymer transport ExbB-related protein [Rhodopirellula baltica
SH 1]
gi|32396967|emb|CAD71937.1| probable biopolymer transport ExbB-related protein [Rhodopirellula
baltica SH 1]
Length = 351
Score = 43.0 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----I 197
EIE + + D + + + P IG++G +LG+I+A ++ +
Sbjct: 221 EIEQAVIDAGDRVGDSLRRFLRVFHAISNVTPLIGLLGTVLGMIQAFETIADPSAGESDL 280
Query: 198 LGTAIGVSLTGTLLGIIL---SYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
L + I +L T G+ + +Y ++ + +L V + A
Sbjct: 281 LASGISTALMTTAGGLSVAIPAYLAYMYFGAKSDGYLGEIDKLCQRVIDCISA 333
>gi|328542541|ref|YP_004302650.1| Protein transporter [polymorphum gilvum SL003B-26A1]
gi|326412287|gb|ADZ69350.1| Protein transporter protein [Polymorphum gilvum SL003B-26A1]
Length = 235
Score = 43.0 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ +MD I + ++ +G + P IG+ G + GI+ + + S +
Sbjct: 115 QQRIDRVMDVTIQREIERLEARLLILATVGSAAPFIGLFGTVWGIMTSFQAIAASESTNL 174
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 175 AVVAPGIAEALFATALGLLAA 195
>gi|150397828|ref|YP_001328295.1| Tol-Pal system TolQ [Sinorhizobium medicae WSM419]
gi|150029343|gb|ABR61460.1| Tol-Pal system TolQ [Sinorhizobium medicae WSM419]
Length = 239
Score = 43.0 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 111 QMRIDRAMDVTLARESEALEARLGSLATIGSAAPFIGLFGTVVGIMTSFQAIAGSKSTNL 170
Query: 196 KILGTAIGVSLTGTLLGII------LSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ I +L T +G++ ++Y+ ++ + + +
Sbjct: 171 AVVAPGIAEALLATAIGLLAAIPAVIAYNKFTADAGKLSARMEAFADEFSAIL 223
>gi|317061659|ref|ZP_07926144.1| MotA/TolQ/ExbB proton channel family protein [Fusobacterium sp.
D12]
gi|313687335|gb|EFS24170.1| MotA/TolQ/ExbB proton channel family protein [Fusobacterium sp.
D12]
Length = 217
Score = 43.0 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-- 192
+ +E+L+ + + + + +S + P +G++G I G++ + L+
Sbjct: 91 MKEDIGKRLESLVYSKAERAIDGMEQHLDYLSVIIGLAPMLGLLGTITGMMSSFNALNER 150
Query: 193 -QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
Q+P + IG +L T+ G+ ++ L + + + S + + L+ M
Sbjct: 151 LQNPMAVTAGIGEALITTVFGLCIA-ILGMCIHAYLSSKVKTASLNLSEISEVLVDIME 208
>gi|15966495|ref|NP_386848.1| putative transport transmembrane protein [Sinorhizobium meliloti
1021]
gi|307300468|ref|ZP_07580248.1| protein TolQ [Sinorhizobium meliloti BL225C]
gi|307318333|ref|ZP_07597768.1| protein TolQ [Sinorhizobium meliloti AK83]
gi|15075766|emb|CAC47321.1| Putative transport transmembrane protein [Sinorhizobium meliloti
1021]
gi|306896015|gb|EFN26766.1| protein TolQ [Sinorhizobium meliloti AK83]
gi|306904634|gb|EFN35218.1| protein TolQ [Sinorhizobium meliloti BL225C]
Length = 239
Score = 43.0 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 111 QMRIDRAMDVTLARESEALEARLGSLATIGSAAPFIGLFGTVVGIMTSFQAIAGSKSTNL 170
Query: 196 KILGTAIGVSLTGTLLGII------LSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ I +L T +G++ ++Y+ ++ + + +
Sbjct: 171 AVVAPGIAEALLATAIGLLAAIPAVIAYNKFTADAGKLTARMEAFADEFSAIL 223
>gi|332531104|ref|ZP_08407020.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
gi|332039450|gb|EGI75860.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
Length = 223
Score = 43.0 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 138 ARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ + E+ + E ++ ++ ++ + A++ + P +G+ G ++G+I+ G+
Sbjct: 89 STAEELRTALREAVEDSGRLVAHKLERYLSALATIASIAPLLGLFGTVIGMIEIFGSQAP 148
Query: 192 -----SQSPKILGTAIGVSLTGTLLGIILS 216
+P L I ++L T G++++
Sbjct: 149 TNASGGGNPAQLAHGISIALYNTAFGLVIA 178
>gi|149175428|ref|ZP_01854049.1| probable biopolymer transport protein [Planctomyces maris DSM 8797]
gi|148845696|gb|EDL60038.1| probable biopolymer transport protein [Planctomyces maris DSM 8797]
Length = 492
Score = 43.0 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN-- 190
+ G +++ + ++ + Y I + ++P IG +G ++GI A+ N
Sbjct: 139 YVKGRRSVQDLDEHLKYLAELASEQMHASYSLIRTITWAVPIIGFLGTVIGITIAIANVT 198
Query: 191 ---LSQSPKILGTAIGVSLTGT--LLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
L S + + V+ T LG+ L + +++ +L+Q L+ I
Sbjct: 199 PDQLDTSLSEVTGGLAVAFDTTALALGLSLILVFSTFIVERMEQKQLEQIELFGI 253
>gi|82702158|ref|YP_411724.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82410223|gb|ABB74332.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
Length = 203
Score = 43.0 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
++ G +M E I+ + ++ + + +G P +G++G ++G+I+
Sbjct: 72 QIFSAGLKNDTSTREVMKESIEEAGRAVAHQLERYLTTLGTIGSISPLMGLLGTLVGMIE 131
Query: 187 AMGN----LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
G+ +P L I V+L GI+++ ++ + +
Sbjct: 132 IFGSNTPVSGNNPAQLAHGISVALYNAAFGILVAIPSIM-FYRYFRAKVDELVVEMELQA 190
Query: 243 KALIAYMNGA 252
L+ ++G
Sbjct: 191 LKLVEIIHGD 200
>gi|71909665|ref|YP_287252.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
gi|71849286|gb|AAZ48782.1| Cell division and transport-associated protein TolQ [Dechloromonas
aromatica RCB]
Length = 225
Score = 43.0 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%)
Query: 99 NHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK 158
+++ YNS + ++ ++ N +I + + +
Sbjct: 63 GDLNNLYNSAVNDRHHAGSMERIFEAGFREFTKLKGQKNLDPKDIVDGSRRAMRATYQRE 122
Query: 159 LKPYHA----ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTL 210
+ + ++ +G P IG+ G + GI+ A LS + + I +L T
Sbjct: 123 MDALESHLSFLASVGSVSPYIGLFGTVWGIMHAFRGLSNVGQATLASVAPGIAEALVATA 182
Query: 211 LGIILS 216
+G+ +
Sbjct: 183 IGLFAA 188
>gi|77459960|ref|YP_349467.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77383963|gb|ABA75476.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 234
Score = 43.0 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
RS +E + ++I ++ +G + P IG+ G + GI++A+ ++ S S
Sbjct: 98 RSDRLERNLRQQIQKERRSLENGQAILASIGSTAPFIGLFGTVWGIMEALQSIGASGSAS 157
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 158 LETVAGPIGHALIATGVGIAVA 179
>gi|121998038|ref|YP_001002825.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121589443|gb|ABM62023.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
Length = 210
Score = 43.0 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G A + ++M E I+ + + + + + P +G++G ++G+IK
Sbjct: 72 RILAAGLANRHHGRSVMAEAIEDAGRHEAHRLERYLNTLGTIAAISPLLGLLGTVIGMIK 131
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
G +S L I +L T G+ ++
Sbjct: 132 VFGAISAEGLGDMAALSGGIAEALITTASGLTIA 165
>gi|157828297|ref|YP_001494539.1| tolQ protein [Rickettsia rickettsii str. 'Sheila Smith']
gi|165933001|ref|YP_001649790.1| TolQ [Rickettsia rickettsii str. Iowa]
gi|13235464|emb|CAC33699.1| TolQ protein [Rickettsia rickettsii]
gi|157800778|gb|ABV76031.1| tolQ protein [Rickettsia rickettsii str. 'Sheila Smith']
gi|165908088|gb|ABY72384.1| TolQ [Rickettsia rickettsii str. Iowa]
Length = 241
Score = 43.0 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I +M + + + K ++ +G S P +G+ G + GI+ + ++ + S
Sbjct: 121 ERITGVMYLAQNREVEKLEKNLSFLATVGSSAPFVGLFGTVWGIMHSFQSIATSKNTSLA 180
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ +
Sbjct: 181 VVAPGIAEALLATAIGLFAA 200
>gi|332526255|ref|ZP_08402384.1| putative biopolymer transport exbB-like transmembrane protein
[Rubrivivax benzoatilyticus JA2]
gi|332110089|gb|EGJ10717.1| putative biopolymer transport exbB-like transmembrane protein
[Rubrivivax benzoatilyticus JA2]
Length = 212
Score = 43.0 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+ + M+ ++ + + + + + P +G+ G ++G+I+ G+ +
Sbjct: 87 IQEQALRQAMENAGRTAVHTTERYLNTLGTIAAAAPLLGLFGTVIGMIEIFGSQAPTGAT 146
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+P++L I V+L T G+I++
Sbjct: 147 NPQMLAHGISVALYNTAFGLIIA 169
>gi|87198415|ref|YP_495672.1| MotA/TolQ/ExbB proton channel [Novosphingobium aromaticivorans DSM
12444]
gi|87134096|gb|ABD24838.1| Cell division and transport-associated protein TolQ
[Novosphingobium aromaticivorans DSM 12444]
Length = 227
Score = 43.0 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R + +A I ++++ I+ + + + ++ +G P +G+ G + GI+++ +
Sbjct: 99 RASLDKDAARERIADVLEGAIEGEVDRLSERLNYLATIGSIAPFVGLFGTVWGIMRSFTS 158
Query: 191 L----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + S ++ I +L T +G+ +
Sbjct: 159 IAASQNTSLSVVAPGIAEALLATAIGLFAA 188
>gi|332974346|gb|EGK11276.1| TolQ colicin import protein [Psychrobacter sp. 1501(2011)]
Length = 246
Score = 43.0 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 57/155 (36%), Gaps = 16/155 (10%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNST--IFTSIPTVLENNELTTF-------ICD 128
VL + I + + G+ + H ++ + S + + + + +
Sbjct: 33 VLCWVLIFRLSARLGTAKRQDQHFENWFWSGEDLAKMYQGIQNSPDRHGLANIFYVGFSE 92
Query: 129 YMRMIIVGNARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
++RM + + I+ + + + ++ +G P IG+ G + GI+
Sbjct: 93 FLRMNKKRQPKDHIIDGVERKLRVGLGRQQQSLESGLAVLASIGSVSPYIGLFGTVWGIM 152
Query: 186 KAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
A LS++ + I +L T +G+ +
Sbjct: 153 NAFIGLSEASQVSLSAVAPGIAEALIATAMGLFAA 187
>gi|325526504|gb|EGD04068.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Burkholderia sp. TJI49]
Length = 197
Score = 43.0 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 54/147 (36%), Gaps = 5/147 (3%)
Query: 75 YCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTS-IPTVLENNELTTFICDYMRMI 133
+ D L++ ++Y L + ID Y F I + + +
Sbjct: 9 FTDALRIGGWVVYPLSALAIVALAIIIDRGYVFWRFARGIHDASRDFPDAHVMRRLGAIF 68
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
G + E +D I + + + + + P +G++G I+G++ + +
Sbjct: 69 EDGGMPLWRAEAKIDAIAQRIERDMSRGLWLLETIVTAAPLLGLLGTIVGMMHSFRLIGG 128
Query: 194 S----PKILGTAIGVSLTGTLLGIILS 216
P + + +L T +G++++
Sbjct: 129 DGLVNPAGVSGGVAQALVATAIGLVIA 155
>gi|238752124|ref|ZP_04613607.1| hypothetical protein yrohd0001_520 [Yersinia rohdei ATCC 43380]
gi|238785866|ref|ZP_04629834.1| hypothetical protein yberc0001_38220 [Yersinia bercovieri ATCC
43970]
gi|238797733|ref|ZP_04641227.1| hypothetical protein ymoll0001_12410 [Yersinia mollaretii ATCC
43969]
gi|238709701|gb|EEQ01936.1| hypothetical protein yrohd0001_520 [Yersinia rohdei ATCC 43380]
gi|238713236|gb|EEQ05280.1| hypothetical protein yberc0001_38220 [Yersinia bercovieri ATCC
43970]
gi|238718374|gb|EEQ10196.1| hypothetical protein ymoll0001_12410 [Yersinia mollaretii ATCC
43969]
Length = 228
Score = 42.6 bits (99), Expect = 0.059, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + + +G P IG+ G + GI+ A +L
Sbjct: 104 VIDGASRAMRIS--MNRELEALETH----IPFLGTVGSISPYIGLFGTVWGIMHAFISLG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + IA
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFIAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|163758793|ref|ZP_02165880.1| putative transport transmembrane protein [Hoeflea phototrophica
DFL-43]
gi|162284083|gb|EDQ34367.1| putative transport transmembrane protein [Hoeflea phototrophica
DFL-43]
Length = 238
Score = 42.6 bits (99), Expect = 0.060, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 111 QMRIDKAMDVTLAREAEHLESKLGSLASIGSAAPFIGLFGTVVGIMTSFQAIAGSKSTNL 170
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 171 AVVAPGIAEALLATAIGLLAA 191
>gi|53805154|ref|YP_113182.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53758915|gb|AAU93206.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 218
Score = 42.6 bits (99), Expect = 0.060, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KIL 198
+E + +++ ++ +G + P +G+ G + GI+ A+ ++S+S +++
Sbjct: 102 LERKLKRQLERESRLSDIGLTVLASIGSTAPFVGLFGTVWGIMHALQDISRSGKASLEVV 161
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
IG +L T +GI ++ ++ +R KQ L I
Sbjct: 162 AGPIGEALIATAIGIAVAVPAVLAYNFLMRQSRRKQQALEI 202
>gi|239996818|ref|ZP_04717342.1| putative Tol protein [Alteromonas macleodii ATCC 27126]
Length = 454
Score = 42.6 bits (99), Expect = 0.060, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
I + P +G++G + G+I ++ PK++ I +L T+LG++++
Sbjct: 362 IIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTALVTTVLGLVVA 418
>gi|312143605|ref|YP_003995051.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
gi|311904256|gb|ADQ14697.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
Length = 232
Score = 42.6 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 136 GNARSYEIENLMDE--EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
+ + ++ E +I EK P + + P +G++G ++GII + L
Sbjct: 102 NSEDPARLREVLQAVGEDEIKKMEKHLP--ILDVVAMISPLLGLLGTVIGIISSFNILGT 159
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILS 216
+P + + I +L T LG+I++
Sbjct: 160 AAGAANPAQISSGIAAALISTALGLIIA 187
>gi|294670981|ref|ZP_06735837.1| hypothetical protein NEIELOOT_02687 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307468|gb|EFE48711.1| hypothetical protein NEIELOOT_02687 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 237
Score = 42.6 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G S P IG+ G + GI A+ N+ Q S + IG +L T G+ +
Sbjct: 127 ALASIGSSAPFIGLFGTVWGIYHALVNIGQSGQVSIAAVAGPIGEALVATAFGLFAA 183
>gi|253997817|ref|YP_003049880.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313199891|ref|YP_004038549.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253984496|gb|ACT49353.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312439207|gb|ADQ83313.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 236
Score = 42.6 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
R +E + ++I ++ +G + P +G+ G + GI+ A+ ++ +
Sbjct: 94 SGERQDLLERSLRQQILKERRSLESGLAILASIGSTSPFVGLFGTVWGIMHALTDIGRLG 153
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
S +++ IG +L T LGI ++
Sbjct: 154 TASLEVVAGPIGEALVATGLGIAVA 178
>gi|171915622|ref|ZP_02931092.1| MotA/TolQ/ExbB proton channel family protein [Verrucomicrobium
spinosum DSM 4136]
Length = 267
Score = 42.6 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 13/135 (9%)
Query: 132 MIIVGNARSYEIENLMDEE----IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
++ V R + + M++ +D ++ + ++ P +G++G + G+I +
Sbjct: 130 LLKVNFERDHANKGSMEQAAGDALDREETRQMAWVNYLNVFATLAPMLGLLGTVTGMIAS 189
Query: 188 MGNLS---QSPKILGTAIGVSLTGT----LLGI--ILSYSLCNPLTSQIKSTRLKQHRLY 238
L+ P L IG ++ T +GI + Y + I S K
Sbjct: 190 FDQLAAGRSEPADLAGGIGEAMITTAGGLFVGIPAMFFYFFFKNRLTSIMSEVQKNAAFV 249
Query: 239 IIVKKALIAYMNGAI 253
I + +A
Sbjct: 250 IDILSGEVALAEDDA 264
>gi|67458896|ref|YP_246520.1| TolQ protein [Rickettsia felis URRWXCal2]
gi|67004429|gb|AAY61355.1| TolQ protein [Rickettsia felis URRWXCal2]
Length = 242
Score = 42.6 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I M + + + K ++ +G S P +G+ G + GI+ + ++ + S
Sbjct: 122 ERITGAMYLAQNREVEKLEKNLSFLATVGSSAPFVGLFGTVWGIMHSFQSIATSKNTSLA 181
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ +
Sbjct: 182 VVAPGIAEALLATAIGLFAA 201
>gi|148260460|ref|YP_001234587.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|326403653|ref|YP_004283735.1| putative MotA/TolQ/ExbB proton channel [Acidiphilium multivorum
AIU301]
gi|146402141|gb|ABQ30668.1| outer membrane transport energization protein ExbB [Acidiphilium
cryptum JF-5]
gi|325050515|dbj|BAJ80853.1| putative MotA/TolQ/ExbB proton channel [Acidiphilium multivorum
AIU301]
Length = 223
Score = 42.6 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+ +A + + MDE I ++ + + + P +G+ G I+G+ A L+
Sbjct: 86 MNDADHAGMNSRMDEAIMLVAPRLDRRMWVLDTIVTLAPLLGLFGTIIGMFHAFSILATP 145
Query: 195 ---PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
P + + +L T GI ++ + + +++ ++ ++ +G
Sbjct: 146 GHAPAEVTGGVADALVATACGIFIA-MIGLATFNMLQNQVRLIIHQLETIRTMVLNRTDG 204
Query: 252 AI 253
A
Sbjct: 205 AP 206
>gi|257452637|ref|ZP_05617936.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|257466494|ref|ZP_05630805.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917651|ref|ZP_07913891.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|317059176|ref|ZP_07923661.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313684852|gb|EFS21687.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313691526|gb|EFS28361.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 202
Score = 42.6 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 141 YEIENLMDEEIDIILYEKL---KPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----Q 193
++++ +I+L + ++ +G P G++G + G+IKA N+S
Sbjct: 86 QDVQDYESIIKEIMLESMSPLDRGLSSLEAIGSLAPMCGLLGTVTGMIKAFINISKMGAG 145
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCN--PLTSQIKSTRLKQH 235
P I+ I +L T G+ ++ + + S+I + R +
Sbjct: 146 DPTIVADGISEALVTTAAGLYVAIPVIAAYNIFSKIAARREDEV 189
>gi|146282309|ref|YP_001172462.1| tolQ protein [Pseudomonas stutzeri A1501]
gi|145570514|gb|ABP79620.1| tolQ protein [Pseudomonas stutzeri A1501]
Length = 237
Score = 42.6 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SP 195
+ +E + I K ++ +G P IG+ G + GI+ + LSQ +
Sbjct: 110 AEGVERSLYVAIAEQEERLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATL 169
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 170 STVAPGIAEALIATAIGLFAA 190
>gi|237756722|ref|ZP_04585222.1| MotA/TolQ/ExbB proton channel family protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691118|gb|EEP60226.1| MotA/TolQ/ExbB proton channel family protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 145
Score = 42.6 bits (99), Expect = 0.066, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS--YS 218
+ + P +G++G ++G+I A L + + AIG++L T +GI LS +
Sbjct: 56 LDFAATTSPLLGLLGTVIGLIIAFQELGKKGVSGAGEISAAIGLALVATAIGIALSLWFY 115
Query: 219 LCNPLTSQIKSTRLKQHRLYIIV 241
L + + + + I++
Sbjct: 116 LWFKFFNSKIQEKKEDIKSRILM 138
>gi|53802322|ref|YP_112972.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53756083|gb|AAU90374.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 218
Score = 42.6 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KIL 198
+E + +++ ++ +G + P +G+ G + GI+ A+ ++S+S +++
Sbjct: 102 LERKLKRQLERESRLSDIGLTVLASIGSTAPFVGLFGTVWGIMHALQDISRSGKASLEVV 161
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
IG +L T +GI ++ ++ +R KQ L I
Sbjct: 162 AGPIGEALIATAIGIAVAVPAVLAYNFLMRRSRRKQQALEI 202
>gi|319790082|ref|YP_004151715.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
gi|317114584|gb|ADU97074.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
Length = 209
Score = 42.6 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS------QSPKILGTAIGVSLTGTL 210
E + ++ + P +G++G ++G++K G L+ +P+ L I +L T+
Sbjct: 106 ELERGMALLATVAAISPLLGLLGTVIGMVKIFGVLTAGGGAIGNPQQLSAGIAEALLTTI 165
Query: 211 LGIILS 216
G++++
Sbjct: 166 FGLVVA 171
>gi|307720699|ref|YP_003891839.1| MotA/TolQ/ExbB proton channel [Sulfurimonas autotrophica DSM 16294]
gi|306978792|gb|ADN08827.1| MotA/TolQ/ExbB proton channel [Sulfurimonas autotrophica DSM 16294]
Length = 188
Score = 42.6 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP---KILGT 200
+ ++ + E K +S + P IG+ G ++ I+ ++ Q+ I+
Sbjct: 80 KEVLGLGMLAATKEATKGLSVLSVFASTSPFIGLFGTVVSILDTFAHIGQNSGGMSIIAA 139
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ +L T GI ++ + +K + + A++A
Sbjct: 140 GVSDALIATASGIFVA-TFAYTYHQILKRKSYEIISYLQMQSDAILA 185
>gi|224367131|ref|YP_002601294.1| TolQ3 [Desulfobacterium autotrophicum HRM2]
gi|223689847|gb|ACN13130.1| TolQ3 [Desulfobacterium autotrophicum HRM2]
Length = 478
Score = 42.6 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEI-DIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIK 186
R + G + M+ + + IL E + + + P +G++G + G+I
Sbjct: 345 RALSAGMDFRTKTRTDMENALQEAILREIPPLERFLSTLGMLAAIAPLMGLLGTVTGMIN 404
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNP 222
++ P+++ I +L T+LG+ ++ +
Sbjct: 405 TFHTITFYGTSDPRMMSGGISEALVTTMLGLCVAIPIMLC 444
>gi|85706714|ref|ZP_01037806.1| proton transporter TolQ [Roseovarius sp. 217]
gi|85668772|gb|EAQ23641.1| proton transporter TolQ [Roseovarius sp. 217]
Length = 231
Score = 42.6 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
I+ MD I ++ +G + P IG+ G + GI+ A +++ + +
Sbjct: 115 RIDRSMDVAIAKESEGLQSGLQVLATVGSTAPFIGLFGTVWGIMHAFIEIAEQQNTNLAV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T LG+I + +++ + + Y
Sbjct: 175 VAPGIAEALLATGLGLIAAIPAVI-FYNKLSADADRIVAGYE 215
>gi|157825551|ref|YP_001493271.1| TolQ protein [Rickettsia akari str. Hartford]
gi|157799509|gb|ABV74763.1| TolQ protein [Rickettsia akari str. Hartford]
Length = 241
Score = 42.6 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I M + + + K ++ +G S P +G+ G + GI+ + ++ + S
Sbjct: 121 ERITGAMYLAQNREVEKLEKNLSFLATVGSSAPFVGLFGTVWGIMHSFQSIATSKNTSLA 180
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ +
Sbjct: 181 VVAPGIAEALLATAIGLFAA 200
>gi|307826392|ref|ZP_07656594.1| protein TolQ [Methylobacter tundripaludum SV96]
gi|307732569|gb|EFO03444.1| protein TolQ [Methylobacter tundripaludum SV96]
Length = 225
Score = 42.6 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARS----YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
RM GN + +M E+ L + ++ +G P IG+ G + GI+
Sbjct: 93 RMRQAGNVEPGVQVESAQRVMRIELSRELERLDEHLAFLATVGSISPYIGLFGTVWGIMN 152
Query: 187 AMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ +L + + I +L T +G+ +
Sbjct: 153 SFMSLGNVKQATLAQVAPGIAEALIATAIGLFAA 186
>gi|294013403|ref|YP_003546863.1| biopolymer transport protein TolQ [Sphingobium japonicum UT26S]
gi|292676733|dbj|BAI98251.1| biopolymer transport protein TolQ [Sphingobium japonicum UT26S]
Length = 239
Score = 42.6 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 12/192 (6%)
Query: 35 VIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSR 94
+ V A + +PL + + + + + L ++ + + SR
Sbjct: 10 LAVGSAAQAATI--SPLALFLQADIVVKVVMLGLLLASIWTWAMIIGFSFTLRKASRQSR 67
Query: 95 NET-----ENHIDDPYNSTIFTSIPTV-LENNELTTFICDYMRMIIVGNARSYEIENLMD 148
ID Y + + P + +T + + +I + M
Sbjct: 68 AFEQDFWKAEDIDRFYEARGKSEFPAARVMAAGVTEWRRSTAQKVIDREGTRDRLSTAMS 127
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGV 204
I + + ++ +G P +G+ G + GI++A ++ + S ++ I
Sbjct: 128 STIAAEVDRLSDRLNILATIGSVAPFVGLFGTVWGIMRAFTSIAAEQNSSLAVVAPGIAE 187
Query: 205 SLTGTLLGIILS 216
+L T +G+ +
Sbjct: 188 ALFATAIGLFAA 199
>gi|112774536|gb|ABI20705.1| putative MotA/TolQ/ExbB proton channel [Delftia sp. AN3]
Length = 263
Score = 42.6 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 55/190 (28%), Gaps = 32/190 (16%)
Query: 34 IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLK 90
++I+ GA + I +L + + + + L ++ K
Sbjct: 52 MLILVGASVA------SWATIFRKSQTLKRVRSLNDGFEQDFWSGTSLNDLYASAAHHAK 105
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
+G E + + N+L MR E
Sbjct: 106 QGGPM--ERIFASGMREYQKLRERRIADVNQLMDGTRRAMRASFQREMDEVE-------- 155
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSL 206
+ +G P +G+ G + G++ A N+ Q + + I +L
Sbjct: 156 ---------SGLSFLGTVGSVSPYVGLFGTVWGVMHAFTGFANMEQITLATVAPGIAEAL 206
Query: 207 TGTLLGIILS 216
T +G+ +
Sbjct: 207 VATAMGLFAA 216
>gi|327480559|gb|AEA83869.1| tolQ protein [Pseudomonas stutzeri DSM 4166]
Length = 237
Score = 42.6 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SP 195
+ +E + I K ++ +G P IG+ G + GI+ + LSQ +
Sbjct: 110 AEGVERSLYVAIAEQEERLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATL 169
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 170 STVAPGIAEALIATAIGLFAA 190
>gi|145588474|ref|YP_001155071.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046880|gb|ABP33507.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 212
Score = 42.6 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGN------LSQSPKILGTAIGVSLTGTLLGIILS 216
A++ + P +G+ G ++G+I+ G+ ++ SP+ L I V+L T G++++
Sbjct: 115 ALATIATVAPLLGLFGTVVGMIEIFGSQGAVNGVAGSPQELAHGISVALYNTAFGLLIA 173
>gi|328675511|gb|AEB28186.1| MotA/TolQ/ExbB proton channel family protein [Francisella cf.
novicida 3523]
Length = 235
Score = 42.6 bits (99), Expect = 0.071, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D + E + + ++ P A++ +G P IG+VG + GI+
Sbjct: 94 LKDTCMLRGDTILEGMERTVSIAIAQEAKELDRKLP--ALATIGAVAPYIGLVGTVWGIM 151
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ ++
Sbjct: 152 SSFNTLGGVEQATISVVAPHIAEALIATALGLFVA 186
>gi|123443149|ref|YP_001007123.1| colicin uptake protein TolQ [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238757965|ref|ZP_04619146.1| hypothetical protein yaldo0001_8410 [Yersinia aldovae ATCC 35236]
gi|238765248|ref|ZP_04626177.1| hypothetical protein ykris0001_32630 [Yersinia kristensenii ATCC
33638]
gi|238790495|ref|ZP_04634264.1| hypothetical protein yfred0001_12250 [Yersinia frederiksenii ATCC
33641]
gi|332160926|ref|YP_004297503.1| colicin uptake protein TolQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|122090110|emb|CAL12973.1| TolQ colicin import protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238696520|gb|EEP89308.1| hypothetical protein ykris0001_32630 [Yersinia kristensenii ATCC
33638]
gi|238703719|gb|EEP96255.1| hypothetical protein yaldo0001_8410 [Yersinia aldovae ATCC 35236]
gi|238721439|gb|EEQ13110.1| hypothetical protein yfred0001_12250 [Yersinia frederiksenii ATCC
33641]
gi|318604833|emb|CBY26331.1| mota/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665156|gb|ADZ41800.1| colicin uptake protein TolQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330864062|emb|CBX74139.1| protein tolQ [Yersinia enterocolitica W22703]
Length = 228
Score = 42.6 bits (99), Expect = 0.071, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + + +G P IG+ G + GI+ A +L
Sbjct: 104 VIDGASRAMRIS--MNRELEALETH----IPFLGTVGSISPYIGLFGTVWGIMHAFISLG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + IA
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFIAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|239814812|ref|YP_002943722.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
gi|239801389|gb|ACS18456.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
Length = 238
Score = 42.6 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 18/180 (10%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
+ ++ L + L++ YK L + + + N+
Sbjct: 20 AVALLLIGMSLASWIVIIIKALDVIKYKRLAKHSQ-------DFWHSEDFATALNKLGKD 72
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
+P+ + + + D + S I + ID
Sbjct: 73 DSNPFRALALEGREAAAHHRNTKAHLHDAL-------DVSDWITRALRNGIDAFTARLQT 125
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI A+ ++S + + IG +L T LG+ ++
Sbjct: 126 GLAILASVGSTAPFIGLFGTVWGIYHALMSISTAGQATIDKVAGPIGEALIMTALGLAVA 185
>gi|251790231|ref|YP_003004952.1| MotA/TolQ/ExbB proton channel [Dickeya zeae Ech1591]
gi|247538852|gb|ACT07473.1| MotA/TolQ/ExbB proton channel [Dickeya zeae Ech1591]
Length = 232
Score = 42.6 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 57/149 (38%), Gaps = 10/149 (6%)
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
+LKL+ + + + ++ + + P L N T + + +
Sbjct: 29 IGLLKLVQYARHRRRNQQFRQLFWQQENIDAALRDVAHPGALANLARATQL--TLERVKD 86
Query: 136 GNARSYEIENLMDEEIDIILYEKLK----PYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+++ ++ + + + + ++ +G + P IG+ G + GI+ A+ +
Sbjct: 87 RITPIAHLQDRVERALQQQIQRERRTLETGLALLASIGTTSPFIGLFGTVWGIMAALQTI 146
Query: 192 SQSPKIL----GTAIGVSLTGTLLGIILS 216
QS IG +L T +GI ++
Sbjct: 147 GQSGSAGLDTVAGPIGNALIATGIGIAVA 175
>gi|254428812|ref|ZP_05042519.1| protein TolQ [Alcanivorax sp. DG881]
gi|196194981|gb|EDX89940.1| protein TolQ [Alcanivorax sp. DG881]
Length = 239
Score = 42.6 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E +M I + ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 107 VERVMQGVISEQEADLEAGLSFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 166
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 167 APGIAEALIATAIGLFAA 184
>gi|37525404|ref|NP_928748.1| colicin uptake protein TolQ [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784832|emb|CAE13745.1| TolQ protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 231
Score = 42.6 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 104 VITGASRAMRIS--MNRELESL--ESHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + +A
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFLAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|227825115|ref|ZP_03989947.1| predicted protein [Acidaminococcus sp. D21]
gi|226905614|gb|EEH91532.1| predicted protein [Acidaminococcus sp. D21]
Length = 217
Score = 42.6 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 130 MRMIIVGNARSYE-IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ I++ +YE +EN + + + + K ++ + P +G++G + G++ +
Sbjct: 78 LATIVMDKHENYEYLENFISYRAERAMDKFEKNLALLNIIITLAPVLGLLGTVTGMMGSF 137
Query: 189 GNL---SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
L Q P + + +L T+ G+++S + + + + L
Sbjct: 138 SKLVERGQDPMAVTAGLAEALITTVFGLVIS-IIAVCILGYFERRMKSITLSIEEMSNTL 196
Query: 246 I 246
+
Sbjct: 197 L 197
>gi|89255757|ref|YP_513119.1| TolQ protein [Francisella tularensis subsp. holarctica LVS]
gi|115314251|ref|YP_762974.1| TolQ protein [Francisella tularensis subsp. holarctica OSU18]
gi|118496962|ref|YP_898012.1| TolQ protein [Francisella tularensis subsp. novicida U112]
gi|156501720|ref|YP_001427785.1| TolQ protein [Francisella tularensis subsp. holarctica FTNF002-00]
gi|167009209|ref|ZP_02274140.1| TolQ protein [Francisella tularensis subsp. holarctica FSC200]
gi|194324191|ref|ZP_03057965.1| TolQ protein [Francisella tularensis subsp. novicida FTE]
gi|208780414|ref|ZP_03247755.1| TolQ protein [Francisella novicida FTG]
gi|224457027|ref|ZP_03665500.1| TolQ protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|254369032|ref|ZP_04985045.1| hypothetical protein FTAG_00872 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370435|ref|ZP_04986440.1| group A colicin translocation [Francisella tularensis subsp.
tularensis FSC033]
gi|254373806|ref|ZP_04989289.1| group A colicin translocation [Francisella novicida GA99-3548]
gi|89143588|emb|CAJ78771.1| TolQ protein [Francisella tularensis subsp. holarctica LVS]
gi|115129150|gb|ABI82337.1| TolQ protein [Francisella tularensis subsp. holarctica OSU18]
gi|118422868|gb|ABK89258.1| group A colicin translocation; tolQ protein [Francisella novicida
U112]
gi|151568678|gb|EDN34332.1| group A colicin translocation [Francisella tularensis subsp.
tularensis FSC033]
gi|151571527|gb|EDN37181.1| group A colicin translocation [Francisella novicida GA99-3548]
gi|156252323|gb|ABU60829.1| tol-pal system component, tolQ [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157121953|gb|EDO66123.1| hypothetical protein FTAG_00872 [Francisella tularensis subsp.
holarctica FSC022]
gi|194321638|gb|EDX19122.1| TolQ protein [Francisella tularensis subsp. novicida FTE]
gi|208743782|gb|EDZ90085.1| TolQ protein [Francisella novicida FTG]
gi|282159131|gb|ADA78522.1| TolQ protein [Francisella tularensis subsp. tularensis NE061598]
gi|328676436|gb|AEB27306.1| MotA/TolQ/ExbB proton channel family protein [Francisella cf.
novicida Fx1]
Length = 235
Score = 42.6 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D + E + + ++ P A++ +G P IG+VG + GI+
Sbjct: 94 LKDTCMLRGDTILEGMERTVSIAIAQEAKELDRKLP--ALATIGAVAPYIGLVGTVWGIM 151
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ ++
Sbjct: 152 SSFNTLGGVEQATISVVAPHIAEALIATALGLFVA 186
>gi|99080190|ref|YP_612344.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
gi|99036470|gb|ABF63082.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
Length = 226
Score = 42.6 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 131 RMIIVGNARSYEIE-NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
R + G + + + D E + + + + + P IG+ G +LG+I+A
Sbjct: 90 RAMQGGAGPDHARQSDRCDAEAEALFSRLETGLGFLDLVAQLAPLIGLFGTVLGMIEAFQ 149
Query: 190 NL-----SQSPKILGTAIGVSLTGTLLGIILS 216
L S P +L I V+L T G+ ++
Sbjct: 150 GLQAAGTSVDPTVLAGGIWVALLTTAAGLAVA 181
>gi|327313225|ref|YP_004328662.1| MotA/TolQ/ExbB proton channel family transporter [Prevotella
denticola F0289]
gi|326946218|gb|AEA22103.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella denticola F0289]
Length = 272
Score = 42.6 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + + SP I+ + V+L T+ GII
Sbjct: 167 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQEAGDISPTIVAAGMKVALITTIFGII 226
Query: 215 LS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
++ N + S+I+ + I + A++
Sbjct: 227 VALVLQVFYNYILSKIEHITAQMEESAISLLDAIM 261
>gi|171059622|ref|YP_001791971.1| protein TolQ [Leptothrix cholodnii SP-6]
gi|170777067|gb|ACB35206.1| protein TolQ [Leptothrix cholodnii SP-6]
Length = 236
Score = 42.6 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 61/183 (33%), Gaps = 15/183 (8%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKG---SRNET 97
FV+ + + ++ + K +G L+ + ++ RN
Sbjct: 12 TQASFVVQLVMATLMLVSLASWAVIFGKLIG-------LRRVRGANDGFEREFWSGRNVQ 64
Query: 98 ENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE 157
E + N+ I + + + + F+ R + + M + +
Sbjct: 65 ELYAHSERNAEIGAPLERIFA-SGMREFLKLRERRVGDAGSLLDGARRAMRASLQREMDA 123
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGI 213
++ +G P +G+ G + GI+ A L+ S + I +L T +G+
Sbjct: 124 VEHNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLANVQQVSLATVAPGIAEALVATAIGL 183
Query: 214 ILS 216
+
Sbjct: 184 FAA 186
>gi|90415822|ref|ZP_01223755.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
gi|90332196|gb|EAS47393.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
Length = 209
Score = 42.6 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
+++ ++E +++E + +S + P IG++G +LG+I+ ++ + +
Sbjct: 90 EIMKDSIEEAAAQVVHELERFLTLLSTIANMAPLIGLLGTVLGMIQVFADIMLFGTGNAA 149
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
L I +L T G+ ++ + HR + ++L+ + G ++
Sbjct: 150 DLAGGISQALITTAAGLTIAIP------------AMISHRYFERHVESLVVQLEGQATKL 197
Query: 257 A 257
Sbjct: 198 V 198
>gi|254491608|ref|ZP_05104787.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463086|gb|EEF79356.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 451
Score = 42.2 bits (98), Expect = 0.077, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 140 SYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
+ ++E L + + IL E + ++ + P +G++G + G+I+ + +
Sbjct: 327 AQDVETLSLKLDEAILRETPRLERGLITLAILAAIAPMLGLLGTVSGMIETFQAITLFGT 386
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
PK++ I +L T LG+ ++ L + S + S + ++ A++A
Sbjct: 387 GDPKLMSGGISQALVTTELGLAVAIPLLL-IHSGLSSKSNRLIQILDEESAAIVA 440
>gi|167646068|ref|YP_001683731.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
gi|167348498|gb|ABZ71233.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
Length = 585
Score = 42.2 bits (98), Expect = 0.077, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I LMD + K ++ P +G++G ++G++ + +
Sbjct: 460 QVIRALMDATLVRENQRLSKSLVVLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVN 519
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+ I +L T+ G+ ++
Sbjct: 520 AIAPGISAALLATVAGLGVA 539
>gi|218781519|ref|YP_002432837.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762903|gb|ACL05369.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 476
Score = 42.2 bits (98), Expect = 0.077, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 144 ENLMDEEIDIILYEKLKPY--------HAISHMGESLPAIGIVGAILGIIKAMGNLS--- 192
+L +++ L E + I+ M P +G++G + G+I ++
Sbjct: 353 RHLERMDMENALQEAILGEIPALERFLSIIAMMAAVAPLLGLLGTVTGMINTFHVITYYG 412
Query: 193 -QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
PK++ I +L T+LG+ + + L + S R++
Sbjct: 413 AGDPKMMSGGISEALLTTMLGLAAAIPIM--LAHTLLSRRIE 452
>gi|251771954|gb|EES52526.1| MotA/TolQ/ExbB proton channel [Leptospirillum ferrodiazotrophum]
Length = 242
Score = 42.2 bits (98), Expect = 0.078, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 113 IPTVLENNELTTFICDY-MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES 171
+ V E+ +FI + +++ + +E L++ E + + + +
Sbjct: 63 LAMVKESYISDSFIVNKILKLFVESELEGENLEYLIEAEAVLEEKKLKERMWILDTAITM 122
Query: 172 LPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
P +G++G I+GI+ + +S P + + +L T G++++
Sbjct: 123 APLLGLLGTIIGIVASFHVMSVSGLGKPTQITGGVAEALIATATGLVIA 171
>gi|187931252|ref|YP_001891236.1| group A colicin translocation; tolQ protein [Francisella tularensis
subsp. mediasiatica FSC147]
gi|187712161|gb|ACD30458.1| group A colicin translocation; tolQ protein [Francisella tularensis
subsp. mediasiatica FSC147]
Length = 235
Score = 42.2 bits (98), Expect = 0.078, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D + E + + ++ P A++ +G P IG+VG + GI+
Sbjct: 94 LKDTCMLRGDTILEGMERTVSIAIAQEAKELDRKLP--ALATIGAVAPYIGLVGTVWGIM 151
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ ++
Sbjct: 152 SSFNTLGGVEQATISVVAPHIAEALIATALGLFVA 186
>gi|51473504|ref|YP_067261.1| TolQ protein [Rickettsia typhi str. Wilmington]
gi|13235454|emb|CAC33747.1| TolQ protein [Rickettsia typhi]
gi|51459816|gb|AAU03779.1| TolQ protein [Rickettsia typhi str. Wilmington]
Length = 241
Score = 42.2 bits (98), Expect = 0.078, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I + M + + + K + ++ +G S P +G+ G + GI+ + ++ + S
Sbjct: 121 ERIMSAMYLAQNREIEKLEKYLNVLATVGSSAPFVGLFGTVWGIMHSFQSIALSKNTSLA 180
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ ++
Sbjct: 181 VVAPGIAEALLATAIGLFVA 200
>gi|157803962|ref|YP_001492511.1| hypothetical protein A1E_03995 [Rickettsia canadensis str. McKiel]
gi|157785225|gb|ABV73726.1| hypothetical protein A1E_03995 [Rickettsia canadensis str. McKiel]
Length = 242
Score = 42.2 bits (98), Expect = 0.079, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I +M + + + K ++ +G S P IG+ G + GI+ + ++ + S +
Sbjct: 123 RITGVMYLAQNREIEKLEKNLSFLATVGSSSPFIGLFGTVWGIMHSFQSIATSKNTSLAV 182
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 183 VAPGIAEALLATAIGLFAA 201
>gi|261855192|ref|YP_003262475.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
gi|261835661|gb|ACX95428.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
Length = 237
Score = 42.2 bits (98), Expect = 0.079, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGV-- 204
+ +ID I + A++ +G P IG+ G + GI A+ N+ Q+ I
Sbjct: 113 LTSKIDDIQEFFRQGMSALASIGAVAPFIGLFGTVWGIYHALENIGQTGSANLATIAGPV 172
Query: 205 --SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
+L T G+ ++ + + R R+ ++ +++G P
Sbjct: 173 GEALVMTAFGLAVAIPAVLAYNAINRQNRQLIARVQRFAQQLHTYHVSGIAP 224
>gi|302325682|gb|ADL24883.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 200
Score = 42.2 bits (98), Expect = 0.080, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N + N M + K I P +G++G + G++ + Q
Sbjct: 79 NDGPVAVRNAMLATRHELDVSLSKSLKTIVTCASIAPLLGLLGTVSGMVHTFETIKQFGF 138
Query: 194 -SPKILGTAIGVSLTGTLLGIILSYSLCN 221
+P +L I +L T G+++++ L
Sbjct: 139 GNPVLLADGISEALLTTQAGLLVAFPLML 167
>gi|254372332|ref|ZP_04987823.1| hypothetical protein FTCG_01399 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570061|gb|EDN35715.1| hypothetical protein FTCG_01399 [Francisella novicida GA99-3549]
Length = 235
Score = 42.2 bits (98), Expect = 0.080, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D + E + + ++ P A++ +G P IG+VG + GI+
Sbjct: 94 LKDTCMLRGDTILEGMERTVSIAIAQEAKELDRKLP--ALATIGAVAPYIGLVGTVWGIM 151
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ ++
Sbjct: 152 SSFNTLGGVEQATISVVAPHIAEALIATALGLFVA 186
>gi|34498803|ref|NP_903018.1| exbB-like biopolymer transport [Chromobacterium violaceum ATCC
12472]
gi|34104655|gb|AAQ61012.1| probable exbB-like biopolymer transport [Chromobacterium violaceum
ATCC 12472]
Length = 204
Score = 42.2 bits (98), Expect = 0.081, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R+ G + +M E I+ + Y+ + + + P +G++G ++G+I+
Sbjct: 72 RLFAAGLRNVHGSREVMKEAIEDEGRQVAYQLERLLTTLGTIAAMAPLLGLLGTVIGMIE 131
Query: 187 AMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
G+ +P+ L I V+L T G+I++
Sbjct: 132 IFGSQNASGANPQQLAHGISVALYNTAFGLIVA 164
>gi|238793894|ref|ZP_04637514.1| hypothetical protein yinte0001_25090 [Yersinia intermedia ATCC
29909]
gi|238726797|gb|EEQ18331.1| hypothetical protein yinte0001_25090 [Yersinia intermedia ATCC
29909]
Length = 228
Score = 42.2 bits (98), Expect = 0.081, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + + +G P IG+ G + GI+ A +L
Sbjct: 104 VIDGASRAMRIS--MNRELEALETH----IPFLGTVGSISPYIGLFGTVWGIMHAFISLG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + IA
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFIAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|110635503|ref|YP_675711.1| MotA/TolQ/ExbB proton channel [Mesorhizobium sp. BNC1]
gi|110286487|gb|ABG64546.1| Cell division and transport-associated protein TolQ [Chelativorans
sp. BNC1]
Length = 243
Score = 42.2 bits (98), Expect = 0.081, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ MD + + ++ +G S P IG+ G ++GI+ + + S + +
Sbjct: 114 RIDKAMDLALTREMERLESKLGFLASVGASAPFIGLFGTVVGIMTSFQAIAGSKSTNLAV 173
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 174 VAPGIAEALLATAIGLLAA 192
>gi|288801375|ref|ZP_06406829.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 299 str. F0039]
gi|288331758|gb|EFC70242.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 299 str. F0039]
Length = 266
Score = 42.2 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 12/155 (7%)
Query: 103 DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY 162
+ + + ++ IC M I E + + +E +
Sbjct: 109 NITSKNLDKALQQCDATRGPVAAICKEGVMRIDQPIEEIERSIVSYGSVQTAYFE--RGC 166
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS-- 216
I P++G +G ++G++ A + SP I+ + + V+L T+ GII++
Sbjct: 167 SWIRLFIAMAPSLGFLGTVIGMVLAFDQIQTAGDISPTIVASGMKVALITTIFGIIVALI 226
Query: 217 -YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
N + S+I + + V L A M
Sbjct: 227 LQLFYNYIISKIDHLTSQ---MEESVMTLLDAIMQ 258
>gi|257455251|ref|ZP_05620486.1| protein TolQ [Enhydrobacter aerosaccus SK60]
gi|257447213|gb|EEV22221.1| protein TolQ [Enhydrobacter aerosaccus SK60]
Length = 242
Score = 42.2 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 24/184 (13%)
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTS--IPTVLENN---------ELTT 124
+ L + + SR D+ + T ++ +PT+ + E
Sbjct: 24 ILLFASLLCWVTIFRLSSRLAIATRADNYFEKTFWSGVELPTLYKGVQGNPDRSGLEQIF 83
Query: 125 FI--CDYMRMIIVGNARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
FI ++++++ ARS IE + + + E + ++ + P IG++G
Sbjct: 84 FIGFSEFLKLLKNTQARSDVIEGVERKLRVGLGRQQLELEQGLPLLASIASVSPYIGLLG 143
Query: 180 AILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQH 235
+ GI+ A LS S + I +L T LG+ + P K
Sbjct: 144 TVWGIMTAFMGLSTSSQATLAAVAPGIAEALIATALGLFAA----IPAALAFNHFTAKND 199
Query: 236 RLYI 239
++Y
Sbjct: 200 KVYQ 203
>gi|115522985|ref|YP_779896.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115516932|gb|ABJ04916.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 264
Score = 42.2 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
I ++ + + ++ +G P +G+ G + GI+ A +SQ +
Sbjct: 137 ERIALRLERVEAAMSRRIARGTGVLATIGAVAPFVGLFGTVWGIMNAFIGISQAQTTNLA 196
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 197 VVAPGIAEALLATALGLVAA 216
>gi|294341041|emb|CAZ89436.1| Protein tolQ [Thiomonas sp. 3As]
Length = 250
Score = 42.2 bits (98), Expect = 0.083, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ ++ R ++ G+ M + ++ +G P +G+ G +
Sbjct: 88 MREYLKLRERHVLDGSTLVDGARRAMRAAFQREMDALEANLSFLASVGSVSPYVGLFGTV 147
Query: 182 LGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
GI+ A + NL Q + + I +L T +G+ +
Sbjct: 148 WGIMHAFVGLSNLQQVTLATVAPGIAEALVATAIGLFAA 186
>gi|261884039|ref|ZP_06008078.1| chemotaxis protein motA (motility protein A) [Campylobacter fetus
subsp. venerealis str. Azul-94]
Length = 50
Score = 42.2 bits (98), Expect = 0.083, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 20/40 (50%)
Query: 236 RLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEI 275
R ++ + +++ + G P+V + L + ER S++
Sbjct: 1 RQKFMIIEGILSVLEGEAPRVIEQKLASYLSVEERKSLQE 40
>gi|127513405|ref|YP_001094602.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
gi|126638700|gb|ABO24343.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
Length = 451
Score = 42.2 bits (98), Expect = 0.083, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 140 SYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++E L + + IL E I + P +G++G + G+I ++ +
Sbjct: 330 DVDVETLELKLDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGT 389
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
PK++ I ++L T+ G++ + L + + + + ++ ++A
Sbjct: 390 GDPKLMAGGISMALMTTVQGLVAALPLML-MHAIVIARSKSVVQVLEEQSAGIVA 443
>gi|254787159|ref|YP_003074588.1| transporter proton channel domain containing protein
[Teredinibacter turnerae T7901]
gi|237686247|gb|ACR13511.1| transporter, proton channel domain containing protein
[Teredinibacter turnerae T7901]
Length = 436
Score = 42.2 bits (98), Expect = 0.084, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
+ I++ N S ++L+ + + + ++ P +G++G + G+I
Sbjct: 311 LIEIVLKNPASGLRDDLLVACLREHRFRIERFMGVVATSAAVAPLLGLLGTVSGMITTFK 370
Query: 190 NLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ + I +L T LG+I++
Sbjct: 371 MMTIFGAGDAATVSGGISEALVTTELGLIVA 401
>gi|261414455|ref|YP_003248138.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370911|gb|ACX73656.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 210
Score = 42.2 bits (98), Expect = 0.085, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N + N M + K I P +G++G + G++ + Q
Sbjct: 89 NDGPVAVRNAMLATRHELDVSLSKSLKTIVTCASIAPLLGLLGTVSGMVHTFETIKQFGF 148
Query: 194 -SPKILGTAIGVSLTGTLLGIILSYSLCN 221
+P +L I +L T G+++++ L
Sbjct: 149 GNPVLLADGISEALLTTQAGLLVAFPLML 177
>gi|296136872|ref|YP_003644114.1| protein TolQ [Thiomonas intermedia K12]
gi|295796994|gb|ADG31784.1| protein TolQ [Thiomonas intermedia K12]
Length = 250
Score = 42.2 bits (98), Expect = 0.086, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+ ++ R ++ G+ M + ++ +G P +G+ G +
Sbjct: 88 MREYLKLRERHVLDGSTLVDGARRAMRAAFQREMDALEANLSFLASVGSVSPYVGLFGTV 147
Query: 182 LGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
GI+ A + NL Q + + I +L T +G+ +
Sbjct: 148 WGIMHAFVGLSNLQQVTLATVAPGIAEALVATAIGLFAA 186
>gi|323143604|ref|ZP_08078281.1| protein TolQ [Succinatimonas hippei YIT 12066]
gi|322416667|gb|EFY07324.1| protein TolQ [Succinatimonas hippei YIT 12066]
Length = 326
Score = 42.2 bits (98), Expect = 0.087, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
+++R++ G A + + ++ + +++ ++ +G P IG+ G +
Sbjct: 91 FKEFVRLVNSGPADQEVVMDGTYRQMKVAASREIENLETHLPTLATIGSISPYIGLFGTV 150
Query: 182 LGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIIL---SYSLCNPLTSQIKSTRLKQ 234
GI+ A L + + ++ I +L T +G+ + N T+++++ +
Sbjct: 151 WGIMHAFVALAAVKNATLSMVAPPIAEALIATAMGLFAAIPAVMFYNRFTTKLEALENRY 210
Query: 235 HRLY 238
Sbjct: 211 LNFM 214
>gi|255020534|ref|ZP_05292598.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
gi|254970054|gb|EET27552.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
Length = 205
Score = 42.2 bits (98), Expect = 0.087, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 51/137 (37%), Gaps = 6/137 (4%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
++ + R E + + ++ + EN+ I + + I
Sbjct: 34 WVLRRARIAPRGLVERVGELVEAGKVQQAVKILYENDTPLARIL--LTALQQAGQPRDVI 91
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
+ +++E + + + + + P +G++G ++GI+ A + PK L
Sbjct: 92 KEMVEEAGRQEVAHLDRYLNFLGSIAGVAPLLGLLGTVIGIMHAFAAIGMVGMGDPKALA 151
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T G+ ++
Sbjct: 152 GGIAEALITTAGGLSVA 168
>gi|242238599|ref|YP_002986780.1| colicin uptake protein TolQ [Dickeya dadantii Ech703]
gi|242130656|gb|ACS84958.1| protein TolQ [Dickeya dadantii Ech703]
Length = 228
Score = 42.2 bits (98), Expect = 0.087, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|307825495|ref|ZP_07655713.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307733381|gb|EFO04240.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 204
Score = 42.2 bits (98), Expect = 0.088, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDI----ILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
++ G A S+ M E I+ ++++ + + + + P +G++G + G+I
Sbjct: 72 CILAAGLANSHHGRKFMKECIEEAGRRVVHDLERFLNTLGTIAAVSPLLGLLGTVFGMID 131
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+L S +P +L I V+L T G+ ++
Sbjct: 132 IFASLLQHGSGNPAVLAGGISVALITTASGLTVA 165
>gi|82523867|emb|CAI78815.1| biopolymer transport protein [uncultured candidate division WS3
bacterium]
Length = 250
Score = 42.2 bits (98), Expect = 0.088, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 76/223 (34%), Gaps = 21/223 (9%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++G + + I G YA G ++I+ + L GF ++ +I +
Sbjct: 4 QILLGSLLVVPAIPG--YAGGDVFDMIIRAAAFSKIILLILFGFSVS-SWAIILE----- 55
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE 121
F + + L + R D+P+ IF EN
Sbjct: 56 RWWF----YKRAERRSLAFLQSFRRAASPQAFRTAVSGGRDNPFAR-IFDRALKQAENGS 110
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK----LKPYHAISHMGESLPAIGI 177
+ Y M + + +++ E+ + ++ G + P IG+
Sbjct: 111 EDSHDAGYREMPVATATERTVATESLKRTLELATTEEIAVLERYLGFLATTGSTCPFIGL 170
Query: 178 VGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+G + G++ + ++ S S ++ I +L T G+ +
Sbjct: 171 LGTVWGVMSSFMSMGREGSASLAVVAPGIAEALIVTAAGLFAA 213
>gi|307944542|ref|ZP_07659882.1| protein TolQ [Roseibium sp. TrichSKD4]
gi|307772291|gb|EFO31512.1| protein TolQ [Roseibium sp. TrichSKD4]
Length = 139
Score = 42.2 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ +MD I ++ +G + P IG+ G + GI+ A + S +
Sbjct: 19 QQRIDRVMDVTIQREAERLESRLLILASVGSAGPFIGLFGTVWGIMTAFQAIANAESTNL 78
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 79 AVVAPGIAEALFATALGLLAA 99
>gi|319404748|emb|CBI78350.1| Biopolymer transport exbB protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 274
Score = 42.2 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 52/147 (35%), Gaps = 7/147 (4%)
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNST--IFTSIPTVLENNELTTFICDYMRMI 133
L +K S E + + S+ + L N+ F D +
Sbjct: 75 AQTFAELIASFQKIKGTSVFFLEEVLKEIRLSSQQLCLMKSKDLHQNQSEVFPYDILSCG 134
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ + + +L+ + + ++ +G P +G+ + GI+ A +++
Sbjct: 135 NIDGVKE-RVHSLLSRSLFAAMRRIACGSAVLATIGSVAPFVGLFATVWGIMNAFIGIAK 193
Query: 194 SP----KILGTAIGVSLTGTLLGIILS 216
S ++ I +L T +G+ ++
Sbjct: 194 SQTTRLDVVAPGIAEALLATAIGLFVA 220
>gi|283138918|gb|ADB12521.1| hypothetical protein [uncultured bacterium 9F08]
Length = 208
Score = 42.2 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 119 NNELTTFICDY---MRMIIVGNARSYEIENLMDEEIDIILY----EKLKPYHAISHMGES 171
+N+ T + D R++ G +M E I+ E + + + +
Sbjct: 57 DNQRLTLLRDGSPLGRILAAGLVNMQHEREVMKEAIEETGRQVVIELERFLNTLGTIASI 116
Query: 172 LPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
P +G++G ++G+IK ++ +P +L I +L T G+ ++
Sbjct: 117 TPLLGLLGTVIGMIKVFAAITSQGVGNPAVLAGGISEALITTAAGLSVA 165
>gi|260590600|ref|ZP_05856058.1| MotA/TolQ/ExbB proton channel family protein [Prevotella veroralis
F0319]
gi|260537425|gb|EEX20042.1| MotA/TolQ/ExbB proton channel family protein [Prevotella veroralis
F0319]
Length = 276
Score = 42.2 bits (98), Expect = 0.091, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + + SP I+ + V+L T+ GII
Sbjct: 176 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQEAGDISPTIVAAGMKVALITTIFGII 235
Query: 215 LS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
++ N + S+I+ + I + A++
Sbjct: 236 VALVLQVFYNYILSKIEHITAQMEESAISLLDAIM 270
>gi|86607417|ref|YP_476180.1| MotA/TolQ/ExbB family proton transporter [Synechococcus sp.
JA-3-3Ab]
gi|86555959|gb|ABD00917.1| proton transporter, MotA/TolQ/ExbB proton channel family
[Synechococcus sp. JA-3-3Ab]
Length = 238
Score = 42.2 bits (98), Expect = 0.091, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
+LE N ++ + + A + + ++ + + + + P +
Sbjct: 64 LLEQNADLPIARIFLAGLELNEASPEDFKLALETALAAEVPLLKRFNTVFDTVITVAPFL 123
Query: 176 GIVGAILGIIKAMGNL------SQSPKILGTAIGVSLTGTLLGIILS 216
G++G + GII+ + ++ + +G I +L T G+I++
Sbjct: 124 GLLGTVTGIIQILSSIQLGDIGGTDTQGVGQGIAEALYSTAFGLIVA 170
>gi|15604178|ref|NP_220693.1| TOLQ protein (tolQ) [Rickettsia prowazekii str. Madrid E]
gi|3860870|emb|CAA14770.1| TOLQ PROTEIN (tolQ) [Rickettsia prowazekii]
gi|292571910|gb|ADE29825.1| TolQ [Rickettsia prowazekii Rp22]
Length = 241
Score = 42.2 bits (98), Expect = 0.091, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I + M + + + + + ++ +G S P IG+ G + GI+ + ++ + S
Sbjct: 121 ERIMSAMYLAQNREIEKLEQNLNVLATIGSSAPFIGLFGTVWGIMHSFQSIASSKNTSLA 180
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ ++
Sbjct: 181 VVAPGIAEALLATAIGLFVA 200
>gi|304313302|ref|YP_003812900.1| MotA/TolQ/ExbB proton channel protein [gamma proteobacterium HdN1]
gi|301799035|emb|CBL47278.1| MotA/TolQ/ExbB proton channel protein [gamma proteobacterium HdN1]
Length = 243
Score = 42.2 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
R + +E + ++ ++ +G + P +G+ G ++GI++A+ ++ S S
Sbjct: 95 REHRLERHLRTQLHAERRSLEGGLTLLASIGSTAPFVGLFGTVIGIMRALQDIGTSGSAS 154
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
++ IG +L T +GI ++
Sbjct: 155 LDVVAGPIGEALLATGIGIAVA 176
>gi|253578402|ref|ZP_04855674.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850720|gb|EES78678.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 546
Score = 42.2 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 77/224 (34%), Gaps = 40/224 (17%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+T++ L + C+ G+ +I F + V + +
Sbjct: 6 MNTVLFLVVLGGCVAMTLLTGNGSSGTMIYNFAFLAVM------------------AVIY 47
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L +FG + + L K + ++E S + ++
Sbjct: 48 LAGLFGGMFRVDSIGEALARGTQELSSIFKIPGKAKSE------DLSCLKGMFEHKYLDD 101
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
+ +F+ D M G + + ++EID+ ++ + + ++GI+G
Sbjct: 102 RMDSFV-DAMEKNQEGIGDVEDY--INEDEIDLHVH-----KKILEMAPDIFTSLGILGT 153
Query: 181 ILGIIKAMGN--------LSQSPKILGTAIGVSLTGTLLGIILS 216
+G++ + + ++ S L I V+ ++ GI +
Sbjct: 154 FIGLVWGLKSFEPSSYETMTTSVSALVDGIKVAFLTSIYGIAFA 197
>gi|315186359|gb|EFU20119.1| MotA/TolQ/ExbB proton channel [Spirochaeta thermophila DSM 6578]
Length = 208
Score = 42.2 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 16/128 (12%)
Query: 105 YNSTIFTSIPTVLENNELTT--FICDY-----MRMIIVG----NARSYEIENLMDEEIDI 153
+F I + LE +ICD +I VG + + ++ + +
Sbjct: 39 DEEKLFRRIKSSLEKGHFDEALYICDTNYSPLSVLIKVGIEHRDHPEHIQREVIKDAANQ 98
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTG 208
+ K + + P +G++G + G +K G L Q P IL T I +L
Sbjct: 99 EVPRLEKNLSGLGTIAHIAPLLGLLGTVTGTMKTFGVLGQFGAVTDPGILATGISEALIT 158
Query: 209 TLLGIILS 216
T+ GI+++
Sbjct: 159 TVAGILVA 166
>gi|46447181|ref|YP_008546.1| putative biopolymer transport protein exbB [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400822|emb|CAF24271.1| putative biopolymer transport protein exbB [Candidatus
Protochlamydia amoebophila UWE25]
Length = 241
Score = 42.2 bits (98), Expect = 0.093, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----- 191
N +IE+ M+ + + + +S + P IG++G +LG I+A +
Sbjct: 117 NRDKEQIESAMEISGLVEIARLERNAKILSIIAYIAPLIGLLGTVLGFIQAFSEMRLSGL 176
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILS 216
S +G A+ +L T G++++
Sbjct: 177 VDISATRIGEAMEYALVTTAAGLVVA 202
>gi|309389205|gb|ADO77085.1| MotA/TolQ/ExbB proton channel [Halanaerobium praevalens DSM 2228]
Length = 215
Score = 42.2 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL--SQSPKIL 198
E +D E L E K ++ + ++ P +G++G + G+I L +P+ +
Sbjct: 86 EEFSLYLDAEEVDKLPELEKHLGFLNFIAQAAPTLGLLGTVSGMITTFQVLGVGGNPEQM 145
Query: 199 GTAIGVSLTGTLLGIIL---SYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
I +L T G+I+ + + + S+++ Q + ++L+
Sbjct: 146 ALGISEALFTTAAGLIISLPAAAFYHYFYSRLE-KLHNQLNNLRLESESLL 195
>gi|312115994|ref|YP_004013590.1| protein TolQ [Rhodomicrobium vannielii ATCC 17100]
gi|311221123|gb|ADP72491.1| protein TolQ [Rhodomicrobium vannielii ATCC 17100]
Length = 226
Score = 42.2 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + ++ +G P IG+ G + GI+ A + + +
Sbjct: 106 QMRIERVMEVTITREMERLEARLLFLATVGAVAPFIGLFGTVWGIMTAFQGIAASKNTNL 165
Query: 196 KILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ I +L T LG++ + Y+ S++ + +
Sbjct: 166 AVVAPGIAEALFATALGLLAAIPAVIFYNAFQQSASRLAQRLEGFADEFSAIV 218
>gi|158333399|ref|YP_001514571.1| biopolymer transport protein ExbB like [Acaryochloris marina
MBIC11017]
gi|158303640|gb|ABW25257.1| biopolymer transport protein ExbB like, putative [Acaryochloris
marina MBIC11017]
Length = 235
Score = 42.2 bits (98), Expect = 0.095, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 7/85 (8%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL------- 191
++ D K + P +G++G + G+I NL
Sbjct: 87 SPETFRLALEAAADKEFVRMRKGDKLLETTVAVAPLMGLLGTVTGLINTFNNLNIGSGGT 146
Query: 192 SQSPKILGTAIGVSLTGTLLGIILS 216
S+ IG +L T G++++
Sbjct: 147 SEQATKAAAGIGEALLTTAAGMVVA 171
>gi|149176886|ref|ZP_01855496.1| probable tolQ protein [Planctomyces maris DSM 8797]
gi|148844323|gb|EDL58676.1| probable tolQ protein [Planctomyces maris DSM 8797]
Length = 297
Score = 42.2 bits (98), Expect = 0.095, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 73/177 (41%), Gaps = 11/177 (6%)
Query: 78 VLKLLYILMYNLKKGSRN--ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
++ L+ + ++++ + + ++ NS + + ++++ + +
Sbjct: 116 MVALIMANVLSIRRDNLMPPDLIGAFEEKINSKDYQGAYELAKSDDSFVARVLAAGLSKL 175
Query: 136 GNARSYEIENLMDE-EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+ +E + + E + + E Y A+ +G P IG++G + G+I + ++ S
Sbjct: 176 NQGYAEAVEGMQEVGEDENMAMEHKLSYLAL--IGAIAPMIGLMGTVYGMILSFQTIANS 233
Query: 195 -----PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
P L I +L TL G+ ++ S +++ + ++ ++L+
Sbjct: 234 ATSPKPSELADGISTALFTTLEGLTVAIPAMI-FYSLLRNRVARFSLEVGMISESLM 289
>gi|213420649|ref|ZP_03353715.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 179
Score = 42.2 bits (98), Expect = 0.095, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 61 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 116
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 117 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 170
>gi|237747406|ref|ZP_04577886.1| biopolymer transporter ExbB [Oxalobacter formigenes HOxBLS]
gi|229378757|gb|EEO28848.1| biopolymer transporter ExbB [Oxalobacter formigenes HOxBLS]
Length = 202
Score = 42.2 bits (98), Expect = 0.096, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 11/170 (6%)
Query: 51 LKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIF 110
+I+ +G + + + + L + + E I D I
Sbjct: 2 FYIIQAAGWPIWLLLIASVIALALIIERL----WYLRRSRILPAGLLEQTIRDYREGRID 57
Query: 111 TSIPTVLENNELT-TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
LE N + ++ V + M+E + + + I +
Sbjct: 58 NKTIAWLEGNSPLGAVLATGLQHSDVSRDN---MREAMEETGRSVALQMERFLTTIGTIA 114
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQ---SPKILGTAIGVSLTGTLLGIILS 216
P +G+ G ++G+I+ G+ S +P L I V+L T G++++
Sbjct: 115 TLAPLMGLFGTVVGMIEIFGSQSATGTNPAQLAHGISVALYNTGFGLLIA 164
>gi|332530155|ref|ZP_08406104.1| transmembrane protein/ biopolymer transport [Hylemonella gracilis
ATCC 19624]
gi|332040425|gb|EGI76802.1| transmembrane protein/ biopolymer transport [Hylemonella gracilis
ATCC 19624]
Length = 231
Score = 42.2 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 56/187 (29%), Gaps = 27/187 (14%)
Query: 34 IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGS 93
++I+ + I L ++ + + L + +K
Sbjct: 22 MLILLCGSIA------SWAAIFSKHFGLKKVRASNEKFEQDFWSGANLNTLYAQAAQKSD 75
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
E V +N+ L MR M E+D
Sbjct: 76 SGPMERIFVAGLREYQKLRERRVTDNSALLDGARRAMR-------------ASMQREMDS 122
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGT 209
+ ++ +G P IG+ G + GI+ A + ++ Q + + I +L T
Sbjct: 123 VESNL----SFLATVGSVSPYIGLFGTVWGIMHAFTGLASMQQVTLATVAPGIAEALVAT 178
Query: 210 LLGIILS 216
+G+ +
Sbjct: 179 AIGLFAA 185
>gi|42522085|ref|NP_967465.1| tolQ protein [Bdellovibrio bacteriovorus HD100]
gi|39574616|emb|CAE78458.1| tolQ protein [Bdellovibrio bacteriovorus HD100]
Length = 209
Score = 42.2 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
I S + + ++ + + +A S + + + E K
Sbjct: 53 IKLALQSNSLEDVEDLAKDPNSIEGRAAGYALKHMRDAGSKGLSEIFNTFALTERPELEK 112
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG----TAIGVSLTGTLLGIILS 216
++ +G + P IG+ G +LGI+KA +L+ +P+ I ++L T G+ ++
Sbjct: 113 FLGFLATVGSNAPYIGLFGTVLGIMKAFNDLATAPEAGQQTVMAGISMALVATAAGLFVA 172
>gi|146279028|ref|YP_001169187.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
gi|145557269|gb|ABP71882.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 355
Score = 42.2 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++++ + ++ +G P +G+ G + GI+ A +SQ +
Sbjct: 232 ERVRSILERVEAQAGERLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLA 291
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 292 VVAPGIAEALLATGLGLVAA 311
>gi|302337651|ref|YP_003802857.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
gi|301634836|gb|ADK80263.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
Length = 231
Score = 42.2 bits (98), Expect = 0.099, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SP 195
++ +D E I E + A+S +G P +G++G + G+++A +
Sbjct: 102 EALDEAVDREGSAIRREMDRGLEALSVIGNIAPLMGLLGTVTGLMRAFHRIESLGGTVDI 161
Query: 196 KILGTAIGVSLTGTLLGIILS 216
I ++ T +G+I++
Sbjct: 162 AAFSGGIWEAMITTAIGLIVA 182
>gi|33593724|ref|NP_881368.1| putative biopolymer transport protein [Bordetella pertussis Tohama
I]
gi|33597150|ref|NP_884793.1| putative biopolymer transport protein [Bordetella parapertussis
12822]
gi|33600995|ref|NP_888555.1| putative biopolymer transport protein [Bordetella bronchiseptica
RB50]
gi|33563797|emb|CAE43039.1| putative biopolymer transport protein [Bordetella pertussis Tohama
I]
gi|33566601|emb|CAE37859.1| putative biopolymer transport protein [Bordetella parapertussis]
gi|33575430|emb|CAE32507.1| putative biopolymer transport protein [Bordetella bronchiseptica
RB50]
gi|332383127|gb|AEE67974.1| putative biopolymer transport protein [Bordetella pertussis CS]
Length = 206
Score = 42.2 bits (98), Expect = 0.099, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---SQSPKI 197
E+ +++ YE + AI + P +G+ G ++G+I+ G+ + P
Sbjct: 86 EELRTAVEDAGRGAAYELGRYVSAIGTIAVVAPLMGLFGTVVGMIEIFGSYAPGASDPAQ 145
Query: 198 LGTAIGVSLTGTLLGIILS 216
L I ++L T GI+++
Sbjct: 146 LARGISIALYNTGFGILIA 164
>gi|170717554|ref|YP_001783485.1| Tol-Pal system TolQ [Haemophilus somnus 2336]
gi|168825683|gb|ACA31054.1| Tol-Pal system TolQ [Haemophilus somnus 2336]
Length = 227
Score = 42.2 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
+I L L ++ + D+ KL L ++ N +E
Sbjct: 32 SWAIIIQRSRILTRALKDSTLFEERFWSGEDLYKLYDGLSN--RRNGLNSSER------- 82
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
IF E N L D II G++R+ + M+ E++ + ++
Sbjct: 83 --IF--YVGFKEFNRLKQANPDAPEAIIQGSSRAMNLT--MNREVEDLETR----VPFLA 132
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ P IG+ G + GI+ A LS + +++ I +L T +G+ +
Sbjct: 133 TVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGLFAA 186
>gi|332974511|gb|EGK11432.1| TonB family auxiliary protein ExbB [Psychrobacter sp. 1501(2011)]
Length = 217
Score = 41.8 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
+E ++ +EI +E K + P IG+ G + GI A+ ++ +S + +
Sbjct: 72 VVEQVLLKEIGRYRFESEKGLAILGTTAAIAPFIGLFGTVWGIFHALHSIGESGQAGLSQ 131
Query: 202 IGV----SLTGTLLGIILSYS--LCNPLTSQIKSTR 231
+ +L T LG+ ++ + + +I
Sbjct: 132 VAGPVGEALIMTGLGLAVAIPAVIFYNIAVRINRKT 167
>gi|307718628|ref|YP_003874160.1| tolQ-type transport protein [Spirochaeta thermophila DSM 6192]
gi|306532353|gb|ADN01887.1| probable tolQ-type transport protein [Spirochaeta thermophila DSM
6192]
Length = 208
Score = 41.8 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----- 193
+ ++ + + + K + + P +G++G + G +K G L Q
Sbjct: 84 PEHIQREVIKDAANQEVPRLEKNLSGLGTIAHIAPLLGLLGTVTGTMKTFGVLGQFGAVT 143
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
P IL T I +L T+ GI+++
Sbjct: 144 DPGILATGISEALITTVAGILVA 166
>gi|307130106|ref|YP_003882122.1| membrane spanning protein in TolA-TolQ-TolR complex [Dickeya
dadantii 3937]
gi|16116634|emb|CAC82706.1| TolQ protein [Erwinia chrysanthemi]
gi|306527635|gb|ADM97565.1| membrane spanning protein in TolA-TolQ-TolR complex [Dickeya
dadantii 3937]
Length = 228
Score = 41.8 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|325856066|ref|ZP_08171955.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella denticola CRIS 18C-A]
gi|325483738|gb|EGC86702.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella denticola CRIS 18C-A]
Length = 272
Score = 41.8 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + + SP I+ + V+L T+ GII
Sbjct: 167 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQEAGDISPTIVAAGMKVALITTIFGII 226
Query: 215 LS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
++ N + S+I+ + I + A++
Sbjct: 227 VALVLQVFYNYILSKIEHITAQMEESAISLLDAIM 261
>gi|317487214|ref|ZP_07946013.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
gi|316921533|gb|EFV42820.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
Length = 252
Score = 41.8 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 14/136 (10%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKIL 198
E + + +L +S + P +G++G ILG+I +++ +L
Sbjct: 78 EAALRLAGETVLERLEARLSLLSVLARLAPLMGLLGTILGMITTFSRIAEARSGVDMSLL 137
Query: 199 GTAIGVSLTGTLLGIILSYS---LCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
I +L T G+ ++ + +++ + K A + P
Sbjct: 138 AGGIWQALLTTAAGLCIAIPALFFLSCFQGKVRRVADA------LNKAGNAALLADGGPG 191
Query: 256 VAIEYGRKVLPLSERP 271
+ + G + L + P
Sbjct: 192 ITVRAGAEPLQPGDIP 207
>gi|257469999|ref|ZP_05634091.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|317064225|ref|ZP_07928710.1| ligand gated channel protein TolQ [Fusobacterium ulcerans ATCC
49185]
gi|313689901|gb|EFS26736.1| ligand gated channel protein TolQ [Fusobacterium ulcerans ATCC
49185]
Length = 206
Score = 41.8 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSP 195
I+ + +EI + H + + P +G++G + G+I A +LS P
Sbjct: 96 DQIIKEIEMDEISPLEKRL----HILGIIAHVAPMLGLLGTVTGMIDAFKDLSKFGAGDP 151
Query: 196 KILGTAIGVSLTGTLLGIILS 216
I+ +I +L T G+ ++
Sbjct: 152 TIVADSISKALITTAAGLSIA 172
>gi|56707946|ref|YP_169842.1| TolQ protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110670417|ref|YP_666974.1| TolQ protein [Francisella tularensis subsp. tularensis FSC198]
gi|134302261|ref|YP_001122230.1| TolQ protein [Francisella tularensis subsp. tularensis WY96-3418]
gi|254874750|ref|ZP_05247460.1| tolQ protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|56604438|emb|CAG45470.1| TolQ protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110320750|emb|CAL08853.1| TolQ protein [Francisella tularensis subsp. tularensis FSC198]
gi|134050038|gb|ABO47109.1| protein TolQ [Francisella tularensis subsp. tularensis WY96-3418]
gi|254840749|gb|EET19185.1| tolQ protein [Francisella tularensis subsp. tularensis MA00-2987]
Length = 239
Score = 41.8 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D + E + + ++ P A++ +G P IG+VG + GI+
Sbjct: 98 LKDTCMLRGDTILEGMERTVSIAIAQEAKELDRKLP--ALATIGAVAPYIGLVGTVWGIM 155
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ ++
Sbjct: 156 SSFNTLGGVEQATISVVAPHIAEALIATALGLFVA 190
>gi|95929962|ref|ZP_01312702.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95133931|gb|EAT15590.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 222
Score = 41.8 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 42/132 (31%), Gaps = 4/132 (3%)
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD 148
K + I +S + + + I + I +
Sbjct: 52 WNKKRLDAVAQEIKQYSHSPLSSLFREGYQELLKVQRIEKGDDSRGFADMGGENIARALR 111
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGV 204
+ K ++ G + P IG+ G + GI+ + + Q+ ++ I
Sbjct: 112 RASTQETHRLEKYLTFLATTGSTAPFIGLFGTVWGIMDSFHGIGQTGSASLAVVAPGISE 171
Query: 205 SLTGTLLGIILS 216
+L T +G++ +
Sbjct: 172 ALVATAIGLMAA 183
>gi|254436624|ref|ZP_05050118.1| protein TolQ [Octadecabacter antarcticus 307]
gi|198252070|gb|EDY76384.1| protein TolQ [Octadecabacter antarcticus 307]
Length = 248
Score = 41.8 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---- 193
+ I MD I + K ++ +G + P +G+ G + GI+ A +SQ
Sbjct: 128 DSTARINTSMDVTIAKQSSKLQKGLPILATVGSTAPFVGLFGTVWGIMNAFIEISQAQTT 187
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ ++ I +L T +G++ + + +++ + + Y
Sbjct: 188 NLAVVAPGIAEALMSTGIGLLAAIPAVI-IYNKLSTDSEQIVSGYE 232
>gi|302338258|ref|YP_003803464.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
gi|301635443|gb|ADK80870.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
Length = 242
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R + + + + L++ E I+ E +S +G P G+ G + G++ A
Sbjct: 95 RFMENRRSSTAILRELLEREGAILQREMDHGVEWLSVVGNLAPLCGLFGTVTGLMSAFRQ 154
Query: 191 L-----SQSPKILGTAIGVSLTGTLLG 212
+ S I ++ T G
Sbjct: 155 IEATGGSADISTFAGGIWAAMITTAFG 181
>gi|297620445|ref|YP_003708582.1| putative biopolymer transport protein ExbB [Waddlia chondrophila
WSU 86-1044]
gi|297375746|gb|ADI37576.1| putative biopolymer transport protein ExbB [Waddlia chondrophila
WSU 86-1044]
Length = 214
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----- 191
N EIEN M+ I + + K +S + P +G++G +LG I+A +
Sbjct: 91 NRSKEEIENSMEIAGMIEIAQLEKNAKILSIIAHIAPLVGLLGTVLGFIQAFAEMRMSGL 150
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILS 216
S +G A+ +L T G++++
Sbjct: 151 VDISANRIGEAMEYALVTTAAGLVVA 176
>gi|316932661|ref|YP_004107643.1| protein TolQ [Rhodopseudomonas palustris DX-1]
gi|315600375|gb|ADU42910.1| protein TolQ [Rhodopseudomonas palustris DX-1]
Length = 236
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 116 QMRIEKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 175
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 176 AVVAPGIAEALFATAIGLIAA 196
>gi|213619068|ref|ZP_03372894.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 182
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 64 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 119
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 120 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 173
>gi|284007873|emb|CBA73790.1| biopolymer transport protein [Arsenophonus nasoniae]
Length = 224
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N S + M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 103 NGASRAMRISMNRELESL--EAHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGSVKQ 158
Query: 194 -SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +++ I +L T +G+ + +++ K + Y + +A ++
Sbjct: 159 ATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQSYDNFMEEFLAILHRQ 217
Query: 253 I 253
Sbjct: 218 A 218
>gi|254429386|ref|ZP_05043093.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
gi|196195555|gb|EDX90514.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
Length = 205
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDI----ILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G A + ++M E I +++E K + + P +G++G ++G+I
Sbjct: 68 RILATGLANARHGRDIMKESIQESATGVVHELEKFLSTLGSIAAITPLLGLLGTVVGMID 127
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + L I +L T G++++
Sbjct: 128 VFAAIMIHGTGDAAQLAGGISQALLTTAAGLVVA 161
>gi|90422455|ref|YP_530825.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90104469|gb|ABD86506.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 283
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + + ++ +G + P IG+ G + GI+ A +SQ +
Sbjct: 156 ERVALRLERVEGAMSRRIARGTGILATIGATSPFIGLFGTVWGIMNAFIGISQAHTTNLA 215
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 216 VVAPGIAEALLATALGLVAA 235
>gi|42521815|ref|NP_967195.1| adventurous gliding motility protein X [Bdellovibrio bacteriovorus
HD100]
gi|39574345|emb|CAE77849.1| Adventurous gliding motility protein X [Bdellovibrio bacteriovorus
HD100]
Length = 245
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 70/208 (33%), Gaps = 21/208 (10%)
Query: 34 IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGS 93
++++ + + + V + E+F K ++ + + + +
Sbjct: 36 LLMLIVMSVFCWAIGYSKYVTFKNMKQSDELFLSKFWKVNSLDTLFEDIDQYKDSSVARV 95
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
+ S + + + + I+ G +E ++++ +
Sbjct: 96 FKAVYLEMKKISESPLLSK--------------TEGDKPILSGIDN---LERVLNKATES 138
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGT 209
+ + ++ G + P IG+ G + GI+ + + Q+ ++ I +L T
Sbjct: 139 EISKLESRLTVLATTGSTGPFIGLFGTVWGIMGSFHKIGQTGTASLAVVAPGISEALIAT 198
Query: 210 LLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+G+ + + I R ++ L
Sbjct: 199 AIGLATAIPAVVLYNNFISKIRKQEIVL 226
>gi|15892345|ref|NP_360059.1| tolQ protein [Rickettsia conorii str. Malish 7]
gi|34580648|ref|ZP_00142128.1| tolQ protein [Rickettsia sibirica 246]
gi|229586571|ref|YP_002845072.1| TolQ [Rickettsia africae ESF-5]
gi|15619491|gb|AAL02960.1| tolQ protein [Rickettsia conorii str. Malish 7]
gi|28262033|gb|EAA25537.1| tolQ protein [Rickettsia sibirica 246]
gi|228021621|gb|ACP53329.1| TolQ [Rickettsia africae ESF-5]
Length = 241
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I M + + + K ++ +G S P +G+ G + GI+ + ++ + S
Sbjct: 121 ERITGAMYLAQNREVEKLEKNLSFLATVGSSAPFVGLFGTVWGIMHSFQSIATSKNTSLA 180
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ +
Sbjct: 181 VVAPGIAEALLATAIGLFAA 200
>gi|157369519|ref|YP_001477508.1| colicin uptake protein TolQ [Serratia proteamaculans 568]
gi|270263782|ref|ZP_06192051.1| hypothetical protein SOD_e04120 [Serratia odorifera 4Rx13]
gi|293397225|ref|ZP_06641498.1| TolQ colicin import protein [Serratia odorifera DSM 4582]
gi|157321283|gb|ABV40380.1| Tol-Pal system TolQ [Serratia proteamaculans 568]
gi|270042666|gb|EFA15761.1| hypothetical protein SOD_e04120 [Serratia odorifera 4Rx13]
gi|291420245|gb|EFE93501.1| TolQ colicin import protein [Serratia odorifera DSM 4582]
Length = 224
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|238920741|ref|YP_002934256.1| colicin uptake protein TolQ [Edwardsiella ictaluri 93-146]
gi|238870310|gb|ACR70021.1| protein TolQ, putative [Edwardsiella ictaluri 93-146]
Length = 227
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ ++ EI+ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISLNREIEAM--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNLRVNKLEQNYENFMEEFIAILHRQA 221
>gi|39934192|ref|NP_946468.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris CGA009]
gi|192289718|ref|YP_001990323.1| protein TolQ [Rhodopseudomonas palustris TIE-1]
gi|39648040|emb|CAE26560.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Rhodopseudomonas palustris CGA009]
gi|192283467|gb|ACE99847.1| protein TolQ [Rhodopseudomonas palustris TIE-1]
Length = 236
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 116 QMRIEKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 175
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 176 AVVAPGIAEALFATAIGLIAA 196
>gi|88705098|ref|ZP_01102810.1| MotA/TolQ/ExbB proton channel family protein [Congregibacter
litoralis KT71]
gi|88700793|gb|EAQ97900.1| MotA/TolQ/ExbB proton channel family protein [Congregibacter
litoralis KT71]
Length = 207
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIIL----YEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G A ++ ++M E I+ ++ + + + + P +G++G ++G+I+
Sbjct: 72 RILAAGLANAHHGRDVMKESIEEAAGHVVHDLERYLNTLGTIAAIAPLLGLLGTVVGMIR 131
Query: 187 A----MGNLSQSPKILGTAIGVSLTGTLLGIILS 216
M + + L I +L T G+ ++
Sbjct: 132 VFAEIMSQGTGNASALAGGISEALITTAAGLCVA 165
>gi|198284027|ref|YP_002220348.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666160|ref|YP_002426671.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248548|gb|ACH84141.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518373|gb|ACK78959.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 230
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 45/114 (39%), Gaps = 4/114 (3%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS---PKILG 199
+ + ++E I I+ + + + + P +G+ G I+G+ A L+ P +
Sbjct: 94 LASRLEESILIMAPQLDRRLWLLDTIITLAPLLGLFGTIIGMFHAFSVLTAPGHAPTAVT 153
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+ +L T G+ ++ + + + + VK L+ M+G
Sbjct: 154 GGVADALVATATGLFVAMTGLVAF-NAFNNQVRQILLQLDSVKTILLNSMDGHP 206
>gi|238650758|ref|YP_002916612.1| tolQ protein [Rickettsia peacockii str. Rustic]
gi|238624856|gb|ACR47562.1| tolQ protein [Rickettsia peacockii str. Rustic]
Length = 241
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I M + + + K ++ +G S P +G+ G + GI+ + ++ + S
Sbjct: 121 ERITGAMYLAQNRAVEKLEKNLSFLATVGSSAPFVGLFGTVWGIMHSFQSIATSKNTSLA 180
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ +
Sbjct: 181 VVAPGIAEALLATAIGLFAA 200
>gi|163796371|ref|ZP_02190332.1| Biopolymer transport protein [alpha proteobacterium BAL199]
gi|159178513|gb|EDP63055.1| Biopolymer transport protein [alpha proteobacterium BAL199]
Length = 243
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
+ I+ +M I + K ++ +G + P IG+ G + GI+ + ++ + S
Sbjct: 124 HRIDQVMLLTISREMEALEKRMTFLASVGSTAPFIGLFGTVWGIMNSFQSIAASKNTSLA 183
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 184 VVAPGIAEALFATALGLVAA 203
>gi|254786553|ref|YP_003073982.1| transporter MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
gi|237686534|gb|ACR13798.1| transporter, MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
Length = 217
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTL 210
E+ + + + P +G+ G +LG+I A + +P +L I +L T
Sbjct: 107 EEQQRYLRVLEVVAMVAPLLGLFGTVLGMISAFQAMEDAGAQVNPSVLSGGIWKALMTTA 166
Query: 211 LGIILS 216
+G+ ++
Sbjct: 167 VGLAVA 172
>gi|34556940|ref|NP_906755.1| EXBB\TOLQ family transport protein [Wolinella succinogenes DSM
1740]
gi|34482655|emb|CAE09655.1| EXBB\TOLQ FAMILY TRANSPORT PROTEIN [Wolinella succinogenes]
Length = 194
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILG 199
+++ L E +S + + P IG+ G ++ I++A L ++
Sbjct: 82 REILEVCKHKALREATIGLTILSIIASTAPFIGLFGTVVEILEAFSKLGGGARASLDVIA 141
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
I +L T GI+ + + +K + + + L++
Sbjct: 142 PVISKALVATAAGILTAIPAYS-FHLFLKRKAFELSSYLQMQMELLLS 188
>gi|251772670|gb|EES53234.1| MotA/TolQ/ExbB proton channel [Leptospirillum ferrodiazotrophum]
Length = 223
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Query: 136 GNARSYEIENLMDEEIDIILY---EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
G R EIE + + ++ P +G+ G + GII A ++S
Sbjct: 97 GEVRESEIEIIHRTLLQARQEDLTRLESYLQILATTANISPFVGLFGTVWGIIHAFRDIS 156
Query: 193 Q----SPKILGTAIGVSLTGTLLGIILS 216
S + I +L T G+ +
Sbjct: 157 HQSSVSIASVAPGIADALVTTASGLFAA 184
>gi|86608301|ref|YP_477063.1| MotA/TolQ/ExbB family proton transporter [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556843|gb|ABD01800.1| proton transporter, MotA/TolQ/ExbB proton channel family
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 231
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
+LE N ++ + + A + + ++ + + + + P +
Sbjct: 57 LLEQNADLPIARIFLAGLELNEASPEDFKLALETALAAEVPLLKRFNTVFDTVITVAPFL 116
Query: 176 GIVGAILGIIKAMGNL------SQSPKILGTAIGVSLTGTLLGIILS 216
G++G + GII+ + ++ + +G I +L T G+I++
Sbjct: 117 GLLGTVTGIIQILSSIQLGDIGGTDTQGVGRGIAEALYSTAFGLIVA 163
>gi|254475158|ref|ZP_05088544.1| protein TolQ [Ruegeria sp. R11]
gi|214029401|gb|EEB70236.1| protein TolQ [Ruegeria sp. R11]
Length = 231
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
IE MD I ++ +G + P +G+ G + GI+ A +++ + +
Sbjct: 115 RIERSMDVAIAKESESVQSGLSILATIGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T LG++ + +++ + + Y
Sbjct: 175 VAPGIAEALMATGLGLLAAIPAVI-FYNKLSADSDRIIGSYE 215
>gi|126463339|ref|YP_001044453.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|126105003|gb|ABN77681.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
Length = 363
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++++ + ++ +G P +G+ G + GI+ A +SQ +
Sbjct: 240 ERVRSILERVEAQAGERLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLA 299
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 300 VVAPGIAEALLATGLGLVAA 319
>gi|167842102|ref|ZP_02468786.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 246
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+R +E + +I ++ +G P +G+ G + GII A+G +S +
Sbjct: 95 SRQDTLERQLARQIGHERRRLEHALAWLASVGSVAPFVGLFGTVFGIINALGAISHAASA 154
Query: 198 LGTA----IGVSLTGTLLGIILS 216
IG +L T +GI ++
Sbjct: 155 SIAVVAGPIGEALVATGIGIAVA 177
>gi|254458976|ref|ZP_05072399.1| MotA/TolQ/ExbB proton channel [Campylobacterales bacterium GD 1]
gi|207084247|gb|EDZ61536.1| MotA/TolQ/ExbB proton channel [Campylobacterales bacterium GD 1]
Length = 188
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS---PKILGT 200
+ ++ + E K +S + P IG+ G ++ I+ ++ QS ++ +
Sbjct: 80 KEILGLAMLAATKEATKGLSLLSIFASTTPFIGLFGTVVSILDTFTHIGQSTGSMSVISS 139
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ +L T GI ++ +K + + A++A
Sbjct: 140 GVSDALVATAAGIFVA-IFAYTYHQVLKRKSFELVSCLQMQSDAVLA 185
>gi|319407712|emb|CBI81360.1| Biopolymer transport exbB protein [Bartonella sp. 1-1C]
Length = 274
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----K 196
+ +L+ + + ++ +G P +G+ + GI+ A +++S
Sbjct: 141 ERVHSLLSRSLFAAMRRIACGSAVLATIGSVAPFVGLFATVWGIMNAFIGIAKSQTTRLD 200
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ ++
Sbjct: 201 VVAPGIAEALLATAIGLFVA 220
>gi|186476701|ref|YP_001858171.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
gi|184193160|gb|ACC71125.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
Length = 243
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
++P+ + + +++ + D RM + + + + +D +
Sbjct: 78 ENPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDESVARMQAG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G +L T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLTIGATGQSSIDQVAGPVGEALIMTAFGLFVA 189
>gi|261822333|ref|YP_003260439.1| colicin uptake protein TolQ [Pectobacterium wasabiae WPP163]
gi|261606346|gb|ACX88832.1| protein TolQ [Pectobacterium wasabiae WPP163]
Length = 228
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVGKLEQNYDNFTEEFIAILHRQA 221
>gi|91775912|ref|YP_545668.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91709899|gb|ABE49827.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
Length = 244
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
R +E + ++I ++ +G + P +G+ G + GI+ A+ N+ S
Sbjct: 96 GDRQDLLERSLRQQILKERRSLDSGLAVLASIGSTSPFVGLFGTVWGIMNALTNIGALGS 155
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
S +++ IG +L T LGI ++
Sbjct: 156 ASLEVVAGPIGEALVATGLGIAVA 179
>gi|292493797|ref|YP_003529236.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582392|gb|ADE16849.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 208
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 9/143 (6%)
Query: 110 FTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
P + I + +IV Y + +DE E K I +
Sbjct: 57 LQEEPHPQAKGMIEHMIVQGL--VIVRTRPPYLRRH-LDEAFATQEKELKKFSTLIRSIV 113
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSP-----KILGTAIGVSLTGTLLGIILSYSLCNPLT 224
P +G++G ++G+I+ +L+ + I +L T +G++++ +
Sbjct: 114 VIAPLLGLLGTVVGMIETFESLADMALFTQSGGIAGGISQALFTTQMGLVVAIPGLL-IK 172
Query: 225 SQIKSTRLKQHRLYIIVKKALIA 247
+ + + +K L +
Sbjct: 173 GLLDRKQKQLEMELAQIKDLLCS 195
>gi|254448176|ref|ZP_05061639.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262302|gb|EDY86584.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 460
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
I + P +G++G + G+I L+ PK + I +L T+LG++ +
Sbjct: 364 IKLIAAVAPLLGLLGTVTGMISVFETLALSGAGDPKDMAGGISQALMTTVLGLVAA 419
>gi|110833914|ref|YP_692773.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
gi|110647025|emb|CAL16501.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
Length = 209
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDI----ILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G A + +M E I +++E K + + P +G++G ++G+I
Sbjct: 72 RILATGLANARHGREIMKESIQESATGVVHELEKFLSTLGSIAAITPLLGLLGTVVGMID 131
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + L I +L T G++++
Sbjct: 132 VFAAIMIHGTGDAAQLAGGISQALLTTAAGLVVA 165
>gi|192359531|ref|YP_001982256.1| MotA/TolQ/ExbB proton channel family domain-containing protein
[Cellvibrio japonicus Ueda107]
gi|190685696|gb|ACE83374.1| MotA/TolQ/ExbB proton channel family domain protein [Cellvibrio
japonicus Ueda107]
Length = 231
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
+++ + E + ++++ + + + + +P +G++G + G+I+ + S +
Sbjct: 109 EVMKDSIQEAANQVIHDLERYINILGTIANVVPLMGLLGTVFGMIEVFNAIMLQGSGNTG 168
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L I V+L T G++++
Sbjct: 169 VLAGGISVALYTTAFGLLVA 188
>gi|94496184|ref|ZP_01302762.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
gi|94424363|gb|EAT09386.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
Length = 234
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Query: 99 NHIDDPYNSTIFTSIPTV-LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE 157
ID Y + S P + +T + + +I + +M I +
Sbjct: 72 EDIDRFYEARGKGSFPAAKVMAAGVTEWRRSTAQKVIDREGTRDRLSTVMSSTIASEVDR 131
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGI 213
+ ++ +G P +G+ G + GI++A ++ + S ++ I +L T +G+
Sbjct: 132 LSDRLNILATIGSVAPFVGLFGTVWGIMRAFTSIAAEQNSSLAVVAPGIAEALFATAIGL 191
Query: 214 ILS 216
+
Sbjct: 192 FAA 194
>gi|325269494|ref|ZP_08136110.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
multiformis DSM 16608]
gi|324988113|gb|EGC20080.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
multiformis DSM 16608]
Length = 266
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + + SP I+ + V+L T+ GII
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQEAGDISPTIVAAGMKVALITTIFGII 224
Query: 215 LS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
++ N + S+I+ + I + A++
Sbjct: 225 VALVLQVFYNYILSKIEHITAQMEESAISLLDAIM 259
>gi|283778757|ref|YP_003369512.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283437210|gb|ADB15652.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 300
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PK 196
E+E M++ + +S +G P +G++G + G++ A ++ S
Sbjct: 162 EVEKAMEDATAEQSARLFRKVEYLSVVGNIAPMVGLLGTVTGMLLAFKEVADSEGNAGAA 221
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLT 224
L I +L T++G+I++
Sbjct: 222 QLADGIYQALVTTVVGLIIAIPSLGAFA 249
>gi|254786466|ref|YP_003073895.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
gi|237685694|gb|ACR12958.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
Length = 208
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + S ++M + I ++++ + A+ + P +G++G ++G+I
Sbjct: 72 RILAAGLSNSRHGRDVMKDSIQEAANQVIHDMERYLGALGTIAAIAPLLGLLGTVIGMIN 131
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
L+ + L I +L T G+ ++
Sbjct: 132 VFTALNLEGTGNAGALAGGISEALITTAAGLCVA 165
>gi|254446109|ref|ZP_05059585.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260417|gb|EDY84725.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 228
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLL 211
+ + + + P +G++G + G++ GN+S P + I +++T T++
Sbjct: 131 RMERGLVFLEIVVGAAPLLGLLGTVTGLVTVFGNVSLDTGLPEPALFTKGIAMAMTTTVM 190
Query: 212 GIILS 216
G+ ++
Sbjct: 191 GLTVA 195
>gi|283779768|ref|YP_003370523.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283438221|gb|ADB16663.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 278
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 70/185 (37%), Gaps = 24/185 (12%)
Query: 37 VAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE 96
+AG +G ++ + + L I + + ++ + + + G +
Sbjct: 75 IAGGYIGVIIILLSMVAVGFIVEHSLSIRKSRLMPEEALDQLEEWI-------AAGDLDA 127
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
+DP N ++ T I + E ++ ++E +
Sbjct: 128 ATQFCEDPRNHSL------------ATDVILAGLTRFRSSQFGFAEYKSAVEEAGEDYTA 175
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLL 211
+ +S +G P +G+ G + G++++ +++S P L +IG +L T L
Sbjct: 176 SLYRKTDVLSVIGAIAPMLGLFGTVEGMMESFNTIAESGGMARPDQLADSIGKALVTTWL 235
Query: 212 GIILS 216
G++++
Sbjct: 236 GLLVA 240
>gi|189183647|ref|YP_001937432.1| TolQ protein [Orientia tsutsugamushi str. Ikeda]
gi|189180418|dbj|BAG40198.1| TolQ protein [Orientia tsutsugamushi str. Ikeda]
Length = 229
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAI 202
++ + I + ++ + + P IG++G + GI+ + + + S ++ I
Sbjct: 117 IELTKNQISEQLETYLIVLATISSTAPFIGLLGTVWGIMHSFQAIAATKNTSIAVVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALLATAIGLFAA 190
>gi|119383479|ref|YP_914535.1| MotA/TolQ/ExbB proton channel [Paracoccus denitrificans PD1222]
gi|119373246|gb|ABL68839.1| outer membrane transport energization protein ExbB [Paracoccus
denitrificans PD1222]
Length = 431
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+++ +D I + ++ +G + P +G+ G + GI+ + +SQ +
Sbjct: 305 ERVDSHLDRIEAIAGRRMSRGTGVLATIGSTAPFVGLFGTVWGIMNSFIGISQAQTTNLA 364
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 365 VVAPGIAEALLATAIGLVAA 384
>gi|90418973|ref|ZP_01226884.1| TolQ biopolymer transport protein, tolerance to group A tolicins
[Aurantimonas manganoxydans SI85-9A1]
gi|90337053|gb|EAS50758.1| TolQ biopolymer transport protein, tolerance to group A tolicins
[Aurantimonas manganoxydans SI85-9A1]
Length = 238
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
I+ MD + + E ++ +G + P +G+ G ++GI+ + ++ S +
Sbjct: 117 RIDKAMDVTLAREMDELESRLGFLATIGSAAPFVGLFGTVIGIMTSFQAIAGSQQTSLAV 176
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 177 VAPGIAEALLATAIGLVAA 195
>gi|325295281|ref|YP_004281795.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065729|gb|ADY73736.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 206
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS------QSPKILGTAIGVSLTGTL 210
E + ++ + P +G+VG +LG+IK G L+ +P+ L I +L T+
Sbjct: 105 EIERGMPLLATIAAVSPLLGLVGTVLGMIKIFGVLTAGSTAIGNPQELSAGIAEALLTTV 164
Query: 211 LGIILS 216
G++++
Sbjct: 165 FGLLVA 170
>gi|198284024|ref|YP_002220345.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666202|ref|YP_002426668.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248545|gb|ACH84138.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518415|gb|ACK79001.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 227
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS---PKILGTAIGVSLTGTLLGIILSYSLCN 221
+ + P +G+ G I+G+ A L+ P + + +L T G+ ++
Sbjct: 116 LDTIITLAPLLGLFGTIIGMFHAFSVLATPGHAPTAVTGGVADALVATATGLFIAMLGLM 175
Query: 222 PLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+ + + VK L+ M+G
Sbjct: 176 AF-NAFNNQVRQILLQLDSVKTMLLNRMDGQP 206
>gi|262368604|ref|ZP_06061933.1| TolQ protein [Acinetobacter johnsonii SH046]
gi|262316282|gb|EEY97320.1| TolQ protein [Acinetobacter johnsonii SH046]
Length = 232
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILG 199
E ++ + + + A++ +G P +G+ G + GI+ A L+ +
Sbjct: 112 ERILRVGLSRDQSQLEQGLGALASIGSVAPYVGLFGTVWGIMNAFIGLADVDQVTLATVA 171
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 PGIAEALIATAIGLFAA 188
>gi|254482599|ref|ZP_05095838.1| protein TolQ [marine gamma proteobacterium HTCC2148]
gi|214037290|gb|EEB77958.1| protein TolQ [marine gamma proteobacterium HTCC2148]
Length = 236
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ R+ S I M + + ++ +G + P IG+ G +
Sbjct: 91 FKEFSRLAQQSEMDSEAILEGSRRAMRVAVMREEERLERHLAFLASVGSTSPYIGLFGTV 150
Query: 182 LGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
GI+ + L+ S + I +L T +G+ +
Sbjct: 151 WGIMHSFRGLANSTQATLATVAPGISEALVATAMGLFAA 189
>gi|300866206|ref|ZP_07110921.1| biopolymer transport protein [Oscillatoria sp. PCC 6506]
gi|300335799|emb|CBN56081.1| biopolymer transport protein [Oscillatoria sp. PCC 6506]
Length = 217
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 47/130 (36%), Gaps = 7/130 (5%)
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
+L+ N ++ + + + E ++ E + + + + P
Sbjct: 64 LLKQNADLPLPRIFLAALELEDPNPEEFRLALESEAQAEIPNLKRFNNFFDTIISLSPLF 123
Query: 176 GIVGAILGIIKAMGNL------SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
G++G +LG+I + +L + + I +L T G++++ + +
Sbjct: 124 GLLGTVLGLITSFASLKVGDVGGSKTAGVTSGISEALVSTASGLVVA-IFIMMFANTFRG 182
Query: 230 TRLKQHRLYI 239
L+Q L
Sbjct: 183 FYLRQIALIQ 192
>gi|221640392|ref|YP_002526654.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides KD131]
gi|221161173|gb|ACM02153.1| MotA/TolQ/ExbB proton channel precursor [Rhodobacter sphaeroides
KD131]
Length = 349
Score = 41.4 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++++ + ++ +G P +G+ G + GI+ A +SQ +
Sbjct: 226 ERVRSILERVEAQAGERLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLA 285
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 286 VVAPGIAEALLATGLGLVAA 305
>gi|163854966|ref|YP_001629264.1| TolQ colicin import protein [Bordetella petrii DSM 12804]
gi|163258694|emb|CAP40993.1| TolQ colicin import protein [Bordetella petrii]
Length = 226
Score = 41.4 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 119 NNELTTFICDYMRMIIVGNARSY------EIENLMDEEIDIILYEKLKPYHAISHMGESL 172
+ +T F+ R + G+ + + E+D + + ++ G
Sbjct: 87 DAGMTEFL-KARRTNVNGDINTLLDGPRRAMRAAYQREMDSLESHL----NFLASAGSVS 141
Query: 173 PAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
P IG++G + GI+ A + N+ Q + + I +L T +G+ +
Sbjct: 142 PYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIATAIGLFAA 189
>gi|91785205|ref|YP_560411.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
xenovorans LB400]
gi|91689159|gb|ABE32359.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
xenovorans LB400]
Length = 236
Score = 41.4 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 53/146 (36%), Gaps = 12/146 (8%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFI--------CDYMRMII 134
++ K+ + P S ++ T D ++
Sbjct: 40 SWILTRAKRQATRAIAQFWQAPTLSEGVAALRRADRERVFTPLAEAALHAAEVDIPGALL 99
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
RS + + + ++ ++ +G + P +G++G + GI A+G+++ S
Sbjct: 100 ARVERSERVLRALRQALNASQRRLEFGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAAS 159
Query: 195 ----PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 160 GQAQIENVAGPVGEALIMTAFGLVVA 185
>gi|167470907|ref|ZP_02335611.1| protein TolQ [Yersinia pestis FV-1]
Length = 225
Score = 41.4 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + + +G P IG+ G + GI+ A +L
Sbjct: 101 VIDGASRAMRIS--MNRELEALETH----IPFLGTVGSISPYIGLFGTVWGIMHAFISLG 154
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + IA
Sbjct: 155 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQHVNKLEQNYDNFMEEFIAI 213
Query: 249 MNGAI 253
++
Sbjct: 214 LHRQA 218
>gi|16127463|ref|NP_422027.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|221236276|ref|YP_002518713.1| TolQ protein [Caulobacter crescentus NA1000]
gi|13424917|gb|AAK25195.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|220965449|gb|ACL96805.1| TolQ protein [Caulobacter crescentus NA1000]
Length = 232
Score = 41.4 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ ++D +I + + +++ + + P IG+ G + GI+ A N+ + S +
Sbjct: 114 RIDRILDTQIARETTKVEEGLGSLAIVATASPFIGLFGTVWGIMHAFQNIALSKNTSLAV 173
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ +I +L T +G+I +
Sbjct: 174 VAPSIAEALFATAIGLIAA 192
>gi|113460405|ref|YP_718467.1| biopolymer transport protein [Haemophilus somnus 129PT]
gi|112822448|gb|ABI24537.1| Cell division and transport-associated protein TolQ [Haemophilus
somnus 129PT]
Length = 227
Score = 41.4 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
+I L L ++ + D+ KL L ++ N +E
Sbjct: 32 SWAIIIQRSRILTRALKDSTLFEERFWSGEDLYKLYDGLSN--RRNGLNSSER------- 82
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
IF E N L D II G++R+ + M+ E++ + ++
Sbjct: 83 --IF--YVGFKEFNRLKQANPDAPEAIIQGSSRAMNL--AMNREVEDLETR----VPFLA 132
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ P IG+ G + GI+ A LS + +++ I +L T +G+ +
Sbjct: 133 TVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGLFAA 186
>gi|160897904|ref|YP_001563486.1| protein TolQ [Delftia acidovorans SPH-1]
gi|160363488|gb|ABX35101.1| protein TolQ [Delftia acidovorans SPH-1]
Length = 234
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILG 199
M + E + +G P IG+ G + G++ A N+ Q + +
Sbjct: 111 RRAMRASFQREMDEVESGLSFLGTVGSVSPYIGLFGTVWGVMHAFTGFANMEQITLATVA 170
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 PGIAEALVATAMGLFAA 187
>gi|50120309|ref|YP_049476.1| colicin uptake protein TolQ [Pectobacterium atrosepticum SCRI1043]
gi|49610835|emb|CAG74280.1| TolQ protein [Pectobacterium atrosepticum SCRI1043]
Length = 228
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLSQRVGKLEQNYDNFTEEFIAILHRQA 221
>gi|329910417|ref|ZP_08275302.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Oxalobacteraceae bacterium IMCC9480]
gi|327546185|gb|EGF31231.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Oxalobacteraceae bacterium IMCC9480]
Length = 201
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEI-ENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+L N E + + + + +I + ++E +E + + + P
Sbjct: 60 ILANLEQNSPLGQVLAAGLRNVDAPRDIMKESIEEAGMASAHELERFLTTLGTIATLAPL 119
Query: 175 IGIVGAILGIIKAMG---NLSQSPKILGTAIGVSLTGTLLGIILS 216
+G+ G ++G+I+ G +P L I V+L T G+ ++
Sbjct: 120 MGLFGTVVGMIEIFGAQNATGANPAQLAHGISVALYNTGFGLAIA 164
>gi|148244815|ref|YP_001219509.1| biopolymer transport protein TolQ [Candidatus Vesicomyosocius
okutanii HA]
gi|146326642|dbj|BAF61785.1| biopolymer transport protein TolQ [Candidatus Vesicomyosocius
okutanii HA]
Length = 230
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 27/197 (13%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLY 83
+ ++Q ++V + ++ + K++ D+ S+ F Y+ T D+ KL Y
Sbjct: 13 SAGFVVQVVMFILVLMSIYSWTLILSKKKILIDTNKSIK--FFYQKFS--TNVDLEKLAY 68
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
S E IF + EL D + +I+ R+Y I
Sbjct: 69 QTFQESTNQSSME-----------RIFNA-----GYQELNYTTSDSSQELIINAERAYRI 112
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
N+ L + L ++ + S P IG+ G + GI+ + L+ + I+
Sbjct: 113 MNITANNEVDYLDDGL---SILAMIASSSPYIGLFGTVWGIMHSFIGLASVKQATIAIVA 169
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T G+ +
Sbjct: 170 PGIAEALIATAFGLFSA 186
>gi|227327553|ref|ZP_03831577.1| colicin uptake protein TolQ [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 225
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVGKLEQNYDNFTEEFIAILHRQA 218
>gi|82703417|ref|YP_412983.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82411482|gb|ABB75591.1| outer membrane transport energization protein ExbB [Nitrosospira
multiformis ATCC 25196]
Length = 215
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 110 FTSIPTVLENNELTTFICDYMRMIIVGNARSYE-IENLMDEEIDIILYEKLKPYHAISHM 168
+ + +L + + + ++I E+ +E +I + + +
Sbjct: 60 WADLEKILSGLDDRHYYKRFFEVVISNRHHPSWWTESRAADEAQLIETSLGRRLWVLETI 119
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ P +G+VG ++G+++A + +P + + +L T++G++++
Sbjct: 120 VTAAPLLGLVGTVIGMMRAFQVIGGEGVVNPTAVTGGVAEALIATVVGLLIA 171
>gi|170025181|ref|YP_001721686.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis YPIII]
gi|186894553|ref|YP_001871665.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis PB1/+]
gi|169751715|gb|ACA69233.1| protein TolQ [Yersinia pseudotuberculosis YPIII]
gi|186697579|gb|ACC88208.1| protein TolQ [Yersinia pseudotuberculosis PB1/+]
Length = 225
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + + +G P IG+ G + GI+ A +L
Sbjct: 101 VIDGASRAMRIS--MNRELEALETH----IPFLGTVGSISPYIGLFGTVWGIMHAFISLG 154
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + IA
Sbjct: 155 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQHVNKLEQNYDNFMEEFIAI 213
Query: 249 MNGAI 253
++
Sbjct: 214 LHRQA 218
>gi|295677679|ref|YP_003606203.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295437522|gb|ADG16692.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 238
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
RS + + + ++ ++ +G + P +G++G + GI A+G+++ S
Sbjct: 103 ERSERVLRALRQALNASHRRLEFGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQA 162
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 163 QIENVAGPVGEALIMTAFGLVVA 185
>gi|90426225|ref|YP_534595.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90108239|gb|ABD90276.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 237
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 117 QMRIEKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 176
Query: 196 KILGTAIGVSLTGTLLGIIL---SYSLCNPLTSQIKSTRLK 233
++ I +L T +G+I + N S++ +
Sbjct: 177 AVVAPGIAEALFATAIGLIAAIPATIFYNKFASEVNRQAQR 217
>gi|78355500|ref|YP_386949.1| biopolymer transport proteins-like [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78217905|gb|ABB37254.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 465
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQ 193
+ ++E +++ + L + I + P +G++G + GII+ + +
Sbjct: 345 DDAEQMERRLEQAVLEELPPLERFLQTIRVLAAISPLLGLLGTVSGIIQTFRIITAHGNG 404
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNP 222
PK+L I +L T G++++ L
Sbjct: 405 DPKLLSAGISEALLTTEAGLLVAIPLLLC 433
>gi|325107032|ref|YP_004268100.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324967300|gb|ADY58078.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 217
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAI-SHMGESLPAIGIVGAILGIIKAMGNLSQ---- 193
++ + E+ + + L+ A + + +S P +G++G + G+I+A ++
Sbjct: 95 PPSKLRQYLSEKFERDVLADLEYASAWINTIVKSAPMLGLLGTVSGMIQAFAKIADTQKT 154
Query: 194 --SPKILGTAIGVSLTGTLLGIILSYSLC 220
P L I +L T LG+ ++ L
Sbjct: 155 GGDPSALAGEISFALFTTALGLAVAIPLV 183
>gi|301057326|ref|ZP_07198444.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300448556|gb|EFK12203.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 467
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
IE+ + E I + A+ + P +G++G + G+I + + P+++
Sbjct: 347 IESSLAEAILKETPRLERFLPALKVLAAIAPLLGLLGTVTGMINTFHVITVHGTGDPRLM 406
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
I +L T LG+ ++ + +T+ + + ALIA
Sbjct: 407 AGGISEALITTQLGLAVAIPILV-VTALLGRKASRIASDMEEKAMALIA 454
>gi|187929874|ref|YP_001900361.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
gi|187726764|gb|ACD27929.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
Length = 206
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGT 200
+ +++E + + + +A+ + P +G+ G ++G+I+ G+ +P+ L
Sbjct: 93 KEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQALAH 152
Query: 201 AIGVSLTGTLLGIILS 216
I V+L T L ++++
Sbjct: 153 GISVALYNTALCLVVA 168
>gi|294661092|ref|YP_003572967.1| hypothetical protein Aasi_1464 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336242|gb|ACP20839.1| hypothetical protein Aasi_1464 [Candidatus Amoebophilus asiaticus
5a2]
Length = 229
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----- 193
+E M+ +Y K + + P +G +G +LG+I+A ++
Sbjct: 100 EPQNLEKSMELAGQTEIYRLEKNLSLLGAVAGIAPMLGFLGTVLGMIQAFMAMAHTTTAI 159
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+P++L I ++ T G+++
Sbjct: 160 TPQLLAGGIYEAMITTAAGLVVG 182
>gi|300722394|ref|YP_003711680.1| inner membrane protein [Xenorhabdus nematophila ATCC 19061]
gi|297628897|emb|CBJ89480.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA [Xenorhabdus
nematophila ATCC 19061]
Length = 226
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I ++ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 101 VITGASRAMRIS--LNRELETL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 154
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + +A
Sbjct: 155 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQTYDNFMEEFLAI 213
Query: 249 MNGAI 253
++
Sbjct: 214 LHRQA 218
>gi|299141406|ref|ZP_07034543.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris C735]
gi|298577366|gb|EFI49235.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris C735]
Length = 260
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + SP I+ + + V+L T+ GII
Sbjct: 158 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQTAGDISPTIVASGMKVALLTTIFGII 217
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I+ +
Sbjct: 218 VALILQVFYNYILSKIEHITSQ 239
>gi|241761366|ref|ZP_04759454.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753281|ref|YP_003226174.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|283856201|ref|YP_161896.2| MotA/TolQ/ExbB proton channel protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374273|gb|EER63770.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258552644|gb|ACV75590.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|283775197|gb|AAV88785.2| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 236
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+I + +++ + + + P +++ +G P +G+ G + GI+ + +
Sbjct: 109 VIDHEGERDRLSLSLEDAVAAAVEDMSSPLSSLATIGSVSPFVGLFGTVWGIMHSFSQIA 168
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
+ + I+G I +L T LG+ +
Sbjct: 169 AGGNTAMAIVGPGIAEALFSTALGLFAA 196
>gi|226355172|ref|YP_002784912.1| MotA/TolQ/ExbB proton channel family protein [Deinococcus deserti
VCD115]
gi|226317162|gb|ACO45158.1| putative MotA/TolQ/ExbB proton channel family protein [Deinococcus
deserti VCD115]
Length = 232
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + A+S + P +G++G ++G++++ SQ +P L T I
Sbjct: 96 MQSALLAEDSRLYAGLSALSTAAQVAPLLGLLGTVIGMVRSFLVFSQTSAPTPAQLATGI 155
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+L T G++++ + + +++ + V++ L
Sbjct: 156 SEALVNTAAGLVVA-IIAYVARNALRARADRIATQAERVREDL 197
>gi|86748932|ref|YP_485428.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86571960|gb|ABD06517.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 237
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 117 QMRIEKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 176
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 177 AVVAPGIAEALFATAIGLIAA 197
>gi|78222671|ref|YP_384418.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
gi|78193926|gb|ABB31693.1| outer membrane transport energization protein ExbB [Geobacter
metallireducens GS-15]
Length = 603
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 67/186 (36%), Gaps = 21/186 (11%)
Query: 36 IVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRN 95
I+ F+ A V ++L +I + +++ ++
Sbjct: 394 IIGLCTFMLFLAA---GVFVYKFLALQKIVKGNEMFLESFGELH-------------DPL 437
Query: 96 ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIIL 155
E+ DD +S+++ E + I + + I ++ ++
Sbjct: 438 ALEDTDDDLKHSSMYRIYQAGKIEIERWLARQSADKEISSLSPSALNIFRSSLDKANVKE 497
Query: 156 YEKLKPYHAISHMG-ESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTL 210
+ L + + +G P G++G + G++ +L++S + + + +L TL
Sbjct: 498 KQNLSSWLIVMTLGISGGPFWGLLGTVWGVMNTFASLAESGEANLTAIAPGVASALACTL 557
Query: 211 LGIILS 216
G+ ++
Sbjct: 558 FGLFVA 563
>gi|269148516|gb|ACZ28653.1| MotA/TolQ/ExbB proton channel [uncultured organism]
Length = 301
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 8/147 (5%)
Query: 78 VLKLLYILMYNLKKGSRNE--TENHIDDPYNSTIFTSIPTVLENNELTT-FICDYMRMII 134
V +L L + G R E I + ++ + + + +R +
Sbjct: 25 VAIILAKLFQFFRSGLRRSEFIEPVISALNDRQNNKALELLQQQRSPVARVMESAVRCGV 84
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
+ + E + + + +S + P +G++G + G+I A L +
Sbjct: 85 DPGMSAQDTEAEVSRVGSARIRDLESWLRGLSAIAHLSPLLGLLGTVTGMITAFMRLEEA 144
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
P IL I +L T G+ ++
Sbjct: 145 GNRVDPSILSGGIWEALLTTAFGLTVA 171
>gi|269139921|ref|YP_003296622.1| Tol-Pal system [Edwardsiella tarda EIB202]
gi|267985582|gb|ACY85411.1| Tol-Pal system [Edwardsiella tarda EIB202]
gi|304559756|gb|ADM42420.1| MotA/TolQ/ExbB proton channel family protein [Edwardsiella tarda
FL6-60]
Length = 224
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ ++ EI+ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISLNREIEAM--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLSLRVNKLEQNYENFMEEFIAILHRQA 218
>gi|300310500|ref|YP_003774592.1| biopolymer transport ExbB-like transmembrane protein
[Herbaspirillum seropedicae SmR1]
gi|300073285|gb|ADJ62684.1| biopolymer transport ExbB-like transmembrane protein
[Herbaspirillum seropedicae SmR1]
Length = 201
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQ 193
+A ++ ++E + + + + P +G+ G ++G+I+ +
Sbjct: 82 DAPREVMKEAIEEAGQAAAHRLERFLTTLGTIASLAPLMGLFGTVVGMIEIFASQNAAGT 141
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+P L I ++L T G+ ++
Sbjct: 142 NPAQLAHGISIALYNTGFGLAIA 164
>gi|330809804|ref|YP_004354266.1| membrane spanning protein TolQ [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377912|gb|AEA69262.1| putative membrane spanning protein TolQ [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 235
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ A LSQ S +
Sbjct: 111 VERALQVAISEQEIQLEKGLQFLATVGSVSPYIGLFGTVWGIMNAFIGLSQVQQASLSTV 170
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 APGIAEALIATAIGLFAA 188
>gi|302343723|ref|YP_003808252.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301640336|gb|ADK85658.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 462
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
IE+ + E I + + + P +G++G + G+I + +
Sbjct: 342 GQPQEVIESGLAEAILRETPRLERFLQVLKVLAGVSPLLGLLGTVTGMINTFNVITVHGT 401
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
P+++ I +L T G+I++ + S + +
Sbjct: 402 GDPRLMAGGISEALLTTEFGLIVAIPILI-AASLLSQKAQR 441
>gi|95929768|ref|ZP_01312509.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134064|gb|EAT15722.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 473
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
++N ++E + + K ++ P +G++G + G+I + +
Sbjct: 342 GQTQEVLDNALEEALMKQMPRFEKFLPTMAMFAAIAPLLGLLGTVTGMISTFQVITVFGT 401
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCN 221
PK++ I +L T +G+ ++ +
Sbjct: 402 GDPKMMSGGISEALITTQVGLAVAIPIML 430
>gi|117926836|ref|YP_867453.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
gi|117610592|gb|ABK46047.1| outer membrane transport energization protein ExbB [Magnetococcus
sp. MC-1]
Length = 203
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILG 199
E L+ + + ++ + + P IG++G + GI+ A+ L S S ++
Sbjct: 89 ERLLGQLLKTRRLHLENGLSFLASVSAAAPFIGLLGTVWGIMHALQGLGSENSASLALVA 148
Query: 200 TAIGVSLTGTLLGIILS 216
+ +L T LG+ +
Sbjct: 149 GPVAEALVATALGLFAA 165
>gi|251790485|ref|YP_003005206.1| colicin uptake protein TolQ [Dickeya zeae Ech1591]
gi|271499761|ref|YP_003332786.1| protein TolQ [Dickeya dadantii Ech586]
gi|247539106|gb|ACT07727.1| protein TolQ [Dickeya zeae Ech1591]
gi|270343316|gb|ACZ76081.1| protein TolQ [Dickeya dadantii Ech586]
Length = 228
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 44/115 (38%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ ++ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISLNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|268317077|ref|YP_003290796.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
gi|262334611|gb|ACY48408.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
Length = 238
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPK 196
EI + ++ +E K ++ + P +G +G + G+I+A + +P
Sbjct: 112 EIRDAVEAAGKYEAFELEKRMDILASIAGIAPMLGFLGTVTGMIEAFQQIQNLQGNVNPS 171
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L I +L T G+++
Sbjct: 172 VLAGGIWEALLTTAFGLVVG 191
>gi|307579946|gb|ADN63915.1| protein TolQ [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 256
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKIL 198
+ +M + + + ++++G + P +G+VG + GI+ M ++ S +
Sbjct: 139 QRVMRTNFMREMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAV 198
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 199 APGISEALFATAVGLFVA 216
>gi|288940687|ref|YP_003442927.1| protein TolQ [Allochromatium vinosum DSM 180]
gi|288896059|gb|ADC61895.1| protein TolQ [Allochromatium vinosum DSM 180]
Length = 224
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQ-SPKILG 199
E M + + ++ +G + P IG+ G + GI+ A+GN+ Q + ++
Sbjct: 110 ERSMRVALSREMDRLETNLAFLATVGSTSPYIGLFGTVWGIMQSFHALGNVEQATLALVA 169
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 170 PGISEALVATAIGLFAA 186
>gi|148284677|ref|YP_001248767.1| transport protein [Orientia tsutsugamushi str. Boryong]
gi|146740116|emb|CAM80289.1| transport protein [Orientia tsutsugamushi str. Boryong]
Length = 229
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAI 202
++ + I + ++ + + P IG++G + GI+ + + + S ++ I
Sbjct: 117 IELTKNQISEQLETYLIVLATISSTAPFIGLLGTVWGIMHSFQAIAATKNTSIAVVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALLATAIGLFAA 190
>gi|56476925|ref|YP_158514.1| TOLQ-related transport transmembrane protein [Aromatoleum
aromaticum EbN1]
gi|56312968|emb|CAI07613.1| TOLQ-related transport transmembrane protein [Aromatoleum
aromaticum EbN1]
Length = 224
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILG 199
M + + ++ +G P IG++G + GI+ A LS +
Sbjct: 111 RRAMRATYQREMDDLEAHLAFLASVGSVSPYIGLLGTVWGIMNAFRGLSNVSSATLAQVA 170
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 PGIAEALVATAIGLFAA 187
>gi|328952085|ref|YP_004369419.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328452409|gb|AEB08238.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 231
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSP 195
+++++M+ E + K + +G + P IG+ G +LGII A +L P
Sbjct: 93 EKVQHIMEGERLRVELYLGKRLGFLGTLGANAPFIGLFGTVLGIIHAFKDLALAEGGGGP 152
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++++
Sbjct: 153 AVMA-GIAEALVATAVGLLVA 172
>gi|197283944|ref|YP_002149816.1| biopolymer transport protein [Proteus mirabilis HI4320]
gi|194681431|emb|CAR40269.1| biopolymer transport protein [Proteus mirabilis HI4320]
Length = 336
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPK 196
+E M+ + I+ E + ++ +G P IG+ G + GI+ + + + +
Sbjct: 213 ERVEMRMERRVAAIIRELGRGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLA 272
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 273 VVAPGIAEALLATAIGLIAA 292
>gi|220924304|ref|YP_002499606.1| protein TolQ [Methylobacterium nodulans ORS 2060]
gi|219948911|gb|ACL59303.1| protein TolQ [Methylobacterium nodulans ORS 2060]
Length = 238
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I+ ++D I + ++ +G + P IG+ G + GI+ A ++ + S
Sbjct: 115 QRIDKVLDVTIQREVERLESRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLA 174
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
++ I +L T +G+ + S Q RL
Sbjct: 175 VVAPGIAEALFATAIGLFAAIPAVLAYNKLQASVAKAQGRL 215
>gi|22126934|ref|NP_670357.1| colicin uptake protein TolQ [Yersinia pestis KIM 10]
gi|45440869|ref|NP_992408.1| colicin uptake protein TolQ [Yersinia pestis biovar Microtus str.
91001]
gi|51595500|ref|YP_069691.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis IP 32953]
gi|108806596|ref|YP_650512.1| colicin uptake protein TolQ [Yersinia pestis Antiqua]
gi|108813037|ref|YP_648804.1| colicin uptake protein TolQ [Yersinia pestis Nepal516]
gi|145599840|ref|YP_001163916.1| colicin uptake protein TolQ [Yersinia pestis Pestoides F]
gi|149366879|ref|ZP_01888913.1| TolQ colicin import protein [Yersinia pestis CA88-4125]
gi|153950907|ref|YP_001401834.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis IP 31758]
gi|162420513|ref|YP_001605919.1| colicin uptake protein TolQ [Yersinia pestis Angola]
gi|165924350|ref|ZP_02220182.1| protein TolQ [Yersinia pestis biovar Orientalis str. F1991016]
gi|165938371|ref|ZP_02226929.1| protein TolQ [Yersinia pestis biovar Orientalis str. IP275]
gi|166011568|ref|ZP_02232466.1| protein TolQ [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211429|ref|ZP_02237464.1| protein TolQ [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399737|ref|ZP_02305255.1| protein TolQ [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419441|ref|ZP_02311194.1| protein TolQ [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423896|ref|ZP_02315649.1| protein TolQ [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|218928289|ref|YP_002346164.1| colicin uptake protein TolQ [Yersinia pestis CO92]
gi|229841058|ref|ZP_04461217.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229843162|ref|ZP_04463308.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229893999|ref|ZP_04509185.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Pestoides A]
gi|229903477|ref|ZP_04518590.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Nepal516]
gi|270487258|ref|ZP_06204332.1| protein TolQ [Yersinia pestis KIM D27]
gi|294503126|ref|YP_003567188.1| TolQ colicin import protein [Yersinia pestis Z176003]
gi|21959974|gb|AAM86608.1|AE013907_2 inner membrane protein [Yersinia pestis KIM 10]
gi|45435727|gb|AAS61285.1| TolQ colicin import protein [Yersinia pestis biovar Microtus str.
91001]
gi|51588782|emb|CAH20396.1| TolQ colicin import protein [Yersinia pseudotuberculosis IP 32953]
gi|108776685|gb|ABG19204.1| TolQ colicin import protein [Yersinia pestis Nepal516]
gi|108778509|gb|ABG12567.1| TolQ colicin import protein [Yersinia pestis Antiqua]
gi|115346900|emb|CAL19787.1| TolQ colicin import protein [Yersinia pestis CO92]
gi|145211536|gb|ABP40943.1| TolQ colicin import protein [Yersinia pestis Pestoides F]
gi|149291253|gb|EDM41328.1| TolQ colicin import protein [Yersinia pestis CA88-4125]
gi|152962402|gb|ABS49863.1| protein TolQ [Yersinia pseudotuberculosis IP 31758]
gi|162353328|gb|ABX87276.1| protein TolQ [Yersinia pestis Angola]
gi|165913749|gb|EDR32368.1| protein TolQ [Yersinia pestis biovar Orientalis str. IP275]
gi|165923410|gb|EDR40542.1| protein TolQ [Yersinia pestis biovar Orientalis str. F1991016]
gi|165989516|gb|EDR41817.1| protein TolQ [Yersinia pestis biovar Antiqua str. E1979001]
gi|166207200|gb|EDR51680.1| protein TolQ [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962182|gb|EDR58203.1| protein TolQ [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050445|gb|EDR61853.1| protein TolQ [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056745|gb|EDR66508.1| protein TolQ [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229679247|gb|EEO75350.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Nepal516]
gi|229689509|gb|EEO81570.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229697424|gb|EEO87471.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229703884|gb|EEO90897.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Pestoides A]
gi|262361162|gb|ACY57883.1| TolQ colicin import protein [Yersinia pestis D106004]
gi|262365282|gb|ACY61839.1| TolQ colicin import protein [Yersinia pestis D182038]
gi|270335762|gb|EFA46539.1| protein TolQ [Yersinia pestis KIM D27]
gi|294353585|gb|ADE63926.1| TolQ colicin import protein [Yersinia pestis Z176003]
gi|320014261|gb|ADV97832.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 228
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + + +G P IG+ G + GI+ A +L
Sbjct: 104 VIDGASRAMRIS--MNRELEALETH----IPFLGTVGSISPYIGLFGTVWGIMHAFISLG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + IA
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQHVNKLEQNYDNFMEEFIAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|251793060|ref|YP_003007786.1| protein TolQ [Aggregatibacter aphrophilus NJ8700]
gi|247534453|gb|ACS97699.1| protein TolQ [Aggregatibacter aphrophilus NJ8700]
Length = 229
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 34/190 (17%)
Query: 34 IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLK 90
I+I+ +I L + +D + D+ KL L +
Sbjct: 24 ILIIFSIT--------SWAIIIQRSRVLTKALKESMAFEDRFWSGEDLNKLYEGLSN--R 73
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
+ + +E IF E + L D II G+ R+ + M+ E
Sbjct: 74 RDGLSGSEQ---------IF--YVGFKEFSRLKQANPDAPEAIIKGSTRAMNLS--MNRE 120
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSL 206
I+ I ++ + P IG+ G + GI+ A +LS + +++ I +L
Sbjct: 121 IEDIETR----VPFLATVASISPYIGLFGTVWGIMHAFMSLSGAKQATLQMVAPGIAEAL 176
Query: 207 TGTLLGIILS 216
T +G+ +
Sbjct: 177 IATAIGLFAA 186
>gi|293393011|ref|ZP_06637328.1| MotA/TolQ/ExbB proton channel family protein [Serratia odorifera
DSM 4582]
gi|291424545|gb|EFE97757.1| MotA/TolQ/ExbB proton channel family protein [Serratia odorifera
DSM 4582]
Length = 222
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS----PKILGTAIGVSLTGTLLGIILS 216
+ + + P +G++G ++GII+ L+ S P ++ +G +L T LGI ++
Sbjct: 115 LETIVTAAPLLGLLGTVMGIIETFKALAASGVSEPSLVSAGMGTALYATGLGIAIA 170
>gi|240141618|ref|YP_002966098.1| membrane spanning protein in TolA-TolQ-TolR complex
[Methylobacterium extorquens AM1]
gi|240011595|gb|ACS42821.1| membrane spanning protein in TolA-TolQ-TolR complex
[Methylobacterium extorquens AM1]
Length = 232
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
S I+ ++D I + ++ +G + P IG+ G + GI+ A ++ + S
Sbjct: 108 SQRIDKVLDVTIQREVERLDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSL 167
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++ I +L T +G+ + +++++T K
Sbjct: 168 AVVAPGIAEALFATAIGLFAAIPAVL-AYNKLQATVAKSQSRLE 210
>gi|217033739|ref|ZP_03439165.1| hypothetical protein HP9810_7g20 [Helicobacter pylori 98-10]
gi|216943788|gb|EEC23228.1| hypothetical protein HP9810_7g20 [Helicobacter pylori 98-10]
Length = 516
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 64/200 (32%), Gaps = 39/200 (19%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDT--------YCDVLKLLYILMYNLKKGSRNET 97
V++N L K G + E F K L +D ++ K +
Sbjct: 135 VISNTLTQSKFVGRNGAECF-EKFLSKDYEKYLKNGVKMEIPKDFFGDFQKEANIKIKSL 193
Query: 98 ENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN--LMDEEIDIIL 155
E+HI + F + + E + I R + + N + DI+
Sbjct: 194 ESHIAKQKSFGDFQKVAKLEEKLQKCKIIKANTRSASITKEEAIYARNHPTLSTAKDIVS 253
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-------SPKILGT-------- 200
+ + A+G+ + G++ + N+ + + +
Sbjct: 254 HSHQAG----------MNALGVGALVSGVVSLITNICECVTKGIHPKEAIKHTATETLKG 303
Query: 201 ---AIGVSLTGTLLGIILSY 217
+ G++ G+LLG ++
Sbjct: 304 GVRSYGIAFWGSLLGGMMQN 323
>gi|209517608|ref|ZP_03266446.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209501904|gb|EEA01922.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 229
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 4/114 (3%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
G E++ +DE I + + + P +G+ G I+G+ A LS
Sbjct: 87 GQTSREELDACLDEAIMREAPNIDRFLWVLDTIVTLAPLLGLFGTIVGMFNAFQVLSNPG 146
Query: 195 --PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
P + + +L T G+ ++ + + + + VK AL+
Sbjct: 147 NAPTQVTGGVAEALIATASGLFVA-MIGLVFFNGLHTRVRGVVHQLETVKAALV 199
>gi|118588937|ref|ZP_01546344.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118438266|gb|EAV44900.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 223
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 47/119 (39%), Gaps = 12/119 (10%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL--- 191
V + R + + L+ A+ + + P +G+ G +LG+I+ L
Sbjct: 97 VRDIREERLREEISARAADRLFRLASWLKALDLVTQISPLLGLFGTVLGMIETFQTLQES 156
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI---KSTRLKQHRLYIIVKKAL 245
S +P L I V+L T G+ ++ P++ + ++ K+ ++ +
Sbjct: 157 GASANPATLAGGIWVALLTTACGLAVA----MPVSIAVTWFETRLEKERAALEVLLTGV 211
>gi|120434458|ref|YP_860162.1| ExbB-like MotA/TolQ/ExbB family biopolymer transport protein
[Gramella forsetii KT0803]
gi|117576608|emb|CAL65077.1| ExbB-like MotA/TolQ/ExbB family biopolymer transport protein
[Gramella forsetii KT0803]
Length = 267
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 8/206 (3%)
Query: 52 KVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFT 111
+ +K + F L + + I+ NL + + ++D NS
Sbjct: 59 QELKKRFIEGGPAFMGIVLLCLILGLAIAIERIIFLNLSTTNTRKLAQDVEDALNSGGVE 118
Query: 112 SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES 171
+ V N + Y + + + ++ + + + K +S
Sbjct: 119 AAKEVCRNTKGPVASIYYQGLDRADESIEAAEKAVV-AYGGVQMGQLEKNVSWVSLFIAL 177
Query: 172 LPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS---YSLCNPLT 224
P +G +G ++G+I+A + P ++ I V+L T+ G+I++ N +
Sbjct: 178 APMLGFMGTVIGMIQAFDRIEAAGDMQPSLVAGGIKVALLTTVFGLIVAIILQIFYNYII 237
Query: 225 SQIKSTRLKQHRLYIIVKKALIAYMN 250
++I S II+ L+AY N
Sbjct: 238 AKIDSIVNDMEDASIILIDMLVAYKN 263
>gi|83645477|ref|YP_433912.1| biopolymer transport protein [Hahella chejuensis KCTC 2396]
gi|83633520|gb|ABC29487.1| Biopolymer transport protein [Hahella chejuensis KCTC 2396]
Length = 211
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIIL----YEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + +M E I+ +E + A+ + P +G++G ++G+I
Sbjct: 72 RVLAAGLINAKHGREIMKESIEEEASHVVHELERFLTALGSVAAITPLLGLLGTVIGMID 131
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + + + L I +L T +G+ ++
Sbjct: 132 VFAEIQIAGTGNTQALAGGISKALITTAVGLTIA 165
>gi|297569525|ref|YP_003690869.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
gi|296925440|gb|ADH86250.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
Length = 210
Score = 41.4 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLL 211
+ + M P +GI+G ++GII + L + P + I +L T
Sbjct: 99 QRMRRFMGVLDTMITVAPLLGILGTVVGIINSFEMLEAAGIEEPGKVTAGIAQALITTAT 158
Query: 212 GIILSYSLCNP 222
G+ ++ P
Sbjct: 159 GLSIAIFAVFP 169
>gi|254483608|ref|ZP_05096831.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
gi|214036117|gb|EEB76801.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
Length = 122
Score = 41.4 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + P +G++G + G+I ++ PK + I +L T+LG++++
Sbjct: 28 LKIIAAVAPLMGLLGTVTGMIITFQAITIFGAGDPKAMAGGISGALITTVLGLLVA 83
>gi|218533104|ref|YP_002423920.1| protein TolQ [Methylobacterium chloromethanicum CM4]
gi|254564127|ref|YP_003071222.1| TolA-TolQ-TolR complex membrane anchored protein [Methylobacterium
extorquens DM4]
gi|218525407|gb|ACK85992.1| protein TolQ [Methylobacterium chloromethanicum CM4]
gi|254271405|emb|CAX27418.1| membrane spanning protein in TolA-TolQ-TolR complex
[Methylobacterium extorquens DM4]
Length = 238
Score = 41.4 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
S I+ ++D I + ++ +G + P IG+ G + GI+ A ++ + S
Sbjct: 114 SQRIDKVLDVTIQREVERLDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSL 173
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++ I +L T +G+ + +++++T K
Sbjct: 174 AVVAPGIAEALFATAIGLFAAIPAVL-AYNKLQATVAKSQSRLE 216
>gi|310779065|ref|YP_003967398.1| outer membrane transport energization protein ExbB [Ilyobacter
polytropus DSM 2926]
gi|309748388|gb|ADO83050.1| outer membrane transport energization protein ExbB [Ilyobacter
polytropus DSM 2926]
Length = 203
Score = 41.4 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
I + +KG+ ++ + ++ + +T +LE ++ +T+ ++ + Y
Sbjct: 29 SIYFASKEKGNFDDIKWNVKEYIEKGDYTGAFALLEKHDCSTYKVLKELLLQCTKNKDYS 88
Query: 143 IENLMDEEIDIILY---EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I ++ ++ ++ L + + + + P +G++G + G+I+A + + P
Sbjct: 89 IVHMEEKAREVGLSQLPRLERGMWLLGIVAHTTPLLGLLGTVTGMIQAFHAIASYGTGDP 148
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+L I +L T G+ ++
Sbjct: 149 SVLAEGISKALITTAGGLTVA 169
>gi|302877903|ref|YP_003846467.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302580692|gb|ADL54703.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 202
Score = 41.4 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG---NLSQS 194
+ ++ ++E ++ + + P +G+ G ++G+I+ G S
Sbjct: 83 STPEIMKESIEEAGRATSHDLEHFLTTLGTIASISPLLGLFGTVVGMIEIFGAQTAAGNS 142
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
P IL I V+L T G+I++
Sbjct: 143 PAILAHGISVALYNTAFGLIVA 164
>gi|94264751|ref|ZP_01288530.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93454797|gb|EAT05050.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 210
Score = 41.4 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLL 211
+ + M P +GI+G ++GII + L + P + I +L T
Sbjct: 99 QRMRRFMGVLDTMITVAPLLGILGTVVGIINSFEMLETAGIEEPGKVTAGIAQALITTAA 158
Query: 212 GIILSYSLCNP 222
G+ ++ P
Sbjct: 159 GLSIAIFSVFP 169
>gi|71275799|ref|ZP_00652083.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71900398|ref|ZP_00682531.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|170730221|ref|YP_001775654.1| TolQ protein [Xylella fastidiosa M12]
gi|71163377|gb|EAO13095.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71729830|gb|EAO31928.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|167965014|gb|ACA12024.1| TolQ protein [Xylella fastidiosa M12]
Length = 257
Score = 41.4 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKIL 198
+ +M + + + ++++G + P +G+VG + GI+ M ++ S +
Sbjct: 140 QRVMRTNFMREMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAV 199
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 200 APGISEALFATAVGLFVA 217
>gi|268323418|emb|CBH37006.1| hypothetical membrane protein, MotA/TolQ/ExbB proton channel family
[uncultured archaeon]
gi|268324053|emb|CBH37641.1| hypothetical membrane protein, MotA/TolQ/ExbB proton channel family
[uncultured archaeon]
Length = 205
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 78/208 (37%), Gaps = 11/208 (5%)
Query: 40 AGLGG-FVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETE 98
+G F+++N L + + LL + + + + + LK G RN E
Sbjct: 6 GIIGAMFMISNSL--LYPVIIILLGLVAWSLISVGQFLSEYASRNRDIAKLKAGCRNAHE 63
Query: 99 NHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK 158
HI + + N+ L FI D + + + L D E+ I
Sbjct: 64 -HIQKQEYNKAADVLNASGSNDLLKNFIADLVESLRESKFSVEAEKLLQDYELRITKE-- 120
Query: 159 LKPYHAISHMGESLPAIGIVGAILGI-IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSY 217
L+ ++ +G P G++G ++ + MG S + L T + V+ + T+LG++
Sbjct: 121 LEKARLVAKLG---PMFGLMGTLIPLGPALMGLTSGDIQQLATNMVVAFSTTVLGLLSG- 176
Query: 218 SLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ + K + V + L
Sbjct: 177 GIAYAIVVVKKRWYTQDLSDMEYVVEVL 204
>gi|257092031|ref|YP_003165672.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044555|gb|ACV33743.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 219
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEI-ENLMDEEIDIILYEKLKPYHAISHMGESL 172
P ++ N E + + + + A S EI + ++E ++ ++ + + +
Sbjct: 75 PDLIANLEADSPLGRVLGAGLRNVAASREIMKEAIEEAGSVVSHDLERYLTTLGTIASIS 134
Query: 173 PAIGIVGAILGIIKAMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
P +G+ G ++G+I+ G+ +P L I V+L T G++++
Sbjct: 135 PLMGLFGTVVGMIEIFGSQAPSGSNPIQLAHGISVALYNTGFGLLIA 181
>gi|227358185|ref|ZP_03842526.1| ExbB protein [Proteus mirabilis ATCC 29906]
gi|227161521|gb|EEI46558.1| ExbB protein [Proteus mirabilis ATCC 29906]
Length = 336
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPK 196
+E M+ + I+ E + ++ +G P IG+ G + GI+ + + + +
Sbjct: 213 ERVEMRMERRVAAIIRELGRGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLA 272
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 273 VVAPGIAEALLATAIGLIAA 292
>gi|268590339|ref|ZP_06124560.1| protein TolQ [Providencia rettgeri DSM 1131]
gi|291314248|gb|EFE54701.1| protein TolQ [Providencia rettgeri DSM 1131]
Length = 227
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G +R+ I M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 104 VVTGASRAMRIS--MNRELESV--EAHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + +A
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAF-NRLNLRVSKLEQNYDNFMEEFLAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|170747181|ref|YP_001753441.1| protein TolQ [Methylobacterium radiotolerans JCM 2831]
gi|170653703|gb|ACB22758.1| protein TolQ [Methylobacterium radiotolerans JCM 2831]
Length = 238
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
S IE +D I + ++ +G + P IG+ G + GI+ A ++ + S
Sbjct: 114 SQRIEKQLDVTIHREVERLESRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSL 173
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ I +L T +G+ + +++++ K A ++
Sbjct: 174 AVVAPGIAEALFATAIGLFAAIPAVL-AYNKLQAEVSKAQSRLESFADEFSAILS 227
>gi|86748366|ref|YP_484862.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86571394|gb|ABD05951.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 266
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + + ++ +G P +G+ G + GI+ A +S+ +
Sbjct: 139 ERVALRLERVEAAMSRRIARGTGILATIGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLA 198
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 199 VVAPGIAEALLATALGLVAA 218
>gi|89054621|ref|YP_510072.1| MotA/TolQ/ExbB proton channel [Jannaschia sp. CCS1]
gi|88864170|gb|ABD55047.1| outer membrane transport energization protein ExbB [Jannaschia sp.
CCS1]
Length = 228
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKI 197
++ E L K + + + + P +G+ G +LG+I A L P I
Sbjct: 99 FRARVEVEASERLDHLEKGFRMLDSIAQIAPLLGLFGTVLGMIDAFQALQSAGDAVDPSI 158
Query: 198 LGTAIGVSLTGTLLGIILS 216
L I V+L T G+ ++
Sbjct: 159 LAGGIWVALMTTAAGLGVA 177
>gi|70731074|ref|YP_260815.1| tolQ protein [Pseudomonas fluorescens Pf-5]
gi|68345373|gb|AAY92979.1| tolQ protein [Pseudomonas fluorescens Pf-5]
Length = 236
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 112 VERALYVAISEQETRLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATLSTV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|28198793|ref|NP_779107.1| TolQ protein [Xylella fastidiosa Temecula1]
gi|182681492|ref|YP_001829652.1| protein TolQ [Xylella fastidiosa M23]
gi|28056884|gb|AAO28756.1| TolQ protein [Xylella fastidiosa Temecula1]
gi|182631602|gb|ACB92378.1| protein TolQ [Xylella fastidiosa M23]
Length = 257
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKIL 198
+ +M + + + ++++G + P +G+VG + GI+ M ++ S +
Sbjct: 140 QRVMRTNFMREMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAV 199
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 200 APGISEALFATAVGLFVA 217
>gi|87309304|ref|ZP_01091440.1| probable tolQ protein [Blastopirellula marina DSM 3645]
gi|87287943|gb|EAQ79841.1| probable tolQ protein [Blastopirellula marina DSM 3645]
Length = 278
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
++ L + + + +G ++ E + EE + + + Y A+ +G P IG+
Sbjct: 140 DDTFLGKVLSAGLEKVSLGYDKALEAMQEVGEE-ENMKLDHRLSYLAL--IGSLSPMIGL 196
Query: 178 VGAILGII-----KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
G + G+I A+G + +P L I +L TL+G+ ++ S +++
Sbjct: 197 FGTVDGMIRAFSVIALGGSTPNPAQLAEGISTALMTTLVGLAIAIPAIASY-SILRNRVD 255
Query: 233 KQHRLYIIVKKALIA 247
+ I + L++
Sbjct: 256 RLALEVGITSEGLMS 270
>gi|87311604|ref|ZP_01093722.1| probable TolQ [Blastopirellula marina DSM 3645]
gi|87285726|gb|EAQ77642.1| probable TolQ [Blastopirellula marina DSM 3645]
Length = 238
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 63/159 (39%), Gaps = 12/159 (7%)
Query: 79 LKLLYILMYNLKKGSRNETENH-----IDDPYNSTIFTSIPTVLENNELTTFICDYMRMI 133
++ + M +K R+E + +++P +++ + E++ + M
Sbjct: 47 FCVIVVWMRVAEKRFRSEADQDAFLDAVEEPLLRGNYSAAEELCEDDSRAVPQLALLAMH 106
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ N+ + + ++D +L + + + + P +G++G + G++ A G L
Sbjct: 107 MRDNSYAQIKQMMLDRFQRDVLSDLEYRLSWVYTVIKGAPMVGLLGTVTGMMGAFGKLAA 166
Query: 192 -----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTS 225
+ + I ++L T G+ ++ L S
Sbjct: 167 GESGGADIATQMAEDISLALITTAAGLAIAIPLVFCTAS 205
>gi|190574648|ref|YP_001972493.1| putative transmembrane MotA/TolQ/ExbB transport protein
[Stenotrophomonas maltophilia K279a]
gi|190012570|emb|CAQ46198.1| putative transmembrane MotA/TolQ/ExbB transport protein
[Stenotrophomonas maltophilia K279a]
Length = 594
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 66/184 (35%), Gaps = 12/184 (6%)
Query: 37 VAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE 96
V A LG +M ++ G A+ +++ + + + ++ + +
Sbjct: 373 VVVAILG-LMMLLSWAIMIAKGRHFGRTSKANAVFTESFGKLSGVPLRTLSDMDRQGKAP 431
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
T H D I+ ++ Y+ + R+ ++ +M E + +
Sbjct: 432 TAMH--DGSLWRIYQVAIDEMQQRHQRDGNSGYLSGATIAAIRA-SMDAVMVREQEAMAR 488
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILG--IIKAMGNLSQ--SPKILGTAIGVSLTGTLLG 212
+ +S E P +G+ G ++G ++ + ++ + + +L T G
Sbjct: 489 RM----NWLSTTIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVAPGMAAALLCTAAG 544
Query: 213 IILS 216
+ ++
Sbjct: 545 LGVA 548
>gi|13235473|emb|CAC33632.1| TolQ protein [Rickettsia montanensis]
Length = 241
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 116 VLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAI 175
VL +E + + + N + I M + + + K ++ +G S P +
Sbjct: 97 VLAMDECKSLSTKGLSEGLKNNHKE-RITGAMYLAQNREVAKLEKNLSFLATVGSSAPFV 155
Query: 176 GIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
G+ G + GI+ + ++ + S ++ I +L T +G+ +
Sbjct: 156 GLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAA 200
>gi|77464499|ref|YP_354003.1| biopolymer transport protein, ExbB [Rhodobacter sphaeroides 2.4.1]
gi|77388917|gb|ABA80102.1| Biopolymer transport protein, ExbB [Rhodobacter sphaeroides 2.4.1]
Length = 349
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++++ + ++ +G P +G+ G + GI+ A +SQ +
Sbjct: 226 ERVRSILERVEAQAGERLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLA 285
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 286 VVAPGIAEALLATGLGLVAA 305
>gi|194366894|ref|YP_002029504.1| protein TolQ [Stenotrophomonas maltophilia R551-3]
gi|194349698|gb|ACF52821.1| protein TolQ [Stenotrophomonas maltophilia R551-3]
Length = 259
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 30/190 (15%)
Query: 35 VIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKK 91
+IV +G FV +I + ++ + D+ KL +
Sbjct: 52 IIVLALLVGSFV---SWVIIFRKARIFKQATREADEFENRFWSGADLGKLYSSATDRSRN 108
Query: 92 GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEI 151
E + F + D R+ G A+ + M
Sbjct: 109 VG--GLEAIFE-----AGFREYSR----------LRDKRRL--DGRAQLEGAQRAMRTTY 149
Query: 152 DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSL 206
+ + + ++++G + P +G+VG + GI+ M ++ S + I +L
Sbjct: 150 TREVDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGAQAGIAAVAPGISEAL 209
Query: 207 TGTLLGIILS 216
T +G+ ++
Sbjct: 210 FATAIGLFVA 219
>gi|330811390|ref|YP_004355852.1| Proton channel family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379498|gb|AEA70848.1| Proton channel family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 231
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 49/153 (32%), Gaps = 17/153 (11%)
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSI---------PTVLENNELTTFICDYMR 131
++ N+ + R E+ + ++ + + P ++ R
Sbjct: 38 IMIFQRSNMLRAGRRALESFEERFWSGIDLSKLYRQAGSNPDPDSGVEQIFRAGFKEFSR 97
Query: 132 MIIVGNARSYEIEN----LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
+ + M I + + ++ +G P IG+ G + GI+ +
Sbjct: 98 LRQQPGVDPEAVMEGVARAMRVAISREEEKLEQGLSFLATVGSVSPYIGLFGTVWGIMNS 157
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
L+ + + I +L T +G+ +
Sbjct: 158 FRGLASAQQATLATVAPGIAEALVATAIGLFAA 190
>gi|292490661|ref|YP_003526100.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291579256|gb|ADE13713.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 211
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILY----EKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G +M E I+ + E + + + + P +G++G ++G+IK
Sbjct: 72 RILAAGLVNRNHSREIMKESIEDVGRHVTLELERFLNTLGTIAAITPLLGLLGTVIGMIK 131
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +P +L I +L T G+ ++
Sbjct: 132 VFTVINTQGVGNPAVLAGGISEALITTAAGLAVA 165
>gi|315283532|ref|ZP_07871699.1| cell cycle protein FtsW [Listeria marthii FSL S4-120]
gi|313612824|gb|EFR86799.1| cell cycle protein FtsW [Listeria marthii FSL S4-120]
Length = 297
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 5 IGLFITILCIIGGFY-AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV--SL 61
+G + + II G G IL+ F + V G L VM NP + K
Sbjct: 75 LGTILVFIAIIVGMVFISGVTWKILLPVFSSIAVIGGTLIYLVMYNPGFLQKLGFKPYQF 134
Query: 62 LEIFGYKALGQDTYCDVLKLLYIL 85
I + +D D ++LL +
Sbjct: 135 KRITSWLRPEEDPLGDGMQLLRSM 158
>gi|294674494|ref|YP_003575110.1| MotA/TolQ/ExbB proton channel family protein [Prevotella ruminicola
23]
gi|294472321|gb|ADE81710.1| MotA/TolQ/ExbB proton channel family protein [Prevotella ruminicola
23]
Length = 280
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I P++G +G ++G++ A + Q P I+ + V+L T+ GII
Sbjct: 178 EKGCSWIKLFIAMAPSLGFLGTVIGMVMAFDQIQQVGDIGPTIVAQGMKVALITTIFGII 237
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ + + S+I+ +
Sbjct: 238 VALVLQLFYSYILSKIERLTAQ 259
>gi|167949014|ref|ZP_02536088.1| MotA/TolQ/ExbB proton channel [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 244
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+ ++ +DE I + + + + P +G++G + G+I+ +++
Sbjct: 120 EVDAETLQLRLDEAILKEIPRLRRGLPLVGILAAVAPLLGLLGTVTGMIETFQSITLFGA 179
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCN 221
P+++ I +L T LG+ + L
Sbjct: 180 GDPRLMSGGISQALVTTELGLAAAIPLVL 208
>gi|282877761|ref|ZP_06286574.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella buccalis ATCC 35310]
gi|281300077|gb|EFA92433.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella buccalis ATCC 35310]
Length = 276
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+I + SP I+ + V+L T+ GII
Sbjct: 176 EKGCSWITLFIAMAPSLGFLGTVIGMIMTFDQIQMAGDISPTIVAAGMKVALITTIFGII 235
Query: 215 LS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALI 246
++ N + S+I + I + AL+
Sbjct: 236 VALILQVFYNYILSKIDHITAQMEESAITLLDALM 270
>gi|254473148|ref|ZP_05086546.1| protein TolQ [Pseudovibrio sp. JE062]
gi|211957869|gb|EEA93071.1| protein TolQ [Pseudovibrio sp. JE062]
Length = 261
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ +MD I + K ++ +G + P +G+ G + GI+ A ++ + +
Sbjct: 141 QQRIDRVMDLTISREVERLEKRLLFLATIGSAAPFVGLFGTVWGIMNAFTSIAASKNTNL 200
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T LG+I +
Sbjct: 201 AVVAPGIAEALFATGLGLIAA 221
>gi|91775230|ref|YP_544986.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91775374|ref|YP_545130.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91709217|gb|ABE49145.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
gi|91709361|gb|ABE49289.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
Length = 249
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP---- 195
I M +I ++ +G P +G+ G + GI A+ ++SQS
Sbjct: 107 DEFIARAMRRQISAESERLDYGLTMLASVGSVAPFVGLFGTVWGIYHALASISQSGQATL 166
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
+ +G +L T LG+ ++ + ++ R
Sbjct: 167 DKVAGPVGEALIMTALGLAVAIPAVLAYNALVRRNR 202
>gi|15838498|ref|NP_299186.1| TolQ protein [Xylella fastidiosa 9a5c]
gi|9106995|gb|AAF84706.1|AE004010_3 TolQ protein [Xylella fastidiosa 9a5c]
Length = 257
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKIL 198
+ +M + + + ++++G + P +G+VG + GI+ M ++ S +
Sbjct: 140 QRVMRTNFMREMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAV 199
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 200 APGISEALFATAVGLFVA 217
>gi|319779493|ref|YP_004130406.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
gi|317109517|gb|ADU92263.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
Length = 239
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
+ I + A++ +G + P IG+ G + GI A+ N+S S + I
Sbjct: 109 LRNSIKQTMRRFEGGLTALASIGATAPFIGLFGTVWGIYHALINISAEGQMSIAAVAGPI 168
Query: 203 GVSLTGTLLGIILS 216
G +L T G+ ++
Sbjct: 169 GEALVATAAGLFVA 182
>gi|288802335|ref|ZP_06407775.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
melaninogenica D18]
gi|288335302|gb|EFC73737.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
melaninogenica D18]
Length = 277
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + + SP I+ + + V+L T+ GII
Sbjct: 173 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQEAGDISPTIVASGMKVALITTIFGII 232
Query: 215 LS 216
++
Sbjct: 233 VA 234
>gi|257095748|ref|YP_003169389.1| protein TolQ [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257048272|gb|ACV37460.1| protein TolQ [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 225
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 41/125 (32%), Gaps = 11/125 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
++ ++ N ++ + + ++ + ++ +G P +G+ G +
Sbjct: 90 FREFTKLRSQKNLDPKDVIDGSRRAMRATYQREMDSIDSHLAFLASVGSVSPYVGLFGTV 149
Query: 182 LGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNP---LTSQIKSTRLKQ 234
GI+ + LS + + I +L T +G+ + +I +
Sbjct: 150 WGIMHSFRGLSNVGQATLAAVAPGIAEALVATAIGLFAAIPAVVAYNRFAHEIDRLSSRF 209
Query: 235 HRLYI 239
Sbjct: 210 ESFME 214
>gi|167626690|ref|YP_001677190.1| group A colicin translocation protein TolQ [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|241667265|ref|ZP_04754843.1| group A colicin translocation; TolQ protein [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|167596691|gb|ABZ86689.1| group A colicin translocation; TolQ protein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 235
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D + E + + ++ P A++ +G P IG+VG + GI+
Sbjct: 94 LKDTGILRGDTILEGMERTVSIAIAQEAKELDRKLP--ALATIGAVSPYIGLVGTVWGIM 151
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ ++
Sbjct: 152 SSFNTLGGVEQATISVVAPHIAEALIATALGLFVA 186
>gi|148258092|ref|YP_001242677.1| TolQ protein [Bradyrhizobium sp. BTAi1]
gi|146410265|gb|ABQ38771.1| Cell division and transport-associated protein TolQ [Bradyrhizobium
sp. BTAi1]
Length = 237
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 117 QMRIEKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 176
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 177 AVVAPGIAEALFATAIGLIAA 197
>gi|310816580|ref|YP_003964544.1| MotA/TolQ/ExbB proton channel [Ketogulonicigenium vulgare Y25]
gi|308755315|gb|ADO43244.1| MotA/TolQ/ExbB proton channel [Ketogulonicigenium vulgare Y25]
Length = 216
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
IE MD I K ++ +G P +G+ G + GI+ A + + + +
Sbjct: 100 RIERAMDVVIGKESERLQKGLPVLATVGSVAPFVGLFGTVWGIMNAFVEIAAQQNTNLAV 159
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T LG++ +
Sbjct: 160 VAPGIAEALFATGLGLVAA 178
>gi|163854159|ref|YP_001642202.1| protein TolQ [Methylobacterium extorquens PA1]
gi|163665764|gb|ABY33131.1| protein TolQ [Methylobacterium extorquens PA1]
Length = 238
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
S I+ ++D I + ++ +G + P IG+ G + GI+ A ++ + S
Sbjct: 114 SQRIDKVLDVTIQREVERLDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSL 173
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++ I +L T +G+ + +++++T K
Sbjct: 174 AVVAPGIAEALFATAIGLFAAIPAVL-AYNKLQATVSKSQSRLE 216
>gi|91793511|ref|YP_563162.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91715513|gb|ABE55439.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 488
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPK 196
+ ++L+ + + E + AI+ P +G++G + G+I+ ++
Sbjct: 357 QQRDDLLLDSLIQTKREIERGLTAIAVTASVAPLLGLLGTVSGMIQTFKLMTLFGAGDAN 416
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+ I SL T LG+I++
Sbjct: 417 AVSGGISESLVTTELGLIVA 436
>gi|126736874|ref|ZP_01752609.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. SK209-2-6]
gi|126721459|gb|EBA18162.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. SK209-2-6]
Length = 227
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVSLTGTLL 211
+ A+ + + P +G+ G ++G+I+A L S P +L I V+L T
Sbjct: 107 RLERGLGALDMVAQLAPLMGLFGTVIGMIEAFQKLQSAGSSVDPSLLAGGIWVALLTTAA 166
Query: 212 GIILS 216
G+ ++
Sbjct: 167 GLAVA 171
>gi|170727418|ref|YP_001761444.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
gi|169812765|gb|ACA87349.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
Length = 451
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ ++E L + + IL E I + P +G++G + G+I +
Sbjct: 327 ENKDVDVETLELKLDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQTIQL 386
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+ P+++ I ++L T+ G++ + L + + + + ++ ++A
Sbjct: 387 FGTGDPRLMAGGISMALMTTVQGLVAALPLML-MHAIVIARSKSVVQVLEEQSAGIVA 443
>gi|187925355|ref|YP_001896997.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187716549|gb|ACD17773.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 238
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 51/146 (34%), Gaps = 12/146 (8%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM--------II 134
++ K+ + P S ++ T + ++
Sbjct: 40 SWILTRAKRQATRAIALFWQAPTLSEGVAALKRADRERVFTPLAEAALHASEVDIPGALL 99
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
R + + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 100 ARVERGERVLRALRQALSASQRRLEFGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAAS 159
Query: 195 ----PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 160 GQAQIENVAGPVGEALIMTAFGLVVA 185
>gi|83746174|ref|ZP_00943228.1| TolQ protein [Ralstonia solanacearum UW551]
gi|207728185|ref|YP_002256579.1| tolq-related transport protein [Ralstonia solanacearum MolK2]
gi|83727140|gb|EAP74264.1| TolQ protein [Ralstonia solanacearum UW551]
gi|206591430|emb|CAQ57042.1| tolq-related transport protein [Ralstonia solanacearum MolK2]
Length = 254
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 58/202 (28%), Gaps = 28/202 (13%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY---CDVLK 80
+ L+ +++ GL + I +L + + D+
Sbjct: 35 SIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDLQA 94
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT--VLENNELTTFICDYMRMIIVGNA 138
+ N E + + T + + + + MR
Sbjct: 95 MYQSAANNRHHTG--ALERIFEAGMREFLKTREQQRGIGDPSAILDASRRAMRAAYQREM 152
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----S 194
S E P+ ++ +G P IG+ G + GI+ A LS +
Sbjct: 153 DSL---------------ESHLPF--LASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQAT 195
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 196 LSAVAPGIAEALVATAIGLFAA 217
>gi|331010851|gb|EGH90907.1| tolQ protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 236
Score = 41.0 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R I + +E + I + K ++ +G P IG+ G + GI+ +
Sbjct: 100 RPGIEPDVVPSGVERALQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIG 159
Query: 191 LSQ----SPKILGTAIGVSLTGTLLGIILS 216
LSQ + + I +L T +G+ +
Sbjct: 160 LSQVQQATLSTVAPGIAEALIATAIGLFAA 189
>gi|326622471|gb|EGE28816.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 210
Score = 41.0 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 92 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 147
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 148 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 201
>gi|71901738|ref|ZP_00683810.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|71728510|gb|EAO30669.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
Length = 257
Score = 41.0 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKIL 198
+ +M + + + ++++G + P +G+VG + GI+ M ++ S +
Sbjct: 140 QRVMRTNFMREMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAV 199
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 200 APGISEALFATAVGLFVA 217
>gi|156310390|ref|XP_001617735.1| hypothetical protein NEMVEDRAFT_v1g225836 [Nematostella vectensis]
gi|156195550|gb|EDO25635.1| predicted protein [Nematostella vectensis]
Length = 154
Score = 41.0 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIIL----YEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R+I+ G + + +M E I +E + A+ + P +G++G ++G+IK
Sbjct: 17 RIIVAGLSNARHGREIMKESIQETASQVIHEMERFLTALGTIAAITPLLGLLGTVIGMIK 76
Query: 187 A----MGNLSQSPKILGTAIGVSLTGTLLGIILS 216
M + + +L I +L T G+ ++
Sbjct: 77 VFTEIMAQGTGNASVLAGGISEALITTAAGLAVA 110
>gi|118589612|ref|ZP_01547017.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118437698|gb|EAV44334.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 240
Score = 41.0 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
+ D M ++ G+ARS +L+ E+++ I +++ A + + ++ P IG++G +
Sbjct: 88 VADIMLKLVQGSARSDTRTDLLKEDVERICIQRINMLRAYLRPLDMIAQTAPLIGLLGTV 147
Query: 182 LGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILS---YSLCNPLTSQIKSTRLK 233
LG+I+A + P +L I V+L T +G+ ++ ++ S+I++ + +
Sbjct: 148 LGMIEAFQAMQGAGAAVDPSVLAGGIWVALLTTAVGLSVAIPVSAIVGWFDSRIEAEQSE 207
Query: 234 QHRLYIIVKKALIAYMNGAIPQVAIEY 260
L IA GA VA+E
Sbjct: 208 MEALVTAFFTGAIA-ERGAARIVALEA 233
>gi|329893682|ref|ZP_08269816.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
gi|328923609|gb|EGG30921.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
Length = 236
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILG 199
M + + ++ +G + P IG+ G + GI+ + L+ S +
Sbjct: 113 RRAMRVAMLREEERLEQNLSFLASVGSTSPYIGLFGTVWGIMHSFRGLASSSQATLATVA 172
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 173 PGISEALVATAMGLFAA 189
>gi|320539142|ref|ZP_08038813.1| membrane spanning protein in TolA-TolQ-TolR complex [Serratia
symbiotica str. Tucson]
gi|320030780|gb|EFW12788.1| membrane spanning protein in TolA-TolQ-TolR complex [Serratia
symbiotica str. Tucson]
Length = 227
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 41/115 (35%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI----L 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +
Sbjct: 112 MRISMNRELEALENH----ISFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLHMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKIEQNYGNFMEEFTAILHRQA 221
>gi|254521584|ref|ZP_05133639.1| protein TolQ [Stenotrophomonas sp. SKA14]
gi|219719175|gb|EED37700.1| protein TolQ [Stenotrophomonas sp. SKA14]
Length = 259
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D R+ G A+ + M + + + ++++G + P +G+VG + GI+
Sbjct: 126 LRDKRRL--DGRAQLEGAQRAMRTTYTREVDQLERNLELLANIGSTAPYVGLVGTVFGIM 183
Query: 186 KAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
M ++ S + I +L T +G+ ++
Sbjct: 184 VTMHDMISSGAQAGIAAVAPGISEALFATAIGLFVA 219
>gi|330947371|gb|EGH48043.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 138
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+E + ++I ++ +G + P IG+ G + GI++A+ ++ S S + +
Sbjct: 6 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAV 65
Query: 199 GTAIGVSLTGTLLGIILS 216
IG +L T +GI ++
Sbjct: 66 AGPIGHALVATGVGIAVA 83
>gi|302346731|ref|YP_003815029.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella melaninogenica ATCC 25845]
gi|302150523|gb|ADK96784.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella melaninogenica ATCC 25845]
Length = 277
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + + SP I+ + + V+L T+ GII
Sbjct: 173 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQEAGDISPTIVASGMKVALITTIFGII 232
Query: 215 LS 216
++
Sbjct: 233 VA 234
>gi|253584054|ref|ZP_04861252.1| ligand gated channel protein TolQ [Fusobacterium varium ATCC 27725]
gi|251834626|gb|EES63189.1| ligand gated channel protein TolQ [Fusobacterium varium ATCC 27725]
Length = 206
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ + +EI + H + + P +G++G + G+I A +L + P
Sbjct: 96 DQIIKEIEMDEISPLEKRL----HILGIIAHVAPMLGLLGTVTGMIDAFKDLAKFGAGDP 151
Query: 196 KILGTAIGVSLTGTLLGIILS 216
I+ +I +L T G+ ++
Sbjct: 152 TIVADSISKALITTAAGLSIA 172
>gi|157964385|ref|YP_001499209.1| hypothetical protein RMA_0432 [Rickettsia massiliae MTU5]
gi|157844161|gb|ABV84662.1| TolQ [Rickettsia massiliae MTU5]
Length = 244
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I M + + + K ++ +G S P +G+ G + GI+ + ++ + S
Sbjct: 124 ERIMGAMYLAQNREVEKLEKNLSFLATVGSSAPFVGLFGTVWGIMHSFQSIATSNNTSLA 183
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ +
Sbjct: 184 VVAPGIAEALLATAIGLFAA 203
>gi|153003047|ref|YP_001377372.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152026620|gb|ABS24388.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 209
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+ ++ I+ + + + +G + P IG+ G +LGI++A LS++P
Sbjct: 86 MGPDAVREVVSGTIERSRIDYEQRLAFLGTLGNNAPFIGLFGTVLGIVRAFFELSRNPGA 145
Query: 198 LG-----TAIGVSLTGTLLGIILS 216
G I +L T +G+ ++
Sbjct: 146 AGAGTVMAGISEALVATAVGLFVA 169
>gi|3913626|sp|P95375|EXBB_NEIMC RecName: Full=Biopolymer transport protein exbB
gi|1732297|gb|AAC44835.1| ExbB [Neisseria meningitidis]
Length = 220
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 120 NELTTFICDYMRMIIVGNARSYEIENLM----DEEIDIILYEKLKPYHAISHMGESLPAI 175
E F +Y R A++ + + + I+ A++ +G + P I
Sbjct: 78 QEALQFYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFI 137
Query: 176 GIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
G+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 138 GLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 182
>gi|258591850|emb|CBE68153.1| MotA/TolQ/ExbB proton channel precursor [NC10 bacterium 'Dutch
sediment']
Length = 225
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAI 202
M + + +++ +G P +G+ G +LGII+A + S + I
Sbjct: 111 MQRTTSAEISRLERYLGSLATLGNVSPFVGLFGTVLGIIRAFEAIAKVGSGGIGTVSAGI 170
Query: 203 GVSLTGTLLGIILS 216
+L T G+ ++
Sbjct: 171 AEALVATAAGLFVA 184
>gi|77164132|ref|YP_342657.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254435073|ref|ZP_05048580.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Nitrosococcus oceani AFC27]
gi|76882446|gb|ABA57127.1| outer membrane transport energization protein ExbB [Nitrosococcus
oceani ATCC 19707]
gi|207088184|gb|EDZ65456.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Nitrosococcus oceani AFC27]
Length = 174
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+ I M EI L+ L P I + LP +G++G ++G+I+ + + +
Sbjct: 69 AQRIREGMVAEISASLHRFLLP---IKTLAAVLPMLGLLGTVMGMIQVFDVMTVFGTGNA 125
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
+ I ++L T+ G++ + ++ ++ + +
Sbjct: 126 RGFAGGISIALITTMAGLVTA-LSGLYFSANLEHRAQRAIQ 165
>gi|254424587|ref|ZP_05038305.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
gi|196192076|gb|EDX87040.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
Length = 244
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS------- 192
+ ++ + L + + + P +G++G ++G+I ++G++
Sbjct: 87 PEVFKLALETSANEELASMRRGEKVLEAVIAIAPLLGLLGTVVGLINSLGSIDLNALGVG 146
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
+ IG +L T G+I++
Sbjct: 147 DATAGTALGIGEALISTAAGLIIA 170
>gi|187919305|ref|YP_001888336.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187717743|gb|ACD18966.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 215
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGT 209
I + K + + + + P +G++G I+G++ + P + + SL T
Sbjct: 106 IERDMSKGFWVLETIVTAAPLLGLLGTIVGMMHSFQLFGGTGLVDPAGVTGGVAQSLVAT 165
Query: 210 LLGI---ILSYSLCNPLTSQIKSTRLK 233
+G+ + + N + +++ +
Sbjct: 166 AIGLVVALFALFAFNYFSRRLERLMDE 192
>gi|257485271|ref|ZP_05639312.1| tolQ protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 236
Score = 41.0 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R I + +E + I + K ++ +G P IG+ G + GI+ +
Sbjct: 100 RPGIEPDVVPSGVERALQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIG 159
Query: 191 LSQ----SPKILGTAIGVSLTGTLLGIILS 216
LSQ + + I +L T +G+ +
Sbjct: 160 LSQVQQATLSTVAPGIAEALIATAIGLFAA 189
>gi|171914073|ref|ZP_02929543.1| MotA/TolQ/ExbB proton channel [Verrucomicrobium spinosum DSM 4136]
Length = 297
Score = 41.0 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 126 ICDYMRM-IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
D +R+ + + E+ M E++ + +S +G P +G++G + G+
Sbjct: 135 FSDTVRVSLSFIGDGQHATEDAMMGELNKFNAATTTRINYLSVIGVCTPMVGLLGTVTGM 194
Query: 185 IKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ A +L P L AIG L T G+ ++
Sbjct: 195 VTAFEHLGASGVGDPSGLSAAIGEVLIATASGLAIA 230
>gi|307730278|ref|YP_003907502.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307584813|gb|ADN58211.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 242
Score = 41.0 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDESVARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G +L T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAGPVGEALIMTAFGLFVA 189
>gi|255067246|ref|ZP_05319101.1| TonB system transport protein ExbB [Neisseria sicca ATCC 29256]
gi|255048614|gb|EET44078.1| TonB system transport protein ExbB [Neisseria sicca ATCC 29256]
Length = 219
Score = 41.0 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
+I N M++ + Y A++ +G + P IG+ G + GI A+ N+ Q S
Sbjct: 108 QIRNSMEQNMRQFDY----GMTALASIGSTAPFIGLFGTVWGIYHALINIGQSGQMSIAA 163
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +G+ ++
Sbjct: 164 VAGPIGEALVSTAIGLFVA 182
>gi|261868495|ref|YP_003256417.1| protein TolQ [Aggregatibacter actinomycetemcomitans D11S-1]
gi|293390511|ref|ZP_06634845.1| protein TolQ [Aggregatibacter actinomycetemcomitans D7S-1]
gi|261413827|gb|ACX83198.1| protein TolQ [Aggregatibacter actinomycetemcomitans D11S-1]
gi|290951045|gb|EFE01164.1| protein TolQ [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 229
Score = 41.0 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 67/190 (35%), Gaps = 34/190 (17%)
Query: 34 IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLK 90
I+I+ +I L + +D + D+ KL L +
Sbjct: 24 ILIIFSIT--------SWAIIIQRSRVLTKALKESMAFEDRFWSGEDLNKLYEGLSN--R 73
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
+ +E IF E + L D II G+ R+ + M+ E
Sbjct: 74 RDGLTGSEQ---------IF--YVGFKEFSRLKQANPDAPEAIIQGSTRAMNLS--MNRE 120
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSL 206
I+ + ++ + P IG+ G + GI+ A +LS + +++ I +L
Sbjct: 121 IEDLETR----VPFLATVASISPYIGLFGTVWGIMHAFLSLSGAKQATLQMVAPGIAEAL 176
Query: 207 TGTLLGIILS 216
T +G+ +
Sbjct: 177 IATAIGLFAA 186
>gi|261823525|ref|YP_003261631.1| MotA/TolQ/ExbB proton channel [Pectobacterium wasabiae WPP163]
gi|261607538|gb|ACX90024.1| MotA/TolQ/ExbB proton channel [Pectobacterium wasabiae WPP163]
Length = 238
Score = 41.0 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+E + ++I ++ +G + P IG+ G + GI+ A+ + S S
Sbjct: 96 PDRVERALQQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASL 155
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 156 DTVAGPIGNALIATGIGIAVA 176
>gi|254444893|ref|ZP_05058369.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198259201|gb|EDY83509.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 469
Score = 41.0 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
+ + M+ I + ++ P +G++G ++G+IK +
Sbjct: 343 SMTSQETLLDAMESCILRHRPRLERFLPILATTAAVAPLMGLLGTVVGMIKTFTLIEVFG 402
Query: 192 SQSPKILGTAIGVSLTGTLLGIILS 216
+ K L + I +L T LG+I++
Sbjct: 403 TGDAKSLSSGISEALVTTELGLIVA 427
>gi|134095666|ref|YP_001100741.1| putative biopolymer transport exbB-like protein [Herminiimonas
arsenicoxydans]
gi|133739569|emb|CAL62620.1| putative biopolymer transport protein ExbB-like [Herminiimonas
arsenicoxydans]
Length = 203
Score = 41.0 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 131 RMIIVGNARSYEIENLMDEEIDI----ILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G ++M E I+ +E + + + P +G+ G ++G+I+
Sbjct: 72 RVLAAGLRNVNAPRDVMKESIEEAGRGTAHELERFLTTLGTIATLAPLMGLFGTVVGMIE 131
Query: 187 AMGN-----LSQSPKILGTAIGVSLTGTLLGIILS 216
G+ +P L I ++L T G+ ++
Sbjct: 132 IFGSQNATGTGANPTQLAHGISIALYNTGFGLAIA 166
>gi|260222862|emb|CBA32854.1| Protein tolQ [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 242
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
M + E ++ +G P +G+ G + GI+ A L+ + +
Sbjct: 121 RRAMRASFQREMDEVESNLSFLASVGSVSPYVGLFGTVWGIMHAFTGLASLQQVTLSTVA 180
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 181 PGIAEALVATAIGLFAA 197
>gi|332991701|gb|AEF01756.1| hypothetical protein ambt_00995 [Alteromonas sp. SN2]
Length = 269
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 75/192 (39%), Gaps = 4/192 (2%)
Query: 7 LFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFG 66
+ + ++ I + +G + LI P +G + + + +L+ +
Sbjct: 13 VIVALVAIFITIFVVG--VFALILPVSEAKTGQINVGDVLFDRSSGMFPATLQNLMWLMF 70
Query: 67 YKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENNELTTF 125
+ LG + + + L E + + I+T I + +
Sbjct: 71 FIGLG-EMWVRHNRSAKELEQLKLYILPEEDDVMLRAKDLVPIYTGICERKVAQHFFVQR 129
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ + + G+ + + +LM+ ++++ +E ++ + ++ +P +G +G ++GI
Sbjct: 130 LTKRVILQFQGSNSADQANSLMNSSLELMQHEIELKFNMLRYLVWLIPTLGFIGTVVGIA 189
Query: 186 KAMGNLSQSPKI 197
A+ + + P +
Sbjct: 190 LALSSAADMPDV 201
>gi|281423536|ref|ZP_06254449.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris
F0302]
gi|281402356|gb|EFB33187.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris
F0302]
Length = 282
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + SP I+ + + V+L T+ GII
Sbjct: 180 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQTAGDISPTIVASGMKVALLTTIFGII 239
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I+ +
Sbjct: 240 VALILQVFYNYILSKIEHITSQ 261
>gi|190575565|ref|YP_001973410.1| putative TolQ transport transmembrane protein [Stenotrophomonas
maltophilia K279a]
gi|190013487|emb|CAQ47122.1| putative TolQ transport transmembrane protein [Stenotrophomonas
maltophilia K279a]
Length = 259
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D R+ G A+ + M + + + ++++G + P +G+VG + GI+
Sbjct: 126 LRDKRRL--DGRAQLEGAQRAMRTTYTREVDQLERNLELLANIGSTAPYVGLVGTVFGIM 183
Query: 186 KAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
M ++ S + I +L T +G+ ++
Sbjct: 184 VTMHDMISSGAQAGIAAVAPGISEALFATAIGLFVA 219
>gi|148653364|ref|YP_001280457.1| Tol-Pal system, TolQ [Psychrobacter sp. PRwf-1]
gi|148572448|gb|ABQ94507.1| Tol-Pal system, TolQ [Psychrobacter sp. PRwf-1]
Length = 263
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 59/155 (38%), Gaps = 16/155 (10%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPY-----NSTIFTSIPTVLENNELTTFI----CD 128
V+ + I + + G+ + H ++ + S ++ I + + L +
Sbjct: 47 VICWVLIFRLSARLGTAKRQDQHFENWFWSGEDLSKLYQGIQNSPDRHGLANIFYVGFSE 106
Query: 129 YMRMIIVGNARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
++RM + + I+ + + + ++ +G P IG+ G + GI+
Sbjct: 107 FLRMNKKRQPKDHIIDGVERKLRVGLGRQQQSLESGLAVLASIGSVSPYIGLFGTVWGIM 166
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A L+Q S + I +L T +G+ +
Sbjct: 167 NAFLGLAQVEQVSLSAVAPGIAEALIATAMGLFAA 201
>gi|119383435|ref|YP_914491.1| MotA/TolQ/ExbB proton channel [Paracoccus denitrificans PD1222]
gi|119373202|gb|ABL68795.1| Cell division and transport-associated protein TolQ [Paracoccus
denitrificans PD1222]
Length = 231
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ M+ I+ + ++ +G + P IG+ G + GI A + + S +
Sbjct: 114 RIDRAMNVTINRENDRLTRGLPFLATVGSTAPFIGLFGTVWGIKTAFEEIAISQNTSLAV 173
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T LG++ + +++ S + Y
Sbjct: 174 VAPGIAEALVATALGLLAAIPAVI-FYNKLSSDADRITGGYE 214
>gi|295676102|ref|YP_003604626.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295435945|gb|ADG15115.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 243
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + I + + +D +
Sbjct: 78 DNPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----ITRCLKDTMDESVARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G +L T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAGPVGEALIMTAFGLFVA 189
>gi|262038091|ref|ZP_06011496.1| biopolymer transport ExbB protein [Leptotrichia goodfellowii F0264]
gi|261747911|gb|EEY35345.1| biopolymer transport ExbB protein [Leptotrichia goodfellowii F0264]
Length = 211
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 127 CDYMRMIIVGNARSYE--IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
+ M + + S++ +E ++ E I + K + + + P +G++G + G+
Sbjct: 79 VNNMEIDLDKADHSHKQYVEEIITENILEQTMKLEKGMWLLGAVVNTAPQLGLLGTVTGM 138
Query: 185 IKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLC 220
I + LS +S + + + I +L T G++++
Sbjct: 139 IVSFSALSTNNTESARAVASGISEALYTTAFGLMVAIPFL 178
>gi|258405708|ref|YP_003198450.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257797935|gb|ACV68872.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 243
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 19/202 (9%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
A + +IQ IV+ L + +I L + K +
Sbjct: 3 IATHSGFWGMIQEATIVVQFVLALLAAMSVTSWAIILYKIFQLTQA-KRKVRQEAEQFAN 61
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ L M LK+ + + E + L + V
Sbjct: 62 ARDLATAMQQLKRNQNSAL-----------YLVGYEAISELHRLERSSLQSRQKAAVAAD 110
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QS 194
I ++ + + + + ++ G + P IG+ G + GI+ A + +
Sbjct: 111 N---IRRVLRRGVSKRMTQYAQNLAFLATCGNAAPFIGLFGTVWGIMHAFQTIGLEQTAA 167
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ ++
Sbjct: 168 LAAVAPGISEALVATAIGLAVA 189
>gi|33519795|ref|NP_878627.1| TolQ protein [Candidatus Blochmannia floridanus]
gi|33504140|emb|CAD83402.1| TolQ protein [Candidatus Blochmannia floridanus]
Length = 249
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI-------- 197
+M+ +++ L + I +G P +G+ G +LGII L + +
Sbjct: 108 VMNNTLNLELEKLESYIPLIGTIGSISPYVGLFGTVLGIIHVFIALDKISAVNSNHHMGH 167
Query: 198 ---LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ ++
Sbjct: 168 IHLIAPGIAEALISTAIGLFVA 189
>gi|188584488|ref|YP_001927933.1| protein TolQ [Methylobacterium populi BJ001]
gi|179347986|gb|ACB83398.1| protein TolQ [Methylobacterium populi BJ001]
Length = 238
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
S I+ ++D I + ++ +G + P IG+ G + GI+ A ++ + S
Sbjct: 114 SQRIDKVLDVTIQREVERLDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSL 173
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
++ I +L T +G+ + ++++++ K
Sbjct: 174 AVVAPGIAEALFATAIGLFAAIPAVL-AYNKLQASVAKSQSRLE 216
>gi|270263806|ref|ZP_06192074.1| MotA/TolQ/ExbB proton channel [Serratia odorifera 4Rx13]
gi|270041999|gb|EFA15095.1| MotA/TolQ/ExbB proton channel [Serratia odorifera 4Rx13]
Length = 216
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS----PKILGTAIGVSLTGTLLGIILS 216
+ + + P +G++G ++GII+ L+ S P ++ +G +L T LGI ++
Sbjct: 109 LETIVTAAPLLGLLGTVMGIIETFKALAASGVSEPSLVSAGMGTALYATGLGIAIA 164
>gi|254424788|ref|ZP_05038506.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
gi|196192277|gb|EDX87241.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
Length = 233
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
N ++ D + K + + P +G++G ++G+I+ NL+
Sbjct: 71 NPSPDSFRLALENAADKEFVKMRKGDKLLETVVAVAPLLGLLGTVIGLIRTFENLNIGGS 130
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILS 216
IG +L T G++++
Sbjct: 131 DGAIGATEAAGGIGEALITTAAGMVVA 157
>gi|83945424|ref|ZP_00957772.1| MotA/TolQ/ExbB proton channel family protein [Oceanicaulis
alexandrii HTCC2633]
gi|83851258|gb|EAP89115.1| MotA/TolQ/ExbB proton channel family protein [Oceanicaulis
alexandrii HTCC2633]
Length = 465
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 12/125 (9%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
M+ + E + + + IL E + I P +G++G + G+I+
Sbjct: 335 MLAYEEVKDRPTETIELKIDEAILRETPKLEFGLNFIKLAAAVAPLLGLLGTVTGMIRTF 394
Query: 189 GNL----SQSPKILGTAIGVSLTGTLLGIILS--YSLCNPLTSQIKSTRLKQHRLYIIVK 242
+ + P+I+ I +L T+ G+I + + + +
Sbjct: 395 TQITLFGTGDPRIMAGGISEALVTTVSGLIAAIPLLFIHSFAASFARGAQQTLEEQ---A 451
Query: 243 KALIA 247
+IA
Sbjct: 452 AGIIA 456
>gi|241662338|ref|YP_002980698.1| protein TolQ [Ralstonia pickettii 12D]
gi|240864365|gb|ACS62026.1| protein TolQ [Ralstonia pickettii 12D]
Length = 230
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIK 186
R + G I + + ++ + ++ +G P IG+ G + GI+
Sbjct: 100 RELQRGGGDPSAILDASRRAMRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMN 159
Query: 187 AMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A LS + + I +L T +G+ +
Sbjct: 160 AFRGLSNVQQATLSAVAPGIAEALVATAIGLFAA 193
>gi|152980817|ref|YP_001354069.1| ExbB transport protein [Janthinobacterium sp. Marseille]
gi|151280894|gb|ABR89304.1| ExbB transport protein [Janthinobacterium sp. Marseille]
Length = 591
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 68/205 (33%), Gaps = 22/205 (10%)
Query: 16 GGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
GF + + + +VI+ G +M ++ G + I A+ D +
Sbjct: 356 FGFILA----AMPLDAWLVVILLG-----VMMVLSWAIMISKGRNYGAISRANAIFMDHF 406
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
+ + N K + D +S+++ ++ + V
Sbjct: 407 RETAGAPLDQLANSSKLPQ-------DVKADSSLWRLYKVAVDEMRRRH--DRGYDLNAV 457
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG--IIKAMGNLSQ 193
NA I MD + + +S E P +G+ G ++G ++ + ++
Sbjct: 458 SNATISAIRAAMDGVMVRENERMSHRMNWLSTAIEGAPYVGLFGTVIGIMLVFVVAAMAG 517
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ + +L T G+ ++
Sbjct: 518 AVDINSVAPGMAAALLCTAAGLGVA 542
>gi|288957822|ref|YP_003448163.1| biopolymer transport protein [Azospirillum sp. B510]
gi|288910130|dbj|BAI71619.1| biopolymer transport protein [Azospirillum sp. B510]
Length = 244
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ ++ +E +M I + + ++ +G + P IG+ G + GI+ + +++
Sbjct: 116 TMKSSLQQRVERVMAVTIGREMARAERYMTFLASVGSTAPFIGLFGTVWGIMNSFTSIAG 175
Query: 194 SP----KILGTAIGVSLTGTLLGIILS 216
S ++ I +L T +G++ +
Sbjct: 176 SGNTSLAVVAPGIAEALFATAMGLLAA 202
>gi|213162799|ref|ZP_03348509.1| flagellar motor protein MotA [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 36
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
+G+SLPA GIV A++G++ A+G+ + LG I
Sbjct: 1 VGDSLPAFGIVAAVMGVVHALGSADRPAAELGALIA 36
>gi|88810804|ref|ZP_01126061.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
gi|88792434|gb|EAR23544.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
Length = 200
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNAR-SYEIENLMDEEIDIILYEKLKPYHAISHMGESL---PAIGIVGAILGIIK 186
RM+ G Y E +++ D +E ++ +G P +G++G ++G+IK
Sbjct: 61 RMLAAGLVNIQYGREIVLESIEDRGRHEAHGLERYLNTLGTIAAVSPLLGLLGTVIGMIK 120
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++S + L I +L T G++++
Sbjct: 121 VFSSISSAGLGNVTALAGGISQALFTTAAGLVVA 154
>gi|222086977|ref|YP_002545511.1| protein TolQ [Agrobacterium radiobacter K84]
gi|221724425|gb|ACM27581.1| protein TolQ [Agrobacterium radiobacter K84]
Length = 240
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 113 QMRIDRAMDVTLARESEHLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNL 172
Query: 196 KILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ I +L T +G+ +++Y+ + ++ + + +
Sbjct: 173 AVVAPGIAEALLATAIGLVAAIPAVIAYNKFSADAGKLSARMEGFADEFSAIL 225
>gi|187927777|ref|YP_001898264.1| protein TolQ [Ralstonia pickettii 12J]
gi|187724667|gb|ACD25832.1| protein TolQ [Ralstonia pickettii 12J]
Length = 230
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIK 186
R + G I + + ++ + ++ +G P IG+ G + GI+
Sbjct: 100 RELQRGGGDPSAILDASRRAMRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMN 159
Query: 187 AMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A LS + + I +L T +G+ +
Sbjct: 160 AFRGLSNVQQATLSAVAPGIAEALVATAIGLFAA 193
>gi|282849621|ref|ZP_06259005.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|282580558|gb|EFB85957.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
Length = 203
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 22/149 (14%)
Query: 73 DTYCDVLKLLYILMYNLKKGSRN--ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
Y + + ++ L L++ N ++ Y + I ++P VLE + + M
Sbjct: 34 AYYRQLKREMFALNDALEESEINWQSLLTSLESKYTANISYNLPRVLEQCQDRNVLQSKM 93
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KA 187
M + L +S + P +G++G + G+I +
Sbjct: 94 --------------EDMVAHVYTHASRGL---DWLSTIVTIAPLLGLLGTVTGMIGAFQV 136
Query: 188 MGNLSQSPKILGTAIGVSLTGTLLGIILS 216
G P + +G +L T G+ ++
Sbjct: 137 FGADGAVPTAITGGVGEALVATASGLCVA 165
>gi|183219574|ref|YP_001837570.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909715|ref|YP_001961270.1| TolQ-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|106879722|emb|CAJ90430.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167774391|gb|ABZ92692.1| Transport protein, TolQ-like protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167777996|gb|ABZ96294.1| Biopolymer transport ExbB protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 279
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 7/143 (4%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+ ++ + L + N+ D E +T + + M V
Sbjct: 99 LERMYFFFTAKLVRKGYNQDLQDAIDASGMQGVDEFLKANEGQRITDVLKNGME---VSQ 155
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---- 193
++ E ++ K +S + P +G +G + G+I A ++
Sbjct: 156 NDPEIFAAGIEREAGEVMTLLEKGLTVLSAVSTIAPLVGFLGTVSGMINAFDAIANADQV 215
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+ K++ I +L T G+I++
Sbjct: 216 NAKVVAGGIKEALITTAAGLIVA 238
>gi|85709675|ref|ZP_01040740.1| biopolymer transport ExbB protein [Erythrobacter sp. NAP1]
gi|85688385|gb|EAQ28389.1| biopolymer transport ExbB protein [Erythrobacter sp. NAP1]
Length = 265
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 76/235 (32%), Gaps = 37/235 (15%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG ++I+ +G F + ++F + +
Sbjct: 26 MEEGGPVA--WSILAVMIIM--SVGSFYILFT------------KLFEQNKVMRQYQ--- 66
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ + S E ++ + + +
Sbjct: 67 ----SVRQSFWRASSLKEGATKLEKNSAWRQLADDAVTAQEHHGK---------MEGAGQ 113
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
+ +E + + I ++ +G + P IG++G ++GI +A+ N+ S S
Sbjct: 114 EVHFVEEELAHSQNTINQSLSGGLSFLASVGATAPFIGLLGTVIGIYRALINIGIEGSAS 173
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYM 249
+ +G +L T +G++++ + ++S + L +++AY+
Sbjct: 174 IDKVAGPVGEALIMTAIGLLVAVPAVLAF-NWLQSRNRRIDALMTDFSNSIVAYI 227
>gi|332559388|ref|ZP_08413710.1| biopolymer transport protein, ExbB [Rhodobacter sphaeroides WS8N]
gi|332277100|gb|EGJ22415.1| biopolymer transport protein, ExbB [Rhodobacter sphaeroides WS8N]
Length = 219
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++++ + ++ +G P +G+ G + GI+ A +SQ +
Sbjct: 96 ERVRSILERVEAQAGERLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLA 155
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 156 VVAPGIAEALLATGLGLVAA 175
>gi|86749340|ref|YP_485836.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86572368|gb|ABD06925.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 671
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI----LGTAIGVSLTGTLLGIILS 216
++ P +G++G ++G++ ++ S + + I +L T+ G+ ++
Sbjct: 564 MLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVATVAGLGVA 620
>gi|91978611|ref|YP_571270.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91685067|gb|ABE41369.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 227
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 107 QMRIEKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 166
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 167 AVVAPGIAEALFATAVGLIAA 187
>gi|254875816|ref|ZP_05248526.1| TolQ protein [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254841837|gb|EET20251.1| TolQ protein [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 240
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ D + E + + ++ P A++ +G P IG+VG + GI+
Sbjct: 99 LKDTGILRGDTILEGMERTVSIAIAQEAKELDRKLP--ALATIGAVSPYIGLVGTVWGIM 156
Query: 186 KAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ L + ++ I +L T LG+ ++
Sbjct: 157 SSFNTLGGVEQATISVVAPHIAEALIATALGLFVA 191
>gi|183598185|ref|ZP_02959678.1| hypothetical protein PROSTU_01563 [Providencia stuartii ATCC 25827]
gi|188020351|gb|EDU58391.1| hypothetical protein PROSTU_01563 [Providencia stuartii ATCC 25827]
Length = 227
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G +R+ I M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 104 VVTGASRAMRIS--MNRELESV--EAHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + +A
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQSYDNFMEEFLAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|330721826|gb|EGG99800.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC2047]
Length = 239
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R+ +A ++ +M + + K ++ +G P +G+ G + GI+ +
Sbjct: 97 RIASDADAIINGVQRVMRVALAREEEKLEKHLSFLATVGSISPYVGLFGTVWGIMNSFRG 156
Query: 191 LSQ----SPKILGTAIGVSLTGTLLGIILS 216
L+ + + I +L T +G+ +
Sbjct: 157 LANVQQATLATVAPGISEALVATAMGLFAA 186
>gi|296327926|ref|ZP_06870461.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154882|gb|EFG95664.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 202
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
I + ++ + ++EI +S P +G++G + G+I+A N+S
Sbjct: 86 IDVQDYEFILKEVTNQEISPYERRLNLLASVMS----ISPMLGLLGTVTGMIRAFTNISK 141
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILSYSLC 220
++ I +L T G++++ +
Sbjct: 142 YGAGDAAVVADGIAEALLTTAAGLMIAIPVI 172
>gi|262477953|gb|ACY68246.1| ExbB [Lysobacter enzymogenes]
Length = 249
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ RS ++ + + + ++ +G + P +G++G + GI A+ L
Sbjct: 117 LVESLNRSEFVDRALRQAVTRESSRLEAGLTVLATVGSTAPFVGLLGTVWGIYHALLRLG 176
Query: 193 QSPKILGTAIGV----SLTGTLLGIILS 216
S + A+ +L T +G+ ++
Sbjct: 177 ASGESSIQAVAGPVGEALIMTAIGLFVA 204
>gi|218890818|ref|YP_002439682.1| putative tolQ-type transport protein [Pseudomonas aeruginosa
LESB58]
gi|218771041|emb|CAW26806.1| probable tolQ-type transport protein [Pseudomonas aeruginosa
LESB58]
Length = 211
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
++ ++E +++E + +A+ + P +G++G + G+I+ G +
Sbjct: 86 EIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSP 145
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L I +L T G++++
Sbjct: 146 MLAAGISKALITTAAGLLVA 165
>gi|186477338|ref|YP_001858808.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
gi|184193797|gb|ACC71762.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
Length = 250
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
RS + + + + ++ +G + P +G++G + GI A+G+++QS +
Sbjct: 102 ERSERVLRALRQALHRSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAQSGQA 161
Query: 198 LGTAIGV----SLTGTLLGIILS 216
+ + +L T G++++
Sbjct: 162 MIENVAGPVGEALIMTAFGLVVA 184
>gi|117923785|ref|YP_864402.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
gi|117607541|gb|ABK42996.1| Cell division and transport-associated protein TolQ [Magnetococcus
sp. MC-1]
Length = 230
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
G + M ++ L K ++ +G + P +G+ G + GI+ A L+ +
Sbjct: 102 DGGDLVTNVRRAMTVALNRELENLEKGLTFLATVGSTSPFVGLFGTVWGIMNAFLGLTGA 161
Query: 195 PK----ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 162 KASTLTMVAPGIAEALIATAMGLVAA 187
>gi|163869134|ref|YP_001610373.1| tolQ protein [Bartonella tribocorum CIP 105476]
gi|161018820|emb|CAK02378.1| tolQ protein [Bartonella tribocorum CIP 105476]
Length = 237
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
I+ MD + + ++ +G + P IG+ G ++GI+++ ++S S I
Sbjct: 113 RIDKAMDLTLGRESEKIESKLSFLATLGSAGPFIGLFGTVIGIMESFLSISASQNTSLAI 172
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 173 VAPGIAEALLATAIGLFAA 191
>gi|161504093|ref|YP_001571205.1| colicin uptake protein TolQ [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865440|gb|ABX22063.1| hypothetical protein SARI_02191 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 230
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|157368848|ref|YP_001476837.1| MotA/TolQ/ExbB proton channel [Serratia proteamaculans 568]
gi|157320612|gb|ABV39709.1| MotA/TolQ/ExbB proton channel [Serratia proteamaculans 568]
Length = 217
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS----PKILGTAIGVSLTGTLLGIILS 216
+ + + P +G++G ++GII+ L+ S P ++ +G +L T LGI ++
Sbjct: 110 LETIVTAAPLLGLLGTVMGIIETFKALAASGVSEPSLVSAGMGTALYATGLGIAIA 165
>gi|194365976|ref|YP_002028586.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
gi|194348780|gb|ACF51903.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 594
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 68/205 (33%), Gaps = 20/205 (9%)
Query: 16 GGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
GF + + +V + G +M ++ A+ +++
Sbjct: 360 FGFILK----AMPFDAWVVVAILG-----LMMLMSWAIMIAKSRHFGRTSKANAVFTESF 410
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
+ + + + + + T H D I+ ++ Y+ +
Sbjct: 411 GKLSGVPLRTLSEMDRQGKAPTAMH--DGSLWRIYQVAIDEMQQRHQRDGNSGYLSGATI 468
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG--IIKAMGNLSQ 193
R+ ++ +M E + + + +S E P +G+ G ++G ++ + ++
Sbjct: 469 AAIRA-SMDAVMVREQEAMARRM----NWLSTTIEGAPYVGLFGTVIGIMLVFVVAAMAG 523
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ + +L T G+ ++
Sbjct: 524 AVDINSVAPGMAAALLCTAAGLGVA 548
>gi|91978465|ref|YP_571124.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91684921|gb|ABE41223.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 267
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + ++ +G P +G+ G + GI+ A +S+ + ++ I
Sbjct: 146 LERVEAAMSRRIARGTGILATIGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGI 205
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 206 AEALLATALGLVAA 219
>gi|229591135|ref|YP_002873254.1| putative TolQ transport transmembrane protein [Pseudomonas
fluorescens SBW25]
gi|229363001|emb|CAY49951.1| putative TolQ transport transmembrane protein [Pseudomonas
fluorescens SBW25]
Length = 230
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I E K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 106 VERALQVAITEQEIELEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 165
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 166 APGIAEALIATAIGLFAA 183
>gi|120611968|ref|YP_971646.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120590432|gb|ABM33872.1| outer membrane transport energization protein ExbB [Acidovorax
citrulli AAC00-1]
Length = 238
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 53/180 (29%), Gaps = 18/180 (10%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
+ ++ L + L+I +K + + N
Sbjct: 20 AVAVLLLGMSLASWIVILIKALDIIKFKKHARGAR-------DFWHSEDFAAGMEKLGND 72
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
+P+ + + D + S I + ID
Sbjct: 73 PSNPFRHLALEGREATAHHRNTKAHLHDSL-------DVSDWITRSLRNCIDEFTARLQS 125
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI A+ + + + IG +L T LG+ ++
Sbjct: 126 GLAVLASVGSTAPFIGLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLAVA 185
>gi|148653313|ref|YP_001280406.1| MotA/TolQ/ExbB proton channel [Psychrobacter sp. PRwf-1]
gi|148572397|gb|ABQ94456.1| MotA/TolQ/ExbB proton channel [Psychrobacter sp. PRwf-1]
Length = 219
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
+E ++ +EI Y K + P IG+ G + GI A+ ++ +S + +
Sbjct: 72 VVEQVLMKEIGRYRYSGEKGLAILGTTAAIAPFIGLFGTVWGIFHALHSIGESGQAGLSQ 131
Query: 202 IGV----SLTGTLLGIILSYS--LCNPLTSQIKSTR 231
+ +L T LG+ ++ + + +I
Sbjct: 132 VAGPVGEALIMTGLGLAVAIPAVIFYNIAIRINRRT 167
>gi|78357196|ref|YP_388645.1| TolQ-like transport protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219601|gb|ABB38950.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 474
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLC 220
+S + P +G++G + G+I + + P+++ I +L T LG+ ++ +
Sbjct: 371 LSVLAAVAPLLGLLGTVTGMINTFQTITLYGTGDPRMMSGGISEALITTQLGLAVAVPIM 430
>gi|328947412|ref|YP_004364749.1| MotA/TolQ/ExbB proton channel [Treponema succinifaciens DSM 2489]
gi|328447736|gb|AEB13452.1| MotA/TolQ/ExbB proton channel [Treponema succinifaciens DSM 2489]
Length = 204
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
N +++ + ++D+ + E A++ + +G++G + G IKA G L
Sbjct: 82 NFSERDLKEFIQSKLDLAVPEFENNLSALNTISNVSTLLGLLGTVTGNIKAFGVLGNGGT 141
Query: 193 -QSPKILGTAIGVSLTGTLLGIILS 216
P +L AI +L T+ G++++
Sbjct: 142 MGDPALLAGAIAEALVTTVAGLVVA 166
>gi|315608823|ref|ZP_07883799.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
ATCC 33574]
gi|315249517|gb|EFU29530.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
ATCC 33574]
Length = 364
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + SP I+ + + V+L T+ GII
Sbjct: 263 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIELAGDISPTIVASGMKVALITTIFGII 322
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I+ +
Sbjct: 323 VALILQVFYNYILSKIEHITSQ 344
>gi|269958989|ref|YP_003328778.1| TolQ protein [Anaplasma centrale str. Israel]
gi|269848820|gb|ACZ49464.1| TolQ protein [Anaplasma centrale str. Israel]
Length = 228
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVS 205
E+ L + ++ +G S P IG++G + G++ ++ ++ S +G + +
Sbjct: 122 ELSRTLDKLEDNVEILATIGSSSPFIGLLGTVWGVVGSLRSIPTGVSVGIASVGPGVAEA 181
Query: 206 LTGTLLGIIL---SYSLCNPLTSQIKSTRLK 233
L T LG+++ + N T+ I +
Sbjct: 182 LFATALGLLVAIPANIFYNRFTALITRMSNR 212
>gi|209520630|ref|ZP_03269383.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209498913|gb|EDZ99015.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 243
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + I + + +D +
Sbjct: 78 DNPFVALALSGQEAADHHHQTQPHLHD--RMDVSDW-----ITRCLKDTMDESVARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G +L T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGASSQSSIDQVAGPVGEALIMTAFGLFVA 189
>gi|319956205|ref|YP_004167468.1| cell division and transport-associated protein tolq [Nitratifractor
salsuginis DSM 16511]
gi|319418609|gb|ADV45719.1| Cell division and transport-associated protein TolQ [Nitratifractor
salsuginis DSM 16511]
Length = 192
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLC 220
+S M + P IG+ G ++GI++A G L S S ++ AI +L T GI ++
Sbjct: 101 LSIMASTSPFIGLFGTVVGILEAFGRLGTQKSASLSVVAPAISEALIATAAGIFVA-VFA 159
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIA 247
+K + L + ++A
Sbjct: 160 YAFHLLLKRKAYELQSLLESQSEIVLA 186
>gi|157963338|ref|YP_001503372.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157848338|gb|ABV88837.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 469
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 19/138 (13%)
Query: 81 LLYI--LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
LLY L K S I S VL N + D M
Sbjct: 299 LLYWRPLAQLQKDDSAKADLLKIKQQLQSVSRVPAAKVLANAIVEGSCVDAM-------- 350
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----S 194
++ LM +++ + I+ + P +G++G + G+I+ +L++
Sbjct: 351 -DQRLKQLMLKQMAQFE----RGLGFIALLAAMAPMLGLLGTVSGMIETFQSLTEFGNSD 405
Query: 195 PKILGTAIGVSLTGTLLG 212
PK+L I +L T G
Sbjct: 406 PKLLSQGISKALITTQAG 423
>gi|91782684|ref|YP_557890.1| biopolymer transport transmembrane protein, MotA/TolQ/ExbB like
[Burkholderia xenovorans LB400]
gi|91686638|gb|ABE29838.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 242
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDESVARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G +L T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAGPVGEALIMTAFGLFVA 189
>gi|49079200|gb|AAT49865.1| PA2983 [synthetic construct]
Length = 212
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
++ ++E +++E + +A+ + P +G++G + G+I+ G +
Sbjct: 86 EIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSP 145
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L I +L T G++++
Sbjct: 146 MLAAGISKALITTAAGLLVA 165
>gi|75676904|ref|YP_319325.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74421774|gb|ABA05973.1| Cell division and transport-associated protein TolQ [Nitrobacter
winogradskyi Nb-255]
Length = 237
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 117 QMRIEKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 176
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 177 AVVAPGIAEALFATAIGLIAA 197
>gi|15598179|ref|NP_251673.1| tolQ-type transport protein [Pseudomonas aeruginosa PAO1]
gi|107102532|ref|ZP_01366450.1| hypothetical protein PaerPA_01003596 [Pseudomonas aeruginosa PACS2]
gi|116050985|ref|YP_790190.1| putative tolQ-type transport protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152985890|ref|YP_001347550.1| putative tolQ-type transport protein [Pseudomonas aeruginosa PA7]
gi|254235957|ref|ZP_04929280.1| hypothetical protein PACG_01912 [Pseudomonas aeruginosa C3719]
gi|254241689|ref|ZP_04935011.1| hypothetical protein PA2G_02397 [Pseudomonas aeruginosa 2192]
gi|296388524|ref|ZP_06877999.1| putative tolQ-type transport protein [Pseudomonas aeruginosa PAb1]
gi|313108225|ref|ZP_07794304.1| putative tolQ-type transport protein [Pseudomonas aeruginosa 39016]
gi|9949082|gb|AAG06371.1|AE004723_15 probable tolQ-type transport protein [Pseudomonas aeruginosa PAO1]
gi|115586206|gb|ABJ12221.1| putative tolQ-type transport protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126167888|gb|EAZ53399.1| hypothetical protein PACG_01912 [Pseudomonas aeruginosa C3719]
gi|126195067|gb|EAZ59130.1| hypothetical protein PA2G_02397 [Pseudomonas aeruginosa 2192]
gi|150961048|gb|ABR83073.1| probable tolQ-type transport protein [Pseudomonas aeruginosa PA7]
gi|310880806|gb|EFQ39400.1| putative tolQ-type transport protein [Pseudomonas aeruginosa 39016]
Length = 211
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
++ ++E +++E + +A+ + P +G++G + G+I+ G +
Sbjct: 86 EIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSP 145
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L I +L T G++++
Sbjct: 146 MLAAGISKALITTAAGLLVA 165
>gi|225023691|ref|ZP_03712883.1| hypothetical protein EIKCOROL_00554 [Eikenella corrodens ATCC
23834]
gi|224943573|gb|EEG24782.1| hypothetical protein EIKCOROL_00554 [Eikenella corrodens ATCC
23834]
Length = 218
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI A+ N+SQ + + IG +L T +G+ +
Sbjct: 125 ILASVGATAPFIGLFGTVWGIYHALENISQQGQVNIATVAGPIGEALVATAVGLFAA 181
>gi|260467062|ref|ZP_05813242.1| protein TolQ [Mesorhizobium opportunistum WSM2075]
gi|259029171|gb|EEW30467.1| protein TolQ [Mesorhizobium opportunistum WSM2075]
Length = 236
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
I+ MD + + + ++ G + P IG+ G ++GI+ + ++ S +
Sbjct: 114 RIDKAMDLALTREMEKLEGRLGFLATTGSAAPFIGLFGTVIGIMTSFQAIADSKNTSLAV 173
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 174 VAPGIAEALLATAIGLLAA 192
>gi|198283324|ref|YP_002219645.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667595|ref|YP_002425913.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247845|gb|ACH83438.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519808|gb|ACK80394.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 217
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 164 AISHMGESLPAIGIVGAILGII---KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLC 220
+ P +G++G I+G+ + +GN +P + + +L T G+ ++ +
Sbjct: 108 ILDTAVTLAPLLGLLGTIIGMFNAFQILGNPDTAPTAITGHVAEALVATATGLAIA-IVG 166
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
L + ++ +K + + + P +
Sbjct: 167 LVLFNGLQQRVRLVLHQMERIKVSTLNRLYRQPPSI 202
>gi|119946046|ref|YP_943726.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119864650|gb|ABM04127.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 197
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 55/146 (37%), Gaps = 14/146 (9%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
L + L+ + + E + + + + L+ + + + R +
Sbjct: 12 WLFFPLQAENIKDVELALSYWQQGPL-SKAQSSLKTRRPVSMLVQ----DAMAGMREQQS 66
Query: 144 ENLMDEEIDIILYEKLKPY----HAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----S 194
L+ + + +K+ + + + P +G++G +LG+I A +
Sbjct: 67 LTLLKQALSCQATDKINQFCMLLRPLEVIANLSPLLGLMGTVLGMISAFQKMEAAGNQVD 126
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLC 220
P IL I +L T++G+ ++ +
Sbjct: 127 PSILSGEIWQALLTTVVGLAVAIPVV 152
>gi|160872695|ref|ZP_02062827.1| protein TolQ [Rickettsiella grylli]
gi|159121494|gb|EDP46832.1| protein TolQ [Rickettsiella grylli]
Length = 233
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 22/117 (18%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R + + + ++ L+++ +D ++ +G + P IG+ G + GI+ A
Sbjct: 112 RAMRIAYSEQHQ---LLEKHLDF-----------LATLGSTSPYIGLFGTVWGIMTAFHA 157
Query: 191 LSQS-----PKILGTAIGVSLTGTLLGIILSYS---LCNPLTSQIKSTRLKQHRLYI 239
LS S ++ I +L T +G+ ++ N QI+ HR
Sbjct: 158 LSASQQTATIAMVAPGIAEALVATAMGLFVAIPAVIFYNRYAHQIQHLLHHYHRFQE 214
>gi|317491194|ref|ZP_07949630.1| TolQ protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920741|gb|EFV42064.1| TolQ protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 227
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLC 220
+ +G P IG+ G + GI+ A L + +++ I +L T +G+ +
Sbjct: 130 LGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAIGLFAAIPAV 189
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+++ K + Y + IA ++
Sbjct: 190 M-AYNRLNQRVNKLEQNYTNFMEEFIAILHRQA 221
>gi|311280383|ref|YP_003942614.1| protein TolQ [Enterobacter cloacae SCF1]
gi|308749578|gb|ADO49330.1| protein TolQ [Enterobacter cloacae SCF1]
Length = 230
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|212637632|ref|YP_002314157.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212559116|gb|ACJ31570.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 412
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ P +G++G + G+I + +Q +L I +L T LG++++
Sbjct: 317 MLAATAAVAPLLGLLGTVSGMIHTFEMMNLFGNQDQNMLAGGISEALVTTELGLVVA 373
>gi|162452529|ref|YP_001614896.1| TolQ protein [Sorangium cellulosum 'So ce 56']
gi|161163111|emb|CAN94416.1| TolQ protein [Sorangium cellulosum 'So ce 56']
Length = 238
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
R+ G+ R E++ ++ + + + Y ++ +G + P +G++G ++GI+ A
Sbjct: 98 RLPAQGHERDGVFESVSRALERQAQREVLSLKRGYGLLATVGSTAPFVGLLGTVMGIVTA 157
Query: 188 MGNLSQSPK----ILGTAIGVSLTGTLLGIILS 216
++ S + I +L T G+I++
Sbjct: 158 FQQMAASGSGGLGTVSAGIAEALITTAFGLIVA 190
>gi|88860776|ref|ZP_01135413.1| transport protein TolQ-like [Pseudoalteromonas tunicata D2]
gi|88817371|gb|EAR27189.1| transport protein TolQ-like [Pseudoalteromonas tunicata D2]
Length = 448
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 154 ILYEKLKPY--HAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLT 207
+ ++ Y AI+ P +G++G + G+I+ ++ + I +L
Sbjct: 337 LHHKHKLEYWLGAIAITAAVSPLLGLLGTVSGMIETFKLMTLFGAGDAAAVSGGISEALV 396
Query: 208 GTLLGIILSYSLCNPLT 224
T LG++++
Sbjct: 397 TTELGLVVAIPALLCHA 413
>gi|317503701|ref|ZP_07961718.1| MotA/TolQ/ExbB proton channel family protein [Prevotella salivae
DSM 15606]
gi|315665222|gb|EFV04872.1| MotA/TolQ/ExbB proton channel family protein [Prevotella salivae
DSM 15606]
Length = 282
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + SP I+ + + V+L T+ GII
Sbjct: 180 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQTAGDISPTIVASGMKVALLTTIFGII 239
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I+ +
Sbjct: 240 VALILQIFYNYILSKIEHITSQ 261
>gi|16759684|ref|NP_455301.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16764115|ref|NP_459730.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29142543|ref|NP_805885.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414138|ref|YP_151213.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62179319|ref|YP_215736.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161615021|ref|YP_001588986.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|194446660|ref|YP_002039986.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448001|ref|YP_002044779.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472247|ref|ZP_03078231.1| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194737848|ref|YP_002113853.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195874283|ref|ZP_02701529.2| protein TolQ [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197251691|ref|YP_002145706.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264867|ref|ZP_03164941.1| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197301124|ref|ZP_02663953.2| protein TolQ [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197363060|ref|YP_002142697.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198242904|ref|YP_002214715.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389466|ref|ZP_03216077.1| protein TolQ [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204929841|ref|ZP_03220862.1| protein TolQ [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205352009|ref|YP_002225810.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205357295|ref|ZP_02346581.2| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205357903|ref|ZP_02574124.2| protein TolQ [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205358370|ref|ZP_02655688.2| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205358899|ref|ZP_02665535.2| protein TolQ [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205359761|ref|ZP_02832120.2| protein TolQ [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205360773|ref|ZP_02686328.2| protein TolQ [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|207856189|ref|YP_002242840.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|25301390|pir||AE0592 TolQ protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16419255|gb|AAL19689.1| tol protein, membrane-spanning inner membrane protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16501977|emb|CAD05207.1| TolQ protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29138174|gb|AAO69745.1| tolQ protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56128395|gb|AAV77901.1| TolQ protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|62126952|gb|AAX64655.1| tol protein, membrane-spanning inner membrane proteins, required
for outer membrane integrity, uptake of group A
colicins, and translocation of phage DNA to cytoplasm
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161364385|gb|ABX68153.1| hypothetical protein SPAB_02781 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405323|gb|ACF65545.1| protein TolQ [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194406305|gb|ACF66524.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194458611|gb|EDX47450.1| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194713350|gb|ACF92571.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195629230|gb|EDX48598.1| protein TolQ [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197094537|emb|CAR60057.1| TolQ protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|197215394|gb|ACH52791.1| protein TolQ [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197243122|gb|EDY25742.1| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197288339|gb|EDY27720.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197937420|gb|ACH74753.1| protein TolQ [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199601911|gb|EDZ00457.1| protein TolQ [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204320835|gb|EDZ06036.1| protein TolQ [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205271790|emb|CAR36624.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322565|gb|EDZ10404.1| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205328903|gb|EDZ15667.1| protein TolQ [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205334681|gb|EDZ21445.1| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205340129|gb|EDZ26893.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205343116|gb|EDZ29880.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205347188|gb|EDZ33819.1| protein TolQ [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206707992|emb|CAR32281.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261246008|emb|CBG23810.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992486|gb|ACY87371.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157336|emb|CBW16825.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|322623637|gb|EFY20475.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322670514|gb|EFY66647.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322713790|gb|EFZ05361.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323129057|gb|ADX16487.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323231002|gb|EGA15118.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323260627|gb|EGA44236.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264698|gb|EGA48200.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|326627050|gb|EGE33393.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987682|gb|AEF06665.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 230
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|296162470|ref|ZP_06845261.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295887283|gb|EFG67110.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 243
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDESVARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G +L T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAGPVGEALIMTAFGLFVA 189
>gi|261343495|ref|ZP_05971140.1| protein TolQ [Providencia rustigianii DSM 4541]
gi|282568641|gb|EFB74176.1| protein TolQ [Providencia rustigianii DSM 4541]
Length = 227
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G AR+ I M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 104 VITGAARAMRIS--MNRELESV--ESHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + +A
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAF-NRLNLRVNKLEQSYDNFMEEFLAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|198283045|ref|YP_002219366.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665860|ref|YP_002425256.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247566|gb|ACH83159.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518073|gb|ACK78659.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 234
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 5/127 (3%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
G+AR N +DE I + K + + P +G+ G ILG+ A L+
Sbjct: 94 GSARGEAFANRLDEAIFLTTPSLDKRLWILDTIVTLAPLLGLFGTILGMFHAFSILAAPG 153
Query: 195 --PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
P + + +L T G+ ++ + + K +K L+ ++G
Sbjct: 154 HNPASVTGGVADALIATASGLFIAMIGLLSF-NAFNNAIEKTIFQLESLKVVLMNRLDG- 211
Query: 253 IPQVAIE 259
P V E
Sbjct: 212 APVVLEE 218
>gi|218781363|ref|YP_002432681.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762747|gb|ACL05213.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 489
Score = 40.6 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
++EN++ E I + + + + P +G++G + G+I + + P++
Sbjct: 365 DMENILGEAILRQIPRLERFLPTLGMLAAIAPLLGLLGTVTGMINTFHVITVAGTGDPRL 424
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T+LG+ ++
Sbjct: 425 MSGGISEALVTTMLGLAVA 443
>gi|146310893|ref|YP_001175967.1| colicin uptake protein TolQ [Enterobacter sp. 638]
gi|145317769|gb|ABP59916.1| Cell division and transport-associated protein TolQ [Enterobacter
sp. 638]
Length = 227
Score = 40.6 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|237653875|ref|YP_002890189.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
gi|237625122|gb|ACR01812.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
Length = 202
Score = 40.6 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + +M E I+ ++++ + + + P +G++G I+G+I
Sbjct: 72 RVLAAGLRNVHSPREVMKESIEETGRAVVHDLERFLTTLGTIASISPLMGLLGTIIGMID 131
Query: 187 AMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
+ +P L I ++L T LG+I++
Sbjct: 132 IFASQGVSGANPAQLAQGISIALYTTGLGLIIA 164
>gi|167948429|ref|ZP_02535503.1| MotA/TolQ/ExbB proton channel [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 221
Score = 40.6 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILY----EKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + +M E I+ + E + + + + P +G++G ++G+IK
Sbjct: 87 RILAAGLLNHRHSKEVMKESIEEVGRQVVLELERYLNTLGTIASITPLLGLLGTVIGMIK 146
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
G + +P IL I +L T G+ ++
Sbjct: 147 VFGAIVTAGVGNPGILAGGISEALITTATGLSVA 180
>gi|157146638|ref|YP_001453957.1| colicin uptake protein TolQ [Citrobacter koseri ATCC BAA-895]
gi|157083843|gb|ABV13521.1| hypothetical protein CKO_02404 [Citrobacter koseri ATCC BAA-895]
Length = 227
Score = 40.6 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|149921283|ref|ZP_01909738.1| MotA/TolQ/ExbB proton channel family domain protein [Plesiocystis
pacifica SIR-1]
gi|149817830|gb|EDM77293.1| MotA/TolQ/ExbB proton channel family domain protein [Plesiocystis
pacifica SIR-1]
Length = 229
Score = 40.6 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 8/98 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
I ++ G R+ EI+ ++E + K I + P +G++G ++G+I
Sbjct: 76 IVASLQAYADGKTRA-EIKEAVEEVGGREVAHLDKNVEIIGTVASITPLLGLLGTVVGMI 134
Query: 186 KAMGNLSQ-------SPKILGTAIGVSLTGTLLGIILS 216
+ +P + I +L T G++++
Sbjct: 135 QVFQRFVDAYANGQATPDVFAEGIWTALITTAYGLMVA 172
>gi|115372382|ref|ZP_01459691.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|310819523|ref|YP_003951881.1| tolq protein [Stigmatella aurantiaca DW4/3-1]
gi|115370595|gb|EAU69521.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|309392595|gb|ADO70054.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
Length = 228
Score = 40.6 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK---- 196
+ ++ + + + ++ +G + P +G++G +GI+ A ++++
Sbjct: 102 ESVARALERQAQREVQSLKRGLGVLATVGSTAPFVGLLGTTMGIVNAFQLMAEAGSGGLG 161
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+ I +L T G++++
Sbjct: 162 TISAGIAEALITTAFGLLVA 181
>gi|19704647|ref|NP_604209.1| biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714951|gb|AAL95508.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 202
Score = 40.6 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
I + ++ + ++EI +S P +G++G + G+I+A N+S
Sbjct: 86 IDVQDYEFILKEVTNQEISPYERRLNLLASVMS----ISPMLGLLGTVTGMIRAFTNISK 141
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILSYSLC 220
I+ I +L T G++++ +
Sbjct: 142 YGAGDAAIVADGIAEALLTTAAGLMIAIPVI 172
>gi|148261884|ref|YP_001236011.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|326405388|ref|YP_004285470.1| protein TolQ [Acidiphilium multivorum AIU301]
gi|146403565|gb|ABQ32092.1| Cell division and transport-associated protein TolQ [Acidiphilium
cryptum JF-5]
gi|325052250|dbj|BAJ82588.1| protein TolQ [Acidiphilium multivorum AIU301]
Length = 238
Score = 40.6 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+V ++ + I+ M + + ++ +G P +G+ G + GI+ + +
Sbjct: 111 DVVRSSVAERIDRAMGVTTMREMERLERYMVFLASIGAVAPFVGLFGTVWGIMHSFSAIA 170
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T +G++ +
Sbjct: 171 AMHNTNLAVVAPGIAEALFATAIGLVAA 198
>gi|115373681|ref|ZP_01460975.1| adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
gi|115369228|gb|EAU68169.1| adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
Length = 191
Score = 40.3 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 8/143 (5%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIF-TSIPTVLENNELTTFICDYMRMIIVGN 137
L L + +T ++ S +F + + + D +G
Sbjct: 14 LTFLDTFWKATRLEGIYQTAQGLEGSPLSKVFCAGYEELSKLAQAKE-GTDGAMSDRLGG 72
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---- 193
+ +E + + E + +G + P +G+ G ++GI+ A ++
Sbjct: 73 IEN--VERALHRAATTQITELEARVPFLGTVGAAAPFVGLFGTVIGILNAFNEIADKGNA 130
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G+ +
Sbjct: 131 TLSTVAAPVGNALFATAAGLFAA 153
>gi|85714383|ref|ZP_01045371.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85698830|gb|EAQ36699.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 237
Score = 40.3 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 117 QMRIEKVMNVSIAREIERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 176
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 177 AVVAPGIAEALFATAIGLIAA 197
>gi|297624601|ref|YP_003706035.1| MotA/TolQ/ExbB proton channel [Truepera radiovictrix DSM 17093]
gi|297165781|gb|ADI15492.1| MotA/TolQ/ExbB proton channel [Truepera radiovictrix DSM 17093]
Length = 243
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTL 210
+ ++ + + +G++G + G+I A +SQ +P L IG +L T
Sbjct: 99 EQRLTRGLRPLATIAQVATLLGLLGTVTGMIVAFAEISQQGTGNPAALAGGIGQALVTTA 158
Query: 211 LGIILS 216
G+I++
Sbjct: 159 AGLIVA 164
>gi|291613833|ref|YP_003523990.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583945|gb|ADE11603.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 201
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
+ ++ ++E ++ + + + P +G+ G ++G+I+ G+ +
Sbjct: 83 SAPEVMKESIEEAGRSAAHDLERFLTTLGTIASISPLLGLFGTVIGMIEIFGSQNAGGAA 142
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
P L I V+L T G+I++
Sbjct: 143 PTELAHGISVALYNTAYGLIVA 164
>gi|152993352|ref|YP_001359073.1| biopolymer ExbB/TolQ family transporter [Sulfurovum sp. NBC37-1]
gi|151425213|dbj|BAF72716.1| biopolymer transport protein, ExbB/TolQ family [Sulfurovum sp.
NBC37-1]
Length = 190
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILSYSLC 220
+S + + P IG+ G ++GI++ L ++ AI +L T GI ++
Sbjct: 101 LSIIASTAPFIGLFGTVIGILETFSKLGDQSSASLSVVAPAIAEALIATAAGIAVA-IFA 159
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+K + L + +++ +
Sbjct: 160 YTFHLILKRKAYELSSLLSSQSEVILSQVE 189
>gi|242279552|ref|YP_002991681.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242122446|gb|ACS80142.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 474
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLC 220
++ + P +G++G + G+I ++ P+++ I +L T LG+ ++ +
Sbjct: 371 LNVLAAVAPLLGLLGTVTGMISTFQIITLYGTGDPRMMSGGISEALVTTQLGLAVAVPIM 430
Query: 221 NPLTSQIKSTRLKQHRLYI 239
L + K
Sbjct: 431 I-LHHILDRRVDKIISDME 448
>gi|114706801|ref|ZP_01439701.1| putative transport transmembrane protein [Fulvimarina pelagi
HTCC2506]
gi|114537749|gb|EAU40873.1| putative transport transmembrane protein [Fulvimarina pelagi
HTCC2506]
Length = 241
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP---- 195
IE MD + + ++ +G + P +G+ G ++GI+ + ++ S
Sbjct: 115 QQRIEKAMDVTLAREMDHLESRLGFLATIGSAAPFVGLFGTVIGIMTSFQAIAGSQQTSL 174
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 175 AVVAPGIAEALLATAIGLVAA 195
>gi|7677130|gb|AAF67049.1|AF183382_9 flagellar motor protein MotA [Pseudomonas putida]
Length = 62
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
++IGL + + I+GG + GG+ L+ + L ++ +PL K + L
Sbjct: 4 LSLIGLILAFVAIVGGNFLEGGHAGALVNGPAAL----IVLAAALLQSPLSSFKRALQIL 59
Query: 62 LEI 64
I
Sbjct: 60 RWI 62
>gi|213028045|ref|ZP_03342492.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213051764|ref|ZP_03344642.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425395|ref|ZP_03358145.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213649141|ref|ZP_03379194.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213857295|ref|ZP_03384266.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224582564|ref|YP_002636362.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911678|ref|ZP_04655515.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289824365|ref|ZP_06543958.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|291084643|ref|ZP_06540569.2| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|224467091|gb|ACN44921.1| tolQ protein [Salmonella enterica subsp. enterica serovar Paratyphi
C strain RKS4594]
gi|312911772|dbj|BAJ35746.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085016|emb|CBY94805.1| Protein tolQ [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321226324|gb|EFX51375.1| MotA/TolQ/ExbB proton channel family protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322615821|gb|EFY12739.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621380|gb|EFY18236.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322628910|gb|EFY25690.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322634889|gb|EFY31619.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636583|gb|EFY33287.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641767|gb|EFY38401.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647824|gb|EFY44304.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651846|gb|EFY48215.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322652657|gb|EFY49006.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658464|gb|EFY54727.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664933|gb|EFY61124.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668398|gb|EFY64554.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322675254|gb|EFY71330.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679680|gb|EFY75721.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684844|gb|EFY80843.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193162|gb|EFZ78381.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200613|gb|EFZ85688.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202284|gb|EFZ87332.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323205448|gb|EFZ90414.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213512|gb|EFZ98305.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215347|gb|EGA00092.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221779|gb|EGA06186.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323228091|gb|EGA12227.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323234165|gb|EGA18254.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238140|gb|EGA22198.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243575|gb|EGA27593.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247400|gb|EGA31359.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251389|gb|EGA35261.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258473|gb|EGA42145.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323270962|gb|EGA54397.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 227
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|94501942|ref|ZP_01308451.1| MotA/TolQ/ExbB proton channel family protein [Oceanobacter sp.
RED65]
gi|94425936|gb|EAT10935.1| MotA/TolQ/ExbB proton channel family protein [Oceanobacter sp.
RED65]
Length = 220
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILSYSL 219
+ + P +G+ G +LG+I+A + P +L I +L T +G+ ++ +
Sbjct: 117 LEIIATLAPLLGLFGTVLGMIEAFKAMEAAGSQVDPAVLSGGIWQALLTTAVGLAVAIPV 176
Query: 220 CNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
+ ++ + ++ ++
Sbjct: 177 TL-IHGALEKRAENTAAQMENDIEFMLTHIA 206
>gi|291547810|emb|CBL20918.1| hypothetical protein CK1_30730 [Ruminococcus sp. SR1/5]
Length = 553
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 35/230 (15%), Positives = 79/230 (34%), Gaps = 52/230 (22%)
Query: 1 MSTIIGLFITILCI-IGGFYAMGGNPYILIQPFE---IVIVAGAGLGGFV--MANPLKVI 54
M+T++ L +T+ + + G +L ++I+ GL + M N + +
Sbjct: 6 MNTVLFLAVTVAAATLTAYVGKGSGNVLLYNFTFLGLMLIIYAVGLFAGLYRMDNLSRAL 65
Query: 55 KDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIP 114
K + E+F + L+ ++ Y
Sbjct: 66 KHGAGEITEVFQLPGRARKEEIGQLRGIFGDRYL-------------------------- 99
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
+ ++ F+ D + G A + N+ D ++ I + + +
Sbjct: 100 ----DKKMDDFV-DSISRTEEGIAEVEDFVNIEDVDVHIHK-------RLLEMAPDIFTS 147
Query: 175 IGIVGAILGIIKAMGN--------LSQSPKILGTAIGVSLTGTLLGIILS 216
+GI+G +G++ + N ++ S L I V+ ++ G+ LS
Sbjct: 148 LGILGTFIGLVWGLKNFQPTDYEVMTSSVSALVDGIKVAFLTSIYGVALS 197
>gi|260654395|ref|ZP_05859885.1| MotA/TolQ/ExbB proton channel family protein [Jonquetella anthropi
E3_33 E1]
gi|260631028|gb|EEX49222.1| MotA/TolQ/ExbB proton channel family protein [Jonquetella anthropi
E3_33 E1]
Length = 210
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
++ +L+ +EI + +S P +G++G ++G++ L S
Sbjct: 91 DLRDLLQQEIRREAFRWSWGLGFLSVTARVAPLLGLLGTVVGMVDIFQALPEVSSSPMTA 150
Query: 198 LGTAIGVSLTGTLLGIILS 216
L I +L T+ G+I++
Sbjct: 151 LAGGIYKALFTTVAGLIIA 169
>gi|115526698|ref|YP_783609.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115520645|gb|ABJ08629.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 227
Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 107 QMRIDKVMNVSIAREIERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 166
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 167 AVVAPGIAEALFATAIGLIAA 187
>gi|332298578|ref|YP_004440500.1| MotA/TolQ/ExbB proton channel [Treponema brennaborense DSM 12168]
gi|332181681|gb|AEE17369.1| MotA/TolQ/ExbB proton channel [Treponema brennaborense DSM 12168]
Length = 207
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-----Q 193
I + E D ++ E + + +G++G + G I+A G L
Sbjct: 84 PEDHIREAVSVETDTVIPELEHFLTPLGTIANISTLLGLLGTVTGNIQAFGLLGAGGSMG 143
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
P L AI +L T G+++S
Sbjct: 144 DPASLAGAIAEALVTTAAGLVVS 166
>gi|90408533|ref|ZP_01216690.1| tol protein, membrane-spanning inner membrane protein, required for
outer membrane integrity, uptake of group A
[Psychromonas sp. CNPT3]
gi|90310352|gb|EAS38480.1| tol protein, membrane-spanning inner membrane protein, required for
outer membrane integrity, uptake of group A
[Psychromonas sp. CNPT3]
Length = 227
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E + A++ +G P IG+ G + GI+ A L Q S ++ I
Sbjct: 113 MRVVLSREVEELEEGLSALATIGSISPYIGLFGTVWGIMNAFMALGQVQQASLNMVAPGI 172
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + ++ + ++ YI + + + ++
Sbjct: 173 AEALIATAMGLFAAIPAVM-AYNRYTAKMMRLETAYINLMEEFTSILHRQA 222
>gi|317152291|ref|YP_004120339.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316942542|gb|ADU61593.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 475
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLC 220
++ + P +G++G + G+I + + P+++ I +L T LG+ ++ +
Sbjct: 372 LNVLAAVAPLLGLLGTVTGMINTFQIITVYGTGDPRMMSGGISEALITTQLGLAVAVPIM 431
Query: 221 NPLTSQIKSTRLK 233
L ++ +
Sbjct: 432 I-LHHVLERRVDR 443
>gi|254524713|ref|ZP_05136768.1| transport protein ExbB2 [Stenotrophomonas sp. SKA14]
gi|219722304|gb|EED40829.1| transport protein ExbB2 [Stenotrophomonas sp. SKA14]
Length = 594
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 69/205 (33%), Gaps = 20/205 (9%)
Query: 16 GGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY 75
GF + + +V + G +M ++ A+ +++
Sbjct: 360 FGFILK----AMPFDAWVVVAILG-----LMMLLSWAIMIAKSRHFGRTSKANAVFTESF 410
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
+ + + ++ + + T H D I+ ++ Y+ +
Sbjct: 411 GKLSGVPLRTLSDMDRQGKAPTAMH--DGSLWRIYQVAIDEMQQRHQRDGNSGYLSAATI 468
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG--IIKAMGNLSQ 193
R+ ++ +M E + + + +S E P +G+ G ++G ++ + ++
Sbjct: 469 AAIRA-SMDAVMVREQEGMARRM----NWLSTTIEGAPYVGLFGTVIGIMLVFVVAAMAG 523
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ + +L T G+ ++
Sbjct: 524 AVDINSVAPGMAAALLCTAAGLGVA 548
>gi|206580447|ref|YP_002239641.1| protein TolQ [Klebsiella pneumoniae 342]
gi|238893773|ref|YP_002918507.1| colicin uptake protein TolQ [Klebsiella pneumoniae NTUH-K2044]
gi|288936482|ref|YP_003440541.1| protein TolQ [Klebsiella variicola At-22]
gi|290510461|ref|ZP_06549831.1| TolQ [Klebsiella sp. 1_1_55]
gi|206569505|gb|ACI11281.1| protein TolQ [Klebsiella pneumoniae 342]
gi|238546089|dbj|BAH62440.1| inner membrane protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|288891191|gb|ADC59509.1| protein TolQ [Klebsiella variicola At-22]
gi|289777177|gb|EFD85175.1| TolQ [Klebsiella sp. 1_1_55]
Length = 230
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|306841382|ref|ZP_07474085.1| tonB-system energizer ExbB [Brucella sp. BO2]
gi|306288567|gb|EFM59916.1| tonB-system energizer ExbB [Brucella sp. BO2]
Length = 329
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 193 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 252
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 253 TTNLAVVAPGIAEALLATAIGLVAA 277
>gi|294054024|ref|YP_003547682.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293613357|gb|ADE53512.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 264
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L + + + G+ I+ DE + L + + + + P +G++G +
Sbjct: 126 LLNILHNGLETTTNGHFDEQTIDKAFDEAASVELAKPFVFINYLQVIASVAPMVGLLGTV 185
Query: 182 LGIIKAMGNLSQS----PKILGTAIGVSLTGTLLGIILS 216
G++KA +++ P++L I +L T G+ ++
Sbjct: 186 SGMVKAFRTIAEQGMGRPELLADNISEALITTASGLTVA 224
>gi|254293574|ref|YP_003059597.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
gi|254042105|gb|ACT58900.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
Length = 455
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
+E +DE I + + I + P +G++G ++G+I+ + +
Sbjct: 331 QDDVEALELRLDEAILKETPKIDSFVNLIKVLAAVSPMMGLLGTVVGMIRTFTQITLVGT 390
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLCN 221
PK + I +L T+ G++ + L
Sbjct: 391 GDPKTMADGISQALVTTVEGLVAAIPLIL 419
>gi|50120210|ref|YP_049377.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
gi|49610736|emb|CAG74181.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
Length = 258
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
+ +D + ++ +G + P IG++G + GI A+ +S + +
Sbjct: 112 LSNTLDTNSGKLQSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPV 171
Query: 203 GVSLTGTLLGIILS 216
G +L T G+ ++
Sbjct: 172 GEALIMTAFGLFVA 185
>gi|323525501|ref|YP_004227654.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323382503|gb|ADX54594.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 242
Score = 40.3 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDESVARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G +L T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAGPVGEALIMTAFGLFVA 189
>gi|330968208|gb|EGH68468.1| tolQ protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 236
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 112 VERSLQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|291286749|ref|YP_003503565.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290883909|gb|ADD67609.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 207
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ------S 194
+++E+++ + L K H + +G P +G+ G ++G++ A ++ +
Sbjct: 87 HDLEHIVSNKGVQELQRFNKNLHIMELIGRIAPMLGLSGTVVGMVAAFQAVASSTGGAVN 146
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
P +L + I SL T+ G+ +
Sbjct: 147 PALLASGIWESLLTTVAGLFVG 168
>gi|260576648|ref|ZP_05844635.1| protein TolQ [Rhodobacter sp. SW2]
gi|259021133|gb|EEW24442.1| protein TolQ [Rhodobacter sp. SW2]
Length = 231
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ MD I K ++ +G + P IG+ G + GI A + + + +
Sbjct: 115 RIDRSMDVAIAKESESLNKGLSFLATVGSTAPFIGLFGTVWGIKHAFEQIAISQNTNLAV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T +G++ + +++ S Y
Sbjct: 175 VAPGIAEALLATAIGLVAAIPAVV-FYNKLNSDSEHIIGGYE 215
>gi|227114772|ref|ZP_03828428.1| colicin uptake protein TolQ [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 225
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLSLRVGKLEQNYDNFTEEFIAILHRQA 218
>gi|82703830|ref|YP_413396.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82411895|gb|ABB76004.1| Cell division and transport-associated protein TolQ [Nitrosospira
multiformis ATCC 25196]
Length = 228
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 4/98 (4%)
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ + + M + ++ +G P +G+ G +
Sbjct: 93 REFMKHRRQPGMDTGTAMDSTRRAMRATYQREMDRLESHLSFLATVGSVSPYVGLFGTVW 152
Query: 183 GIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
GI+ + LS + + I +L T +G+ +
Sbjct: 153 GIMNSFRGLSNVAQATIAHVAPGIAEALIATAMGLFAA 190
>gi|49474662|ref|YP_032704.1| biopolymer transport exbB protein [Bartonella quintana str.
Toulouse]
gi|49240166|emb|CAF26630.1| Biopolymer transport exbB protein [Bartonella quintana str.
Toulouse]
Length = 280
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
V I +L+ + + ++ +G P +G+ + GI+ + +++S
Sbjct: 148 VNEGVKERIRSLLSRCLLANMRRVACGSAVLATIGAIAPFVGLFATVWGIMNSFIGIAES 207
Query: 195 P----KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ ++
Sbjct: 208 QITRLDVVAPGIAEALLATAVGLFVA 233
>gi|325981321|ref|YP_004293723.1| protein TolQ [Nitrosomonas sp. AL212]
gi|325530840|gb|ADZ25561.1| protein TolQ [Nitrosomonas sp. AL212]
Length = 226
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
+ V + + E+D + ++ +G P IG++G + GI+ + +L
Sbjct: 104 LDAVMESTRRAMRATYQREMDYLESHL----SFLATVGSVSPYIGLLGTVWGIMNSFRSL 159
Query: 192 SQ----SPKILGTAIGVSLTGTLLGIILS 216
S + + I +L T +G+ +
Sbjct: 160 SSVTQATIAHVAPGIAEALIATAMGLFAA 188
>gi|261341327|ref|ZP_05969185.1| protein TolQ [Enterobacter cancerogenus ATCC 35316]
gi|288316632|gb|EFC55570.1| protein TolQ [Enterobacter cancerogenus ATCC 35316]
Length = 227
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|152969305|ref|YP_001334414.1| colicin uptake protein TolQ [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262041203|ref|ZP_06014415.1| TolQ colicin import protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329998747|ref|ZP_08303201.1| protein TolQ [Klebsiella sp. MS 92-3]
gi|150954154|gb|ABR76184.1| inner membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|259041432|gb|EEW42491.1| TolQ colicin import protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328538574|gb|EGF64678.1| protein TolQ [Klebsiella sp. MS 92-3]
Length = 227
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|330958284|gb|EGH58544.1| tolQ protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 234
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 110 VERALQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 169
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 170 APGIAEALIATAIGLFAA 187
>gi|85058861|ref|YP_454563.1| colicin uptake protein TolQ [Sodalis glossinidius str. 'morsitans']
gi|84779381|dbj|BAE74158.1| colicin import protein TolQ [Sodalis glossinidius str. 'morsitans']
Length = 228
Score = 40.3 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELEALETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIGLGTVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVMAF-NRLSLRVNKLEQNYDNFTEEFIAILHRQA 221
>gi|319404772|emb|CBI78373.1| tolQ protein [Bartonella rochalimae ATCC BAA-1498]
Length = 237
Score = 40.3 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIK 186
+ + G +++ +D+ +D+ L + + ++ +G + P IG+ G ++GI+
Sbjct: 98 KSLSKGLPTPLSLQSRIDKAMDLTLGRESVKIESRLGFLATLGSAGPFIGLFGTVVGIMN 157
Query: 187 AMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
+ ++S S I+ I +L T +G+ +
Sbjct: 158 SFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
>gi|294637424|ref|ZP_06715715.1| protein TolQ [Edwardsiella tarda ATCC 23685]
gi|291089417|gb|EFE21978.1| protein TolQ [Edwardsiella tarda ATCC 23685]
Length = 224
Score = 40.3 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLC 220
+ +G P IG+ G + GI+ A L + +++ I +L T +G+ +
Sbjct: 127 LGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAIGLFAAIPAV 186
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+++ K + Y + IA ++
Sbjct: 187 M-AYNRLNLRVNKLEQNYENFMEEFIAILHRQA 218
>gi|262375575|ref|ZP_06068808.1| TolQ [Acinetobacter lwoffii SH145]
gi|262309829|gb|EEY90959.1| TolQ [Acinetobacter lwoffii SH145]
Length = 232
Score = 40.3 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILG 199
E ++ + + A++ +G P +G+ G + GI+ A L+ +
Sbjct: 112 ERILRVGLSRDQGHLEQGLGALASIGSVAPYVGLFGTVWGIMNAFIGLADVDQVTLATVA 171
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 PGIAEALIATAIGLFAA 188
>gi|94501017|ref|ZP_01307541.1| Biopolymer transport protein [Oceanobacter sp. RED65]
gi|94426764|gb|EAT11748.1| Biopolymer transport protein [Oceanobacter sp. RED65]
Length = 231
Score = 40.3 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 53/153 (34%), Gaps = 12/153 (7%)
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD-----EEIDIILYEKLKP 161
I P N ++ R+ G I+ + L E P
Sbjct: 68 KEINQEPPAFGVENIFAAGFREFSRLRQQGGDPEAIIQGTQRAMRVATTKEAELLENHLP 127
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSY 217
+ ++ +G + P +G+ G + GI+ + L+ + ++ I +L T +G+ +
Sbjct: 128 F--LATVGSTSPYVGLFGTVWGIMNSFRGLANVQQATLAVVAPGIAEALIATAIGLFAAI 185
Query: 218 SLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++ + + Y + I+ ++
Sbjct: 186 PAVI-FYNRFTTKVDQITSHYETFAEEFISILH 217
>gi|331019301|gb|EGH99357.1| tolQ protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 212
Score = 40.3 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 88 VERSLQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 147
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 148 APGIAEALIATAIGLFAA 165
>gi|315634716|ref|ZP_07890000.1| TolQ colicin import protein [Aggregatibacter segnis ATCC 33393]
gi|315476664|gb|EFU67412.1| TolQ colicin import protein [Aggregatibacter segnis ATCC 33393]
Length = 229
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M+ EI+ I ++ + P IG+ G + GI+ A +LS + +++ I
Sbjct: 117 MNREIEDIETR----VPFLATVASISPYIGLFGTVWGIMHAFMSLSGAKQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAIGLFAA 186
>gi|325282819|ref|YP_004255360.1| MotA/TolQ/ExbB proton channel [Deinococcus proteolyticus MRP]
gi|324314628|gb|ADY25743.1| MotA/TolQ/ExbB proton channel [Deinococcus proteolyticus MRP]
Length = 231
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSP 195
E M+ + +A+ + P +G++G ++G++++ + +P
Sbjct: 86 PQAAEAAMNSALLAEDSRIYAGLNALGTAAQIAPLLGLLGTVIGMVRSFLVFSAASNPTP 145
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
LG I +L T G++++ + +++ + V++
Sbjct: 146 AELGQGISEALINTAGGLVVAILAYL-ARNALRAQADRIATAAERVRE 192
>gi|227113236|ref|ZP_03826892.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 238
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+E + ++I ++ +G + P IG+ G + GI+ A+ + S S
Sbjct: 96 PDRVERALQQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASL 155
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 156 DTVAGPIGNALIATGIGIAVA 176
>gi|222149660|ref|YP_002550617.1| protein TolQ [Agrobacterium vitis S4]
gi|221736642|gb|ACM37605.1| protein TolQ [Agrobacterium vitis S4]
Length = 239
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 112 QMRIDRSMDVTMAREAEHFEARLGSLATIGSAGPFIGLFGTVIGIMTSFQAIAGSKSTNL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLVAA 192
>gi|146276611|ref|YP_001166770.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
gi|145554852|gb|ABP69465.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 232
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ M ID ++ G + P IG+ G + GI A + + + +
Sbjct: 115 RIDRSMGVAIDKESETLNAGLSFLATTGSTAPFIGLFGTVWGIKHAFEQIAISQNTNLAV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T G++ + +++ + + Y
Sbjct: 175 VAPGIAEALLATAFGLVAAIPAVV-FYNKLNADSERIIGGYE 215
>gi|300704853|ref|YP_003746456.1| protein tolq, essential components of the tol-pal system [Ralstonia
solanacearum CFBP2957]
gi|299072517|emb|CBJ43867.1| Protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum CFBP2957]
Length = 230
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 59/202 (29%), Gaps = 28/202 (13%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY---CDVLK 80
+ L+ +++ GL + I +L + + D+
Sbjct: 11 SIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDLQA 70
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT--VLENNELTTFICDYMRMIIVGNA 138
+ N + E + + T + + + + MR
Sbjct: 71 MYQSAANNRHRTG--ALERIFEAGMREFLKTREQQRGIGDPSAILDASRRAMRAAYQREM 128
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----S 194
S E P+ ++ +G P IG+ G + GI+ A LS +
Sbjct: 129 DSL---------------ESHLPF--LASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQAT 171
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 172 LSAVAPGIAEALVATAIGLFAA 193
>gi|261415312|ref|YP_003248995.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371768|gb|ACX74513.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325673|gb|ADL24874.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 535
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N E + E + + + ++ MG P +G++G + GII +++
Sbjct: 414 NDTRENAERSLQEALLREQPKLERRMGLLAAMGTIAPLLGLLGTVTGIITLFTVITEVGT 473
Query: 194 -SPKILGTAIGVSLTGTLLGIILSYSLC---NPLTSQIKSTRLK 233
++L I +L T +G++++ + L+ +I+ +
Sbjct: 474 NDARVLAGGISEALVTTEMGLVIAIPVMILHGLLSEKIEKITSE 517
>gi|187923405|ref|YP_001895047.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187714599|gb|ACD15823.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 243
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDESVARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G +L T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAGPVGEALIMTAFGLFVA 189
>gi|94263161|ref|ZP_01286979.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93456532|gb|EAT06646.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 211
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 37/113 (32%), Gaps = 15/113 (13%)
Query: 139 RSYEIENLMDEEI---DIILYEKLKPYHAI--SHMGESLPAIGIVGAILGIIKAMGNLS- 192
+ +D I ++ + P +G++G + G+I+ L
Sbjct: 81 PPVLRRSWLDARIRRKEVSRLRHRLGNSLFLIRTLIMLCPLLGLLGTVTGMIQVFDVLGF 140
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILS---YSLCNPL---TSQIKSTRLKQHR 236
P+ + + + T+ G++++ Y L ++ + R
Sbjct: 141 SGTGDPRAMAAGVSRATIPTMAGLVVAISGYFFSINLQRSADRLARRAAESLR 193
>gi|170741559|ref|YP_001770214.1| protein TolQ [Methylobacterium sp. 4-46]
gi|168195833|gb|ACA17780.1| protein TolQ [Methylobacterium sp. 4-46]
Length = 238
Score = 40.3 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
S I+ ++D I + ++ +G + P IG+ G + GI+ A ++ + S
Sbjct: 114 SQRIDKVLDVTIQREVERFESRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSL 173
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ +
Sbjct: 174 AVVAPGIAEALFATAIGLFAA 194
>gi|319406236|emb|CBI79873.1| Biopolymer transport exbB protein [Bartonella sp. AR 15-3]
Length = 274
Score = 40.3 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 62/171 (36%), Gaps = 7/171 (4%)
Query: 52 KVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFT 111
IK +++ + AL L L +K S E + + + S+
Sbjct: 51 AFIKIVELTVAKYKARHALHLTNKAQTLAELIANFKEIKGTSVFFLEETLKEIHLSSQQP 110
Query: 112 SIPTV--LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
+ T L N+ F D + + + I +L+ + ++ +G
Sbjct: 111 RLMTSEDLHKNQGEVFSDDILSCGQIDGVKE-RIHSLLSRYLFAATRRIASGSAILATIG 169
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
P +G+ + GI+ + +++S ++ I +L T +G+ ++
Sbjct: 170 SVAPFVGLFATVWGIMNSFIGIAKSQTTRLDVVAPGIAEALLATAIGLFVA 220
>gi|237730718|ref|ZP_04561199.1| colicin uptake protein TolQ [Citrobacter sp. 30_2]
gi|226906257|gb|EEH92175.1| colicin uptake protein TolQ [Citrobacter sp. 30_2]
Length = 230
Score = 40.3 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|167648385|ref|YP_001686048.1| protein TolQ [Caulobacter sp. K31]
gi|167350815|gb|ABZ73550.1| protein TolQ [Caulobacter sp. K31]
Length = 232
Score = 40.3 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I+ ++D I + + +++ + + P IG+ G + GI+ A N+ + S
Sbjct: 113 QRIDRMLDTLIARETGKAEEGLGSLAIVATASPFIGLFGTVWGIMHAFQNIAISKNTSLA 172
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ +I +L T +G+I +
Sbjct: 173 VVAPSIAEALFATAIGLIAA 192
>gi|333021096|gb|EGK40353.1| protein TolQ [Shigella flexneri K-227]
Length = 210
Score = 40.3 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 92 MRISMNRELENL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 147
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 148 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 201
>gi|283780490|ref|YP_003371245.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283438943|gb|ADB17385.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 215
Score = 40.3 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNE----LTTFICDYMRMIIVGNARSYEIENL 146
+ + E ++ P F S + + + + R + + + ++
Sbjct: 45 EKKQEEFLASLEAPLEKKDFESAAALCDGDRRALPQLALLAISRRNLGLAKVQELVVDRF 104
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS----PKILGTAI 202
+ + + + I+++ ++ P +G++G +LG++ A G L+ P L + I
Sbjct: 105 QRDVLGDLDHR----ISWINNVIKTAPMLGLLGTVLGMMAAFGKLASEANVKPDQLASDI 160
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+L T +G+ ++ + S ++ ++ +V L
Sbjct: 161 SFALITTAIGLAIAIPATICVAS----INVRIRKMEDMVFAGL 199
>gi|253997447|ref|YP_003049511.1| protein TolQ [Methylotenera mobilis JLW8]
gi|253984126|gb|ACT48984.1| protein TolQ [Methylotenera mobilis JLW8]
Length = 224
Score = 40.3 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
RM + ++ + P+ ++ +G P IG+ G + GI+ A
Sbjct: 101 RMDVSDVMEGARRAMRAAYNREMDELDAHLPF--LASVGSVSPYIGLFGTVWGIMNAFRG 158
Query: 191 LSQSPKI----LGTAIGVSLTGTLLGIILS 216
LS + + I +L T +G+ +
Sbjct: 159 LSSVGQATLTQVAPGIAEALVATAIGLFAA 188
>gi|253686555|ref|YP_003015745.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753133|gb|ACT11209.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 238
Score = 40.3 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+E + ++I ++ +G + P IG+ G + GI+ A+ + S S
Sbjct: 96 PDRVERALQQQIQRERRTLESGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASL 155
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 156 DTVAGPIGNALIATGIGIAVA 176
>gi|168701026|ref|ZP_02733303.1| probable tolQ protein [Gemmata obscuriglobus UQM 2246]
Length = 276
Score = 40.3 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ I +K + S + P +G+VG + G+I++ L+ +P
Sbjct: 139 EDAREAAMNTLESIKSDKEMKNNYNSVIATVGPMLGLVGTVWGMIRSFSVLATATQVNPS 198
Query: 197 ILGTAIGVSLTGTLLGIILS 216
L I +L TL G+ +S
Sbjct: 199 ELAKGISHALVVTLFGVAIS 218
>gi|171682940|ref|XP_001906413.1| hypothetical protein [Podospora anserina S mat+]
gi|170941429|emb|CAP67080.1| unnamed protein product [Podospora anserina S mat+]
Length = 714
Score = 40.3 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 10/147 (6%)
Query: 19 YAMGGNPYILIQPFE--IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC 76
+ GG+P + +I AG G V+ + ++ G ++
Sbjct: 324 FLKGGSPAVFALLASPQFLIGAGVAAGITVVMF------GGWKIVKKMTGNAPPLKEQPI 377
Query: 77 DVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG 136
+ L + E E + S P V+++ + + I + R I
Sbjct: 378 AMRALPMASGAQQHQQRLQELEGQAE--QQSEASYQEPLVVDDVQELSSIEMWRRGIEPA 435
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYH 163
+ EI+++ E K
Sbjct: 436 FVEGTTVAGDDAAEIEMMSREAEKYAR 462
>gi|122042274|gb|ABM65817.1| ExbB [Mesorhizobium sp. R88B]
Length = 334
Score = 40.3 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ G+ + + + + ++ +G + P +G+ G + GI+ A +SQ
Sbjct: 198 VSGDGLKERVSSRLSRIEAAASRRMSRGTGVLATIGSTAPFVGLFGTVWGIMNAFIGISQ 257
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 258 AQTTNLAVVAPGIAEALLATAMGLVAA 284
>gi|254994809|ref|ZP_05276999.1| TOLQ protein (tolQ) [Anaplasma marginale str. Mississippi]
gi|255002937|ref|ZP_05277901.1| TOLQ protein (tolQ) [Anaplasma marginale str. Puerto Rico]
gi|255004062|ref|ZP_05278863.1| TOLQ protein (tolQ) [Anaplasma marginale str. Virginia]
Length = 221
Score = 40.3 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 82/201 (40%), Gaps = 22/201 (10%)
Query: 42 LGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI 101
LG F +N V+K + + +L F + +LK +L ++ E E
Sbjct: 18 LGAF--SNADIVVKATML-ILVAFSVISWSV-----ILKKHLVLRKRARE--IRELE--- 64
Query: 102 DDPYNSTIFTSIPTVLENN--ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKL 159
+ + FT++ ++ ++ ++ + M+ + + + + E+ L +
Sbjct: 65 ERFSSRRTFTNLTEIIGHSTGIVSQILNYGMQNSKLVTNKQAGLHRFVSAELSRTLDKLE 124
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIIL 215
++ +G S P IG+ G + G++ ++ ++ S +G + +L T LG+++
Sbjct: 125 DNVELLATIGSSSPFIGLFGTVWGVVGSLRSIPAGASVGIASVGPGMAEALFATALGLLV 184
Query: 216 ---SYSLCNPLTSQIKSTRLK 233
+ N T+ I +
Sbjct: 185 AIPANIFYNRFTALITRMSNR 205
>gi|253687640|ref|YP_003016830.1| protein TolQ [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754218|gb|ACT12294.1| protein TolQ [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 228
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + IA ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLSLRVGKLEQNYDNFTEEFIAILHRQA 221
>gi|254487877|ref|ZP_05101082.1| protein TolQ [Roseobacter sp. GAI101]
gi|214044746|gb|EEB85384.1| protein TolQ [Roseobacter sp. GAI101]
Length = 231
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----I 197
I+ MD I + K ++ G + P +G+ G + GI+ + ++ +
Sbjct: 115 RIDRSMDVAIAKESEKLQKGLPVLATTGSTAPFVGLFGTVFGIMHSFIEIAAQQNTSLVV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T +G++ + +++ + + Y
Sbjct: 175 VAPGIAEALLATGIGLLAAIPAVI-FYNKLSADSDRILGGYE 215
>gi|83312313|ref|YP_422577.1| biopolymer transport protein [Magnetospirillum magneticum AMB-1]
gi|82947154|dbj|BAE52018.1| Biopolymer transport protein [Magnetospirillum magneticum AMB-1]
Length = 241
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ +M + + + ++ +G + P IG+ G + GI+ + ++ + S
Sbjct: 121 PQRIDRVMSVTLGREMELLERRLGFLASVGSTAPFIGLFGTVWGIMNSFQSIAATKNTSL 180
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 181 AVVAPGIAEALFATALGLVAA 201
>gi|330988188|gb|EGH86291.1| tolQ protein [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 236
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 112 VERALQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|319407736|emb|CBI81383.1| tolQ protein [Bartonella sp. 1-1C]
Length = 237
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIK 186
+ + G +++ +D+ +D+ L + + ++ +G + P IG+ G ++GI+
Sbjct: 98 KSLSKGLPTPLSLQSRIDKAMDLTLGRESVKIESRLGFLATLGSAGPFIGLFGTVVGIMN 157
Query: 187 AMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
+ ++S S I+ I +L T +G+ +
Sbjct: 158 SFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
>gi|187479382|ref|YP_787407.1| TolQ protein [Bordetella avium 197N]
gi|115423969|emb|CAJ50522.1| TolQ protein [Bordetella avium 197N]
Length = 224
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKIL 198
+ E+D + + ++ G P IG++G + GI+ A + N+ Q + +
Sbjct: 114 MRAAYQREMDSLESHL----NFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASV 169
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 170 APGIAEALIATAIGLFAA 187
>gi|114706010|ref|ZP_01438913.1| MotA/TolQ/ExbB proton channel family protein [Fulvimarina pelagi
HTCC2506]
gi|114538856|gb|EAU41977.1| MotA/TolQ/ExbB proton channel family protein [Fulvimarina pelagi
HTCC2506]
Length = 241
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 144 ENLMDEEIDIILYEKLK----PYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQS 194
++E++ I E+L + + + P +G+ G +LG+I+A +
Sbjct: 97 RQTIEEDVQRIATERLHSLGSGLRLLEAIAQIAPLLGLFGTVLGMIEAFQAMQNAGSDVD 156
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
P L I V+L T +G+ ++
Sbjct: 157 PSQLAGGIWVALLTTAVGLAVA 178
>gi|319899379|ref|YP_004159476.1| tolQ protein [Bartonella clarridgeiae 73]
gi|319403347|emb|CBI76906.1| tolQ protein [Bartonella clarridgeiae 73]
Length = 238
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIK 186
+ + G+ ++ +D+ +D+ L + + ++ +G + P IG+ G ++GI+
Sbjct: 99 KSLSKGSHTPLSLQTRIDKAMDLALGRESVKIESRLGFLATLGSAGPFIGLFGTVVGIMN 158
Query: 187 AMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
+ ++S S I+ I +L T +G+ +
Sbjct: 159 SFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 192
>gi|39934424|ref|NP_946700.1| putative transport protein ExbB2 [Rhodopseudomonas palustris
CGA009]
gi|39648273|emb|CAE26793.1| putative transport protein ExbB2 [Rhodopseudomonas palustris
CGA009]
Length = 675
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI----LGTAIGVSLTGTLLGIILS 216
++ P +G++G ++G++ ++ S + + I +L T+ G+ ++
Sbjct: 568 MLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVATVAGLGVA 624
>gi|330954684|gb|EGH54944.1| tolQ protein [Pseudomonas syringae Cit 7]
Length = 236
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 112 VERSLQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|330875931|gb|EGH10080.1| tolQ protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 236
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 112 VERSLQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|309780837|ref|ZP_07675578.1| protein TolQ [Ralstonia sp. 5_7_47FAA]
gi|308920519|gb|EFP66175.1| protein TolQ [Ralstonia sp. 5_7_47FAA]
Length = 230
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYH----AISHMGESLPAIGIVGAILGIIK 186
R + G I + + ++ ++ +G P IG+ G + GI+
Sbjct: 100 RELQRGGGDPSAILDASRRAMRAAYQREMDSLEPHLPFLASVGSVSPYIGLFGTVWGIMN 159
Query: 187 AMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A LS + + I +L T +G+ +
Sbjct: 160 AFRGLSNVQQATLSAVAPGIAEALVATAIGLFAA 193
>gi|254480426|ref|ZP_05093673.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
gi|214039009|gb|EEB79669.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
Length = 196
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIIL----YEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + +Y +M E I ++ + + + + P +G++G ++G+I+
Sbjct: 61 RILAAGLSNAYHGREVMKESIQEAAQHVVHDLERYLNTLGTIAAISPLLGLLGTVVGMIR 120
Query: 187 A----MGNLSQSPKILGTAIGVSLTGTLLGIILS 216
M + + +L I +L T G+ ++
Sbjct: 121 VFAEIMSQGTGNASVLAGGISEALITTAAGLTVA 154
>gi|197120699|ref|YP_002132650.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|220915411|ref|YP_002490715.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170548|gb|ACG71521.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|219953265|gb|ACL63649.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 252
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLG 212
+ + A++ +G + P +G++G + GII A ++ + + I +L T G
Sbjct: 148 DLRRGLGALATVGSTAPFVGLLGTVAGIITAFQAMAATGSGGLGSVSAGIAEALVTTAFG 207
Query: 213 IILS 216
++++
Sbjct: 208 LLVA 211
>gi|152996213|ref|YP_001341048.1| Tol-Pal system TolQ [Marinomonas sp. MWYL1]
gi|150837137|gb|ABR71113.1| Tol-Pal system TolQ [Marinomonas sp. MWYL1]
Length = 226
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 63/187 (33%), Gaps = 26/187 (13%)
Query: 34 IVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGS 93
++I+ A + +++ + + F D+ +L L +K
Sbjct: 18 MLILLAASIFSWIVIFQRIRVLKEAKKVRTAFEESFWSG---IDLSQLYRKLTQEGRKV- 73
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
+++ + S I +N I D ++ M +
Sbjct: 74 -----EGMENIFTSGIKEFTRLRQSHNVDPEAIMDG-------------VQRAMRVALYR 115
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGT 209
+ + ++ +G + P IG+ G + GI+ + L++ + + I +L T
Sbjct: 116 EEEKLDQHLPFLATVGSTSPYIGLFGTVWGIMHSFIGLAEVQQATLATVAPGIAEALIAT 175
Query: 210 LLGIILS 216
+G+ +
Sbjct: 176 AIGLAAA 182
>gi|14041207|emb|CAC38749.1| ExbB protein [Bradyrhizobium japonicum]
Length = 258
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
IV + + ++ + + + ++ +G + P +G+ G + GI+ A +S+
Sbjct: 124 IVDDGLQERVALRLERVEAAMSRQIARGTGVLATIGATAPFVGLFGTVWGIMNAFIGISE 183
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
S ++ I +L T LG++ +
Sbjct: 184 SHTTSLAVVAPGIAEALLATALGLVAA 210
>gi|284047704|ref|YP_003398043.1| MotA/TolQ/ExbB proton channel [Acidaminococcus fermentans DSM
20731]
gi|283951925|gb|ADB46728.1| MotA/TolQ/ExbB proton channel [Acidaminococcus fermentans DSM
20731]
Length = 212
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMG 189
++ + E E+ + E ++ K + +S + P +G++G I G++ +A+G
Sbjct: 83 LLTAPPEAREKESYILGESQQLVSRFDKGLNYLSVIVTLAPILGLLGTITGMMSSFQALG 142
Query: 190 NLSQSPKILGTAIGVSLTGTLLGIILS 216
+ +P + + ++ T+ G++++
Sbjct: 143 DRWDNPLGVTAGVAEAMITTVFGLLIA 169
>gi|283833966|ref|ZP_06353707.1| protein TolQ [Citrobacter youngae ATCC 29220]
gi|291070097|gb|EFE08206.1| protein TolQ [Citrobacter youngae ATCC 29220]
Length = 227
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|114771189|ref|ZP_01448609.1| Biopolymer transport protein, TolQ [alpha proteobacterium HTCC2255]
gi|114548114|gb|EAU51001.1| Biopolymer transport protein, TolQ [alpha proteobacterium HTCC2255]
Length = 230
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD I ++ +G + P IG+ G + GI A + + +
Sbjct: 112 QQRIDRSMDVAIARESEILNNGLTFLATVGSTAPFIGLFGTVWGIKNAFEEIAIQQNTNL 171
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
++ I +L T LG++ + +++ + +
Sbjct: 172 AVVAPGIAEALVATALGLLAAIPAVI-FYNKLSADADR 208
>gi|86156696|ref|YP_463481.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773207|gb|ABC80044.1| outer membrane transport energization protein ExbB
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 252
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLG 212
+ + A++ +G + P +G++G + GII A ++ + + I +L T G
Sbjct: 148 DLRRGLGALATVGSTAPFVGLLGTVAGIITAFQAMAATGSGGLGSVSAGIAEALVTTAFG 207
Query: 213 IILS 216
++++
Sbjct: 208 LLVA 211
>gi|238756019|ref|ZP_04617343.1| hypothetical protein yruck0001_31500 [Yersinia ruckeri ATCC 29473]
gi|238705744|gb|EEP98137.1| hypothetical protein yruck0001_31500 [Yersinia ruckeri ATCC 29473]
Length = 225
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + E P+ + +G P IG+ G + GI+ A +L
Sbjct: 101 VIDGASRAMRIS--MNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFISLG 154
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + IA
Sbjct: 155 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNLHVSKLEQNYDNFMEEFIAI 213
Query: 249 MNGAI 253
++
Sbjct: 214 LHRQA 218
>gi|170694658|ref|ZP_02885810.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170140540|gb|EDT08716.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 242
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDESVARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G +L T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAGPVGEALIMTAFGLFVA 189
>gi|167625524|ref|YP_001675818.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167355546|gb|ABZ78159.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 485
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
A ++ LM +++ + I+ + P +G++G + G+I+ +L++
Sbjct: 364 EAMDQRLKQLMLKQMAQFE----RGLGFIALLAAMAPMLGLLGTVSGMIETFQSLTEFGN 419
Query: 194 -SPKILGTAIGVSLTGTLLG 212
PK+L I +L T G
Sbjct: 420 SDPKLLSEGISKALITTQAG 439
>gi|146338266|ref|YP_001203314.1| TolQ protein [Bradyrhizobium sp. ORS278]
gi|146191072|emb|CAL75077.1| TolQ protein [Bradyrhizobium sp. ORS278]
Length = 234
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 114 QMRIEKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMTSFQSIAASKNTSL 173
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 174 AVVAPGIAEALFATAIGLIAA 194
>gi|108763298|ref|YP_629705.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108467178|gb|ABF92363.1| transporter, MotA/TolQ/ExbB proton channel family [Myxococcus
xanthus DK 1622]
Length = 227
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK---- 196
+ ++ + + + ++ +G + P +G++G +GI+ A ++Q+
Sbjct: 102 ESVARALERQAQREVQSMKRGLGLLATVGSTAPFVGLLGTTMGIVNAFQLMAQAGSGGLG 161
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+ I +L T G++++
Sbjct: 162 TISAGIAEALITTAFGLLVA 181
>gi|325982807|ref|YP_004295209.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325532326|gb|ADZ27047.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 497
Score = 39.9 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
AI + P +G++G + G+I+ +++ PK+L I ++L T LG+I++
Sbjct: 384 AILVIASVAPLLGLLGTVTGMIETFDMITEFGTGDPKLLSDGISIALVTTQLGLIVA 440
>gi|223938219|ref|ZP_03630115.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223893091|gb|EEF59556.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 219
Score = 39.9 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 54/144 (37%), Gaps = 10/144 (6%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG-NARSY 141
+ + +K + E + NS + + + + +RMI G N +
Sbjct: 36 FWWLRESRKRDPQKLEQLLAALENSDVPQATKLSKGSEDPV------IRMIYRGLNHVNA 89
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---SPKIL 198
++ + I L + + + P +G++G + G+++A ++ S +
Sbjct: 90 SMQGALQLAAGIELERAGRFLTVMDTLVTLAPLLGLLGTVTGLMRAFLSIGDAELSVMAV 149
Query: 199 GTAIGVSLTGTLLGIILSYSLCNP 222
IG +L T G+ ++ P
Sbjct: 150 TGGIGEALIATACGLGIAIISLIP 173
>gi|159185874|ref|NP_356903.2| tolQ protein [Agrobacterium tumefaciens str. C58]
gi|159141008|gb|AAK89688.2| tolQ Protein [Agrobacterium tumefaciens str. C58]
Length = 239
Score = 39.9 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD I + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 112 QMRIDRAMDVTIAREGEQYEARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNL 171
Query: 196 KILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ I +L T +G+ +++Y+ ++ + + +
Sbjct: 172 AVVAPGIAEALLATAIGLVAAIPAVIAYNKFTADAHKLSARMEGFADEFSAIL 224
>gi|28870405|ref|NP_793024.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969870|ref|ZP_03398004.1| tolQ protein [Pseudomonas syringae pv. tomato T1]
gi|301386269|ref|ZP_07234687.1| tolQ protein [Pseudomonas syringae pv. tomato Max13]
gi|302063955|ref|ZP_07255496.1| tolQ protein [Pseudomonas syringae pv. tomato K40]
gi|302135263|ref|ZP_07261253.1| tolQ protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28853652|gb|AAO56719.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925418|gb|EEB58979.1| tolQ protein [Pseudomonas syringae pv. tomato T1]
Length = 236
Score = 39.9 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 112 VERSLQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|224372375|ref|YP_002606747.1| exbb\tolq family transport protein [Nautilia profundicola AmH]
gi|223589887|gb|ACM93623.1| exbb\tolq family transport protein [Nautilia profundicola AmH]
Length = 182
Score = 39.9 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--SPKILGTAIGVSLTG 208
I E + + + P IG+ G ++GI+ A ++ + ++ AI +L
Sbjct: 84 IQAARTEAESGITFLGIVASTAPFIGLFGTVIGILTAFSSMQSVTTINMIAPAIADALVA 143
Query: 209 TLLGIILS 216
T +GII++
Sbjct: 144 TAVGIIVA 151
>gi|288927599|ref|ZP_06421446.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 317 str. F0108]
gi|288330433|gb|EFC69017.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 317 str. F0108]
Length = 266
Score = 39.9 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 172 LPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS---YSLCNPLT 224
P++G +G ++G++ A + Q S ++ + V+L T+ GII++ N +
Sbjct: 179 APSLGFLGTVIGMVMAFDQIEQAGDISAPVVAAGMKVALITTIFGIIVALVLQVFYNYIL 238
Query: 225 SQIKSTRLK 233
S+I+ +
Sbjct: 239 SKIEHLVAQ 247
>gi|260597136|ref|YP_003209707.1| colicin uptake protein TolQ [Cronobacter turicensis z3032]
gi|260216313|emb|CBA29295.1| Protein tolQ [Cronobacter turicensis z3032]
Length = 231
Score = 39.9 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|237749557|ref|ZP_04580037.1| biopolymer transporter ExbB [Oxalobacter formigenes OXCC13]
gi|229380919|gb|EEO31010.1| biopolymer transporter ExbB [Oxalobacter formigenes OXCC13]
Length = 204
Score = 39.9 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---SPKILG 199
++ M+E + + + I + P +G+ G ++G+I+ G+ + +P L
Sbjct: 92 MKEAMEETGRSVALQMERFLTTIGTIATLAPLMGLFGTVVGMIEIFGSQNAGGANPAELA 151
Query: 200 TAIGVSLTGTLLGIILS 216
I V+L T G++++
Sbjct: 152 HGISVALYNTGFGLLIA 168
>gi|56416595|ref|YP_153669.1| TolQ protein [Anaplasma marginale str. St. Maries]
gi|222474962|ref|YP_002563377.1| TOLQ protein (tolQ) [Anaplasma marginale str. Florida]
gi|56387827|gb|AAV86414.1| TolQ protein [Anaplasma marginale str. St. Maries]
gi|222419098|gb|ACM49121.1| TOLQ protein (tolQ) [Anaplasma marginale str. Florida]
Length = 230
Score = 39.9 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 82/201 (40%), Gaps = 22/201 (10%)
Query: 42 LGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI 101
LG F +N V+K + + +L F + +LK +L ++ E E
Sbjct: 27 LGAF--SNADIVVKATML-ILVAFSVISWSV-----ILKKHLVLRKRARE--IRELE--- 73
Query: 102 DDPYNSTIFTSIPTVLENN--ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKL 159
+ + FT++ ++ ++ ++ + M+ + + + + E+ L +
Sbjct: 74 ERFSSRRTFTNLTEIIGHSTGIVSQILNYGMQNSKLVTNKQAGLHRFVSAELSRTLDKLE 133
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIIL 215
++ +G S P IG+ G + G++ ++ ++ S +G + +L T LG+++
Sbjct: 134 DNVELLATIGSSSPFIGLFGTVWGVVGSLRSIPAGASVGIASVGPGMAEALFATALGLLV 193
Query: 216 ---SYSLCNPLTSQIKSTRLK 233
+ N T+ I +
Sbjct: 194 AIPANIFYNRFTALITRMSNR 214
>gi|85714503|ref|ZP_01045491.1| exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
[Nitrobacter sp. Nb-311A]
gi|85698950|gb|EAQ36819.1| exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
[Nitrobacter sp. Nb-311A]
Length = 296
Score = 39.9 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 65/182 (35%), Gaps = 15/182 (8%)
Query: 42 LGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI 101
+G F+ A+ + G++L + + T + +L +
Sbjct: 74 IGMFMAADAIVKAVMIGLALASVVTWSVWLAKTIELLGARSRLLRDLHSVEDVRSLD--- 130
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMR--MIIVGNARSYEIENLMDEEIDIILYEKL 159
S I + + LT D + + + E + I+ ++
Sbjct: 131 ---EASKILQR--SNSDIAILTNAARDEIHRSQDAMNHDGVKERVASLFSRIEAAAARRM 185
Query: 160 -KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
+ ++ +G + P +G+ G + GI+ A +S+ + ++ I +L T +G++
Sbjct: 186 TRGTSILATIGSTAPFVGLFGTVWGIMNAFIGISKTQTTNLAVVAPGIAEALLATAMGLV 245
Query: 215 LS 216
+
Sbjct: 246 AA 247
>gi|300715886|ref|YP_003740689.1| TolQ colicin import protein [Erwinia billingiae Eb661]
gi|299061722|emb|CAX58838.1| TolQ colicin import protein [Erwinia billingiae Eb661]
Length = 225
Score = 39.9 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 9/136 (6%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH----AISHMGESLPAIGIVGAI 181
++ R+ N + + I L +++ + +G P IG+ G +
Sbjct: 84 FKEFARLHRANNHAPEAVVEGATRAMRISLNREMEALENHIPFLGTVGSISPYIGLFGTV 143
Query: 182 LGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
GI+ A L + +++ I +L T +G+ + +++ K +
Sbjct: 144 WGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQN 202
Query: 238 YIIVKKALIAYMNGAI 253
Y + A ++
Sbjct: 203 YDNFMEEFTAILHRQA 218
>gi|296160455|ref|ZP_06843271.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295889204|gb|EFG69006.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 236
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 51/146 (34%), Gaps = 12/146 (8%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFI--------CDYMRMII 134
++ K+ + P S ++ T D ++
Sbjct: 40 SWILTRAKRQATRAIAQFWQAPTLSEGVAALRRTDRERVFTPLAEAALHAAEVDIPGALL 99
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
R + + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 100 ARVERGERVLRALRQALSASQRRLEFGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAAS 159
Query: 195 ----PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 160 GQAQIENVAGPVGEALIMTAFGLVVA 185
>gi|240851222|ref|YP_002972625.1| inner membrane TolQ protein [Bartonella grahamii as4aup]
gi|240268345|gb|ACS51933.1| inner membrane TolQ protein [Bartonella grahamii as4aup]
Length = 237
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
I+ MD + + ++ +G + P IG+ G ++GI+++ ++S S I
Sbjct: 113 RIDKAMDLTLGRESEKIESKLSFLATLGSAGPFIGLFGTVIGIMESFLSISASQNTSLAI 172
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 173 VAPGIAEALLATAIGLFAA 191
>gi|332716446|ref|YP_004443912.1| biopolymer transport protein tolQ [Agrobacterium sp. H13-3]
gi|325063131|gb|ADY66821.1| biopolymer transport protein tolQ [Agrobacterium sp. H13-3]
Length = 239
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD I + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 112 QMRIDRAMDVTIAREGEQYEARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNL 171
Query: 196 KILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ I +L T +G+ +++Y+ ++ + + +
Sbjct: 172 AVVAPGIAEALLATAIGLVAAIPAVIAYNKFTADAHKLSARMEGFADEFSAIL 224
>gi|91215089|ref|ZP_01252061.1| MotA/TolQ/ExbB proton channel family protein [Psychroflexus torquis
ATCC 700755]
gi|91186694|gb|EAS73065.1| MotA/TolQ/ExbB proton channel family protein [Psychroflexus torquis
ATCC 700755]
Length = 262
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
+ K +S P +G +G ++G+I+A + P ++ I V+L T+ G
Sbjct: 161 QLEKNVSWVSLFIALAPMLGFMGTVIGMIQAFDKIEAAGDMQPSLVAGGIKVALLTTVFG 220
Query: 213 IILS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
++++ N + ++I S I + L+A+ N
Sbjct: 221 LVVAIILQVFYNYIIAKIDSIVNDMEDASITLIDILVAHKN 261
>gi|74317528|ref|YP_315268.1| exbB-like biopolymer transport [Thiobacillus denitrificans ATCC
25259]
gi|74057023|gb|AAZ97463.1| probable exbB-like biopolymer transport [Thiobacillus denitrificans
ATCC 25259]
Length = 201
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R+ + +M E I+ + ++ + ++ + P +G++G ++G+I+
Sbjct: 72 RIFATALRNANNSREIMKESIEEAGRAVTHDLDRFLTSLGTIASMAPLLGLLGTVIGMIE 131
Query: 187 AMGNLSQ---SPKILGTAIGVSLTGTLLGIILS 216
G + +P L I ++L T G+I++
Sbjct: 132 IFGAQTGGAANPGQLAHGISIALYNTAFGLIVA 164
>gi|13473530|ref|NP_105098.1| exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
[Mesorhizobium loti MAFF303099]
gi|14024280|dbj|BAB50884.1| ExbB [Mesorhizobium loti MAFF303099]
Length = 249
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ G+ + + + + ++ +G + P +G+ G + GI+ A +SQ
Sbjct: 113 VGGDGLKERVTSRLSRIEAAASRRMSRGTGVLATIGSTAPFVGLFGTVWGIMNAFIGISQ 172
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 173 AQTTNLAVVAPGIAEALLATAMGLVAA 199
>gi|291618145|ref|YP_003520887.1| ExbB [Pantoea ananatis LMG 20103]
gi|291153175|gb|ADD77759.1| ExbB [Pantoea ananatis LMG 20103]
gi|327394543|dbj|BAK11965.1| biopolymer transport ExbB protein [Pantoea ananatis AJ13355]
Length = 250
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS--QSPKILGTA--I 202
+ ID ++ +G + P +G++G + GI A+ ++S P + A +
Sbjct: 112 LKNSIDDSAANLQSGLGILASIGSTAPFVGLLGTVWGIYHALQSISMADQPDLAHVAGPV 171
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
G +L T G+ ++ + + R QH +
Sbjct: 172 GEALIMTAFGLFVAIPAVLGFNTISRRNRALQHAI 206
>gi|239832740|ref|ZP_04681069.1| tonB-system energizer ExbB [Ochrobactrum intermedium LMG 3301]
gi|239825007|gb|EEQ96575.1| tonB-system energizer ExbB [Ochrobactrum intermedium LMG 3301]
Length = 338
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+SQ
Sbjct: 202 GEGLKERVSSRLSRIEAKAGRRLSKGTGVLATIGSVAPFVGLFGTVWGIMNSFINISQAQ 261
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 262 TTNLAVVAPGIAEALLATAIGLVAA 286
>gi|254465478|ref|ZP_05078889.1| protein TolQ [Rhodobacterales bacterium Y4I]
gi|206686386|gb|EDZ46868.1| protein TolQ [Rhodobacterales bacterium Y4I]
Length = 231
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
I+ MD I ++ +G + P +G+ G + GI+ A +++ + +
Sbjct: 115 RIDRSMDVAIAKETEGLQSGLSVLATVGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T LG++ + +++ + + Y
Sbjct: 175 VAPGIAEALMATGLGLLAAIPAVV-FYNKLSADSDRIIGGYE 215
>gi|146309076|ref|YP_001189541.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145577277|gb|ABP86809.1| Cell division and transport-associated protein TolQ [Pseudomonas
mendocina ymp]
Length = 236
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I K ++ +G P +G+ G + GI+ + LSQ + +
Sbjct: 112 VERSLLVAIAEQEERLEKGLPLLATVGSVSPYVGLFGTVWGIMNSFIGLSQVQQATLSTV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|32472814|ref|NP_865808.1| tolQ protein [Rhodopirellula baltica SH 1]
gi|32444051|emb|CAD73493.1| probable tolQ protein [Rhodopirellula baltica SH 1]
Length = 257
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII-----KAMGNLSQSPKILGTAIGV 204
E + + E Y A+ +G P IG+ G + G+I A+G + P L I
Sbjct: 145 EEESMKLEHRLSYMAL--IGNLSPMIGLFGTVQGMISSFQVIALGGSTPKPSDLAAGIST 202
Query: 205 SLTGTLLGIILS 216
+L TL+G+ ++
Sbjct: 203 ALFTTLVGLAVA 214
>gi|227327599|ref|ZP_03831623.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 146
Score = 39.9 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+E + ++I ++ +G + P IG+ G + GI+ A+ + S S
Sbjct: 4 PDRVERALQQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASL 63
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 64 DTVAGPIGNALIATGIGIAVA 84
>gi|260911537|ref|ZP_05918123.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 472 str. F0295]
gi|260634327|gb|EEX52431.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 472 str. F0295]
Length = 328
Score = 39.9 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q S ++ + V+L T+ GII
Sbjct: 228 EKGCSWITLFIVMAPSLGFLGTVIGMVMAFDQIEQAGDISAPVVAAGMKVALITTIFGII 287
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I+ +
Sbjct: 288 VALVLQVFYNYILSKIEHLVAQ 309
>gi|322419085|ref|YP_004198308.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
gi|320125472|gb|ADW13032.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
Length = 598
Score = 39.9 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 13/79 (16%)
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLGI------ILSYSLC 220
P G++G + G++ +L+++ + + + +L TL G+ + +YS
Sbjct: 509 GGPFWGLLGTVWGVMNTFASLAEAGEANLSAIAPGVASALACTLFGLLVAIPALFAYSF- 567
Query: 221 NPLTSQIKSTRLKQHRLYI 239
L QIK + H
Sbjct: 568 --LGVQIKHLNNETHHFIE 584
>gi|253687542|ref|YP_003016732.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754120|gb|ACT12196.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 246
Score = 39.9 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
+ +D + ++ +G + P IG++G + GI A+ +S + +
Sbjct: 112 LSNTLDTNSGKLQSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPV 171
Query: 203 GVSLTGTLLGIILS 216
G +L T G+ ++
Sbjct: 172 GEALIMTAFGLFVA 185
>gi|226329175|ref|ZP_03804693.1| hypothetical protein PROPEN_03078 [Proteus penneri ATCC 35198]
gi|225202361|gb|EEG84715.1| hypothetical protein PROPEN_03078 [Proteus penneri ATCC 35198]
Length = 196
Score = 39.9 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPK 196
+E M+ + I+ E + ++ +G P IG+ G + GI+ + + + +
Sbjct: 73 ERVEMRMERRVAAIIRELGRGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLA 132
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 133 VVAPGIAEALLATAIGLIAA 152
>gi|74316929|ref|YP_314669.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
gi|74056424|gb|AAZ96864.1| MotA/TolQ/ExbB proton channel family [Thiobacillus denitrificans
ATCC 25259]
Length = 253
Score = 39.9 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPK 196
+ L+ ID + ++ G + P IG+ G + GI A+ N+ +
Sbjct: 109 EFLTRLLRNGIDQEAMRAERGLTVMASAGSAAPYIGLFGTVWGIYHALVNIGLAGQGTLD 168
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+ +G +L T LG+ ++
Sbjct: 169 KVSGPVGEALIMTALGLAVA 188
>gi|327539930|gb|EGF26531.1| TolQ-type transport protein [Rhodopirellula baltica WH47]
Length = 281
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII-----KAMGNLSQSPKILGTAIGV 204
E + + E Y A+ +G P IG+ G + G+I A+G + P L I
Sbjct: 169 EEESMKLEHRLSYMAL--IGNLSPMIGLFGTVQGMISSFQVIALGGSTPKPSDLAAGIST 226
Query: 205 SLTGTLLGIILS 216
+L TL+G+ ++
Sbjct: 227 ALFTTLVGLAVA 238
>gi|319781024|ref|YP_004140500.1| protein TolQ [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166912|gb|ADV10450.1| protein TolQ [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 236
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
I+ MD + + + ++ G + P IG+ G ++GI+ + ++ S +
Sbjct: 114 RIDKAMDLALTREMEKLEGRLGFLATTGSAAPFIGLFGTVIGIMTSFQAIAGSKNTSLAV 173
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 174 VAPGIAEALLATAIGLLAA 192
>gi|300023933|ref|YP_003756544.1| protein TolQ [Hyphomicrobium denitrificans ATCC 51888]
gi|299525754|gb|ADJ24223.1| protein TolQ [Hyphomicrobium denitrificans ATCC 51888]
Length = 238
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E +MD I + + ++ +G + P +G+ G + GI+ + ++ + S +
Sbjct: 120 RVEKVMDVTISREMERLDRRLLFLATVGSTAPFVGLFGTVWGIMTSFQSIAVSKNTSLAV 179
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T LG++ +
Sbjct: 180 VAPGIAEALFATALGLMAA 198
>gi|148559259|ref|YP_001259522.1| ExbB protein [Brucella ovis ATCC 25840]
gi|148370516|gb|ABQ60495.1| ExbB [Brucella ovis ATCC 25840]
Length = 310
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 171 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 230
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 231 TTNLAVVAPGIAEALLATAIGLVAA 255
>gi|92118975|ref|YP_578704.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91801869|gb|ABE64244.1| Cell division and transport-associated protein TolQ [Nitrobacter
hamburgensis X14]
Length = 237
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 117 QMRIEKVMNVSIAREIERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 176
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 177 AVVAPGIAEALFATAVGLIAA 197
>gi|114562404|ref|YP_749917.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
gi|114333697|gb|ABI71079.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 217
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-S 192
I +R ++E M+E + + K I+ + +G++G I+G+I A + S
Sbjct: 87 ISSASRREDVEYAMEETVMEYMLRLEKRTPFIATLANIATLLGLLGTIMGLIAAFSAVAS 146
Query: 193 QSPKI----LGTAIGVSLTGTLLGIILSYSLCN 221
P L ++I V++ T G+I + L
Sbjct: 147 ADPAEKANLLSSSISVAMNTTAFGLITAIPLIL 179
>gi|319780847|ref|YP_004140323.1| tonB-system energizer ExbB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166735|gb|ADV10273.1| tonB-system energizer ExbB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 323
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ G+ + + + + ++ +G + P +G+ G + GI+ A +SQ
Sbjct: 187 VSGDGLKERVTSRLSRIEAAAARRMSRGTGVLATIGSTAPFVGLFGTVWGIMNAFIGISQ 246
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 247 AQTTNLAVVAPGIAEALLATAMGLVAA 273
>gi|303257948|ref|ZP_07343957.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
gi|302859291|gb|EFL82373.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
Length = 213
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 145 NLMDEEIDIILYEKLKPYH----AISHMGESLPAIGIVGAILGIIKAM----GNLSQSPK 196
+ + E+ + ++ KP + + + P +G++G ++G++ N+S P
Sbjct: 84 DDIRAEVAYLFHKHFKPVNNALTWLKLISAVSPLLGLLGTVVGMVTVFRTISENVSPDPT 143
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L I +L T++G++++
Sbjct: 144 MLAGGIWTALITTVMGLVVA 163
>gi|237744147|ref|ZP_04574628.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|256027740|ref|ZP_05441574.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|289765697|ref|ZP_06525075.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|229431376|gb|EEO41588.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|289717252|gb|EFD81264.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
Length = 202
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
I + ++ + +E + ++ + P +G++G + G+I+A N+S
Sbjct: 86 IDVQDYEFILKEITIKETSPYESRL----NLLASVISISPMLGLLGTVTGMIRAFTNISK 141
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILSYSLC 220
I+ I +L T G++++ +
Sbjct: 142 YGTGDAAIVADGIAEALLTTAAGLMIAIPVI 172
>gi|119478441|ref|ZP_01618426.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
gi|119448527|gb|EAW29774.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
Length = 208
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIIL----YEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + S ++M E I ++ + + + + P +G++G ++G+IK
Sbjct: 72 RILAAGLSNSRHGRDVMKESIQEAASHVIHDLERYLNTLGTIAAISPLLGLLGTVIGMIK 131
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + + +L I +L T G+ ++
Sbjct: 132 VFTAIMLQGTGNAGVLAGGISEALITTATGLTVA 165
>gi|189461915|ref|ZP_03010700.1| hypothetical protein BACCOP_02582 [Bacteroides coprocola DSM 17136]
gi|189431309|gb|EDV00294.1| hypothetical protein BACCOP_02582 [Bacteroides coprocola DSM 17136]
Length = 267
Score = 39.9 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A N+ SP ++ + V+L T+ G+I
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDNIQRAGDISPTVVAGGMKVALITTIFGLI 224
Query: 215 LS 216
++
Sbjct: 225 VA 226
>gi|312970816|ref|ZP_07784995.1| protein TolQ [Escherichia coli 1827-70]
gi|310336577|gb|EFQ01744.1| protein TolQ [Escherichia coli 1827-70]
gi|313649620|gb|EFS14044.1| protein TolQ [Shigella flexneri 2a str. 2457T]
gi|315614613|gb|EFU95255.1| protein TolQ [Escherichia coli 3431]
gi|320172960|gb|EFW48188.1| MotA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
CDC 74-1112]
gi|320179422|gb|EFW54379.1| MotA/TolQ/ExbB proton channel family protein [Shigella boydii ATCC
9905]
gi|320183979|gb|EFW58803.1| MotA/TolQ/ExbB proton channel family protein [Shigella flexneri CDC
796-83]
gi|320198143|gb|EFW72747.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
EC4100B]
gi|323158789|gb|EFZ44802.1| protein TolQ [Escherichia coli E128010]
gi|323180023|gb|EFZ65579.1| protein TolQ [Escherichia coli 1180]
gi|323185102|gb|EFZ70468.1| protein TolQ [Escherichia coli 1357]
gi|323191082|gb|EFZ76347.1| protein TolQ [Escherichia coli RN587/1]
gi|332093798|gb|EGI98852.1| protein TolQ [Shigella boydii 5216-82]
gi|332760895|gb|EGJ91183.1| protein TolQ [Shigella flexneri 4343-70]
gi|332761220|gb|EGJ91506.1| protein TolQ [Shigella flexneri 2747-71]
gi|333007852|gb|EGK27328.1| protein TolQ [Shigella flexneri K-218]
gi|333010144|gb|EGK29579.1| protein TolQ [Shigella flexneri K-272]
gi|333021416|gb|EGK40666.1| protein TolQ [Shigella flexneri K-304]
Length = 210
Score = 39.9 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 92 MRISMNRELENL--ETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 147
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 148 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 201
>gi|261855151|ref|YP_003262434.1| protein TolQ [Halothiobacillus neapolitanus c2]
gi|261835620|gb|ACX95387.1| protein TolQ [Halothiobacillus neapolitanus c2]
Length = 225
Score = 39.9 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E M + + + + ++ +G P +G+ G + GI+ A NL + +
Sbjct: 109 VERAMRVTLHRQIDKFEEGLSVLATIGSVSPYVGLFGTVWGIMSAFMNLGNAQNATLATV 168
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 169 APPIAEALIATAMGLFAA 186
>gi|108755183|emb|CAK32575.1| putative biopolymer transport protein [uncultured organism]
Length = 152
Score = 39.9 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
IE +M L + ++ G + P IG+ G + GI+ + ++ + S
Sbjct: 32 QERIERVMQIATVRELDRAERNMTFLASTGATAPFIGLFGTVWGIMNSFQSIALSKNTSL 91
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 92 VVVAPGIAEALFATALGLLAA 112
>gi|77464243|ref|YP_353747.1| biopolymer transport protein, TolQ [Rhodobacter sphaeroides 2.4.1]
gi|126463085|ref|YP_001044199.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|221640127|ref|YP_002526389.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides KD131]
gi|332559132|ref|ZP_08413454.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides WS8N]
gi|77388661|gb|ABA79846.1| Biopolymer transport protein, TolQ [Rhodobacter sphaeroides 2.4.1]
gi|126104749|gb|ABN77427.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|221160908|gb|ACM01888.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides KD131]
gi|332276844|gb|EGJ22159.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides WS8N]
Length = 232
Score = 39.9 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ M ID ++ G + P IG+ G + GI A + + + +
Sbjct: 115 RIDRSMGVAIDKESETLNSGLSFLATTGSTAPFIGLFGTVWGIKHAFEQIAISQNTNLAV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+ I +L T G++ + +++ + +
Sbjct: 175 VAPGIAEALLATAFGLVAAIPAVV-FYNKLNADSER 209
>gi|238897407|ref|YP_002923084.1| inner membrane protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465161|gb|ACQ66935.1| inner membrane protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 236
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ + L + +++
Sbjct: 109 MRISMNRELEAL--ETHVPF--LGTIGSISPYIGLFGTVWGIMHSFIALGAAKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
I +L T +G+ + ++ K + Y + IA ++
Sbjct: 165 APGIAEALIATAIGLFSAIPAVM-AYNRFNQNINKIEQNYDNFVEEFIAILHRE 217
>gi|218961294|ref|YP_001741069.1| MotA/TolQ/ExbB proton channel family protein (fragment) [Candidatus
Cloacamonas acidaminovorans]
gi|167729951|emb|CAO80863.1| MotA/TolQ/ExbB proton channel family protein (fragment) [Candidatus
Cloacamonas acidaminovorans]
Length = 145
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL------SQSPK 196
I M+ ++ L+ K +S P IG +G ++G++ +
Sbjct: 26 INQSMEATANLELHRLEKGLGWLSTFAAIAPLIGFLGTVIGMVNVFMKIQAASQSGVDIS 85
Query: 197 ILGTAIGVSLTGTLLGIILS---YSLCNPLTSQIKSTRL--KQHRLYIIVK 242
+L I V+L T+ G+I+ N L ++++ +++ + I+K
Sbjct: 86 MLAGGIWVALLTTVGGLIVGIATIIFYNDLVQKLENIVKDMQENAVEYIIK 136
>gi|153873820|ref|ZP_02002274.1| MotA/TolQ/ExbB proton channel [Beggiatoa sp. PS]
gi|152069718|gb|EDN67730.1| MotA/TolQ/ExbB proton channel [Beggiatoa sp. PS]
Length = 236
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQSP--KILGTA 201
M + + E ++ +G P IG+ G + GI+ A+G + Q ++
Sbjct: 114 MRVALHREMDELDANLATLATVGSVSPYIGLFGTVWGIMNSFHALGTMEQQVTLAMVAPG 173
Query: 202 IGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 174 ISEALIATAMGLFAA 188
>gi|322833834|ref|YP_004213861.1| protein TolQ [Rahnella sp. Y9602]
gi|321169035|gb|ADW74734.1| protein TolQ [Rahnella sp. Y9602]
Length = 229
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 64/168 (38%), Gaps = 18/168 (10%)
Query: 90 KKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDE 149
+ R ET + + ++S N+ +I G++R+ I
Sbjct: 68 ESQGRRETLSGAEQIFHSGFKEFARLHRANSHAPE-------AVIEGSSRAMRI----SF 116
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVS 205
++ E P+ + +G P IG+ G + GI+ A +G++ Q + +++ I +
Sbjct: 117 NRELESLETHIPF--LGTVGSISPYIGLFGTVWGIMHAFIGLGSVKQATLQMVAPGIAEA 174
Query: 206 LTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
L T +G+ + +++ K + Y + A ++
Sbjct: 175 LIATAIGLFAAIPAVM-AYNRLNQRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|227114381|ref|ZP_03828037.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 246
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
+ +D + ++ +G + P IG++G + GI A+ +S + +
Sbjct: 112 LSNTLDTNSGKLQSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPV 171
Query: 203 GVSLTGTLLGIILS 216
G +L T G+ ++
Sbjct: 172 GEALIMTAFGLFVA 185
>gi|225873732|ref|YP_002755191.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
gi|225791727|gb|ACO31817.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
Length = 247
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 138 ARSYEIEN---LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
+IE+ ++ I+ + + A++ +G + P +G+ G + GI+KA ++
Sbjct: 124 VTPEQIESSKRALERAEAIVHAKLKRGLGALATIGSTAPFVGLFGTVAGILKAFNEIATM 183
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ I +L T G++++
Sbjct: 184 KTPGIGAVAGGISEALVTTAFGLLVA 209
>gi|71735527|ref|YP_275169.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556080|gb|AAZ35291.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320323664|gb|EFW79748.1| tolQ protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320328302|gb|EFW84306.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330878529|gb|EGH12678.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330889788|gb|EGH22449.1| tolQ protein [Pseudomonas syringae pv. mori str. 301020]
Length = 236
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 112 VERALQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|27382184|ref|NP_773713.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
gi|27355354|dbj|BAC52338.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
Length = 261
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
IV + + ++ + + + ++ +G + P +G+ G + GI+ A +S+
Sbjct: 127 IVDDGLQERVALRLERVEAAMSRQIARGTGVLATIGATAPFVGLFGTVWGIMNAFIGISE 186
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
S ++ I +L T LG++ +
Sbjct: 187 SHTTSLAVVAPGIAEALLATALGLVAA 213
>gi|322437192|ref|YP_004219404.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321164919|gb|ADW70624.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 248
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
+ A+ + ++ I+ + + ++ +G + P IG++G ++GI+ A +
Sbjct: 124 AISEAQIESSKRALERSEAIVHSKLKRGLGGLATIGSTAPFIGLLGTVIGILNAFQQIAT 183
Query: 192 --SQSPKILGTAIGVSLTGTLLGIILS 216
+ + I +L T G++++
Sbjct: 184 QKTSGIGAVAGGISEALVTTAFGLVVA 210
>gi|291612987|ref|YP_003523144.1| protein TolQ [Sideroxydans lithotrophicus ES-1]
gi|291583099|gb|ADE10757.1| protein TolQ [Sideroxydans lithotrophicus ES-1]
Length = 225
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
M + + ++ +G P +G++G + GI+ A LS + +
Sbjct: 113 RRAMRAKYQREMDHLESHLSFLATVGSVSPYVGLLGTVWGIMNAFRGLSNVGQATLAQVA 172
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 173 PGIAEALVATAMGLFAA 189
>gi|227328309|ref|ZP_03832333.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 246
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
+ +D + ++ +G + P IG++G + GI A+ +S + +
Sbjct: 112 LSNTLDTNSGKLQSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPV 171
Query: 203 GVSLTGTLLGIILS 216
G +L T G+ ++
Sbjct: 172 GEALIMTAFGLFVA 185
>gi|114331497|ref|YP_747719.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
gi|114308511|gb|ABI59754.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
Length = 202
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQ 193
++ +++ ++E + +E + + + P +G+ G ++G+I+ G+
Sbjct: 82 DSPREIMKDSIEEAGRVAAHELERYLTTLGTIASLSPLMGLFGTLIGMIEIFGSGTPSGS 141
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+P L I V+L + GI+++
Sbjct: 142 NPVQLAHGISVALYNSAFGILVA 164
>gi|90412126|ref|ZP_01220132.1| Putative TolQ protein [Photobacterium profundum 3TCK]
gi|90326850|gb|EAS43235.1| Putative TolQ protein [Photobacterium profundum 3TCK]
Length = 228
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLC 220
++ +G P IG+ G + GI+ A L + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGLFAAIPAV 190
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+++ + K Y + + ++
Sbjct: 191 M-FYNKLTNQVSKLEHTYATFMEEFSSILHRQA 222
>gi|328952950|ref|YP_004370284.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328453274|gb|AEB09103.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 231
Score = 39.9 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVSLTGTLLGIILSYSL 219
+ +G + P IG+ G +LGII A +L P ++ I +L T +G++++
Sbjct: 117 LGTLGANAPFIGLFGTVLGIIHAFKDLALAEGGGGPAVMA-GIAEALIATAVGLLVAIPA 175
Query: 220 CNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ + ++++ L+A+++GA
Sbjct: 176 VV-MYNLFHHRLQVVLERSRVLEQLLLAHLDGA 207
>gi|126732839|ref|ZP_01748632.1| MotA/TolQ/ExbB proton channel [Sagittula stellata E-37]
gi|126706678|gb|EBA05751.1| MotA/TolQ/ExbB proton channel [Sagittula stellata E-37]
Length = 213
Score = 39.9 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 59/159 (37%), Gaps = 7/159 (4%)
Query: 92 GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEI 151
G R E +D+ + ++ + + I + + + +
Sbjct: 44 GRRKRAEEILDNWLSGRADLALQQAQKRKSVLARILQAVFSGVQAKPGDSTYAEELGRQT 103
Query: 152 DIILYEKLKPY-HAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVS 205
II + + + ++ P +G++G ++G+I A L + P IL I +
Sbjct: 104 AIIELATMTDRMRTLEMVVQAAPMLGLLGTVIGMIDAFSALAVAEGAVDPTILAAGIYTA 163
Query: 206 LTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
LT T G+ ++ + + + +S ++ + V A
Sbjct: 164 LTTTAAGLAIA-LVAYFVANYFESRIERERNMIETVISA 201
>gi|54309714|ref|YP_130734.1| putative TolQ protein [Photobacterium profundum SS9]
gi|46914152|emb|CAG20932.1| Putative TolQ protein [Photobacterium profundum SS9]
Length = 228
Score = 39.9 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLC 220
++ +G P IG+ G + GI+ A L + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGLFAAIPAV 190
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+++ + K Y + + ++
Sbjct: 191 M-FYNKLTNQVSKLEHTYATFMEEFSSILHRQA 222
>gi|331000080|ref|ZP_08323775.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
gi|329572964|gb|EGG54584.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
Length = 213
Score = 39.9 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 145 NLMDEEIDIILYEKLKPYH----AISHMGESLPAIGIVGAILGIIKAM----GNLSQSPK 196
+ + E+ + ++ KP + + + P +G++G ++G++ N+S P
Sbjct: 84 DDIRAEVAYLFHKHFKPVNNALTWLKLISAVSPLLGLLGTVIGMVTVFRTISENVSPDPT 143
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L I +L T++G++++
Sbjct: 144 MLAGGIWTALITTVMGLVVA 163
>gi|325107035|ref|YP_004268103.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324967303|gb|ADY58081.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 285
Score = 39.9 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGV 204
E + + YE Y A+ + P IG++G + G+I + ++ + P L I
Sbjct: 174 EEENMNYEHRLSYLAL--ISSIAPMIGLMGTVYGMILSFQKIATATVAPKPSELADGIST 231
Query: 205 SLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+L TL G+ ++ S +++ + +V + L+
Sbjct: 232 ALFTTLEGLAVAIPAMI-AYSLLRNRVARYMLEVGMVSEGLMG 273
>gi|39995139|ref|NP_951090.1| tolQ protein [Geobacter sulfurreducens PCA]
gi|39981901|gb|AAR33363.1| tolQ protein [Geobacter sulfurreducens PCA]
gi|298504169|gb|ADI82892.1| TolQ-related biopolymer transport membrane proton channel
[Geobacter sulfurreducens KN400]
Length = 225
Score = 39.9 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KIL 198
I + + K ++ G + P IG+ G + GI+ A + ++ ++
Sbjct: 109 IARALRRATTSEITRLEKYVTFLATTGSTAPFIGLFGTVWGIMNAFKGIGETGSASLAVV 168
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G++ +
Sbjct: 169 APGIAEALIATAIGLVAA 186
>gi|332666532|ref|YP_004449320.1| hypothetical protein Halhy_4610 [Haliscomenobacter hydrossis DSM
1100]
gi|332335346|gb|AEE52447.1| hypothetical protein Halhy_4610 [Haliscomenobacter hydrossis DSM
1100]
Length = 262
Score = 39.9 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 93/263 (35%), Gaps = 43/263 (16%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPY--ILIQPFEIVIVAGAGLGGFVMANPLKVIKD-- 56
+S + GL IL I + LI V+V G + P +I+
Sbjct: 11 LSIVGGLVFWILAIAIASITDDPDLAEPTLINRL-FVMVGG--------SFPSGIIQAVT 61
Query: 57 SGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFT----S 112
L + +D + + K E I DP
Sbjct: 62 MMFFLYGLITLLMHRKDIIQE--------QTSFKLNLLPTGEQKILDPKQVNEIKLKMIE 113
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
+ ++ +L + I + S ++ ++D +++ + + Y + ++ + +
Sbjct: 114 LEQQGQSYQLISLIKKACTQYRNEGSISDTLQ-VIDHQVEAMQEQSQSNYDILHYLAQGI 172
Query: 173 PAIGIVGAILGIIKAMG---------NLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
P++G +G +LGI A+G L Q +L A + LG+IL+Y
Sbjct: 173 PSLGFLGTVLGISGAIGKFYLATDFSKLPQITSMLNIAFDTTFFSLFLGLILTYVF---- 228
Query: 224 TSQIKSTRLKQHRLYIIVKKALI 246
T+ +++ Y +++ +I
Sbjct: 229 ----NRTQDNENKFYTRMREYVI 247
>gi|152981657|ref|YP_001354583.1| MotA/TolQ/ExbB proton channel family protein [Janthinobacterium sp.
Marseille]
gi|151281734|gb|ABR90144.1| MotA/TolQ/ExbB proton channel family protein [Janthinobacterium sp.
Marseille]
Length = 230
Score = 39.9 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
I + +EI+ + ++ +G + P IG+ G + GI A+ +S S
Sbjct: 106 NTDPGELITRTLRQEINRVSSRLETGLTLLASVGSTAPFIGLFGTVWGIYHALVAVSSSG 165
Query: 195 ---PKILGTAIGVSLTGTLLGIILS 216
+ +G +L T LG+ ++
Sbjct: 166 TIQIDKVAGPVGEALIMTALGLAVA 190
>gi|33598299|ref|NP_885942.1| putative TolQ-like translocation protein [Bordetella parapertussis
12822]
gi|33566857|emb|CAE39072.1| putative TolQ-like translocation protein [Bordetella parapertussis]
Length = 226
Score = 39.9 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKIL 198
+ E+D + + ++ G P IG++G + GI+ A + N+ Q + +
Sbjct: 116 MRAAYQREMDSLESHL----NFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLAAV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|209517545|ref|ZP_03266385.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209502078|gb|EEA02094.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 239
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
RS + + + ++ ++ +G + P +G++G + GI A+G+++ S
Sbjct: 103 ERSERVLRALRQALNASQRRLEFGQVLLASVGATAPFVGLLGTVWGIYHALGSIAASGQA 162
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 163 QIENVAGPVGEALIMTAFGLVVA 185
>gi|30249158|ref|NP_841228.1| MotA/TolQ/ExbB proton channel family protein [Nitrosomonas europaea
ATCC 19718]
gi|30180477|emb|CAD85082.1| MotA/TolQ/ExbB proton channel family [Nitrosomonas europaea ATCC
19718]
Length = 202
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN---LSQ 193
++ ++ ++E + +E + + + P +G+ G ++G+I+ G+
Sbjct: 82 DSPREAMKESIEEAGRVAAHELERYLTTLGTIASLSPLMGLFGTLIGMIEIFGSGTPTGG 141
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+P L I V+L GI+++ ++ + + L+ ++G
Sbjct: 142 NPIQLAHGISVALYNAAFGILVAIPSIV-FYRYFRAKVDELVLEMELQALKLVEVVHGE 199
>gi|317402477|gb|EFV83045.1| TolQ colicin import protein [Achromobacter xylosoxidans C54]
Length = 226
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKIL 198
+ E+D + + ++ G P IG++G + GI+ A + N+ Q + +
Sbjct: 116 MRAAYQREMDALESHL----NFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|293603407|ref|ZP_06685834.1| TolQ colicin import protein [Achromobacter piechaudii ATCC 43553]
gi|292818180|gb|EFF77234.1| TolQ colicin import protein [Achromobacter piechaudii ATCC 43553]
Length = 226
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKIL 198
+ E+D + + ++ G P IG++G + GI+ A + N+ Q + +
Sbjct: 116 MRAAYQREMDALESHL----NFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|209965098|ref|YP_002298013.1| protein TolQ [Rhodospirillum centenum SW]
gi|209958564|gb|ACI99200.1| protein TolQ [Rhodospirillum centenum SW]
Length = 244
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+ IE +M I + + ++ +G + P IG+ G + GI+ A ++ + S
Sbjct: 124 AQRIERVMSVTIGREMAGAERYMTVLASVGSTAPFIGLFGTVWGIMNAFTSIAAQQNTSL 183
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 184 AVVAPGIAEALFATALGLVAA 204
>gi|188534423|ref|YP_001908220.1| colicin uptake protein TolQ [Erwinia tasmaniensis Et1/99]
gi|188029465|emb|CAO97342.1| TolQ colicin import protein [Erwinia tasmaniensis Et1/99]
Length = 228
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELETL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|254302837|ref|ZP_04970195.1| ligand gated channel protein TolQ [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323029|gb|EDK88279.1| ligand gated channel protein TolQ [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 202
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
I + ++ + +E + ++ + P +G++G + G+I+A N+S
Sbjct: 86 IDVQDYEFILKEITIKETSPYESRL----NLLASVISISPMLGLLGTVTGMIRAFTNISK 141
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILSYSLC 220
I+ I +L T G++++ +
Sbjct: 142 YGAGDAAIVADGIAEALLTTAAGLMIAIPVI 172
>gi|84683928|ref|ZP_01011830.1| MotA/TolQ/ExbB proton channel family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84667681|gb|EAQ14149.1| MotA/TolQ/ExbB proton channel family protein [Rhodobacterales
bacterium HTCC2654]
Length = 222
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS--- 192
+ + L+ + K A+ + P +G++G +LG++ A L
Sbjct: 92 DDMTPEMTREEISRVAAGELFRQRKGLRALELVATIAPLVGLLGTVLGMVAAFQALEAAG 151
Query: 193 --QSPKILGTAIGVSLTGTLLGIILS 216
P L I +L T G+ ++
Sbjct: 152 SRADPSDLAGGIWEALLTTAAGMAVA 177
>gi|260222013|emb|CBA31153.1| Biopolymer transport protein exbB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 216
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ R ++ ++ + + +L ++ +G + P +G++G + GI A+ +++
Sbjct: 90 LAAAGDRGQQLTRVLRDGLHGVLQRLQSGQVLLATVGSTAPFVGLLGTVWGIYHALISIT 149
Query: 193 Q----SPKILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRL 232
S + +G +L T G+ +L+Y++ L +++++
Sbjct: 150 GGGQVSIDKISGPVGEALIMTAAGLAVAIPAVLAYNVFGRLVARLEADLE 199
>gi|260494268|ref|ZP_05814399.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_33]
gi|260198414|gb|EEW95930.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_33]
Length = 202
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
I + ++ + +E + ++ + P +G++G + G+I+A N+S
Sbjct: 86 IDVQDYEFILKEITIKETSPYESRL----NLLASVISISPMLGLLGTVTGMIRAFTNISK 141
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILSYSLC 220
I+ I +L T G++++ +
Sbjct: 142 YGTGDAAIVADGIAEALLTTAAGLMIAIPVI 172
>gi|189463877|ref|ZP_03012662.1| hypothetical protein BACINT_00210 [Bacteroides intestinalis DSM
17393]
gi|189438450|gb|EDV07435.1| hypothetical protein BACINT_00210 [Bacteroides intestinalis DSM
17393]
Length = 267
Score = 39.9 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 224
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I++ +
Sbjct: 225 VALILQVFYNYILSKIEALTSE 246
>gi|325300426|ref|YP_004260343.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
gi|324319979|gb|ADY37870.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
Length = 267
Score = 39.9 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A N+ SP ++ + V+L T+ G+I
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDNIQRAGDISPTVVAGGMKVALITTIFGLI 224
Query: 215 LS 216
++
Sbjct: 225 VA 226
>gi|285019186|ref|YP_003376897.1| biopolymer transport tolq transmembrane protein [Xanthomonas
albilineans GPE PC73]
gi|283474404|emb|CBA16905.1| probable biopolymer transport tolq transmembrane protein
[Xanthomonas albilineans]
Length = 258
Score = 39.9 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTL 210
+ ++++ + P +G+VG + GI+ M ++ S + I +L T
Sbjct: 154 DRLERNLELLANIASNAPYVGLVGTVFGIMVTMHDMINSGQQAGIAAVAPGISEALFATA 213
Query: 211 LGIILS 216
+G+ ++
Sbjct: 214 IGLFVA 219
>gi|312962756|ref|ZP_07777244.1| biopolymer transport protein TolQ [Pseudomonas fluorescens WH6]
gi|311282973|gb|EFQ61566.1| biopolymer transport protein TolQ [Pseudomonas fluorescens WH6]
Length = 231
Score = 39.9 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 50/153 (32%), Gaps = 17/153 (11%)
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSI---------PTVLENNELTTFICDYMR 131
++ NL + R E+ + ++ + + P ++ R
Sbjct: 38 VMIFQRSNLLRAGRRALESFEERFWSGIDLSKLYRQAGSNPDPDSGVEQIFRAGFKEFSR 97
Query: 132 MIIVGNARSYEIEN----LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
+ + M I + + ++ +G P IG+ G + GI+ +
Sbjct: 98 LRQQPGVDPEAVMEGVARAMRVAISREEEKLEQSLPFLATVGSVSPYIGLFGTVWGIMNS 157
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
L+Q + + I +L T +G+ +
Sbjct: 158 FRGLAQAQQATLATVAPGIAEALVATAIGLFAA 190
>gi|260568758|ref|ZP_05839226.1| ExbB family protein [Brucella suis bv. 4 str. 40]
gi|261754080|ref|ZP_05997789.1| biopolymer transporter ExbB [Brucella suis bv. 3 str. 686]
gi|260154142|gb|EEW89224.1| ExbB family protein [Brucella suis bv. 4 str. 40]
gi|261743833|gb|EEY31759.1| biopolymer transporter ExbB [Brucella suis bv. 3 str. 686]
Length = 319
Score = 39.9 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 183 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 242
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 243 TTNLAVVAPGIAEALLATAIGLVAA 267
>gi|188532604|ref|YP_001906401.1| biopolymer transport protein ExbB [Erwinia tasmaniensis Et1/99]
gi|188027646|emb|CAO95496.1| Biopolymer transport ExbB protein [Erwinia tasmaniensis Et1/99]
Length = 244
Score = 39.9 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + I + ++ +G P IG+ G + GI+ + ++Q
Sbjct: 103 DNNGIKERTAFRLERRVAAISRHAGRGNGFLATIGAVAPFIGLFGTVWGIMNSFIGIAQT 162
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 163 QTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|294055798|ref|YP_003549456.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293615131|gb|ADE55286.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 194
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
+R ++ + N +E IL++ + ++ + + P +G++G ++G++
Sbjct: 68 IRYTQENVTQAKHVRNRFEEVRQSILHDVQRRLIFLNTLVAAAPLMGLLGTVIGMLATFA 127
Query: 190 NLS-----QSPKILGTAIGVSLTGTLLGIILS 216
LS ++ I+ I +L T G+ ++
Sbjct: 128 GLSSSGGAETVDIVAAGISEALITTQTGLFIA 159
>gi|265999347|ref|ZP_05465915.2| ExbB [Brucella melitensis bv. 2 str. 63/9]
gi|263093380|gb|EEZ17449.1| ExbB [Brucella melitensis bv. 2 str. 63/9]
Length = 319
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 183 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 242
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 243 TTNLAVVAPGIAEALLATAIGLVAA 267
>gi|152998085|ref|YP_001342920.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150839009|gb|ABR72985.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 236
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 7/161 (4%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDY-MRMIIVGNARSYE 142
+L+ S + +D + +L+ + Y MR ++ N ++
Sbjct: 49 WQFSSLRAESLKTSNLALDKWRSEENGEKALEILDEKRPIDALVGYTMRALLAANTQADL 108
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKI 197
I ++ L + + + P +G++G +LG+I A + P +
Sbjct: 109 IREEVERRAMNQLNQLRSYLRPLEIIATLSPLLGLLGTVLGMITAFQQMEGAGNQVDPSV 168
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
L I +L T +G+ ++ + L S ++ +
Sbjct: 169 LSGGIWQALLTTAVGLAVAIPVVT-LHSWLERKVERVAHNM 208
>gi|114777003|ref|ZP_01452023.1| Biopolymer transport protein [Mariprofundus ferrooxydans PV-1]
gi|114552524|gb|EAU54984.1| Biopolymer transport protein [Mariprofundus ferrooxydans PV-1]
Length = 206
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ ++ +++E + + + + P +G++G ++G+I+ +S
Sbjct: 82 LANRGVNRSVMKEILEESGRQEVAHLERFVGVLGVVAAIAPLLGLLGTVIGMIEVFQQIS 141
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILS 216
+L I +L T G++++
Sbjct: 142 LVGVGKADVLAGGISKALNTTAFGLVVA 169
>gi|33594235|ref|NP_881879.1| putative TolQ-like translocation protein [Bordetella pertussis
Tohama I]
gi|33603209|ref|NP_890769.1| putative TolQ-like translocation protein [Bordetella bronchiseptica
RB50]
gi|33564310|emb|CAE43611.1| putative TolQ-like translocation protein [Bordetella pertussis
Tohama I]
gi|33568840|emb|CAE34598.1| putative TolQ-like translocation protein [Bordetella bronchiseptica
RB50]
gi|332383649|gb|AEE68496.1| putative TolQ-like translocation protein [Bordetella pertussis CS]
Length = 226
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKIL 198
+ E+D + + ++ G P IG++G + GI+ A + N+ Q + +
Sbjct: 116 MRAAYQREMDSLESHL----NFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLAAV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|121602392|ref|YP_988511.1| putative tonB-system energizer ExbB [Bartonella bacilliformis
KC583]
gi|120614569|gb|ABM45170.1| putative tonB-system energizer ExbB [Bartonella bacilliformis
KC583]
Length = 323
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----K 196
+ +L+ + + ++ +G P +G+ + GI+ + ++++
Sbjct: 198 ERVHSLLSRSLLVATQRMAAGNAILATIGAISPFVGLFATVWGIMNSFIGIAKTQTTRLD 257
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG+ ++
Sbjct: 258 VVAPGIAEALLATALGLFVA 277
>gi|296448897|ref|ZP_06890718.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296253595|gb|EFH00801.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 245
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 55/157 (35%), Gaps = 23/157 (14%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+ + L L ++ +R ID +P + + R ++ N
Sbjct: 46 IAEKLIRLGVLHRRAARL-----IDSVQKELPVADLPASFDAASPEDPLVQVYRAMVDEN 100
Query: 138 ARSYEIENLMDEEIDIILYEKLKPY--------------HAISHMGESLPAIGIVGAILG 183
ARS ++++ + + ++ +G P +G+ G + G
Sbjct: 101 ARSSDLQHSETQRDALQERVHRVGQLAAANAIDHLHARLQGLATIGAVAPFVGLFGTVWG 160
Query: 184 IIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
I+ + + + S ++ I +L T LG++ +
Sbjct: 161 IMNSFQGIAASNNTSLAVVAPGIAEALFATALGLVAA 197
>gi|224536144|ref|ZP_03676683.1| hypothetical protein BACCELL_01010 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522226|gb|EEF91331.1| hypothetical protein BACCELL_01010 [Bacteroides cellulosilyticus
DSM 14838]
Length = 267
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 224
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I++ +
Sbjct: 225 VALILQVFYNYILSKIEALTSE 246
>gi|254442543|ref|ZP_05056019.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198256851|gb|EDY81159.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 462
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
+ +E +M E++ + + I+ P +G++G + G+I +
Sbjct: 342 SDQDKELVEEVMYEKMLEAQPKVERFLSVIAVTAAVAPLLGLLGTVTGMINTFKMITLFG 401
Query: 192 SQSPKILGTAIGVSLTGTLLGIILS 216
+ L I +L T LG++++
Sbjct: 402 TGDASSLSGGISEALITTELGLVVA 426
>gi|225628238|ref|ZP_03786272.1| tonB-system energizer ExbB [Brucella ceti str. Cudo]
gi|237816045|ref|ZP_04595041.1| tonB-system energizer ExbB [Brucella abortus str. 2308 A]
gi|260547212|ref|ZP_05822950.1| ExbB protein [Brucella abortus NCTC 8038]
gi|260565827|ref|ZP_05836310.1| ExbB family protein [Brucella melitensis bv. 1 str. 16M]
gi|260755371|ref|ZP_05867719.1| biopolymer transporter ExbB [Brucella abortus bv. 6 str. 870]
gi|260758592|ref|ZP_05870940.1| biopolymer transporter ExbB [Brucella abortus bv. 4 str. 292]
gi|260762424|ref|ZP_05874761.1| biopolymer transporter ExbB [Brucella abortus bv. 2 str. 86/8/59]
gi|260884387|ref|ZP_05896001.1| ExbB [Brucella abortus bv. 9 str. C68]
gi|261219261|ref|ZP_05933542.1| biopolymer transporter ExbB [Brucella ceti M13/05/1]
gi|261222797|ref|ZP_05937078.1| ExbB [Brucella ceti B1/94]
gi|261315961|ref|ZP_05955158.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316176|ref|ZP_05955373.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322322|ref|ZP_05961519.1| ExbB [Brucella ceti M644/93/1]
gi|261325712|ref|ZP_05964909.1| ExbB [Brucella neotomae 5K33]
gi|261757325|ref|ZP_06001034.1| biopolymer transporter ExbB [Brucella sp. F5/99]
gi|265987240|ref|ZP_06099797.1| ExbB [Brucella pinnipedialis M292/94/1]
gi|265991707|ref|ZP_06104264.1| ExbB [Brucella melitensis bv. 1 str. Rev.1]
gi|265995544|ref|ZP_06108101.1| ExbB [Brucella melitensis bv. 3 str. Ether]
gi|265998755|ref|ZP_06111312.1| ExbB [Brucella ceti M490/95/1]
gi|297248943|ref|ZP_06932651.1| biopolymer transporter ExbB [Brucella abortus bv. 5 str. B3196]
gi|12802721|gb|AAK08069.1| ExbB [Brucella melitensis]
gi|225616084|gb|EEH13132.1| tonB-system energizer ExbB [Brucella ceti str. Cudo]
gi|237788708|gb|EEP62920.1| tonB-system energizer ExbB [Brucella abortus str. 2308 A]
gi|260095577|gb|EEW79455.1| ExbB protein [Brucella abortus NCTC 8038]
gi|260151200|gb|EEW86295.1| ExbB family protein [Brucella melitensis bv. 1 str. 16M]
gi|260668910|gb|EEX55850.1| biopolymer transporter ExbB [Brucella abortus bv. 4 str. 292]
gi|260672850|gb|EEX59671.1| biopolymer transporter ExbB [Brucella abortus bv. 2 str. 86/8/59]
gi|260675479|gb|EEX62300.1| biopolymer transporter ExbB [Brucella abortus bv. 6 str. 870]
gi|260873915|gb|EEX80984.1| ExbB [Brucella abortus bv. 9 str. C68]
gi|260921381|gb|EEX88034.1| ExbB [Brucella ceti B1/94]
gi|260924350|gb|EEX90918.1| biopolymer transporter ExbB [Brucella ceti M13/05/1]
gi|261295012|gb|EEX98508.1| ExbB [Brucella ceti M644/93/1]
gi|261295399|gb|EEX98895.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301692|gb|EEY05189.1| ExbB [Brucella neotomae 5K33]
gi|261304987|gb|EEY08484.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261737309|gb|EEY25305.1| biopolymer transporter ExbB [Brucella sp. F5/99]
gi|262553444|gb|EEZ09213.1| ExbB [Brucella ceti M490/95/1]
gi|262766828|gb|EEZ12446.1| ExbB [Brucella melitensis bv. 3 str. Ether]
gi|263002663|gb|EEZ15066.1| ExbB [Brucella melitensis bv. 1 str. Rev.1]
gi|264659437|gb|EEZ29698.1| ExbB [Brucella pinnipedialis M292/94/1]
gi|297174076|gb|EFH33433.1| biopolymer transporter ExbB [Brucella abortus bv. 5 str. B3196]
Length = 319
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 183 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 242
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 243 TTNLAVVAPGIAEALLATAIGLVAA 267
>gi|46201287|ref|ZP_00055338.2| COG0811: Biopolymer transport proteins [Magnetospirillum
magnetotacticum MS-1]
Length = 226
Score = 39.9 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ +M + + + ++ G + P IG+ G + GI+ + ++ + S
Sbjct: 106 PQRIDRVMSVTLGREMELLERRLGFLASTGSTAPFIGLFGTVWGIMNSFQSIAATKNTSL 165
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 166 AVVAPGIAEALFATALGLVAA 186
>gi|328952316|ref|YP_004369650.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328452640|gb|AEB08469.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 224
Score = 39.9 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT----AIGVSLTGTLLGI 213
K + + +G + P IG+ G +LGII A +L+ + G I +L T +G+
Sbjct: 110 MEKGLNFLGTLGANAPFIGLFGTVLGIIHAFKDLALTEGGGGPAVMAGIAEALVATAVGL 169
Query: 214 ILS 216
+++
Sbjct: 170 LVA 172
>gi|1685077|gb|AAC44594.1| TolQ [Haemophilus influenzae]
Length = 220
Score = 39.9 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M+ EI+ + ++ + P IG+ G + GI+ A LS + +++ I
Sbjct: 109 MNREIESLENR----VPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGI 164
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 165 AEALVATAIGLFAA 178
>gi|88860777|ref|ZP_01135414.1| hypothetical protein PTD2_05950 [Pseudoalteromonas tunicata D2]
gi|88817372|gb|EAR27190.1| hypothetical protein PTD2_05950 [Pseudoalteromonas tunicata D2]
Length = 127
Score = 39.9 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLL 211
+ + + + +LP +G++G I+G++++ +SQ +L I +L T L
Sbjct: 40 QDQQWIETLRCLINALPLLGLLGTIMGLLQSFFAMSQGGSLSASSVLTQGIANALWTTQL 99
Query: 212 GIILSYSLCN 221
G++L+
Sbjct: 100 GLVLAVPAWL 109
>gi|262368711|ref|ZP_06062040.1| TolQ protein [Acinetobacter johnsonii SH046]
gi|262316389|gb|EEY97427.1| TolQ protein [Acinetobacter johnsonii SH046]
Length = 236
Score = 39.5 bits (91), Expect = 0.50, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI----L 198
+E + I + + ++ +G P IG+ G + GI+ A LS + +
Sbjct: 115 VERRLLSSISEEEEKLQQNLTFLATVGSVSPYIGLFGTVWGIMNAFIGLSAVEQATLNTV 174
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 175 APGIAEALIATAIGLFAA 192
>gi|229017014|ref|ZP_04173934.1| Chemotaxis protein, MotA [Bacillus cereus AH1273]
gi|229023196|ref|ZP_04179707.1| Chemotaxis protein, MotA [Bacillus cereus AH1272]
gi|228738121|gb|EEL88606.1| Chemotaxis protein, MotA [Bacillus cereus AH1272]
gi|228744285|gb|EEL94367.1| Chemotaxis protein, MotA [Bacillus cereus AH1273]
Length = 91
Score = 39.5 bits (91), Expect = 0.50, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Query: 28 LIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMY 87
+ I+IV G V+A IK S+ +F + + + L
Sbjct: 20 FLDVSSILIVVGGTTATIVVAYRFGEIKKYMESIFTVFHRRE---EESGQLTDLFVDFSK 76
Query: 88 NLKKGSRNETENHID 102
KK E +
Sbjct: 77 RSKKHRLLSLEVDGE 91
>gi|319409336|emb|CBI82980.1| tolQ protein [Bartonella schoenbuchensis R1]
Length = 237
Score = 39.5 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
IE MD + + ++ +G + P IG+ G ++GI+ + ++S S +
Sbjct: 113 RIEKAMDLALGRESAKIESKLGFLATLGSAAPFIGLFGTVVGIMNSFLSISASQNTSLAV 172
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 173 VAPGIAEALLATAIGLLAA 191
>gi|260219673|emb|CBA26518.1| Biopolymer transport protein exbB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 239
Score = 39.5 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 18/180 (10%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
+ ++ L + L+I +K+L T Y + +
Sbjct: 20 SVAVLLLGMSLASWIVILIKTLDILKFKSLAARTE-------YFWHSAEFEEGIDTLGAP 72
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
D+P+ + T + D + S I + ID
Sbjct: 73 TDNPFVQLARAGQEATAHHRNTQTQLHDAL-------DISDWISRSLRNSIDDSTARFQS 125
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS----PKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + IG +L T LG+ ++
Sbjct: 126 GLAVLASVGSTAPFVGLFGTVWGIYHALMGIGASGQATIDKVAGPIGEALIMTALGLAVA 185
>gi|82523891|emb|CAI78614.1| biopolymer transport proteins [uncultured delta proteobacterium]
Length = 203
Score = 39.5 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
++ + ++ + ++ G + P IG+ G + GI+ + ++Q S ++
Sbjct: 77 LDRSLRRAMNNESQRLSRAIPFLATTGNTAPFIGLFGTVWGIMDSFHGIAQKGNASLAVV 136
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T G+I +
Sbjct: 137 APGIAEALVATAAGLIAA 154
>gi|294785126|ref|ZP_06750414.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
gi|294486840|gb|EFG34202.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
Length = 202
Score = 39.5 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 45/119 (37%), Gaps = 9/119 (7%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
I + ++ + +E + ++ + P +G++G + G+I+A N+S
Sbjct: 86 IDVQDYEFILKEITIKETSPYESRL----NLLASVISISPMLGLLGTVTGMIRAFTNISK 141
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
I+ I +L T G++++ + + + + K V +I
Sbjct: 142 YGAGDAAIVADGIAEALLTTAAGLMIAIPVIV-IYNYLNRRLEKMENEIDDVVTNIINI 199
>gi|332525522|ref|ZP_08401679.1| transmembrane protein/ biopolymer transport [Rubrivivax
benzoatilyticus JA2]
gi|332109089|gb|EGJ10012.1| transmembrane protein/ biopolymer transport [Rubrivivax
benzoatilyticus JA2]
Length = 227
Score = 39.5 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKIL 198
+ E+D I ++ +G P +G+ G + GI+ A + NL Q + +
Sbjct: 111 MRASFQRELDAIESHL----SFLASVGSVSPYVGLFGTVWGIMHAFVGLSNLQQVTLATV 166
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 167 APGIAEALVATAIGLFAA 184
>gi|110834828|ref|YP_693687.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
gi|110647939|emb|CAL17415.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
Length = 223
Score = 39.5 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 33/193 (17%)
Query: 29 IQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYN 88
+Q E I GA + + L VI + +I + + +LL
Sbjct: 6 LQLPEWFISGGATMWVLAL---LSVI-ALATFISKILQFARIRPGNSRQADQLLS----A 57
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD 148
+++G + + P + ++ N + + + +R+ G
Sbjct: 58 IRQGKPTSKPDKLTSPIDRVLWQCWEN--RNLDEAAWQEESLRLARSGLD---------- 105
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIG 203
E + + P +G++G + G+I A L P IL I
Sbjct: 106 --------ELRGGLRVLEVISAIAPLLGLLGTVFGMIGAFQALEMAGSQVDPSILSGGIW 157
Query: 204 VSLTGTLLGIILS 216
+L T G+ ++
Sbjct: 158 EALLTTAAGLTVA 170
>gi|23502525|ref|NP_698652.1| biopolymer transport protein ExbB [Brucella suis 1330]
gi|23348523|gb|AAN30567.1| biopolymer transport protein ExbB [Brucella suis 1330]
Length = 292
Score = 39.5 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 156 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 215
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 216 TTNLAVVAPGIAEALLATAIGLVAA 240
>gi|27382266|ref|NP_773795.1| tolQ protein [Bradyrhizobium japonicum USDA 110]
gi|27355437|dbj|BAC52420.1| tolQ Protein [Bradyrhizobium japonicum USDA 110]
Length = 238
Score = 39.5 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ +M+ I + + ++ +G + P +G+ G + GI+ + ++ + S
Sbjct: 118 QMRIDKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSL 177
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 178 AVVAPGIAEALFATAVGLIAA 198
>gi|124268138|ref|YP_001022142.1| transmembrane protein/ biopolymer transport [Methylibium
petroleiphilum PM1]
gi|124260913|gb|ABM95907.1| transmembrane protein/ biopolymer transport [Methylibium
petroleiphilum PM1]
Length = 227
Score = 39.5 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKIL 198
+ E+D + ++ +G P +G+ G + GI+ A + NL Q + +
Sbjct: 114 MRASFQRELDTVESHL----SFLASVGSVSPYVGLFGTVWGIMHAFTGLANLQQVTLATV 169
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 170 APGIAEALVATAIGLFAA 187
>gi|260467352|ref|ZP_05813525.1| tonB-system energizer ExbB [Mesorhizobium opportunistum WSM2075]
gi|259028879|gb|EEW30182.1| tonB-system energizer ExbB [Mesorhizobium opportunistum WSM2075]
Length = 238
Score = 39.5 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ G+ + + + + ++ +G + P +G+ G + GI+ A +SQ
Sbjct: 102 VSGDGLKERVASRLSRIEAAASRRMSRGTGVLATIGSTAPFVGLFGTVWGIMNAFIGISQ 161
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 162 AQTTNLAVVAPGIAEALLATAMGLVAA 188
>gi|298207141|ref|YP_003715320.1| MotA/TolQ/ExbB proton channel family protein [Croceibacter
atlanticus HTCC2559]
gi|83849775|gb|EAP87643.1| MotA/TolQ/ExbB proton channel family protein [Croceibacter
atlanticus HTCC2559]
Length = 246
Score = 39.5 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 8/177 (4%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ + I+ NL + + ++D NS + V N + Y + +
Sbjct: 67 IAIERIIFLNLSTTNTKKLAQDVEDALNSGGVEAAKEVCRNTKGPVASIYYQGLDRADES 126
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
+ ++ + + + K IS P +G +G ++G+I+A +
Sbjct: 127 IEAAEKAVVAYG-GVQMGQLEKNVSWISLFIALAPMLGFMGTVIGMIQAFDKIEAAGDMQ 185
Query: 195 PKILGTAIGVSLTGTLLGIILS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
P ++ I V+L T+ G+I++ N + ++I S I + L+AY
Sbjct: 186 PSLVAGGIKVALLTTVFGLIVAIILQIFYNYIIAKIDSIVNDMEDASITLIDMLVAY 242
>gi|149378072|ref|ZP_01895794.1| Biopolymer transport protein [Marinobacter algicola DG893]
gi|149357641|gb|EDM46141.1| Biopolymer transport protein [Marinobacter algicola DG893]
Length = 208
Score = 39.5 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + +M E I+ +++E + + + + P +G++G ++G+IK
Sbjct: 72 RILAGGLMNAKHGREIMKESIEHEASQVIHELERFLNPLGTVATITPLLGLLGTVIGMIK 131
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ L I +L T G+ ++
Sbjct: 132 VFAEIQLAGVGDAGNLAGGISEALITTASGLSVA 165
>gi|71065807|ref|YP_264534.1| TolQ proton channel [Psychrobacter arcticus 273-4]
gi|71038792|gb|AAZ19100.1| probable TolQ proton channel [Psychrobacter arcticus 273-4]
Length = 243
Score = 39.5 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
++ +G P +G+ G + GI+ A LSQ+ + I +L T +G+ +
Sbjct: 129 LASIGSVAPYVGLFGTVWGIMNAFLGLSQNEQATLAAVAPGIAEALIATAMGLFAA 184
>gi|30248239|ref|NP_840309.1| MotA/TolQ/ExbB proton channel family protein [Nitrosomonas europaea
ATCC 19718]
gi|30180124|emb|CAD84126.1| MotA/TolQ/ExbB proton channel family [Nitrosomonas europaea ATCC
19718]
Length = 234
Score = 39.5 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ + E+D + ++ +G P +G+ G + GI+ A LS + +
Sbjct: 115 MRAVYQREMDRLESHL----SFLATVGSVSPYVGLFGTVWGIMNAFRELSNVGQATIAHV 170
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 APGIAEALIATAMGLFAA 188
>gi|308048948|ref|YP_003912514.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307631138|gb|ADN75440.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 217
Score = 39.5 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PK 196
+ E L+ + ++ +G P +G++G ++G+I L+ S P
Sbjct: 86 DREALLSLWLTAARRRANTNLRLLTAVGVIAPLLGLLGTVIGLITMFETLANSGGPATPA 145
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L +G+++ T G+ ++
Sbjct: 146 MLAEGLGLAMGTTAAGLAIA 165
>gi|268317274|ref|YP_003290993.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
gi|262334808|gb|ACY48605.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
Length = 241
Score = 39.5 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 172 LPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS---YSLCNPLT 224
P G +G ++G+++A + Q SP ++ I V+L T+ G+I + N
Sbjct: 140 APMFGFLGTVVGMVQAFDAIEQAGDISPSLVAGGIKVALLTTVFGLITAIILQFFYNYAV 199
Query: 225 SQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYG 261
S+I + I + +L+ G P A E
Sbjct: 200 SKIDRIVVDMEEASIELIDSLVLMQAGR-PLTAAEKA 235
>gi|121594748|ref|YP_986644.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|222110639|ref|YP_002552903.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|120606828|gb|ABM42568.1| outer membrane transport energization protein ExbB [Acidovorax sp.
JS42]
gi|221730083|gb|ACM32903.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 238
Score = 39.5 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 55/180 (30%), Gaps = 18/180 (10%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
+ ++ L + L+I +K + + +
Sbjct: 20 AVAVLLIGMSLASWIVIIIKALDILKFKKHARQAR-------DFWHSEDFAAGLTKLGSD 72
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
+P+ LE E T + + S + + ID
Sbjct: 73 PSNPFR-------HLALEGREATQHHRNTQAHLHDSLDVSDWVTRCLRNCIDEFTARVQS 125
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI A+ + + + IG +L T LG+ ++
Sbjct: 126 GLAILASVGSTAPFIGLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLAVA 185
>gi|323140667|ref|ZP_08075589.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067]
gi|322414852|gb|EFY05649.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067]
Length = 706
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 72/198 (36%), Gaps = 26/198 (13%)
Query: 49 NPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH---IDDPY 105
N +I G+ ++ + ++ Y ++ + L+K + E +N +D
Sbjct: 14 NSFTIILTIGIVVVMLVVMYRYWKNFYKKQDLIIISINDTLEKIGKLEIKNASDNYEDIK 73
Query: 106 NSTIFTSIPTVL-----ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
N I + + +N+ I + +A +Y N + + + +
Sbjct: 74 NIFIKSDLLKSAWLGYKKNHFFMKDINGKTVVFTTDDADNYFNYNNLTSQYNAM------ 127
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNL------SQSPKILGTAIGVSLTGTLLGII 214
++G +GI+G +G+ +G + ++ L + + + +L GI+
Sbjct: 128 ---FWQNLGGVFTGLGILGTFVGLSVGLGTINLEHITNEEIGNLVSGMSTAFITSLCGIV 184
Query: 215 LS---YSLCNPLTSQIKS 229
+ + +T ++
Sbjct: 185 FALFYNWIHKHITDKLSQ 202
>gi|303249617|ref|ZP_07335823.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253229|ref|ZP_07535104.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651550|gb|EFL81700.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859317|gb|EFM91355.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 222
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G P IG+ G + GI A+ ++SQ S + IG +L T +G+ ++
Sbjct: 126 ALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLFVA 182
>gi|288926924|ref|ZP_06420823.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
D17]
gi|288336322|gb|EFC74704.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
D17]
Length = 227
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + SP I+ + + V+L T+ GII
Sbjct: 126 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIELAGDISPTIVASGMKVALITTIFGII 185
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I+ +
Sbjct: 186 VALILQVFYNYILSKIEHITSQ 207
>gi|171057671|ref|YP_001790020.1| Ste24 endopeptidase [Leptothrix cholodnii SP-6]
gi|170775116|gb|ACB33255.1| Ste24 endopeptidase [Leptothrix cholodnii SP-6]
Length = 427
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 79/237 (33%), Gaps = 22/237 (9%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
+GL IT+ + + + L + + A L + + +
Sbjct: 163 VGLVITLPLV-AALLWLMASAGSLWWLWAF---------ALLAAFTLLMQVLYPTVIAPL 212
Query: 65 FGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTT 124
F + D + + + G + + +D S + T ++
Sbjct: 213 FN----KFEPLADTAMVQRVQALMQRCGFKAQGLYVMDGSKRSAHANAYFTGFGASKRVV 268
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F ++ + EIE ++ E+ + P + M L ++ ++G ++G
Sbjct: 269 FFDTLLKRLS-----PEEIEAVLAHELGHFHHRH-VPKRIATVMAVWLFSLALLGWLMGQ 322
Query: 185 IKAMGNLSQSPKILGTAIGVSLTGTLL-GIILSYSLCNPLTSQIKSTRLKQHRLYII 240
L +P IL G++L ++ G + S+ PLT+ + + Y
Sbjct: 323 PAFYVGLGVTPDILAPNHGLALVLLMMVGPVFSF-FVTPLTAALSRRHEFEADAYAC 378
>gi|156934769|ref|YP_001438685.1| colicin uptake protein TolQ [Cronobacter sakazakii ATCC BAA-894]
gi|156533023|gb|ABU77849.1| hypothetical protein ESA_02609 [Cronobacter sakazakii ATCC BAA-894]
Length = 231
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELETLETH----IPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|82776015|ref|YP_402362.1| colicin uptake protein TolQ [Shigella dysenteriae Sd197]
gi|81240163|gb|ABB60873.1| inner membrane protein [Shigella dysenteriae Sd197]
Length = 230
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 112 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 171
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 172 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|39934314|ref|NP_946590.1| putative biopolymer transport protein ExbB [Rhodopseudomonas
palustris CGA009]
gi|39648162|emb|CAE26682.1| putative biopolymer transport protein ExbB [Rhodopseudomonas
palustris CGA009]
Length = 328
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + + ++ +G P +G+ G + GI+ A +S+ +
Sbjct: 203 ERVALRLERVEAAMARKIASGTGILATVGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLA 262
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 263 VVAPGIAEALLATALGLVAA 282
>gi|83943915|ref|ZP_00956372.1| proton transporter TolQ [Sulfitobacter sp. EE-36]
gi|83954488|ref|ZP_00963199.1| proton transporter TolQ [Sulfitobacter sp. NAS-14.1]
gi|83840772|gb|EAP79943.1| proton transporter TolQ [Sulfitobacter sp. NAS-14.1]
gi|83845162|gb|EAP83042.1| proton transporter TolQ [Sulfitobacter sp. EE-36]
Length = 231
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----I 197
I+ MD I K ++ G + P IG+ G + GI+ + ++ +
Sbjct: 115 RIDRSMDVAIAKEAERLQKGLPVLATTGSTAPFIGLFGTVFGIMNSFIEIAAQQNTSLVV 174
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I +L T +G++ + +++ + + Y
Sbjct: 175 VAPGIAEALLATGIGLLAAIPAVI-FYNKLSADSDRILGGYE 215
>gi|292493798|ref|YP_003529237.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582393|gb|ADE16850.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 494
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 145 NLMDEEIDIILYEKLK---PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
+L D + IL+E I + P +G++G + G+I +++ PK+
Sbjct: 359 HLEDIISEAILHESAHLNRFGSMILIIAAISPLLGLLGTVTGMISTFDIITEFGTGDPKL 418
Query: 198 LGTAIGVSLTGTLLGIILS 216
L + I ++L T +G+ ++
Sbjct: 419 LSSGISIALITTEVGLAVA 437
>gi|237746079|ref|ZP_04576559.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
gi|229377430|gb|EEO27521.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
Length = 235
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 14/124 (11%)
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLM----------DEEIDIILY 156
S + T E+N D + ++ M ID +
Sbjct: 64 SAGLEMLETAPEDNPFHALARDGLIAAKHYTEGPEKLRERMGMAEWLTENLRGSIDESMA 123
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLG 212
+ A++ +G + P IG+ G + GI A+ ++ S + +G SL T LG
Sbjct: 124 KMQHGLSALASIGATAPFIGLFGTVWGIYHALVSIGVSGQASIDKIAGPVGESLIMTALG 183
Query: 213 IILS 216
+ ++
Sbjct: 184 LAVA 187
>gi|195953081|ref|YP_002121371.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
gi|195932693|gb|ACG57393.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
Length = 145
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 117 LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL---- 172
LE F+ ++ +I Y+ + + +I + + Y I+ + +S+
Sbjct: 3 LEMFHKAVFVIMFVIFVISNYVIVYKFIQISKIKKEINRSSEKEAYKLITKLKDSMWILD 62
Query: 173 ------PAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS--YSLC 220
P +G++G+IL +I++ NL++ +P ++ +IG +L T GI L+ +
Sbjct: 63 FGITSGPLLGLLGSILALIESFANLAERGISNPVVISKSIGFALVATAFGICLALWDLVF 122
Query: 221 NPLTSQIKSTRLKQHRL 237
+ + + ++ +L
Sbjct: 123 YKMLNDMIRNIKEEAKL 139
>gi|118602712|ref|YP_903927.1| MotA/TolQ/ExbB proton channel [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567651|gb|ABL02456.1| Cell division and transport-associated protein TolQ [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 223
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 12/138 (8%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
+ +L+K + + I+ IF+ ELT D+ +++I+ R+Y
Sbjct: 56 FSANIDLEKLAYQTLKKDINQSSMERIFS-----TGFQELTHTTSDFNQVLIIDAERAYR 110
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ N M + ++ + S P IG+ G + GI+ + L+ + I+
Sbjct: 111 VMNTMANNE---VNRLDSGLSILAMIASSSPYIGLFGTVWGIMHSFIGLASVKQATVAIV 167
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T G+ +
Sbjct: 168 APGIAEALIATAFGLFAA 185
>gi|82700456|ref|YP_415030.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|256370079|ref|YP_003107590.1| biopolymer transport protein ExbB [Brucella microti CCM 4915]
gi|82616557|emb|CAJ11635.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|256000242|gb|ACU48641.1| biopolymer transport protein ExbB [Brucella microti CCM 4915]
gi|326539386|gb|ADZ87601.1| TonB-system energizer ExbB [Brucella melitensis M5-90]
Length = 292
Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 156 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 215
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 216 TTNLAVVAPGIAEALLATAIGLVAA 240
>gi|332877800|ref|ZP_08445539.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684265|gb|EGJ57123.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 282
Score = 39.5 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q SP I+ + V+L T+ GII
Sbjct: 182 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQQAGDISPTIVAGGMKVALITTIFGII 241
Query: 215 LS 216
++
Sbjct: 242 VA 243
>gi|297171897|gb|ADI22884.1| biopolymer transport proteins [uncultured Rhizobium sp.
HF0500_35F13]
Length = 285
Score = 39.5 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPK 196
++E M++ + + + +S +G P +G++G ++G+I A + S
Sbjct: 149 DVEKAMEDATEEQSAQLFRRVEYLSVIGNIAPMVGLLGTVIGMIVAFQEVAATQGSAGAG 208
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLT---SQIKSTRLK 233
L I +L T+ G+I++ ++I +
Sbjct: 209 DLAAGIYQALVTTVGGLIVAIPSLGAFAVFRNRIDQLVAE 248
>gi|319903086|ref|YP_004162814.1| MotA/TolQ/ExbB proton channel [Bacteroides helcogenes P 36-108]
gi|319418117|gb|ADV45228.1| MotA/TolQ/ExbB proton channel [Bacteroides helcogenes P 36-108]
Length = 271
Score = 39.5 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 169 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 228
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I++ +
Sbjct: 229 VALILQVFYNYILSKIEALTSE 250
>gi|295688120|ref|YP_003591813.1| protein TolQ [Caulobacter segnis ATCC 21756]
gi|295430023|gb|ADG09195.1| protein TolQ [Caulobacter segnis ATCC 21756]
Length = 231
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ ++D I + + +++ + + P IG+ G + GI+ A N+ + S +
Sbjct: 113 RIDRILDTMIARETAKVEEGLGSLAIVATASPFIGLFGTVWGIMHAFQNIALSKNTSLAV 172
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ +I +L T +G+I +
Sbjct: 173 VAPSIAEALFATAVGLIAA 191
>gi|93005964|ref|YP_580401.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
gi|92393642|gb|ABE74917.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
Length = 246
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
++ +G P +G+ G + GI+ A LSQ+ + I +L T +G+ +
Sbjct: 129 LASIGSVAPYVGLFGTVWGIMNAFLGLSQNEQATLAAVAPGIAEALIATAMGLFAA 184
>gi|34763646|ref|ZP_00144574.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|237742306|ref|ZP_04572787.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256845585|ref|ZP_05551043.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_36A2]
gi|27886655|gb|EAA23820.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|229429954|gb|EEO40166.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256719144|gb|EEU32699.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_36A2]
Length = 202
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 45/119 (37%), Gaps = 9/119 (7%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
I + ++ + +E + ++ + P +G++G + G+I+A N+S
Sbjct: 86 IDVQDYEFILKEITIKETSPYESRL----NLLASVISISPMLGLLGTVTGMIRAFTNISK 141
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
I+ I +L T G++++ + + + + K V +I
Sbjct: 142 YGAGDAAIVADGIAEALLTTAAGLMIAIPVIV-IYNYLNRRLEKMENEIDDVVTNIINI 199
>gi|309786416|ref|ZP_07681042.1| protein TolQ [Shigella dysenteriae 1617]
gi|308925810|gb|EFP71291.1| protein TolQ [Shigella dysenteriae 1617]
Length = 227
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 109 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 168
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 169 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|296272875|ref|YP_003655506.1| peptidase M48 Ste24p [Arcobacter nitrofigilis DSM 7299]
gi|296097049|gb|ADG92999.1| peptidase M48 Ste24p [Arcobacter nitrofigilis DSM 7299]
Length = 251
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 12/176 (6%)
Query: 69 ALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICD 128
ALG+ +Y D LK ++ + E I N + +++N E F
Sbjct: 39 ALGEKSYEDTLKKSEVITNTKESKKIKEIGQKIAKVVNRKDYKWEFNLVKNKEKNAFCLP 98
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
++++ S + + H M + A G +LG I +
Sbjct: 99 GGKVVVYTGILSVAKNDDQLATVMSHEIAHALARHGAERMTTGMLAQG--AQVLGNI-VL 155
Query: 189 GNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
G+ Q+P+ GT G++L Y +++ + + ++++ K
Sbjct: 156 GS--QAPEYTNAFNAAYGLGTQYGVLLPYG-------RMQESEADEIGIHLMYKAG 202
>gi|265984685|ref|ZP_06097420.1| biopolymer transport channel protein [Brucella sp. 83/13]
gi|264663277|gb|EEZ33538.1| biopolymer transport channel protein [Brucella sp. 83/13]
Length = 319
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 183 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 242
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 243 TTNLAVVAPGIAEALLATAIGLVAA 267
>gi|255534208|ref|YP_003094579.1| MotA/TolQ/ExbB family biopolymer transport prote in
[Flavobacteriaceae bacterium 3519-10]
gi|255340404|gb|ACU06517.1| MotA/TolQ/ExbB family biopolymer transport prote in
[Flavobacteriaceae bacterium 3519-10]
Length = 226
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 14/161 (8%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTS--IPTVLENNELTTFICDYMRMIIVGNARS 140
Y+ + K + N EN D I T+ +++ E R+
Sbjct: 54 YLFIKRSSKETPNFLENIKDFVQEGKIQTAVDYCKTIDSPEARMIEKGLARI----GRPI 109
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SP 195
+I N M + + + + K + ++ + P +G +G ++G+I A +S SP
Sbjct: 110 SDISNAMQNQGQLEVSKLEKNLNILASASGAAPMLGFLGTVVGMIMAFFEISNVTGAVSP 169
Query: 196 KILGTAIGVSLTGTLLGIIL---SYSLCNPLTSQIKSTRLK 233
K+L + I ++ T +G+ + +Y N L + + LK
Sbjct: 170 KLLASGIYTAMATTAVGLFVGIPAYFFYNILVTNVDRLVLK 210
>gi|218549690|ref|YP_002383481.1| colicin uptake protein TolQ [Escherichia fergusonii ATCC 35469]
gi|218357231|emb|CAQ89866.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
fergusonii ATCC 35469]
gi|324114856|gb|EGC08824.1| TolQ protein [Escherichia fergusonii B253]
Length = 230
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 112 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 171
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 172 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|161619600|ref|YP_001593487.1| tonB-system energizer ExbB [Brucella canis ATCC 23365]
gi|254703450|ref|ZP_05165278.1| tonB-system energizer ExbB [Brucella suis bv. 3 str. 686]
gi|161336411|gb|ABX62716.1| tonB-system energizer ExbB [Brucella canis ATCC 23365]
Length = 307
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 171 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 230
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 231 TTNLAVVAPGIAEALLATAIGLVAA 255
>gi|194099155|ref|YP_002002240.1| ExbB [Neisseria gonorrhoeae NCCP11945]
gi|239999452|ref|ZP_04719376.1| ExbB [Neisseria gonorrhoeae 35/02]
gi|240014627|ref|ZP_04721540.1| ExbB [Neisseria gonorrhoeae DGI18]
gi|240017073|ref|ZP_04723613.1| ExbB [Neisseria gonorrhoeae FA6140]
gi|240081291|ref|ZP_04725834.1| ExbB [Neisseria gonorrhoeae FA19]
gi|240113499|ref|ZP_04727989.1| ExbB [Neisseria gonorrhoeae MS11]
gi|240116150|ref|ZP_04730212.1| ExbB [Neisseria gonorrhoeae PID18]
gi|240118433|ref|ZP_04732495.1| ExbB [Neisseria gonorrhoeae PID1]
gi|240121151|ref|ZP_04734113.1| ExbB [Neisseria gonorrhoeae PID24-1]
gi|240123977|ref|ZP_04736933.1| ExbB [Neisseria gonorrhoeae PID332]
gi|240126179|ref|ZP_04739065.1| ExbB [Neisseria gonorrhoeae SK-92-679]
gi|240128656|ref|ZP_04741317.1| ExbB [Neisseria gonorrhoeae SK-93-1035]
gi|254494167|ref|ZP_05107338.1| biopolymer transporter exbB [Neisseria gonorrhoeae 1291]
gi|260440039|ref|ZP_05793855.1| ExbB [Neisseria gonorrhoeae DGI2]
gi|268599567|ref|ZP_06133734.1| biopolymer transporter exbB [Neisseria gonorrhoeae MS11]
gi|268601815|ref|ZP_06135982.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID18]
gi|268604147|ref|ZP_06138314.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID1]
gi|268682605|ref|ZP_06149467.1| biopolymer transporter ExbB [Neisseria gonorrhoeae PID332]
gi|268684765|ref|ZP_06151627.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-92-679]
gi|268687045|ref|ZP_06153907.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-93-1035]
gi|3913608|sp|O06433|EXBB_NEIGO RecName: Full=Biopolymer transport protein exbB
gi|2098622|gb|AAC45287.1| ExbB [Neisseria gonorrhoeae]
gi|193934445|gb|ACF30269.1| ExbB [Neisseria gonorrhoeae NCCP11945]
gi|226513207|gb|EEH62552.1| biopolymer transporter exbB [Neisseria gonorrhoeae 1291]
gi|268583698|gb|EEZ48374.1| biopolymer transporter exbB [Neisseria gonorrhoeae MS11]
gi|268585946|gb|EEZ50622.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID18]
gi|268588278|gb|EEZ52954.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID1]
gi|268622889|gb|EEZ55289.1| biopolymer transporter ExbB [Neisseria gonorrhoeae PID332]
gi|268625049|gb|EEZ57449.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-92-679]
gi|268627329|gb|EEZ59729.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-93-1035]
gi|317164700|gb|ADV08241.1| ExbB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 220
Score = 39.5 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 126 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 182
>gi|114570969|ref|YP_757649.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
gi|114341431|gb|ABI66711.1| Cell division and transport-associated protein TolQ [Maricaulis
maris MCS10]
Length = 222
Score = 39.5 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGT 209
+ E ++ + + P +G+ G + GI+ A ++ + ++ I +L T
Sbjct: 119 QMTESEGGLGILATIASAAPFVGLFGTVWGIMNAFRSIAASQDTNLAVVAPGIAEALFAT 178
Query: 210 LLGIILS 216
LG++ +
Sbjct: 179 ALGLLAA 185
>gi|15800453|ref|NP_286465.1| colicin uptake protein TolQ [Escherichia coli O157:H7 EDL933]
gi|15830026|ref|NP_308799.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. Sakai]
gi|16128712|ref|NP_415265.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. MG1655]
gi|24111987|ref|NP_706497.1| colicin uptake protein TolQ [Shigella flexneri 2a str. 301]
gi|30062100|ref|NP_836271.1| colicin uptake protein TolQ [Shigella flexneri 2a str. 2457T]
gi|74311261|ref|YP_309680.1| colicin uptake protein TolQ [Shigella sonnei Ss046]
gi|82543164|ref|YP_407111.1| colicin uptake protein TolQ [Shigella boydii Sb227]
gi|89107595|ref|AP_001375.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. W3110]
gi|157156530|ref|YP_001461898.1| colicin uptake protein TolQ [Escherichia coli E24377A]
gi|157160220|ref|YP_001457538.1| colicin uptake protein TolQ [Escherichia coli HS]
gi|168757202|ref|ZP_02782209.1| protein TolQ [Escherichia coli O157:H7 str. EC4401]
gi|168765423|ref|ZP_02790430.1| protein TolQ [Escherichia coli O157:H7 str. EC4501]
gi|168779232|ref|ZP_02804239.1| protein TolQ [Escherichia coli O157:H7 str. EC4076]
gi|168786903|ref|ZP_02811910.1| protein TolQ [Escherichia coli O157:H7 str. EC869]
gi|170080404|ref|YP_001729724.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170681028|ref|YP_001742848.1| colicin uptake protein TolQ [Escherichia coli SMS-3-5]
gi|187733296|ref|YP_001879394.1| colicin uptake protein TolQ [Shigella boydii CDC 3083-94]
gi|188025332|ref|ZP_02777768.2| protein TolQ [Escherichia coli O157:H7 str. EC4113]
gi|188492595|ref|ZP_02999865.1| protein TolQ [Escherichia coli 53638]
gi|189402927|ref|ZP_02792196.2| protein TolQ [Escherichia coli O157:H7 str. EC4486]
gi|191169780|ref|ZP_03031423.1| protein TolQ [Escherichia coli B7A]
gi|194429041|ref|ZP_03061572.1| protein TolQ [Escherichia coli B171]
gi|194439232|ref|ZP_03071312.1| protein TolQ [Escherichia coli 101-1]
gi|195939089|ref|ZP_03084471.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. EC4024]
gi|208805902|ref|ZP_03248239.1| protein TolQ [Escherichia coli O157:H7 str. EC4206]
gi|208815454|ref|ZP_03256633.1| protein TolQ [Escherichia coli O157:H7 str. EC4045]
gi|208823284|ref|ZP_03263602.1| protein TolQ [Escherichia coli O157:H7 str. EC4042]
gi|209398857|ref|YP_002269371.1| protein TolQ [Escherichia coli O157:H7 str. EC4115]
gi|209917988|ref|YP_002292072.1| colicin uptake protein TolQ [Escherichia coli SE11]
gi|217326027|ref|ZP_03442111.1| protein TolQ [Escherichia coli O157:H7 str. TW14588]
gi|218553264|ref|YP_002386177.1| colicin uptake protein TolQ [Escherichia coli IAI1]
gi|218694161|ref|YP_002401828.1| colicin uptake protein TolQ [Escherichia coli 55989]
gi|218699109|ref|YP_002406738.1| colicin uptake protein TolQ [Escherichia coli IAI39]
gi|218704064|ref|YP_002411583.1| colicin uptake protein TolQ [Escherichia coli UMN026]
gi|238900002|ref|YP_002925798.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli BW2952]
gi|253774292|ref|YP_003037123.1| colicin uptake protein TolQ [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160807|ref|YP_003043915.1| colicin uptake protein TolQ [Escherichia coli B str. REL606]
gi|254791894|ref|YP_003076731.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. TW14359]
gi|256023660|ref|ZP_05437525.1| colicin uptake protein TolQ [Escherichia sp. 4_1_40B]
gi|260842943|ref|YP_003220721.1| membrane spanning protein TolQ [Escherichia coli O103:H2 str.
12009]
gi|260853972|ref|YP_003227863.1| membrane spanning protein TolQ [Escherichia coli O26:H11 str.
11368]
gi|260866868|ref|YP_003233270.1| membrane spanning protein TolQ [Escherichia coli O111:H- str.
11128]
gi|261224448|ref|ZP_05938729.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli O157:H7 str. FRIK2000]
gi|261254561|ref|ZP_05947094.1| membrane spanning protein TolQ [Escherichia coli O157:H7 str.
FRIK966]
gi|291281680|ref|YP_003498498.1| Inner membrane protein [Escherichia coli O55:H7 str. CB9615]
gi|300816386|ref|ZP_07096608.1| protein TolQ [Escherichia coli MS 107-1]
gi|300822974|ref|ZP_07103109.1| protein TolQ [Escherichia coli MS 119-7]
gi|300900744|ref|ZP_07118893.1| protein TolQ [Escherichia coli MS 198-1]
gi|300906996|ref|ZP_07124665.1| protein TolQ [Escherichia coli MS 84-1]
gi|300918398|ref|ZP_07134998.1| protein TolQ [Escherichia coli MS 115-1]
gi|300926141|ref|ZP_07141954.1| protein TolQ [Escherichia coli MS 182-1]
gi|300929457|ref|ZP_07144925.1| protein TolQ [Escherichia coli MS 187-1]
gi|300937792|ref|ZP_07152588.1| protein TolQ [Escherichia coli MS 21-1]
gi|300947182|ref|ZP_07161392.1| protein TolQ [Escherichia coli MS 116-1]
gi|300957686|ref|ZP_07169875.1| protein TolQ [Escherichia coli MS 175-1]
gi|301020791|ref|ZP_07184855.1| protein TolQ [Escherichia coli MS 69-1]
gi|301027081|ref|ZP_07190453.1| protein TolQ [Escherichia coli MS 196-1]
gi|301305225|ref|ZP_07211323.1| protein TolQ [Escherichia coli MS 124-1]
gi|301327930|ref|ZP_07221101.1| protein TolQ [Escherichia coli MS 78-1]
gi|301648042|ref|ZP_07247809.1| protein TolQ [Escherichia coli MS 146-1]
gi|307137350|ref|ZP_07496706.1| colicin uptake protein TolQ [Escherichia coli H736]
gi|307314798|ref|ZP_07594392.1| protein TolQ [Escherichia coli W]
gi|309797452|ref|ZP_07691844.1| protein TolQ [Escherichia coli MS 145-7]
gi|331641238|ref|ZP_08342373.1| protein TolQ [Escherichia coli H736]
gi|331651745|ref|ZP_08352764.1| protein TolQ [Escherichia coli M718]
gi|331662097|ref|ZP_08363020.1| protein TolQ [Escherichia coli TA143]
gi|331667104|ref|ZP_08367969.1| protein TolQ [Escherichia coli TA271]
gi|331672259|ref|ZP_08373050.1| protein TolQ [Escherichia coli TA280]
gi|331676419|ref|ZP_08377116.1| protein TolQ [Escherichia coli H591]
gi|332282414|ref|ZP_08394827.1| membrane-spanning inner membrane protein [Shigella sp. D9]
gi|78103355|sp|P0ABV0|TOLQ_ECO57 RecName: Full=Protein tolQ
gi|78103356|sp|P0ABU9|TOLQ_ECOLI RecName: Full=Protein tolQ
gi|78103357|sp|P0ABV1|TOLQ_SHIFL RecName: Full=Protein tolQ
gi|12513670|gb|AAG55073.1|AE005252_9 inner membrane protein, membrane-spanning, maintains integrity of
cell envelope; tolerance to group A colicins
[Escherichia coli O157:H7 str. EDL933]
gi|1128978|gb|AAA83919.1| ORF 2; putative [Escherichia coli]
gi|1651329|dbj|BAA35403.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K12 substr. W3110]
gi|1786958|gb|AAC73831.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. MG1655]
gi|13360231|dbj|BAB34195.1| inner membrane protein TolQ [Escherichia coli O157:H7 str. Sakai]
gi|24050800|gb|AAN42204.1| inner membrane protein TolQ [Shigella flexneri 2a str. 301]
gi|30040344|gb|AAP16077.1| inner membrane protein TolQ [Shigella flexneri 2a str. 2457T]
gi|73854738|gb|AAZ87445.1| membrane-spanning inner membrane protein [Shigella sonnei Ss046]
gi|81244575|gb|ABB65283.1| TolQ [Shigella boydii Sb227]
gi|157065900|gb|ABV05155.1| protein TolQ [Escherichia coli HS]
gi|157078560|gb|ABV18268.1| protein TolQ [Escherichia coli E24377A]
gi|169888239|gb|ACB01946.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170518746|gb|ACB16924.1| protein TolQ [Escherichia coli SMS-3-5]
gi|187430288|gb|ACD09562.1| protein TolQ [Shigella boydii CDC 3083-94]
gi|188013541|gb|EDU51663.1| protein TolQ [Escherichia coli O157:H7 str. EC4113]
gi|188487794|gb|EDU62897.1| protein TolQ [Escherichia coli 53638]
gi|189002913|gb|EDU71899.1| protein TolQ [Escherichia coli O157:H7 str. EC4076]
gi|189355762|gb|EDU74181.1| protein TolQ [Escherichia coli O157:H7 str. EC4401]
gi|189363406|gb|EDU81825.1| protein TolQ [Escherichia coli O157:H7 str. EC4486]
gi|189364863|gb|EDU83279.1| protein TolQ [Escherichia coli O157:H7 str. EC4501]
gi|189373046|gb|EDU91462.1| protein TolQ [Escherichia coli O157:H7 str. EC869]
gi|190900178|gb|EDV60084.1| protein TolQ [Escherichia coli B7A]
gi|194412872|gb|EDX29163.1| protein TolQ [Escherichia coli B171]
gi|194421817|gb|EDX37824.1| protein TolQ [Escherichia coli 101-1]
gi|208725703|gb|EDZ75304.1| protein TolQ [Escherichia coli O157:H7 str. EC4206]
gi|208732102|gb|EDZ80790.1| protein TolQ [Escherichia coli O157:H7 str. EC4045]
gi|208737477|gb|EDZ85161.1| protein TolQ [Escherichia coli O157:H7 str. EC4042]
gi|209160257|gb|ACI37690.1| protein TolQ [Escherichia coli O157:H7 str. EC4115]
gi|209776408|gb|ACI86516.1| inner membrane protein TolQ [Escherichia coli]
gi|209776410|gb|ACI86517.1| inner membrane protein TolQ [Escherichia coli]
gi|209776412|gb|ACI86518.1| inner membrane protein TolQ [Escherichia coli]
gi|209776414|gb|ACI86519.1| inner membrane protein TolQ [Escherichia coli]
gi|209776416|gb|ACI86520.1| inner membrane protein TolQ [Escherichia coli]
gi|209911247|dbj|BAG76321.1| TolQ protein [Escherichia coli SE11]
gi|217322248|gb|EEC30672.1| protein TolQ [Escherichia coli O157:H7 str. TW14588]
gi|218350893|emb|CAU96591.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli 55989]
gi|218360032|emb|CAQ97579.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli IAI1]
gi|218369095|emb|CAR16849.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli IAI39]
gi|218431161|emb|CAR12037.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli UMN026]
gi|238861744|gb|ACR63742.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli BW2952]
gi|242376499|emb|CAQ31203.1| tolQ, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4
Transport System and The Colicin A Import System
[Escherichia coli BL21(DE3)]
gi|253325336|gb|ACT29938.1| protein TolQ [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972708|gb|ACT38379.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli B str. REL606]
gi|253976902|gb|ACT42572.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli BL21(DE3)]
gi|254591294|gb|ACT70655.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli O157:H7 str. TW14359]
gi|257752621|dbj|BAI24123.1| membrane spanning protein TolQ [Escherichia coli O26:H11 str.
11368]
gi|257758090|dbj|BAI29587.1| membrane spanning protein TolQ [Escherichia coli O103:H2 str.
12009]
gi|257763224|dbj|BAI34719.1| membrane spanning protein TolQ [Escherichia coli O111:H- str.
11128]
gi|260450109|gb|ACX40531.1| protein TolQ [Escherichia coli DH1]
gi|281599947|gb|ADA72931.1| Inner membrane protein [Shigella flexneri 2002017]
gi|284920524|emb|CBG33586.1| colicin import protein [Escherichia coli 042]
gi|290761553|gb|ADD55514.1| Inner membrane protein [Escherichia coli O55:H7 str. CB9615]
gi|299879415|gb|EFI87626.1| protein TolQ [Escherichia coli MS 196-1]
gi|300315604|gb|EFJ65388.1| protein TolQ [Escherichia coli MS 175-1]
gi|300355803|gb|EFJ71673.1| protein TolQ [Escherichia coli MS 198-1]
gi|300398437|gb|EFJ81975.1| protein TolQ [Escherichia coli MS 69-1]
gi|300401217|gb|EFJ84755.1| protein TolQ [Escherichia coli MS 84-1]
gi|300414461|gb|EFJ97771.1| protein TolQ [Escherichia coli MS 115-1]
gi|300417840|gb|EFK01151.1| protein TolQ [Escherichia coli MS 182-1]
gi|300453168|gb|EFK16788.1| protein TolQ [Escherichia coli MS 116-1]
gi|300457157|gb|EFK20650.1| protein TolQ [Escherichia coli MS 21-1]
gi|300462566|gb|EFK26059.1| protein TolQ [Escherichia coli MS 187-1]
gi|300524515|gb|EFK45584.1| protein TolQ [Escherichia coli MS 119-7]
gi|300531076|gb|EFK52138.1| protein TolQ [Escherichia coli MS 107-1]
gi|300839537|gb|EFK67297.1| protein TolQ [Escherichia coli MS 124-1]
gi|300845573|gb|EFK73333.1| protein TolQ [Escherichia coli MS 78-1]
gi|301073868|gb|EFK88674.1| protein TolQ [Escherichia coli MS 146-1]
gi|306905696|gb|EFN36224.1| protein TolQ [Escherichia coli W]
gi|308118976|gb|EFO56238.1| protein TolQ [Escherichia coli MS 145-7]
gi|309700959|emb|CBJ00256.1| colicin import protein [Escherichia coli ETEC H10407]
gi|315059980|gb|ADT74307.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli W]
gi|315257656|gb|EFU37624.1| protein TolQ [Escherichia coli MS 85-1]
gi|320193142|gb|EFW67782.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. EC1212]
gi|320637995|gb|EFX07764.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. G5101]
gi|320643390|gb|EFX12570.1| colicin uptake protein TolQ [Escherichia coli O157:H- str. 493-89]
gi|320648739|gb|EFX17372.1| colicin uptake protein TolQ [Escherichia coli O157:H- str. H 2687]
gi|320654323|gb|EFX22376.1| colicin uptake protein TolQ [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320659955|gb|EFX27497.1| colicin uptake protein TolQ [Escherichia coli O55:H7 str. USDA
5905]
gi|320664780|gb|EFX31918.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. LSU-61]
gi|323379460|gb|ADX51728.1| protein TolQ [Escherichia coli KO11]
gi|323942960|gb|EGB39124.1| TolQ protein [Escherichia coli E482]
gi|323963118|gb|EGB58688.1| TolQ protein [Escherichia coli H489]
gi|323967340|gb|EGB62761.1| TolQ protein [Escherichia coli M863]
gi|324020355|gb|EGB89574.1| protein TolQ [Escherichia coli MS 117-3]
gi|324116279|gb|EGC10200.1| TolQ protein [Escherichia coli E1167]
gi|326341514|gb|EGD65304.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1044]
gi|331038036|gb|EGI10256.1| protein TolQ [Escherichia coli H736]
gi|331050023|gb|EGI22081.1| protein TolQ [Escherichia coli M718]
gi|331060519|gb|EGI32483.1| protein TolQ [Escherichia coli TA143]
gi|331065460|gb|EGI37353.1| protein TolQ [Escherichia coli TA271]
gi|331070454|gb|EGI41818.1| protein TolQ [Escherichia coli TA280]
gi|331075912|gb|EGI47209.1| protein TolQ [Escherichia coli H591]
gi|332096457|gb|EGJ01453.1| protein TolQ [Shigella dysenteriae 155-74]
gi|332104766|gb|EGJ08112.1| membrane-spanning inner membrane protein [Shigella sp. D9]
Length = 230
Score = 39.5 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 112 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 171
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 172 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|329961531|ref|ZP_08299612.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
gi|328531743|gb|EGF58572.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
Length = 268
Score = 39.5 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 166 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 225
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I++ +
Sbjct: 226 VALILQVFYNYILSKIEALTSE 247
>gi|187250855|ref|YP_001875337.1| biopolymer transport protein [Elusimicrobium minutum Pei191]
gi|186971015|gb|ACC98000.1| Biopolymer transport protein [Elusimicrobium minutum Pei191]
Length = 209
Score = 39.5 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK--- 186
++ ++ N + +++ DE ID + K ++ +G + P IG+ G +LG+++
Sbjct: 85 IKTLLTSNRQGANLKDYSDEVIDWEVTLLHKKLPVLATLGSTTPFIGLFGTVLGVMRAFA 144
Query: 187 ---AMGNLSQSPKILGTAIGVSLTGTLLGIILS 216
AM + P ++ I +L T G+ ++
Sbjct: 145 DLAAMTAATAGPSVVAKGIAEALINTAAGLFVA 177
>gi|197119872|ref|YP_002140299.1| TolQ-like biopolymer transport membrane proton channel [Geobacter
bemidjiensis Bem]
gi|197089232|gb|ACH40503.1| TolQ-related biopolymer transport membrane proton channel
[Geobacter bemidjiensis Bem]
Length = 224
Score = 39.5 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 46/142 (32%), Gaps = 9/142 (6%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIF----TSIPTVLENNELTTFICDYMRMIIVGNA 138
L + K + +D NS + + + E D +
Sbjct: 45 RFLDFFWKAKRFDAISGQLDRFANSPLTVLFQEGYGELKKLQEKIEEKADPTSISTDLGG 104
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP--- 195
I + + K ++ G + P IG+ G + GI+ A + Q+
Sbjct: 105 ID-NIARALRRATTSEITRLEKYLTFLATTGATAPFIGLFGTVWGIMTAFEKIGQTGSAS 163
Query: 196 -KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 164 LAVVAPGIAEALIATAIGLVAA 185
>gi|300692240|ref|YP_003753235.1| protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum PSI07]
gi|299079300|emb|CBJ51972.1| Protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum PSI07]
Length = 230
Score = 39.5 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 58/202 (28%), Gaps = 28/202 (13%)
Query: 24 NPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY---CDVLK 80
+ L+ +++ GL + I +L + + D+
Sbjct: 11 SIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDLQA 70
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPT--VLENNELTTFICDYMRMIIVGNA 138
+ N E + + T + + + + MR
Sbjct: 71 MYQSAANNRHNTG--ALERIFEAGMREFLKTREQQRGIGDPSAILDASRRAMRAAYQREM 128
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----S 194
S E P+ ++ +G P IG+ G + GI+ A LS +
Sbjct: 129 DSL---------------ESHLPF--LASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQAT 171
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 172 LSAVAPGIAEALVATAIGLFAA 193
>gi|62290541|ref|YP_222334.1| biopolymer transport protein ExbB [Brucella abortus bv. 1 str.
9-941]
gi|189024761|ref|YP_001935529.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225853130|ref|YP_002733363.1| TonB-system energizer ExbB [Brucella melitensis ATCC 23457]
gi|254689838|ref|ZP_05153092.1| tonB-system energizer ExbB [Brucella abortus bv. 6 str. 870]
gi|254697986|ref|ZP_05159814.1| tonB-system energizer ExbB [Brucella abortus bv. 2 str. 86/8/59]
gi|254708464|ref|ZP_05170292.1| tonB-system energizer ExbB [Brucella pinnipedialis M163/99/10]
gi|254708684|ref|ZP_05170495.1| tonB-system energizer ExbB [Brucella pinnipedialis B2/94]
gi|254714531|ref|ZP_05176342.1| tonB-system energizer ExbB [Brucella ceti M644/93/1]
gi|254717429|ref|ZP_05179240.1| tonB-system energizer ExbB [Brucella ceti M13/05/1]
gi|254730872|ref|ZP_05189450.1| tonB-system energizer ExbB [Brucella abortus bv. 4 str. 292]
gi|256030210|ref|ZP_05443824.1| tonB-system energizer ExbB [Brucella pinnipedialis M292/94/1]
gi|256045279|ref|ZP_05448173.1| tonB-system energizer ExbB [Brucella melitensis bv. 1 str. Rev.1]
gi|256061708|ref|ZP_05451845.1| tonB-system energizer ExbB [Brucella neotomae 5K33]
gi|256114238|ref|ZP_05454983.1| tonB-system energizer ExbB [Brucella melitensis bv. 3 str. Ether]
gi|256160384|ref|ZP_05458074.1| tonB-system energizer ExbB [Brucella ceti M490/95/1]
gi|256255592|ref|ZP_05461128.1| tonB-system energizer ExbB [Brucella ceti B1/94]
gi|256258091|ref|ZP_05463627.1| tonB-system energizer ExbB [Brucella abortus bv. 9 str. C68]
gi|260167886|ref|ZP_05754697.1| tonB-system energizer ExbB [Brucella sp. F5/99]
gi|294850922|ref|ZP_06791598.1| biopolymer transporter ExbB [Brucella sp. NVSL 07-0026]
gi|62196673|gb|AAX74973.1| ExbB, biopolymer transport protein ExbB [Brucella abortus bv. 1
str. 9-941]
gi|189020333|gb|ACD73055.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225641495|gb|ACO01409.1| tonB-system energizer ExbB [Brucella melitensis ATCC 23457]
gi|294821565|gb|EFG38561.1| biopolymer transporter ExbB [Brucella sp. NVSL 07-0026]
gi|326409679|gb|ADZ66744.1| MotA/TolQ/ExbB proton channel [Brucella melitensis M28]
Length = 307
Score = 39.5 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 171 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 230
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 231 TTNLAVVAPGIAEALLATAIGLVAA 255
>gi|83593490|ref|YP_427242.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83576404|gb|ABC22955.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 296
Score = 39.5 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KIL 198
IE M ++ L + ++ +G + P +G+ G + GI+ + +++QS ++
Sbjct: 174 IERAMRLTVNAELRKLEVGLPLLASVGSAAPFVGLFGTVWGIMHSFTSIAQSNDTSLAVV 233
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G++ +
Sbjct: 234 APGIAEALFATAIGLVAA 251
>gi|13473333|ref|NP_104900.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Mesorhizobium loti MAFF303099]
gi|14024082|dbj|BAB50686.1| inner membrane protein; TolQ [Mesorhizobium loti MAFF303099]
Length = 236
Score = 39.5 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
I+ MD + + + ++ G + P IG+ G ++GI+ + ++ S +
Sbjct: 114 RIDKAMDLALTREMEKLEGRLGFLATTGSAAPFIGLFGTVIGIMTSFQAIAGSKNTSLAV 173
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 174 VAPGIAEALLATAIGLLAA 192
>gi|254506113|ref|ZP_05118257.1| protein TolQ [Vibrio parahaemolyticus 16]
gi|219550931|gb|EED27912.1| protein TolQ [Vibrio parahaemolyticus 16]
Length = 232
Score = 39.5 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGLFAAIPAV 190
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+++ + K Y + + ++
Sbjct: 191 M-AYNRLSNKVSKLEHNYATFSEEFHSILHRQA 222
>gi|78357197|ref|YP_388646.1| biopolymer transport protein ExbB-like [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78219602|gb|ABB38951.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 208
Score = 39.5 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
+ P +G++G + G+I +SQ + + L + I +L T G++ + +
Sbjct: 113 LAAITPLLGLLGTVSGMISTFNVISQFGTGNARALASGISEALVTTQSGLVAAIPGLL-M 171
Query: 224 TSQIKSTRLKQHRLYIIVKKAL 245
+ + K + + L
Sbjct: 172 AAILARRADKMKKRMEMFCIGL 193
>gi|307246492|ref|ZP_07528564.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306852555|gb|EFM84788.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 222
Score = 39.5 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G P IG+ G + GI A+ ++SQ S + IG +L T +G+ ++
Sbjct: 126 ALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLFVA 182
>gi|306844657|ref|ZP_07477242.1| tonB-system energizer ExbB [Brucella sp. BO1]
gi|306274829|gb|EFM56599.1| tonB-system energizer ExbB [Brucella sp. BO1]
Length = 307
Score = 39.5 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 171 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 230
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 231 TTNLAVVAPGIAEALLATAIGLVAA 255
>gi|27804814|gb|AAO22858.1| adventurous gliding motility protein X [Myxococcus xanthus]
Length = 298
Score = 39.5 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 50/146 (34%), Gaps = 7/146 (4%)
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIF-TSIPTVLENNELTTFICDYMRMII 134
L L + + +T +D S +F + + + +
Sbjct: 117 AQSLTFLDTFWKASRLEAIYQTAQKLDGSPLSKVFCAGYEELTKLAQAKEGGTEGALAER 176
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+G + +E + + E + +G + P +G+ G ++GI+ A +++
Sbjct: 177 LGGIEN--VERALHRASTAQITELENRVSFLGTVGAASPFVGLFGTVIGILSAFNQIAEQ 234
Query: 195 P----KILGTAIGVSLTGTLLGIILS 216
+ +G +L T G+ +
Sbjct: 235 GNATLATVAAPVGNALFATAAGLFAA 260
>gi|126209034|ref|YP_001054259.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
L20]
gi|165977003|ref|YP_001652596.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190150901|ref|YP_001969426.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303253485|ref|ZP_07339627.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248616|ref|ZP_07530630.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307250849|ref|ZP_07532777.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307255476|ref|ZP_07537282.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259928|ref|ZP_07541641.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307262057|ref|ZP_07543711.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307264254|ref|ZP_07545844.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|4127364|emb|CAA76936.1| TolQ protein [Actinobacillus pleuropneumoniae]
gi|28572164|gb|AAM63530.1| ExbB [Actinobacillus suis]
gi|28572170|gb|AAM63534.1| ExbB [Actinobacillus suis]
gi|49532664|dbj|BAD26602.1| cytoplasmic membrane protein [Actinobacillus suis]
gi|55978871|gb|AAV68897.1| ExbB [Haemophilus parasuis]
gi|126097826|gb|ABN74654.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165877104|gb|ABY70152.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189916032|gb|ACE62284.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302647729|gb|EFL77943.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854827|gb|EFM87016.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306857099|gb|EFM89227.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861518|gb|EFM93506.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865956|gb|EFM97831.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306868236|gb|EFN00059.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870425|gb|EFN02179.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 222
Score = 39.5 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G P IG+ G + GI A+ ++SQ S + IG +L T +G+ ++
Sbjct: 126 ALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLFVA 182
>gi|325498080|gb|EGC95939.1| colicin uptake protein TolQ [Escherichia fergusonii ECD227]
Length = 227
Score = 39.5 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 109 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 168
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 169 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|53729226|ref|ZP_00348353.1| COG0811: Biopolymer transport proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307257645|ref|ZP_07539404.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863820|gb|EFM95744.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 164
Score = 39.5 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G P IG+ G + GI A+ ++SQ S + IG +L T +G+ ++
Sbjct: 68 ALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLFVA 124
>gi|254413562|ref|ZP_05027332.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Microcoleus chthonoplastes PCC 7420]
gi|196179669|gb|EDX74663.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Microcoleus chthonoplastes PCC 7420]
Length = 219
Score = 39.5 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-------S 192
M+ D L + K + + P +G++G + G+I NL +
Sbjct: 88 PETFRLAMEAAGDKELIKMRKGEKLLETIVAVAPLLGLLGTVTGLISTFNNLKIGGGGTT 147
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
+ IG +L T G+I++
Sbjct: 148 VEATKVAGGIGEALITTAAGMIVA 171
>gi|165975757|ref|YP_001651350.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|165875858|gb|ABY68906.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
Length = 226
Score = 39.5 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+YMR+ V M+ ++ + + + +G P IG+ G +
Sbjct: 88 FKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVEDLESYIPFLGTVGSISPYIGLFGTV 147
Query: 182 LGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
GI+ + LS + + + I +L T +G+ +
Sbjct: 148 WGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLFAA 186
>gi|26246706|ref|NP_752746.1| colicin uptake protein TolQ [Escherichia coli CFT073]
gi|91209771|ref|YP_539757.1| colicin uptake protein TolQ [Escherichia coli UTI89]
gi|117622928|ref|YP_851841.1| colicin uptake protein TolQ [Escherichia coli APEC O1]
gi|191174066|ref|ZP_03035582.1| protein TolQ [Escherichia coli F11]
gi|215485759|ref|YP_002328190.1| colicin uptake protein TolQ [Escherichia coli O127:H6 str.
E2348/69]
gi|218557650|ref|YP_002390563.1| colicin uptake protein TolQ [Escherichia coli S88]
gi|218688528|ref|YP_002396740.1| colicin uptake protein TolQ [Escherichia coli ED1a]
gi|227884296|ref|ZP_04002101.1| colicin uptake protein TolQ [Escherichia coli 83972]
gi|237707300|ref|ZP_04537781.1| colicin uptake protein TolQ [Escherichia sp. 3_2_53FAA]
gi|300992348|ref|ZP_07179871.1| protein TolQ [Escherichia coli MS 200-1]
gi|300993163|ref|ZP_07180246.1| protein TolQ [Escherichia coli MS 45-1]
gi|301051343|ref|ZP_07198166.1| protein TolQ [Escherichia coli MS 185-1]
gi|306812856|ref|ZP_07447049.1| colicin uptake protein TolQ [Escherichia coli NC101]
gi|331645888|ref|ZP_08346991.1| protein TolQ [Escherichia coli M605]
gi|331656755|ref|ZP_08357717.1| protein TolQ [Escherichia coli TA206]
gi|331682167|ref|ZP_08382789.1| protein TolQ [Escherichia coli H299]
gi|26107105|gb|AAN79289.1|AE016757_193 TolQ protein [Escherichia coli CFT073]
gi|91071345|gb|ABE06226.1| TolQ protein [Escherichia coli UTI89]
gi|115512052|gb|ABJ00127.1| TolQ protein [Escherichia coli APEC O1]
gi|190905674|gb|EDV65297.1| protein TolQ [Escherichia coli F11]
gi|215263831|emb|CAS08169.1| membrane spanning protein TolQ in TolA-TolQ-TolR complex
[Escherichia coli O127:H6 str. E2348/69]
gi|218364419|emb|CAR02099.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli S88]
gi|218426092|emb|CAR06910.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli ED1a]
gi|222032473|emb|CAP75212.1| Protein tolQ [Escherichia coli LF82]
gi|226898510|gb|EEH84769.1| colicin uptake protein TolQ [Escherichia sp. 3_2_53FAA]
gi|227839048|gb|EEJ49514.1| colicin uptake protein TolQ [Escherichia coli 83972]
gi|281177880|dbj|BAI54210.1| TolQ protein [Escherichia coli SE15]
gi|294489766|gb|ADE88522.1| protein TolQ [Escherichia coli IHE3034]
gi|300297005|gb|EFJ53390.1| protein TolQ [Escherichia coli MS 185-1]
gi|300305365|gb|EFJ59885.1| protein TolQ [Escherichia coli MS 200-1]
gi|300406693|gb|EFJ90231.1| protein TolQ [Escherichia coli MS 45-1]
gi|305853619|gb|EFM54058.1| colicin uptake protein TolQ [Escherichia coli NC101]
gi|312945261|gb|ADR26088.1| colicin uptake protein TolQ [Escherichia coli O83:H1 str. NRG 857C]
gi|315287148|gb|EFU46560.1| protein TolQ [Escherichia coli MS 110-3]
gi|315292651|gb|EFU52003.1| protein TolQ [Escherichia coli MS 153-1]
gi|315299260|gb|EFU58512.1| protein TolQ [Escherichia coli MS 16-3]
gi|323953137|gb|EGB49004.1| TolQ protein [Escherichia coli H252]
gi|323958481|gb|EGB54187.1| TolQ protein [Escherichia coli H263]
gi|324009569|gb|EGB78788.1| protein TolQ [Escherichia coli MS 57-2]
gi|324010460|gb|EGB79679.1| protein TolQ [Escherichia coli MS 60-1]
gi|331044640|gb|EGI16767.1| protein TolQ [Escherichia coli M605]
gi|331055003|gb|EGI27012.1| protein TolQ [Escherichia coli TA206]
gi|331080591|gb|EGI51767.1| protein TolQ [Escherichia coli H299]
Length = 230
Score = 39.5 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 112 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 171
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 172 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|300309940|ref|YP_003774032.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300072725|gb|ADJ62124.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 231
Score = 39.5 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-- 194
I + EI+ + + ++ +G + P +G+ G + GI A+ +S S
Sbjct: 105 TDPGELITRTLRREINRVSARLERGLTLLASVGSTAPFVGLFGTVWGIYHALVAVSASGT 164
Query: 195 --PKILGTAIGVSLTGTLLGIILS 216
+ +G +L T LG++++
Sbjct: 165 VQIDKVAGPVGEALIMTALGLLVA 188
>gi|260912910|ref|ZP_05919395.1| TolQ colicin import protein [Pasteurella dagmatis ATCC 43325]
gi|260632900|gb|EEX51066.1| TolQ colicin import protein [Pasteurella dagmatis ATCC 43325]
Length = 229
Score = 39.5 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 24/173 (13%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY--CDVLKLLYILMYNLKKGSRNETENHIDDPYNS 107
+I L A +D + + L LY + N ++ + +E
Sbjct: 32 SWAIIIQRSRVLTRALKDSAAFEDRFWSGEDLNRLYEGLEN-RRDGLSGSEQ-------- 82
Query: 108 TIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH 167
IF E + L D II G+ R+ + M+ E++ + ++
Sbjct: 83 -IF--YVGFKEFSRLKQANPDAPESIIQGSTRAMNL--AMNREVEDLETR----VPFLAT 133
Query: 168 MGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ P IG+ G + GI+ A LS + +++ I +L T +G+ +
Sbjct: 134 VASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGLFAA 186
>gi|255691320|ref|ZP_05414995.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
gi|260622962|gb|EEX45833.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
Length = 267
Score = 39.5 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 224
Query: 215 LS 216
++
Sbjct: 225 VA 226
>gi|32477300|ref|NP_870294.1| tolQ-type transport protein [Rhodopirellula baltica SH 1]
gi|32447851|emb|CAD77369.1| probable tolQ-type transport protein [Rhodopirellula baltica SH 1]
Length = 319
Score = 39.5 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 47/129 (36%), Gaps = 11/129 (8%)
Query: 130 MRMIIVGNARSY-EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ +++ + +IE + + P ++ + P +G++G + G+I A
Sbjct: 157 ISAMLMRTGQPLGDIERTASDALQREADRYAGPVRWLTLAAAATPLMGLLGTVWGMIVAF 216
Query: 189 GNLS------QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
S + L I +L TL G+ ++ P + + +L+ ++
Sbjct: 217 HESSTLTADRSRSEQLSEGIYTALVTTLAGLAVA----IPAAILAQYLENRIAKLFHRIE 272
Query: 243 KALIAYMNG 251
+ G
Sbjct: 273 EMAFVIAPG 281
>gi|292898895|ref|YP_003538264.1| TolQ colicin import protein [Erwinia amylovora ATCC 49946]
gi|291198743|emb|CBJ45852.1| TolQ colicin import protein [Erwinia amylovora ATCC 49946]
Length = 228
Score = 39.5 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|55978881|gb|AAV68902.1| ExbB [Haemophilus parasuis]
Length = 222
Score = 39.5 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G P IG+ G + GI A+ ++SQ S + IG +L T +G+ ++
Sbjct: 126 ALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLFVA 182
>gi|70732086|ref|YP_261842.1| tolQ protein [Pseudomonas fluorescens Pf-5]
gi|68346385|gb|AAY93991.1| tolQ protein [Pseudomonas fluorescens Pf-5]
Length = 231
Score = 39.5 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 50/153 (32%), Gaps = 17/153 (11%)
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSI---------PTVLENNELTTFICDYMR 131
++ NL + R E+ + ++ + + P ++ R
Sbjct: 38 IMIFQRSNLLRAGRRALESFEERFWSGIDLSKLYRQAGSNPDPDSGVEQIFRAGFKEFSR 97
Query: 132 MIIVGNARSYEIEN----LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
+ + M I + + ++ +G P IG+ G + GI+ +
Sbjct: 98 LRQQPGVDPEAVMEGVARAMRVAISREEEKLEQSLPFLATVGSVSPYIGLFGTVWGIMNS 157
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
L+Q + + I +L T +G+ +
Sbjct: 158 FRGLAQAQQATLATVAPGIAEALIATAIGLFAA 190
>gi|15602835|ref|NP_245907.1| hypothetical protein PM0970 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721295|gb|AAK03054.1| TolQ [Pasteurella multocida subsp. multocida str. Pm70]
Length = 229
Score = 39.5 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M+ ++ + E ++ + P IG+ G + GI+ A LS + +++ I
Sbjct: 113 MNLAMNREVEELETRVPFLATVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAIGLFAA 186
>gi|110804637|ref|YP_688157.1| colicin uptake protein TolQ [Shigella flexneri 5 str. 8401]
gi|170020918|ref|YP_001725872.1| colicin uptake protein TolQ [Escherichia coli ATCC 8739]
gi|170768990|ref|ZP_02903443.1| protein TolQ [Escherichia albertii TW07627]
gi|256021188|ref|ZP_05435053.1| colicin uptake protein TolQ [Shigella sp. D9]
gi|293403992|ref|ZP_06647986.1| colicin uptake protein TolQ [Escherichia coli FVEC1412]
gi|293409121|ref|ZP_06652697.1| TolQ protein [Escherichia coli B354]
gi|293414022|ref|ZP_06656671.1| TolQ protein [Escherichia coli B185]
gi|293433005|ref|ZP_06661433.1| TolQ [Escherichia coli B088]
gi|298379772|ref|ZP_06989377.1| biopolymer transporter TolQ [Escherichia coli FVEC1302]
gi|110614185|gb|ABF02852.1| TolQ protein [Shigella flexneri 5 str. 8401]
gi|169755846|gb|ACA78545.1| protein TolQ [Escherichia coli ATCC 8739]
gi|170122062|gb|EDS90993.1| protein TolQ [Escherichia albertii TW07627]
gi|291323824|gb|EFE63246.1| TolQ [Escherichia coli B088]
gi|291428578|gb|EFF01603.1| colicin uptake protein TolQ [Escherichia coli FVEC1412]
gi|291434080|gb|EFF07053.1| TolQ protein [Escherichia coli B185]
gi|291469589|gb|EFF12073.1| TolQ protein [Escherichia coli B354]
gi|298279470|gb|EFI20978.1| biopolymer transporter TolQ [Escherichia coli FVEC1302]
gi|315135394|dbj|BAJ42553.1| inner membrane protein [Escherichia coli DH1]
gi|323153747|gb|EFZ39994.1| protein TolQ [Escherichia coli EPECa14]
gi|323938276|gb|EGB34534.1| TolQ protein [Escherichia coli E1520]
gi|323946997|gb|EGB43011.1| TolQ protein [Escherichia coli H120]
gi|323972023|gb|EGB67243.1| TolQ protein [Escherichia coli TA007]
gi|323976282|gb|EGB71372.1| TolQ protein [Escherichia coli TW10509]
gi|326345733|gb|EGD69472.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1125]
gi|327254426|gb|EGE66048.1| protein TolQ [Escherichia coli STEC_7v]
gi|332097657|gb|EGJ02632.1| protein TolQ [Shigella boydii 3594-74]
gi|332342074|gb|AEE55408.1| colicin uptake protein TolQ [Escherichia coli UMNK88]
gi|332763943|gb|EGJ94181.1| protein TolQ [Shigella flexneri K-671]
gi|333007352|gb|EGK26832.1| protein TolQ [Shigella flexneri VA-6]
Length = 227
Score = 39.5 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 109 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 168
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 169 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|329907985|ref|ZP_08274763.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327546839|gb|EGF31765.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 233
Score = 39.5 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ E+D + ++ +G P +G+ G + GI+ A L+ + +
Sbjct: 123 MRAAYQREMDALESHL----SFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLSAV 178
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 179 APGIAEALVATAIGLFAA 196
>gi|153008585|ref|YP_001369800.1| TonB-system energizer ExbB type-1 [Ochrobactrum anthropi ATCC
49188]
gi|151560473|gb|ABS13971.1| TonB-system energizer ExbB type-1 [Ochrobactrum anthropi ATCC
49188]
Length = 338
Score = 39.5 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+SQ
Sbjct: 202 GEGLKERVSSRLSRIEAKAGRRLSKGTGILATIGSVAPFVGLFGTVWGIMNSFINISQAQ 261
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 262 TTNLAVVAPGIAEALLATAIGLVAA 286
>gi|134095826|ref|YP_001100901.1| biopolymer transport ExbB protein [Herminiimonas arsenicoxydans]
gi|133739729|emb|CAL62780.1| Putative biopolymer transport ExbB protein [Herminiimonas
arsenicoxydans]
Length = 230
Score = 39.5 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
I + +EI+ + ++ +G + P IG+ G + GI A+ +S S
Sbjct: 106 NTDPGELITRTLRQEINRVSSRLENGLTLLASVGSTAPFIGLFGTVWGIYHALVAVSASG 165
Query: 195 ---PKILGTAIGVSLTGTLLGIILS 216
+ +G +L T LG+ ++
Sbjct: 166 TVQIDKVAGPVGEALIMTALGLAVA 190
>gi|153003166|ref|YP_001377491.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152026739|gb|ABS24507.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 255
Score = 39.5 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLG 212
+ + +++ +G + P +G++G + GIIKA N++ + + AI +L T G
Sbjct: 151 DLRRGLGSLATIGSTAPFVGLLGTVWGIIKAFQNMAATGSGGLGTVSGAIAEALINTAFG 210
Query: 213 IILS 216
++++
Sbjct: 211 LLVA 214
>gi|323163896|gb|EFZ49706.1| protein TolQ [Shigella sonnei 53G]
gi|323170858|gb|EFZ56508.1| protein TolQ [Escherichia coli LT-68]
gi|332768164|gb|EGJ98349.1| protein TolQ [Shigella flexneri 2930-71]
Length = 222
Score = 39.5 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 104 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 163
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 164 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 213
>gi|302189466|ref|ZP_07266139.1| tolQ protein [Pseudomonas syringae pv. syringae 642]
Length = 236
Score = 39.5 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I + K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 112 VERSLQVAISEQELQLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|108763356|ref|YP_628556.1| TonB system transport protein ExbB/TolQ [Myxococcus xanthus DK
1622]
gi|108467236|gb|ABF92421.1| tonB system transport protein ExbB/TolQ [Myxococcus xanthus DK
1622]
Length = 250
Score = 39.5 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK-- 196
+ + + + + ++ +G P +G++G ++GII+A +++
Sbjct: 103 PVELTRRELVRINERVSADVRRGMSVLATVGSVAPFVGLLGTVVGIIEAFSGIAKEGSGG 162
Query: 197 --ILGTAIGVSLTGTLLGIILS 216
+ I +L T LG++++
Sbjct: 163 LGAVSAGIAEALVVTALGLLVA 184
>gi|110640945|ref|YP_668673.1| colicin uptake protein TolQ [Escherichia coli 536]
gi|312965173|ref|ZP_07779410.1| protein TolQ [Escherichia coli 2362-75]
gi|110342537|gb|ABG68774.1| TolQ protein [Escherichia coli 536]
gi|307552588|gb|ADN45363.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli ABU 83972]
gi|307627849|gb|ADN72153.1| colicin uptake protein TolQ [Escherichia coli UM146]
gi|312290264|gb|EFR18147.1| protein TolQ [Escherichia coli 2362-75]
gi|320194084|gb|EFW68716.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
WV_060327]
gi|330910488|gb|EGH38998.1| motA/TolQ/ExbB proton channel family protein [Escherichia coli
AA86]
Length = 227
Score = 39.5 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 109 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 168
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 169 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|289661904|ref|ZP_06483485.1| TolQ protein [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289666995|ref|ZP_06488070.1| TolQ protein [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 259
Score = 39.5 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ S + I +L T +G+ ++
Sbjct: 163 LANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVA 219
>gi|160889237|ref|ZP_02070240.1| hypothetical protein BACUNI_01658 [Bacteroides uniformis ATCC 8492]
gi|156861244|gb|EDO54675.1| hypothetical protein BACUNI_01658 [Bacteroides uniformis ATCC 8492]
Length = 267
Score = 39.5 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 224
Query: 215 LS 216
++
Sbjct: 225 VA 226
>gi|160882690|ref|ZP_02063693.1| hypothetical protein BACOVA_00648 [Bacteroides ovatus ATCC 8483]
gi|156111860|gb|EDO13605.1| hypothetical protein BACOVA_00648 [Bacteroides ovatus ATCC 8483]
Length = 266
Score = 39.5 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 164 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 223
Query: 215 LS 216
++
Sbjct: 224 VA 225
>gi|49476130|ref|YP_034171.1| biopolymer transport exbB protein [Bartonella henselae str.
Houston-1]
gi|49238938|emb|CAF28234.1| Biopolymer transport exbB protein [Bartonella henselae str.
Houston-1]
Length = 280
Score = 39.5 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
V + +L+ + ++ +G P +G+ + GI+ + ++QS
Sbjct: 148 VNEGLKERVHSLLSRCLLAATRRVACGSAVLATIGAIAPFVGLFATVWGIMNSFIGIAQS 207
Query: 195 P----KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ ++
Sbjct: 208 QTTRLDVVAPGIAEALLATAIGLFVA 233
>gi|114330313|ref|YP_746535.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
gi|114307327|gb|ABI58570.1| Cell division and transport-associated protein TolQ [Nitrosomonas
eutropha C91]
Length = 234
Score = 39.5 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ + E+D + ++ +G P +G+ G + GI+ A LS + +
Sbjct: 115 MRAVYQREMDRLESHL----SFLATVGSVSPYVGLFGTVWGIMNAFRELSNVGQATIAHV 170
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 APGIAEALIATAMGLFAA 188
>gi|239995976|ref|ZP_04716500.1| tolQ protein [Alteromonas macleodii ATCC 27126]
Length = 229
Score = 39.1 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E ++ G P IG+ G + GI+ A L + + ++ I
Sbjct: 111 MRVSMSRQVEELESRLPFLATAGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGI 170
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 171 AEALIATAIGLFAA 184
>gi|89889420|ref|ZP_01200931.1| MotA/TolQ/ExbB family proton channel [Flavobacteria bacterium
BBFL7]
gi|89517693|gb|EAS20349.1| MotA/TolQ/ExbB family proton channel [Flavobacteria bacterium
BBFL7]
Length = 263
Score = 39.1 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLG 212
+ K +S P +G +G +LG+I A N+ P ++ I V+L T+ G
Sbjct: 160 QLEKNVSWVSLFIALAPMLGFMGTVLGMIDAFDNIQSAGAMEPALVAGGIKVALLTTVFG 219
Query: 213 IILS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+I++ N + ++I S I + L+ Y NG
Sbjct: 220 LIVAIILQIFYNYIVAKIDSIVNDMEDASITLIDILVDYKNGK 262
>gi|325140812|gb|EGC63322.1| biopolymer transport protein ExbB [Neisseria meningitidis CU385]
Length = 220
Score = 39.1 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 126 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 182
>gi|209522409|ref|ZP_03271017.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209497152|gb|EDZ97399.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 256
Score = 39.1 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
+ L +E T + + S I + + +D + ++ +G +
Sbjct: 82 LALALAGHEAATHHRQTQQHLHDRIDVSDWITRRLQDTMDETIARLQSGLAILASIGSTA 141
Query: 173 PAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
P +G+ G + GI A+ + + S + +G SL T G+ ++
Sbjct: 142 PFVGLFGTVWGIYHALIVIGETGQTSIDHVAGPVGESLIMTAFGLFVA 189
>gi|163796014|ref|ZP_02189977.1| MotA/TolQ/ExbB proton channel [alpha proteobacterium BAL199]
gi|159178769|gb|EDP63307.1| MotA/TolQ/ExbB proton channel [alpha proteobacterium BAL199]
Length = 255
Score = 39.1 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTL 210
+ + + + P +G+ G +LG+I+A L Q P IL I +L T
Sbjct: 128 EDLRMYFRPLEVIASVAPLLGLFGTVLGMIEAFRQLEQAGSQVDPSILSGGIWEALLTTA 187
Query: 211 LGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
+G+ ++ + L ++ + V
Sbjct: 188 VGLAVAIPVVGILAW-LERIVDRLTHEMENVV 218
>gi|119504700|ref|ZP_01626778.1| Possible biopolymer transport protein, ExbB family protein [marine
gamma proteobacterium HTCC2080]
gi|119459305|gb|EAW40402.1| Possible biopolymer transport protein, ExbB family protein [marine
gamma proteobacterium HTCC2080]
Length = 250
Score = 39.1 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 98 ENHIDDPYNSTIFT---SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDII 154
+ +D +S++ + +P +++ L + I +R + + ++ +D +
Sbjct: 89 DEDMDRQASSSLLSSIEKLPLEIKSTPLVSVISAALRRFALTG-DVHSSAGAIEPALDAL 147
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG----NLSQSPKILGTAIGVSLTGTL 210
+ + ++ ++P+IG +G + GI +AM + + + +++GV+ T
Sbjct: 148 AVQNDGRLTILRYITWAIPSIGFIGTVRGIGQAMSQAELAVDGNIGPMTSSLGVAFNSTF 207
Query: 211 LGIILSYSLCNPLTSQIKSTRLKQHRLYI-------IVKKALIA 247
+ +++S + + R + + I I+K+ ++A
Sbjct: 208 VALLIS--VFIMFAVSMLQRRQDEQLVNIQQYVEDYIIKRVVLA 249
>gi|15677575|ref|NP_274732.1| biopolymer transport protein [Neisseria meningitidis MC58]
gi|121635363|ref|YP_975608.1| biopolymer transport protein [Neisseria meningitidis FAM18]
gi|218768741|ref|YP_002343253.1| biopolymer transport protein [Neisseria meningitidis Z2491]
gi|254805477|ref|YP_003083698.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha14]
gi|54037072|sp|P64100|EXBB_NEIMB RecName: Full=Biopolymer transport protein exbB
gi|54040986|sp|P64099|EXBB_NEIMA RecName: Full=Biopolymer transport protein exbB
gi|7226984|gb|AAF42074.1| biopolymer transport protein ExbB [Neisseria meningitidis MC58]
gi|120867069|emb|CAM10834.1| biopolymer transport protein [Neisseria meningitidis FAM18]
gi|121052749|emb|CAM09093.1| biopolymer transport protein [Neisseria meningitidis Z2491]
gi|254669019|emb|CBA07428.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha14]
gi|254671783|emb|CBA09642.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha153]
gi|254672764|emb|CBA06802.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha275]
gi|261392051|emb|CAX49543.1| biopolymer transport ExbB protein [Neisseria meningitidis 8013]
gi|308389847|gb|ADO32167.1| biopolymer transport protein [Neisseria meningitidis alpha710]
gi|316985741|gb|EFV64686.1| motA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis H44/76]
gi|319410977|emb|CBY91373.1| biopolymer transport ExbB protein [Neisseria meningitidis WUE 2594]
gi|325128734|gb|EGC51597.1| biopolymer transport protein ExbB [Neisseria meningitidis N1568]
gi|325132784|gb|EGC55464.1| biopolymer transport protein ExbB [Neisseria meningitidis M6190]
gi|325133615|gb|EGC56273.1| biopolymer transport protein ExbB [Neisseria meningitidis M13399]
gi|325135669|gb|EGC58283.1| biopolymer transport protein ExbB [Neisseria meningitidis M0579]
gi|325138866|gb|EGC61417.1| biopolymer transport protein ExbB [Neisseria meningitidis ES14902]
gi|325145083|gb|EGC67366.1| biopolymer transport protein ExbB [Neisseria meningitidis
M01-240013]
gi|325198820|gb|ADY94276.1| biopolymer transport protein ExbB [Neisseria meningitidis G2136]
gi|325199682|gb|ADY95137.1| biopolymer transport protein ExbB [Neisseria meningitidis H44/76]
gi|325201621|gb|ADY97075.1| biopolymer transport protein ExbB [Neisseria meningitidis
M01-240149]
gi|325204684|gb|ADZ00138.1| biopolymer transport protein ExbB [Neisseria meningitidis
M01-240355]
gi|325205561|gb|ADZ01014.1| biopolymer transport protein ExbB [Neisseria meningitidis
M04-240196]
gi|325208644|gb|ADZ04096.1| biopolymer transport protein ExbB [Neisseria meningitidis NZ-05/33]
Length = 220
Score = 39.1 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 126 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 182
>gi|329957779|ref|ZP_08298254.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
gi|328522656|gb|EGF49765.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
Length = 270
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 168 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 227
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I++ +
Sbjct: 228 VALILQVFYNYILSKIEALTSE 249
>gi|292487658|ref|YP_003530531.1| protein TolQ [Erwinia amylovora CFBP1430]
gi|291553078|emb|CBA20123.1| Protein tolQ [Erwinia amylovora CFBP1430]
gi|312171766|emb|CBX80024.1| Protein tolQ [Erwinia amylovora ATCC BAA-2158]
Length = 225
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|261214638|ref|ZP_05928919.1| biopolymer transporter ExbD [Brucella abortus bv. 3 str. Tulya]
gi|260916245|gb|EEX83106.1| biopolymer transporter ExbD [Brucella abortus bv. 3 str. Tulya]
Length = 319
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 183 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 242
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 243 TTNLAVVAPGIAEALLATAIGLVAA 267
>gi|254719671|ref|ZP_05181482.1| tonB-system energizer ExbB [Brucella sp. 83/13]
gi|306840053|ref|ZP_07472840.1| tonB-system energizer ExbB [Brucella sp. NF 2653]
gi|306404867|gb|EFM61159.1| tonB-system energizer ExbB [Brucella sp. NF 2653]
Length = 307
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 171 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 230
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 231 TTNLAVVAPGIAEALLATAIGLVAA 255
>gi|229592298|ref|YP_002874417.1| TolQ protein [Pseudomonas fluorescens SBW25]
gi|229364164|emb|CAY51814.1| TolQ protein [Pseudomonas fluorescens SBW25]
Length = 231
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 50/153 (32%), Gaps = 17/153 (11%)
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSI---------PTVLENNELTTFICDYMR 131
++ NL + R E+ + ++ + + P ++ R
Sbjct: 38 VMIFQRSNLLRAGRRALESFEERFWSGIDLSKLYRQAGSNPDPDSGVEQIFRAGFKEFSR 97
Query: 132 MIIVGNARSYEIEN----LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
+ + M I + + ++ +G P IG+ G + GI+ +
Sbjct: 98 LRQQPGVDPEAVMEGVARAMRVAISREEEKLEQSLPFLATVGSVSPYIGLFGTVWGIMNS 157
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
L+Q + + I +L T +G+ +
Sbjct: 158 FRGLAQAQQATLATVAPGIAEALIATAIGLFAA 190
>gi|167764758|ref|ZP_02436879.1| hypothetical protein BACSTE_03148 [Bacteroides stercoris ATCC
43183]
gi|167697427|gb|EDS14006.1| hypothetical protein BACSTE_03148 [Bacteroides stercoris ATCC
43183]
Length = 269
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 167 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 226
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I++ +
Sbjct: 227 VALILQVFYNYILSKIEALTSE 248
>gi|21243871|ref|NP_643453.1| TolQ protein [Xanthomonas axonopodis pv. citri str. 306]
gi|294626859|ref|ZP_06705451.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294665408|ref|ZP_06730696.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|21109472|gb|AAM37989.1| TolQ protein [Xanthomonas axonopodis pv. citri str. 306]
gi|292598873|gb|EFF43018.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292604819|gb|EFF48182.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 259
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ S + I +L T +G+ ++
Sbjct: 163 LANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVA 219
>gi|261750827|ref|ZP_05994536.1| biopolymer transporter ExbB [Brucella suis bv. 5 str. 513]
gi|261740580|gb|EEY28506.1| biopolymer transporter ExbB [Brucella suis bv. 5 str. 513]
Length = 319
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ + + K ++ +G P +G+ G + GI+ + N+S+ +
Sbjct: 188 ERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLA 247
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 248 VVAPGIAEALLATAIGLVAA 267
>gi|218128737|ref|ZP_03457541.1| hypothetical protein BACEGG_00309 [Bacteroides eggerthii DSM 20697]
gi|317475478|ref|ZP_07934741.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
gi|217989192|gb|EEC55507.1| hypothetical protein BACEGG_00309 [Bacteroides eggerthii DSM 20697]
gi|316908309|gb|EFV30000.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
Length = 270
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 168 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 227
Query: 215 LS---YSLCNPLTSQIKSTRLK 233
++ N + S+I++ +
Sbjct: 228 VALILQVFYNYILSKIEALTSE 249
>gi|188577431|ref|YP_001914360.1| protein TolQ [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521883|gb|ACD59828.1| protein TolQ [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 259
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ S + I +L T +G+ ++
Sbjct: 163 LANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVA 219
>gi|58581288|ref|YP_200304.1| hypothetical protein XOO1665 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84623206|ref|YP_450578.1| TolQ protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58425882|gb|AAW74919.1| TolQ protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367146|dbj|BAE68304.1| TolQ protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 259
Score = 39.1 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ S + I +L T +G+ ++
Sbjct: 163 LANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVA 219
>gi|259416881|ref|ZP_05740801.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
gi|259348320|gb|EEW60097.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
Length = 226
Score = 39.1 bits (90), Expect = 0.68, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILG 199
+ D E +++ + + + P IG+ G +LG+I+A L S P +L
Sbjct: 105 DRCDAEAEVLFLRLETGLGFLDLVAQLAPLIGLFGTVLGMIEAFQGLQAAGTSVDPTVLA 164
Query: 200 TAIGVSLTGTLLGIILS 216
I V+L T G+ ++
Sbjct: 165 GGIWVALLTTAAGLAVA 181
>gi|261856318|ref|YP_003263601.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
gi|261836787|gb|ACX96554.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
Length = 207
Score = 39.1 bits (90), Expect = 0.68, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----- 193
+ + N +++ + ++ + + + + P +G++G ++GII +++
Sbjct: 83 SAEAMRNRIEDAGRHVAHQMERYLNTLGTIAVISPLLGLLGTVVGIIDVFQSITASGGAA 142
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+P++L I +L T GI+++
Sbjct: 143 GINPELLAGGISKALVTTAGGIMVA 167
>gi|298292997|ref|YP_003694936.1| protein TolQ [Starkeya novella DSM 506]
gi|296929508|gb|ADH90317.1| protein TolQ [Starkeya novella DSM 506]
Length = 280
Score = 39.1 bits (90), Expect = 0.68, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
++ +MD I + ++ +G + P IG+ G + GI+ + ++ + S
Sbjct: 161 QRLDKVMDVTIAREVERLESRLLVLATVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLA 220
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 221 VVAPGIAEALFATAIGLIAA 240
>gi|166712986|ref|ZP_02244193.1| TolQ [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 259
Score = 39.1 bits (90), Expect = 0.68, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ S + I +L T +G+ ++
Sbjct: 163 LANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVA 219
>gi|317486274|ref|ZP_07945106.1| TolQ protein [Bilophila wadsworthia 3_1_6]
gi|316922444|gb|EFV43698.1| TolQ protein [Bilophila wadsworthia 3_1_6]
Length = 230
Score = 39.1 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
R GN+ ++N+ + + +D+ + ++ + P IG+ G + GI+
Sbjct: 89 RSKEAGNSEDVVVDNVRRALRQGVDMEMTRLTSSLSFLATSANTAPFIGLFGTVWGIMNT 148
Query: 188 MGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ S S + I +L T +G++++
Sbjct: 149 FHAIGAMKSASLATVAPGISEALIATAMGLLVA 181
>gi|308275036|emb|CBX31635.1| hypothetical protein N47_E51470 [uncultured Desulfobacterium sp.]
Length = 600
Score = 39.1 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLGIILS 216
P G++G + G++ +S++ + + + +L T+ G+I++
Sbjct: 514 GGPFFGLLGTVWGVMNTFAAMSEAGEANIMAIAPGVASALATTVFGLIVA 563
>gi|298385077|ref|ZP_06994636.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
gi|298262221|gb|EFI05086.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
Length = 258
Score = 39.1 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 156 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 215
Query: 215 LS 216
++
Sbjct: 216 VA 217
>gi|270295971|ref|ZP_06202171.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273375|gb|EFA19237.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 267
Score = 39.1 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 224
Query: 215 LS 216
++
Sbjct: 225 VA 226
>gi|254785766|ref|YP_003073195.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
gi|237684969|gb|ACR12233.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
Length = 205
Score = 39.1 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
NA+ IE+ M+E I ++ + + H ++ + +G++G I+G+I+A +
Sbjct: 85 NNAKRELIESAMEEGIMEVVPQLEERTHYLATLANIATLLGLLGTIIGLIQAFTAVASAD 144
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
++ +L +I V++ T G+ + L
Sbjct: 145 PAEKADMLSASISVAMNTTAFGLCAAIPLIL 175
>gi|88800182|ref|ZP_01115750.1| TolQ protein [Reinekea sp. MED297]
gi|88777028|gb|EAR08235.1| TolQ protein [Reinekea sp. MED297]
Length = 213
Score = 39.1 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
++ +G + P IG+ G + GI+ + L+ S + I +L T +G+ +
Sbjct: 110 MATVGSTSPYIGLFGTVWGIMHSFLGLATVTQVSLSTVAPGIAEALIATAMGLFAAIPAV 169
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIE 259
++ + K + + A ++ +A +
Sbjct: 170 I-AYNRFSARSDKILTGMEMFAEEFSAILHRQAHLLATQ 207
>gi|319760467|ref|YP_004124405.1| protein TolQ [Candidatus Blochmannia vafer str. BVAF]
gi|318039181|gb|ADV33731.1| protein TolQ [Candidatus Blochmannia vafer str. BVAF]
Length = 256
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS---------PK 196
+M ++I L K I +G P IG+ G +LGII L + +
Sbjct: 108 VMHNIMNIELEMLEKNVPLIGIIGSISPYIGLFGTVLGIIHVFLELGKITTEHTGGTHIQ 167
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ + +L T +G+ ++
Sbjct: 168 LIAPGVAEALISTAIGLFVA 187
>gi|283479099|emb|CAY75015.1| Protein tolQ [Erwinia pyrifoliae DSM 12163]
Length = 228
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|163750977|ref|ZP_02158209.1| hypothetical protein KT99_07558 [Shewanella benthica KT99]
gi|161329267|gb|EDQ00265.1| hypothetical protein KT99_07558 [Shewanella benthica KT99]
Length = 464
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
IV A ++ + + + + + I+ + P +G++G + G+I+ +L++
Sbjct: 336 IVAGASVEAMDQRLKQLMLQQMMKFEFGLGFIALLAAMAPMLGLLGTVSGMIETFQSLTE 395
Query: 194 ----SPKILGTAIGVSLTGTLLG 212
PK+L I +L T G
Sbjct: 396 FGNSDPKLLSQGISKALITTQAG 418
>gi|126660064|ref|ZP_01731185.1| hypothetical protein CY0110_12267 [Cyanothece sp. CCY0110]
gi|126618661|gb|EAZ89409.1| hypothetical protein CY0110_12267 [Cyanothece sp. CCY0110]
Length = 234
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 7/85 (8%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS------ 192
M+ D + K + + P +G++G + G+I NL
Sbjct: 87 SPETFRLAMEARGDREFIQMRKGDKFLETVIAVAPLLGLLGTVTGLITTFNNLKIGEGAN 146
Query: 193 -QSPKILGTAIGVSLTGTLLGIILS 216
I +L T G+I++
Sbjct: 147 LAETSQAAAGISEALITTAAGMIVA 171
>gi|330998277|ref|ZP_08322102.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Paraprevotella xylaniphila YIT 11841]
gi|329568666|gb|EGG50467.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Paraprevotella xylaniphila YIT 11841]
Length = 282
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + SP ++ + V+L T+ GII
Sbjct: 182 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQAAGDISPTVVAGGMKVALITTIFGII 241
Query: 215 LS 216
++
Sbjct: 242 VA 243
>gi|295096557|emb|CBK85647.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 227
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 109 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 168
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 169 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|317047354|ref|YP_004115002.1| protein TolQ [Pantoea sp. At-9b]
gi|316948971|gb|ADU68446.1| protein TolQ [Pantoea sp. At-9b]
Length = 228
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|119896905|ref|YP_932118.1| biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119669318|emb|CAL93231.1| probable biopolymer transport protein ExbB [Azoarcus sp. BH72]
Length = 253
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP-- 195
I + + I + ++ +G + P +G+ G + GI A+ N+S S
Sbjct: 108 DADEFITRALRKSISLSTARLEAGLTMLASIGSTAPFVGLFGTVWGIYHALVNISASGMA 167
Query: 196 --KILGTAIGVSLTGTLLGIILS 216
+ +G +L T G+ ++
Sbjct: 168 TLDKVAGPVGEALIMTAFGLFVA 190
>gi|74316730|ref|YP_314470.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
gi|74056225|gb|AAZ96665.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
Length = 250
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
R+I G+ + + I+ + ++ + S P +G+ G + GI A+
Sbjct: 102 GQRLIESGSEDEFLTRA-LRRAINQDTARLEYGHTMLASIASSAPFVGLFGTVWGIYHAL 160
Query: 189 GNL----SQSPKILGTAIGVSLTGTLLGIILS 216
N+ S S + +G +L T LG+ ++
Sbjct: 161 VNIGMSGSGSLDQVAGPVGEALIMTALGLAVA 192
>gi|89899953|ref|YP_522424.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89901448|ref|YP_523919.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89344690|gb|ABD68893.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89346185|gb|ABD70388.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 230
Score = 39.1 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P +G+ G + GI+ A L+ + + I +L T +G+ +
Sbjct: 131 LASVGSVSPYLGLFGTVWGIMHAFTGLASMQTVTLATVAPGIAEALVATAIGLFAA 186
>gi|34496006|ref|NP_900221.1| tolQ-related transport transmembrane protein [Chromobacterium
violaceum ATCC 12472]
gi|34101859|gb|AAQ58227.1| tolQ-related transport transmembrane protein [Chromobacterium
violaceum ATCC 12472]
Length = 222
Score = 39.1 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A +GN Q + + I +L T +G+ +
Sbjct: 129 LATVGSVSPYIGLFGTVWGIMHAFIGLGNAGQATLSTVAPGIAEALVATAIGLFAA 184
>gi|226942654|ref|YP_002797727.1| TolQ-like protein [Azotobacter vinelandii DJ]
gi|226717581|gb|ACO76752.1| TolQ-like protein [Azotobacter vinelandii DJ]
Length = 234
Score = 39.1 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+E + I K ++ +G P IG+ G + GI+ + LSQ + +
Sbjct: 111 VERSLLVAISEEEERLGKGLALLASIGSVSPYIGLFGTVWGIMNSFIGLSQVRQATLSTV 170
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 APGIAEALIATAIGLFAA 188
>gi|319899357|ref|YP_004159454.1| biopolymer transport exbB protein [Bartonella clarridgeiae 73]
gi|319403325|emb|CBI76884.1| Biopolymer transport exbB protein [Bartonella clarridgeiae 73]
Length = 273
Score = 39.1 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 51/146 (34%), Gaps = 6/146 (4%)
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIV 135
L L +K + E + + S+ NN+ F D +
Sbjct: 75 AQTLAGLAASFKEIKGTAVFLLEETLKEIRLSSQLVKSDD-SNNNQCEAFSYDIFSCGSI 133
Query: 136 G-NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
N + +L+ + + ++ +G P +G+ + GI+ + +++S
Sbjct: 134 SINGVKERVHSLLSRCLLAAMRRIACGTAILATIGSVAPFVGLFATVWGIMNSFIGIAKS 193
Query: 195 P----KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ ++
Sbjct: 194 QTTRLDVVAPGIAEALLATAIGLFVA 219
>gi|304395716|ref|ZP_07377599.1| protein TolQ [Pantoea sp. aB]
gi|304357010|gb|EFM21374.1| protein TolQ [Pantoea sp. aB]
Length = 228
Score = 39.1 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 104 VIDGASRAMRIS--MNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + A
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQGYDNFMEEFTAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|298529982|ref|ZP_07017384.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509356|gb|EFI33260.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 234
Score = 39.1 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 60/180 (33%), Gaps = 12/180 (6%)
Query: 43 GGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKK--GSRNETENH 100
++ + V+ VS I YK + + + L + + +
Sbjct: 17 ASLLIQFIMLVLLVMSVSSWTIIIYKFISYRRFTENLGNQLQIFDRASDLAEAMKKVRQD 76
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
D P F+++ + + + R+ + ++ + + L +
Sbjct: 77 ADSPLYRIGFSALKEIQKLEQSQLSSSVKFRIAEDN------VRRVLRQGVSTHLKKLAS 130
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ S IG++G + GI+ A + S + I +L T G++++
Sbjct: 131 SLPFLAICANSSLLIGLLGTVWGIMNAFHAIGVQRGASLATVAPGISEALITTAFGLVVA 190
>gi|78048831|ref|YP_365006.1| biopolymer transport TolQ protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929360|ref|ZP_08190490.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas perforans 91-118]
gi|78037261|emb|CAJ25006.1| biopolymer transport TolQ protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540272|gb|EGD11884.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas perforans 91-118]
Length = 259
Score = 39.1 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ S + I +L T +G+ ++
Sbjct: 163 LANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVA 219
>gi|50123219|ref|YP_052386.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
gi|49613745|emb|CAG77196.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
Length = 240
Score = 39.1 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+E + ++I ++ +G + P IG+ G + GI+ A+ + S S
Sbjct: 98 PDRVERALQQQIQRERRSLEGGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASL 157
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 158 DTVAGPIGNALIATGVGIAVA 178
>gi|319406259|emb|CBI79896.1| tolQ protein [Bartonella sp. AR 15-3]
Length = 237
Score = 39.1 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIK 186
+ + G+ S +++ +D+ +D+ L + + ++ +G + P IG+ G ++GI+
Sbjct: 98 KSLSKGSPTSLNLQSRIDKAMDLTLGRESVKIESRLGFLATLGSAGPFIGLFGTVVGIMN 157
Query: 187 AMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
+ ++S S I+ I +L T +G+ +
Sbjct: 158 SFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
>gi|153808873|ref|ZP_01961541.1| hypothetical protein BACCAC_03174 [Bacteroides caccae ATCC 43185]
gi|149128699|gb|EDM19917.1| hypothetical protein BACCAC_03174 [Bacteroides caccae ATCC 43185]
Length = 266
Score = 39.1 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 164 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 223
Query: 215 LS 216
++
Sbjct: 224 VA 225
>gi|333029213|ref|ZP_08457274.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
gi|332739810|gb|EGJ70292.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
Length = 268
Score = 39.1 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G +LG++ A + Q SP ++ + V+L T+ G+I
Sbjct: 166 EKGCSWITLFIAMAPSLGFLGTVLGMVMAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 225
Query: 215 LS 216
++
Sbjct: 226 VA 227
>gi|325917787|ref|ZP_08179971.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas vesicatoria ATCC 35937]
gi|325536003|gb|EGD07815.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas vesicatoria ATCC 35937]
Length = 259
Score = 39.1 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ S + I +L T +G+ ++
Sbjct: 163 LANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVA 219
>gi|237720120|ref|ZP_04550601.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|260174035|ref|ZP_05760447.1| putative biopolymer transport protein [Bacteroides sp. D2]
gi|293373958|ref|ZP_06620300.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|299147998|ref|ZP_07041061.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|315922304|ref|ZP_07918544.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|229450672|gb|EEO56463.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292631179|gb|EFF49815.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|298514181|gb|EFI38067.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|313696179|gb|EFS33014.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 266
Score = 39.1 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 164 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 223
Query: 215 LS 216
++
Sbjct: 224 VA 225
>gi|317485475|ref|ZP_07944353.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
gi|316923304|gb|EFV44512.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
Length = 189
Score = 39.1 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKIL 198
E + + + + + + + P +G+ G + G+I + + P +L
Sbjct: 73 EETLSLTANRQVRKLERGLGVLELITTIAPILGLTGTVTGMISTFQAIGEHGSRVDPSVL 132
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T G++++
Sbjct: 133 AGGIWEALITTAAGLLVA 150
>gi|308186080|ref|YP_003930211.1| Protein tolQ [Pantoea vagans C9-1]
gi|308056590|gb|ADO08762.1| Protein tolQ [Pantoea vagans C9-1]
Length = 225
Score = 39.1 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+I G +R+ I M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 101 VIDGASRAMRIS--MNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 154
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + A
Sbjct: 155 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQGYDNFMEEFTAI 213
Query: 249 MNGAI 253
++
Sbjct: 214 LHRQA 218
>gi|295701103|ref|YP_003608996.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295440316|gb|ADG19485.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 256
Score = 39.1 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
+ L +E T + + S I + + +D + ++ +G +
Sbjct: 82 LALALAGHEAATHHRQTQQQLHDRIDVSDWITRRLQDTMDETIARLQSGLAILASIGSTA 141
Query: 173 PAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
P +G+ G + GI A+ + + S + +G SL T G+ ++
Sbjct: 142 PFVGLFGTVWGIYHALIVIGETGQTSIDHVAGPVGESLIMTAFGLFVA 189
>gi|288940616|ref|YP_003442856.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288895988|gb|ADC61824.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 220
Score = 39.1 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQS---PKILGTAIGVSLTGTLLGIILSYSLC 220
+ P +G++G I+G+ A L++ P + + +L T G++++
Sbjct: 114 VLDTTVTLAPLLGLLGTIIGMFHAFQVLAEPGAAPNAVTGGVAEALVATAAGLLIAVIGL 173
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALI 246
+ + +K L+
Sbjct: 174 VCF-NGLNERVRLAVHQLDTLKVMLV 198
>gi|220935400|ref|YP_002514299.1| TolQ protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996710|gb|ACL73312.1| TolQ protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 228
Score = 39.1 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI+ A LS + ++ I +L T LG+ +
Sbjct: 130 LATVGSTSPYIGLFGTVWGIMHAFIGLSGAQQATLAMVAPGIAEALIATALGLFAA 185
>gi|209886405|ref|YP_002290262.1| protein TolQ [Oligotropha carboxidovorans OM5]
gi|209874601|gb|ACI94397.1| protein TolQ [Oligotropha carboxidovorans OM5]
Length = 237
Score = 39.1 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ +M I + + ++ +G + P +G+ G + GI+ + ++ + S +
Sbjct: 119 RIDKVMSVSIAREIERLDRRLLVLATVGSASPFVGLFGTVWGIMSSFQSIAASKNTSLAV 178
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+I +
Sbjct: 179 VAPGIAEALFATAIGLIAA 197
>gi|146283141|ref|YP_001173294.1| TolQ protein [Pseudomonas stutzeri A1501]
gi|145571346|gb|ABP80452.1| TolQ protein [Pseudomonas stutzeri A1501]
Length = 221
Score = 39.1 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M I + + ++ +G + P IG+ G + GI+ + L+Q + + I
Sbjct: 107 MRVAISREEEKLEQSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGI 166
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 167 AEALIATAIGLFAA 180
>gi|114320592|ref|YP_742275.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114226986|gb|ABI56785.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
Length = 218
Score = 39.1 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 131 RMIIVGNARSYEIENLMDEEIDII-LYEKLKPYHAISHMGESL---PAIGIVGAILGIIK 186
R++ G A + +M E I+ + +E + ++ +G P +G++G ++G+IK
Sbjct: 72 RVLGAGLANADCRREVMTEAIEDVGRHEAHRLERFLNTLGTLAAITPLLGLLGTVIGMIK 131
Query: 187 A-----MGNLSQSPKILGTAIGVSLTGTLLGIILS 216
+ L +P + I +L T G+ ++
Sbjct: 132 VFSVISLQGLGDTPA-MAGGISEALITTAAGLSVA 165
>gi|253702169|ref|YP_003023358.1| protein TolQ [Geobacter sp. M21]
gi|251777019|gb|ACT19600.1| protein TolQ [Geobacter sp. M21]
Length = 224
Score = 39.1 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 46/142 (32%), Gaps = 9/142 (6%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIF----TSIPTVLENNELTTFICDYMRMIIVGNA 138
L + K + +D NS + + + E D +
Sbjct: 45 RFLDFFWKAKRFDAINGQLDRFTNSPLTVLFQEGYGELKKLQEKVEEKADPTSISTDLGG 104
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP--- 195
I + + K ++ G + P IG+ G + GI+ A + Q+
Sbjct: 105 ID-NIARALRRATTSEITRLEKYLTFLATTGATAPFIGLFGTVWGIMTAFEKIGQTGSAS 163
Query: 196 -KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 164 LAVVAPGIAEALIATAIGLVAA 185
>gi|317479591|ref|ZP_07938718.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
gi|316904253|gb|EFV26080.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
Length = 267
Score = 39.1 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 224
Query: 215 LS 216
++
Sbjct: 225 VA 226
>gi|296156467|ref|ZP_06839305.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295893066|gb|EFG72846.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 215
Score = 39.1 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGT 209
I + + + + + + P +G++G I+G++ + P + + SL T
Sbjct: 106 IERDMSRGFWVLETIVTAAPLLGLLGTIVGMMHSFQLFGGTGLVDPAGVTGGVAQSLVAT 165
Query: 210 LLGI---ILSYSLCNPLTSQIKSTRLK 233
+G+ + + N + +++ +
Sbjct: 166 AIGLVVALFALFAFNYFSRRLERLMDE 192
>gi|254443562|ref|ZP_05057038.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198257870|gb|EDY82178.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 227
Score = 39.1 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 37/100 (37%), Gaps = 12/100 (12%)
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH--------AISHMGESLPAIGIVGA 180
Y R+ ++ + E ++ L L ++ + P G++G
Sbjct: 91 YHRIKAKDGESDEQLRSARVEHVENALQRALANKTLNYESSMVFLATIVSGAPFFGLLGT 150
Query: 181 ILGIIKAMGNLSQSPKI----LGTAIGVSLTGTLLGIILS 216
+ G++ A G++ L + +L T+ G+ ++
Sbjct: 151 VWGVMDAFGSMGLQANATLQNLAPGVSGALLTTVAGLCVA 190
>gi|152979451|ref|YP_001345080.1| Tol-Pal system TolQ [Actinobacillus succinogenes 130Z]
gi|150841174|gb|ABR75145.1| Tol-Pal system TolQ [Actinobacillus succinogenes 130Z]
Length = 228
Score = 39.1 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M+ E++ + ++ + P IG+ G + GI+ A LS + +++ I
Sbjct: 118 MNREVETLESR----IPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGI 173
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 174 AEALIATAIGLFAA 187
>gi|226945716|ref|YP_002800789.1| TolQ proton channel [Azotobacter vinelandii DJ]
gi|226720643|gb|ACO79814.1| TolQ proton channel [Azotobacter vinelandii DJ]
Length = 231
Score = 39.1 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M I + + ++ +G + P IG+ G + GI+ + L+Q + + I
Sbjct: 117 MRVAISREEEKLEQSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLSTVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALIATAIGLFAA 190
>gi|327481494|gb|AEA84804.1| TolQ protein [Pseudomonas stutzeri DSM 4166]
Length = 230
Score = 39.1 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M I + + ++ +G + P IG+ G + GI+ + L+Q + + I
Sbjct: 116 MRVAISREEEKLEQSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGI 175
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 176 AEALIATAIGLFAA 189
>gi|86160450|ref|YP_467235.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776961|gb|ABC83798.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
Length = 233
Score = 39.1 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 20/130 (15%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK--- 196
+ +I ++ E + + + + +G + P +G+ G ++GI+ A ++ + +
Sbjct: 100 AEKITAAVERERQQVNLKLRRNLWILGTVGATAPFVGLFGTVVGIMHAFRQMAATGQGGF 159
Query: 197 -ILGTAIGVSLTGTLLGIILS----------YSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
++ I +L T GI ++ L Q++ + IVK+ L
Sbjct: 160 TVVAAGISEALVTTAGGIAVAIEAVVIFNFLNVHVQKLALQLRLLTEE---YLEIVKEVL 216
Query: 246 IAYMNGAIPQ 255
GA PQ
Sbjct: 217 ---AGGARPQ 223
>gi|312796777|ref|YP_004029699.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
gi|312168552|emb|CBW75555.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
Length = 225
Score = 39.1 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 36/125 (28%), Gaps = 21/125 (16%)
Query: 96 ETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIIL 155
E + + V + + MR + E
Sbjct: 81 ALERIFESGMREFLKAKEKRVADPGAILDGARRAMRAAFQREMDALE------------- 127
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLL 211
++ +G P IG+ G + GI+ A L+ + + I +L T +
Sbjct: 128 ----ANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLASVAPGIAEALVATAI 183
Query: 212 GIILS 216
G+ +
Sbjct: 184 GLFAA 188
>gi|238926299|ref|ZP_04658059.1| MotA/TolQ/ExbB proton channel [Selenomonas flueggei ATCC 43531]
gi|238885979|gb|EEQ49617.1| MotA/TolQ/ExbB proton channel [Selenomonas flueggei ATCC 43531]
Length = 195
Score = 39.1 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 9/143 (6%)
Query: 79 LKLLYILMYNLKKGSRNETENHI-DDPYNSTIFTSIPTV-LENNELTTFICDYMRMIIVG 136
+ + L+Y E E + + I P V ++N + F+ + G
Sbjct: 14 IAVDRFLLYRRAAQGAKELETTVAESLRKHKIDEVAPAVEGKDNMVAYFVKSALDARQAG 73
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---Q 193
+E + E +L Y +S + P +G++G I G+I++ +
Sbjct: 74 EDVPMTLEGVYGEA--AMLLRARLNY--LSTIVTLAPLLGLLGTISGMIQSFSIFNLQAG 129
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
P + IG +L T G+ ++
Sbjct: 130 QPMAITGGIGEALVATATGLFVA 152
>gi|163802044|ref|ZP_02195940.1| TolQ protein [Vibrio sp. AND4]
gi|159174185|gb|EDP58993.1| TolQ protein [Vibrio sp. AND4]
Length = 232
Score = 39.1 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGLFAAIPAV 190
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+++ + K Y + + ++
Sbjct: 191 M-FYNRLSNKVSKLEHTYATFSEEFHSILHRQA 222
>gi|59801726|ref|YP_208438.1| ExbB [Neisseria gonorrhoeae FA 1090]
gi|59718621|gb|AAW90026.1| transport protein [Neisseria gonorrhoeae FA 1090]
Length = 236
Score = 39.1 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 142 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 198
>gi|255021244|ref|ZP_05293294.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
gi|209574036|gb|ACI62956.1| TonB system transport protein ExbB4 [Acidithiobacillus caldus]
gi|254969359|gb|EET26871.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
Length = 228
Score = 39.1 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
G + + + ++E + + + + + P +G+ G I+G+ A L+
Sbjct: 87 GQVKGEALASRLEESVITLAPNLDRRLWLLDTIITLAPLLGLFGTIIGMFHAFHVLAAPG 146
Query: 195 --PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
P + + +L T G+ ++ + + + VK LI M+G
Sbjct: 147 HAPTEVTGGVADALVATASGLFIAILGLLAF-NGFNNQVRQILLQLDSVKTMLINRMDGQ 205
Query: 253 I 253
Sbjct: 206 P 206
>gi|212712436|ref|ZP_03320564.1| hypothetical protein PROVALCAL_03530 [Providencia alcalifaciens DSM
30120]
gi|212684893|gb|EEB44421.1| hypothetical protein PROVALCAL_03530 [Providencia alcalifaciens DSM
30120]
Length = 227
Score = 39.1 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ G +R+ I M+ E++ + E P+ + +G P IG+ G + GI+ A L
Sbjct: 104 VVTGASRAMRIS--MNRELESV--ESHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALG 157
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+ +++ I +L T +G+ + +++ K + Y + +A
Sbjct: 158 AVKQATLQMVAPGIAEALIATAIGLFAAIPAVM-AYNRLNLRVNKLEQSYDNFMEEFLAI 216
Query: 249 MNGAI 253
++
Sbjct: 217 LHRQA 221
>gi|78358668|ref|YP_390117.1| tolQ protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78221073|gb|ABB40422.1| Cell division and transport-associated protein TolQ [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 228
Score = 39.1 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M + + + + + + + ++ + P IG+ G + GI+ + ++
Sbjct: 93 MQSSEDVVADNVRRALRQGVSMQTSRLSSSLAFLATCANAAPFIGLFGTVWGIMHSFHSI 152
Query: 192 S----QSPKILGTAIGVSLTGTLLGIILS 216
S + I +L T +G+ ++
Sbjct: 153 GLMKTASLAAVAPGISEALVATAIGLGVA 181
>gi|325923400|ref|ZP_08185065.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas gardneri ATCC 19865]
gi|325546115|gb|EGD17304.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas gardneri ATCC 19865]
Length = 259
Score = 39.1 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ S + I +L T +G+ ++
Sbjct: 163 LANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVA 219
>gi|311694760|gb|ADP97633.1| biopolymer transport protein [marine bacterium HP15]
Length = 193
Score = 39.1 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
++ N+R +IE M+E + +L K ++ + +G++G I+G+I A +
Sbjct: 71 LLSNSRREDIEYAMEEGLMEVLPRLEKRTQYLATLANIATLLGLLGTIIGLIAAFTAVAA 130
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
SQ +L +I V++ T G++ + L + +++ + + + L+
Sbjct: 131 ADPSQKASLLSESISVAMNTTAFGLMSAIPLLM-FHAVLQTRTNEIVDSFEMAGVKLLNI 189
Query: 249 MN 250
++
Sbjct: 190 VS 191
>gi|256823068|ref|YP_003147031.1| protein TolQ [Kangiella koreensis DSM 16069]
gi|256796607|gb|ACV27263.1| protein TolQ [Kangiella koreensis DSM 16069]
Length = 237
Score = 39.1 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 46/124 (37%), Gaps = 11/124 (8%)
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEK----LKPYHAISHMGESLPAIGIVGAIL 182
++MR+ + + + + + + ++ +G P IG+ G +
Sbjct: 102 REFMRLRQQSGVSPEAVMDGTHRAMRVAHSREVEKLERNLSFLATVGSVTPYIGLFGTVW 161
Query: 183 GII---KAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNP---LTSQIKSTRLKQH 235
GI+ A+G + Q + ++ I +L T +G+ + T++++ +
Sbjct: 162 GIMNSFIALGAVKQATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFTNRLQRIETQYE 221
Query: 236 RLYI 239
Sbjct: 222 NFLE 225
>gi|259909073|ref|YP_002649429.1| colicin uptake protein TolQ [Erwinia pyrifoliae Ep1/96]
gi|224964695|emb|CAX56212.1| TolQ colicin import protein [Erwinia pyrifoliae Ep1/96]
gi|310767027|gb|ADP11977.1| Protein tolQ [Erwinia sp. Ejp617]
Length = 225
Score = 39.1 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|121610019|ref|YP_997826.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121554659|gb|ABM58808.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 239
Score = 39.1 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
+ ID ++ +G + P IG+ G + GI A+ ++ + + I
Sbjct: 112 LRNCIDAFTARLQSGLAILASVGSTAPFIGLFGTVWGIYHALLSIGTSGQSTIDKVAGPI 171
Query: 203 GVSLTGTLLGIILS 216
G +L T LG+ ++
Sbjct: 172 GEALIMTALGLAVA 185
>gi|301630152|ref|XP_002944191.1| PREDICTED: biopolymer transport protein exbB-like [Xenopus
(Silurana) tropicalis]
Length = 220
Score = 39.1 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ +R+ ++ ++ + + +L ++ +G + P +G++G + GI A+ ++
Sbjct: 94 LAAQGSRAQQLTRVLRDALHGVLGRLQWGQVLLATVGSTAPFVGLLGTVWGIYHALATIA 153
Query: 193 Q----SPKILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKS 229
+ + + +G +L T G+ +L+Y++ + +I++
Sbjct: 154 GAGQITIERVAGPVGEALVMTAAGLAVAIPAVLAYNVYGRIAGRIEA 200
>gi|322418111|ref|YP_004197334.1| protein TolQ [Geobacter sp. M18]
gi|320124498|gb|ADW12058.1| protein TolQ [Geobacter sp. M18]
Length = 224
Score = 39.1 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 13/144 (9%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIF----TSIPTVLENNELTTFICD--YMRMIIVG 136
L + K + + +D +S + + + E D + + G
Sbjct: 45 RFLEFFWKAKRFDAINSQLDRFEHSPLTVLFQEGYGELKKLQEKVEEKADPNTVSTDLGG 104
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP- 195
I + + K ++ G + P +G+ G + GI+ A + QS
Sbjct: 105 VDN---IARALRRATTSEITRLEKYLTFLATTGATAPFVGLFGTVWGIMTAFEKIGQSGS 161
Query: 196 ---KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 162 ASLAVVAPGIAEALIATAIGLVAA 185
>gi|171059908|ref|YP_001792257.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170777353|gb|ACB35492.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 278
Score = 39.1 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
I ++E + + + K ++ +G + P IG+ G + GI+ A+ + S +
Sbjct: 162 ITTSLEEAGEEVEHRLQKGLAFLATVGSTSPFIGLFGTVWGILNALTAIGVAGQASIDKV 221
Query: 199 GTAIGVSLTGTLLGIILS 216
+G +L T +G+ ++
Sbjct: 222 AGPVGEALIMTAIGLAVA 239
>gi|150004492|ref|YP_001299236.1| putative biopolymer transport protein [Bacteroides vulgatus ATCC
8482]
gi|254882774|ref|ZP_05255484.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294778251|ref|ZP_06743677.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
gi|319643918|ref|ZP_07998493.1| biopolymer transporter [Bacteroides sp. 3_1_40A]
gi|149932916|gb|ABR39614.1| putative biopolymer transport protein [Bacteroides vulgatus ATCC
8482]
gi|254835567|gb|EET15876.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294447879|gb|EFG16453.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
gi|317384442|gb|EFV65409.1| biopolymer transporter [Bacteroides sp. 3_1_40A]
Length = 257
Score = 39.1 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q SP ++ + V+L T+ G++
Sbjct: 155 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDKIQQAGDISPTVVAGGMKVALITTIFGLV 214
Query: 215 LS 216
++
Sbjct: 215 VA 216
>gi|332993886|gb|AEF03941.1| tolQ protein [Alteromonas sp. SN2]
Length = 230
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E ++ G P IG+ G + GI+ A L + + ++ I
Sbjct: 111 MRVTMSRQVEELESRLPFLATAGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGI 170
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 171 AEALIATAIGLFAA 184
>gi|295084868|emb|CBK66391.1| Biopolymer transport proteins [Bacteroides xylanisolvens XB1A]
Length = 265
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 163 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 222
Query: 215 LS 216
++
Sbjct: 223 VA 224
>gi|237713980|ref|ZP_04544461.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262407032|ref|ZP_06083581.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646602|ref|ZP_06724234.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294809766|ref|ZP_06768450.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|298479708|ref|ZP_06997908.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
gi|229445804|gb|EEO51595.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355735|gb|EEZ04826.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638044|gb|EFF56430.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294443006|gb|EFG11789.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|298274098|gb|EFI15659.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
Length = 266
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 164 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 223
Query: 215 LS 216
++
Sbjct: 224 VA 225
>gi|261399992|ref|ZP_05986117.1| biopolymer transport protein ExbB [Neisseria lactamica ATCC 23970]
gi|313667886|ref|YP_004048170.1| biopolymer transport protein [Neisseria lactamica ST-640]
gi|269210457|gb|EEZ76912.1| biopolymer transport protein ExbB [Neisseria lactamica ATCC 23970]
gi|313005348|emb|CBN86781.1| biopolymer transport protein [Neisseria lactamica 020-06]
Length = 220
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 126 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 182
>gi|82702177|ref|YP_411743.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82410242|gb|ABB74351.1| outer membrane transport energization protein ExbB [Nitrosospira
multiformis ATCC 25196]
Length = 254
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 5/137 (3%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
L GS E + + + + F + L N ++ + S I
Sbjct: 53 FLKRFWSAGSLQEVNSTLKEDADDNAFAQLAR-LAMNAAADSEKHGLQNLAAAGGASEFI 111
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
++ +D + I+ G + P IG+ G + GI A+ + + +
Sbjct: 112 TRVLRNGLDQEAAQVENGLTVIASAGSAAPYIGLFGTVWGIYHALIQIGLSGQGTLDKVA 171
Query: 200 TAIGVSLTGTLLGIILS 216
+G +L T LG+ ++
Sbjct: 172 GPVGEALIMTALGLAVA 188
>gi|332283947|ref|YP_004415858.1| biopolymer transport protein [Pusillimonas sp. T7-7]
gi|330427900|gb|AEC19234.1| biopolymer transport protein [Pusillimonas sp. T7-7]
Length = 202
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
A++ + P +G+ G ++G+I+ + P L I ++L T GII++
Sbjct: 109 ALATIAVVAPLMGLFGTVVGMIEIFASYTPAGGDPSQLARGISIALYNTGFGIIIA 164
>gi|283784490|ref|YP_003364355.1| colicin import protein [Citrobacter rodentium ICC168]
gi|282947944|emb|CBG87508.1| colicin import protein [Citrobacter rodentium ICC168]
Length = 230
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 112 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 171
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 172 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|91779197|ref|YP_554405.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Burkholderia xenovorans LB400]
gi|91691857|gb|ABE35055.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 214
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGT 209
I + + + + + + P +G++G I+G++ + P + + SL T
Sbjct: 106 IERDMSRGFWVLETIVTAAPLLGLLGTIVGMMHSFQLFGGTGLVDPAGVTGGVAQSLVAT 165
Query: 210 LLGI---ILSYSLCNPLTSQIKSTRLK-QHRLYIIVKKALIAYMNGAIP 254
+G+ + + N + +++ + + + + +A GA P
Sbjct: 166 AIGLVVALFALFAFNYFSRRLERLMDELESFANARLGQIRLATAAGAQP 214
>gi|29347465|ref|NP_810968.1| putative biopolymer transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570680|ref|ZP_04848088.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|29339365|gb|AAO77162.1| putative biopolymer transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251839629|gb|EES67712.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 267
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+++A + Q SP ++ + V+L T+ G+I
Sbjct: 165 EKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLI 224
Query: 215 LS 216
++
Sbjct: 225 VA 226
>gi|254700331|ref|ZP_05162159.1| tonB-system energizer ExbB [Brucella suis bv. 5 str. 513]
Length = 307
Score = 39.1 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ + + K ++ +G P +G+ G + GI+ + N+S+ +
Sbjct: 176 ERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLA 235
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 236 VVAPGIAEALLATAIGLVAA 255
>gi|117618590|ref|YP_858097.1| protein TolQ [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559997|gb|ABK36945.1| protein TolQ [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 229
Score = 39.1 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E ++ +G P IG+ G + GI+ A L Q + +++ I
Sbjct: 113 MRVSLSRAVDELESNLPVLATIGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILSYS---LCNPLTSQIKSTRLKQHRLY 238
+L T +G+ + N +++++
Sbjct: 173 AEALIATAMGLFAAIPAVIFYNRFSNKVERLENAYANFM 211
>gi|21232451|ref|NP_638368.1| TolQ protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66767466|ref|YP_242228.1| TolQ protein [Xanthomonas campestris pv. campestris str. 8004]
gi|188990572|ref|YP_001902582.1| Biopolymer transport TolQ protein [Xanthomonas campestris pv.
campestris str. B100]
gi|21114233|gb|AAM42292.1| TolQ protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66572798|gb|AAY48208.1| TolQ protein [Xanthomonas campestris pv. campestris str. 8004]
gi|167732332|emb|CAP50524.1| Biopolymer transport TolQ protein [Xanthomonas campestris pv.
campestris]
Length = 259
Score = 39.1 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ S + I +L T +G+ ++
Sbjct: 163 LANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVA 219
>gi|329295945|ref|ZP_08253281.1| colicin uptake protein TolQ [Plautia stali symbiont]
Length = 228
Score = 39.1 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|297539679|ref|YP_003675448.1| protein TolQ [Methylotenera sp. 301]
gi|297259026|gb|ADI30871.1| protein TolQ [Methylotenera sp. 301]
Length = 226
Score = 39.1 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A LS + I +L T +G+ +
Sbjct: 135 LASVGSVSPYIGLFGTVWGIMNAFRGLSNVAQATLSQVAPGIAEALVATAIGLFAA 190
>gi|296103333|ref|YP_003613479.1| colicin uptake protein TolQ [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057792|gb|ADF62530.1| colicin uptake protein TolQ [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 230
Score = 39.1 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M ++ L + +G P IG+ G + GI+ A L + +++ I
Sbjct: 112 MRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 171
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ K Y + A ++
Sbjct: 172 AEALIATAIGLFAAIPAVM-AYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|239832786|ref|ZP_04681115.1| protein TolQ [Ochrobactrum intermedium LMG 3301]
gi|239825053|gb|EEQ96621.1| protein TolQ [Ochrobactrum intermedium LMG 3301]
Length = 236
Score = 39.1 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + + ++ +G + P IG+ G ++GI+ + + + S
Sbjct: 112 QMRIDKAMDVALAREGEKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLLAA 192
>gi|281421199|ref|ZP_06252198.1| hypothetical protein PREVCOP_05080 [Prevotella copri DSM 18205]
gi|281404734|gb|EFB35414.1| MotA/TolQ/ExbB proton channel family protein [Prevotella copri DSM
18205]
Length = 220
Score = 39.1 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I P++G +G ++G++ + + Q SP I+ + + V+L T+ GII
Sbjct: 123 EKGCSWIKLFIAMAPSLGFLGTVIGMVMSFDQIQQAGDISPTIVASGMKVALITTIFGII 182
Query: 215 LS 216
++
Sbjct: 183 VA 184
>gi|17986648|ref|NP_539282.1| biopolymer transport EXBB protein [Brucella melitensis bv. 1 str.
16M]
gi|17982264|gb|AAL51546.1| biopolymer transport exbb protein [Brucella melitensis bv. 1 str.
16M]
Length = 290
Score = 39.1 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 154 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 213
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 214 TTNLAVVAPGIAEALLATAIGLVAA 238
>gi|328953810|ref|YP_004371144.1| protein TolQ [Desulfobacca acetoxidans DSM 11109]
gi|328454134|gb|AEB09963.1| protein TolQ [Desulfobacca acetoxidans DSM 11109]
Length = 263
Score = 39.1 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
D + I V A + + ++ + ++ G + P IG+ G + GI+
Sbjct: 125 RDVLGTIAVRGAGVENVNRSLRRAMNTETTRLSRAITFLATTGNTAPFIGLFGTVWGIMT 184
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + S S ++ I +L T +G+ +
Sbjct: 185 SFRGIGLKGSASLAVVAPGISEALVATAVGLAAA 218
>gi|319786282|ref|YP_004145757.1| protein TolQ [Pseudoxanthomonas suwonensis 11-1]
gi|317464794|gb|ADV26526.1| protein TolQ [Pseudoxanthomonas suwonensis 11-1]
Length = 258
Score = 39.1 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
++++G + P +G+VG + GI+ M ++ + I +L T +G+ ++
Sbjct: 162 LANIGSTAPYVGLVGTVFGIMVTMHDMVSQGQQVGIASVAPGISEALFATAIGLFVA 218
>gi|224823452|ref|ZP_03696561.1| protein TolQ [Lutiella nitroferrum 2002]
gi|224603907|gb|EEG10081.1| protein TolQ [Lutiella nitroferrum 2002]
Length = 216
Score = 39.1 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A +GN Q + + I +L T +G+ +
Sbjct: 123 LATVGSVSPYIGLFGTVWGIMHAFIGLGNAGQATLSTVAPGIAEALVATAIGLFAA 178
>gi|124010639|ref|ZP_01695241.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
gi|123982152|gb|EAY23787.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
Length = 278
Score = 39.1 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 74/202 (36%), Gaps = 8/202 (3%)
Query: 52 KVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFT 111
+V+K + F L + L I+ +L + + ++D NS
Sbjct: 70 QVVKTKFIEGGWDFMSTVLICLILGLAVALEKIISLSLATTNTKKLVKKVEDALNSGGVE 129
Query: 112 SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES 171
V N ++ + ++++ + + + K IS
Sbjct: 130 KAKEVTRNTRGPVASIFTQGLMRISEGIDMVEKSVISYGS-VEMGKLEKGISWISLFIAL 188
Query: 172 LPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS---YSLCNPLT 224
P +G +G ++G+I A + SP+I+ I V+L T+ G+I++ N +
Sbjct: 189 APMLGFMGTVIGMIDAFDQIQAAGDVSPQIVAGGIKVALITTVSGLIVAIILQIFYNYIV 248
Query: 225 SQIKSTRLKQHRLYIIVKKALI 246
S++ S + I + L+
Sbjct: 249 SKVDSIVNQMEEASIALIDVLV 270
>gi|221065983|ref|ZP_03542088.1| protein TolQ [Comamonas testosteroni KF-1]
gi|220711006|gb|EED66374.1| protein TolQ [Comamonas testosteroni KF-1]
Length = 234
Score = 39.1 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILG 199
M L E + + P +G+ G + G++ A N+ Q + +
Sbjct: 111 RRAMRASFQRELDEIESGLSFLGTVASVSPYVGLFGTVWGVMHAFTGFANMEQITLATVA 170
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 PGIAEALVATAMGLFAA 187
>gi|87118955|ref|ZP_01074853.1| TolQ protein [Marinomonas sp. MED121]
gi|86165346|gb|EAQ66613.1| TolQ protein [Marinomonas sp. MED121]
Length = 226
Score = 39.1 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 65/180 (36%), Gaps = 24/180 (13%)
Query: 49 NPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNST 108
VI L + +D + + L + +G R E I++ + +
Sbjct: 27 FSWVVIFQRIRVLRNAKKVRRTFEDLFWSGMDLSQLYRQITAEGRRIEG---IENIFTAG 83
Query: 109 I--FTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
I FT + N + + R + V AR E +D+ + ++
Sbjct: 84 IKEFTRL-RQSANMDPDAVMEGVQRSMRVALAREEEK---LDQHLPF-----------LA 128
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNP 222
+G + P +G+ G + GI+ + L++ + + I +L T +G++ +
Sbjct: 129 TVGSTSPYVGLFGTVWGIMHSFIGLAEVQQATLATVAPGIAEALIATAIGLLAAIPAVIC 188
>gi|325142887|gb|EGC65252.1| ExbB [Neisseria meningitidis 961-5945]
Length = 216
Score = 39.1 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 126 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 182
>gi|300115030|ref|YP_003761605.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299540967|gb|ADJ29284.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 174
Score = 39.1 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+ I M EI + L+ L I + LP +G++G ++G+I+ + + +
Sbjct: 69 AQRIREGMVAEISVSLHRFLL---LIKTLAAVLPMLGLLGTVMGMIQVFDVMTVFGTGNA 125
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
+ I ++L T+ G++ + ++ ++ + +
Sbjct: 126 RGFAGGISIALITTMAGLVTA-LSGLYFSANLEHRVQRAIQY 166
>gi|149919461|ref|ZP_01907942.1| tonB system transport protein ExbB/TolQ [Plesiocystis pacifica
SIR-1]
gi|149819767|gb|EDM79192.1| tonB system transport protein ExbB/TolQ [Plesiocystis pacifica
SIR-1]
Length = 211
Score = 39.1 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 5/143 (3%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+ + KK E + + Y R
Sbjct: 30 LTRAFKSSATFAKKSRPLLEELDLGKLEELAKGKEFEKAPLAKLTRMGLAAYNRHEGAEE 89
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQ 193
+ + ++ +D + E K ++ +G + P IG+ G ++GII A
Sbjct: 90 RLEFARRD-LERRLDEVGSEARKGMGLLASVGSTAPFIGLFGTVIGIIVAFTGIAAAGGG 148
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+ + I +L T +G+ ++
Sbjct: 149 GIEAVSAGIAEALIVTAIGLAVA 171
>gi|109898595|ref|YP_661850.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109700876|gb|ABG40796.1| outer membrane transport energization protein ExbB
[Pseudoalteromonas atlantica T6c]
Length = 233
Score = 39.1 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPK 196
+I++ + + + + + + + P +G+ G ++G+I+A + +P
Sbjct: 90 DIKDEIYRQAQLAIAQLNSYLRVLEVIATLAPLMGLFGTVIGMIEAFKAMESAGAQVNPA 149
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+L I +L T +G+ ++ + L S + + +
Sbjct: 150 VLSGGIWQALLTTAVGLAVAIPVSM-LNSYFERKAEVESQAIQ 191
>gi|319779145|ref|YP_004130058.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
gi|317109169|gb|ADU91915.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
Length = 229
Score = 39.1 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
++ +G P IG++G + GI+ + L+ + I +L T +G+ +
Sbjct: 137 LATVGSVSPYIGLLGTVWGIMHSFLGLTADTTATLSAVAPGIAEALIATAIGLFAA 192
>gi|311103964|ref|YP_003976817.1| protein TolQ [Achromobacter xylosoxidans A8]
gi|310758653|gb|ADP14102.1| protein TolQ [Achromobacter xylosoxidans A8]
Length = 226
Score = 39.1 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKIL 198
+ E+D + + ++ G P IG++G + GI+ A + N+ Q + +
Sbjct: 116 MRAAYQREMDSLESHL----NFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASV 171
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 APGIAEALIATAIGLFAA 189
>gi|261365668|ref|ZP_05978551.1| TonB system transport protein ExbB [Neisseria mucosa ATCC 25996]
gi|288565834|gb|EFC87394.1| TonB system transport protein ExbB [Neisseria mucosa ATCC 25996]
Length = 219
Score = 39.1 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
+I N M++ + Y A++ +G + P IG+ G + GI A+ N+ Q S
Sbjct: 108 QIRNSMEQAMRQFDY----GMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAA 163
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T G+ ++
Sbjct: 164 VAGPIGEALVSTAAGLFVA 182
>gi|114776331|ref|ZP_01451376.1| MotA/TolQ/ExbB proton channel family protein [Mariprofundus
ferrooxydans PV-1]
gi|114553161|gb|EAU55559.1| MotA/TolQ/ExbB proton channel family protein [Mariprofundus
ferrooxydans PV-1]
Length = 229
Score = 39.1 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+ +D + + + ++ +G + P IG+ G + GI+ A ++ + + +
Sbjct: 114 VRRSLDAAFSREIEKLSRHLAFLATVGSTSPFIGLFGTVWGIVNAFQSIAMTKNTALTSV 173
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T G++ +
Sbjct: 174 APGIAEALVATAFGLVAA 191
>gi|15595395|ref|NP_248889.1| transport protein ExbB [Pseudomonas aeruginosa PAO1]
gi|107099188|ref|ZP_01363106.1| hypothetical protein PaerPA_01000198 [Pseudomonas aeruginosa PACS2]
gi|116053917|ref|YP_788355.1| transport protein ExbB [Pseudomonas aeruginosa UCBPP-PA14]
gi|152985469|ref|YP_001345676.1| transport protein ExbB [Pseudomonas aeruginosa PA7]
gi|218888943|ref|YP_002437807.1| transport protein ExbB [Pseudomonas aeruginosa LESB58]
gi|254237565|ref|ZP_04930888.1| transport protein ExbB [Pseudomonas aeruginosa C3719]
gi|254243305|ref|ZP_04936627.1| transport protein ExbB [Pseudomonas aeruginosa 2192]
gi|296386686|ref|ZP_06876185.1| transport protein ExbB [Pseudomonas aeruginosa PAb1]
gi|313112225|ref|ZP_07797999.1| transport protein ExbB [Pseudomonas aeruginosa 39016]
gi|6118339|gb|AAF04083.1|AF190125_2 ExbB [Pseudomonas aeruginosa]
gi|9946033|gb|AAG03587.1|AE004458_2 transport protein ExbB [Pseudomonas aeruginosa PAO1]
gi|115589138|gb|ABJ15153.1| transport protein ExbB [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169496|gb|EAZ55007.1| transport protein ExbB [Pseudomonas aeruginosa C3719]
gi|126196683|gb|EAZ60746.1| transport protein ExbB [Pseudomonas aeruginosa 2192]
gi|150960627|gb|ABR82652.1| transport protein ExbB [Pseudomonas aeruginosa PA7]
gi|218769166|emb|CAW24926.1| transport protein ExbB [Pseudomonas aeruginosa LESB58]
gi|310884501|gb|EFQ43095.1| transport protein ExbB [Pseudomonas aeruginosa 39016]
Length = 239
Score = 39.1 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 101 RLERALRQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 160
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 161 VAGPIGSALIATGVGIAVA 179
>gi|332286929|ref|YP_004418840.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
gi|330430882|gb|AEC22216.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
Length = 224
Score = 39.1 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKIL 198
+ E+D + + ++ G P IG++G + GI+ A + ++ Q + +
Sbjct: 114 MRATYQREMDSLESHL----NFLASAGSVSPYIGLLGTVWGIMHAFIGLSSMQQATLSAV 169
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 170 APGIAEALIATAIGLFAA 187
>gi|254694330|ref|ZP_05156158.1| tonB-system energizer ExbB [Brucella abortus bv. 3 str. Tulya]
Length = 307
Score = 38.7 bits (89), Expect = 0.86, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 171 GEGLKERVASRLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 230
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 231 TTNLAVVAPGIAEALLATAIGLVAA 255
>gi|116873791|ref|YP_850572.1| cell cycle protein FtsW [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742669|emb|CAK21793.1| cell division protein, FtsW/RodA/SpoVE family [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 389
Score = 38.7 bits (89), Expect = 0.86, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 5 IGLFITILCIIGGFY-AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV--SL 61
+G + + II G G IL+ F V V G L VM NP + K
Sbjct: 168 LGTILVFVAIIIGMVFISGVTWKILVPVFSSVAVLGGTLIYLVMYNPAFLQKLGFKPYQF 227
Query: 62 LEIFGYKALGQDTYCDVLKLLYIL 85
I + +D D ++LL +
Sbjct: 228 KRITSWLRPEEDPLGDGMQLLRSM 251
>gi|87308723|ref|ZP_01090862.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
gi|87288434|gb|EAQ80329.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
Length = 279
Score = 38.7 bits (89), Expect = 0.86, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKI 197
+E +++ + + +S +G P +G++G + G+I A ++ +
Sbjct: 152 VEKALEDSVAEQSARLFRKIEYLSVIGNIAPMVGLLGTVTGMIFAFQQVASTQGAAGAAD 211
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLT 224
L I +L T+ G++++
Sbjct: 212 LAEGIYQALVTTVGGLLVAIPSLGAFA 238
>gi|91977799|ref|YP_570458.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91684255|gb|ABE40557.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 294
Score = 38.7 bits (89), Expect = 0.86, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 66/193 (34%), Gaps = 17/193 (8%)
Query: 39 GAGLGGFVM-----ANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGS 93
GA G V +P + + + + + A + I + +
Sbjct: 54 GASTGASVAPGLAELSPWTMFLQADIVVKAVMVGLAFASVITWTIFIAKKIELGRARWRL 113
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM------IIVGNARSYEIENLM 147
R+ + + S + ++ LT+ + +R I + + +
Sbjct: 114 RSALKQIAESRSLSE--AQLALGDSDHLLTSLVTAAVREARLSAGIASDSGIKERVASSF 171
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIG 203
E + ++ +G + P IG+ G + GI+ + +S+ + ++ I
Sbjct: 172 SEIVRAEARHMRHGMGFLASIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIA 231
Query: 204 VSLTGTLLGIILS 216
+L T +G++ +
Sbjct: 232 EALLATAIGLVAA 244
>gi|269468526|gb|EEZ80180.1| biopolymer transport protein TolQ [uncultured SUP05 cluster
bacterium]
Length = 222
Score = 38.7 bits (89), Expect = 0.86, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
E T F + +I+ + R+Y M+ + + ++ + S P IG+ G
Sbjct: 90 EFTHFSSSSNQALIMNSERAYR---AMNTTANNEVDRLDGGLSVLAMIASSSPYIGLFGT 146
Query: 181 ILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ GI+ + L+ + I+ I +L T G+ +
Sbjct: 147 VWGIMHSFIGLASVKQATIAIVAPGIAEALIATAFGLFAA 186
>gi|262274015|ref|ZP_06051827.1| ferric siderophore transport system biopolymer transport protein
ExbB [Grimontia hollisae CIP 101886]
gi|262221825|gb|EEY73138.1| ferric siderophore transport system biopolymer transport protein
ExbB [Grimontia hollisae CIP 101886]
Length = 235
Score = 38.7 bits (89), Expect = 0.86, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG++G ++G+I+ LS SP L +G++++ T G++++
Sbjct: 117 KMLNIIGVLSPLIGLLGTVMGLIEMFKGLSATQGGISPAELADGLGLAMSTTAAGLLIA 175
>gi|160900055|ref|YP_001565637.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160365639|gb|ABX37252.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 240
Score = 38.7 bits (89), Expect = 0.86, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 58/180 (32%), Gaps = 18/180 (10%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
+ ++A + + L+I +K L ++ + +
Sbjct: 20 AVAIILLAMSVASWLVMIIKALDIVKFKKLARNAQ-------DFWHSPDLASGLEKLGDD 72
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
+P+ + + + + + D + S + M I
Sbjct: 73 RSNPFRYLVLEGREATAHHRKTSAHLHDTL-------DISDWVTRCMRNGISEFTARLQS 125
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI A+ + S + IG +L T LG+ ++
Sbjct: 126 GLAILASVGSTAPFIGLFGTVWGIYHALVAIGLSGQSSIDKVAGPIGEALIMTALGLAVA 185
>gi|332306760|ref|YP_004434611.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174089|gb|AEE23343.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 230
Score = 38.7 bits (89), Expect = 0.87, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPK 196
+I++ + + + + + + + P +G+ G ++G+I+A + +P
Sbjct: 90 DIKDEIYRQAQLAIAQLNSYLRVLEVIATLAPLMGLFGTVIGMIEAFKAMESAGAQVNPA 149
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+L I +L T +G+ ++ + L S + + +
Sbjct: 150 VLSGGIWQALLTTAVGLAVAIPVSM-LNSYFERKAEVEAQAIQ 191
>gi|330445538|ref|ZP_08309190.1| protein TolQ [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489729|dbj|GAA03687.1| protein TolQ [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 210
Score = 38.7 bits (89), Expect = 0.87, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 40/111 (36%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M + + E ++ +G P IG+ G + GI+ A L + ++ I
Sbjct: 94 MRVSLSKEVDELETSLPFLATVGSISPYIGLFGTVWGIMTAFIALGAVKQATLAMVAPGI 153
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + +++ + K Y + + ++
Sbjct: 154 AEALVATAMGLFAAIPAVM-FYNRLTNKVAKLEHTYATFMEEFSSILHRQA 203
>gi|313672600|ref|YP_004050711.1| mota/tolq/exbb proton channel [Calditerrivibrio nitroreducens DSM
19672]
gi|312939356|gb|ADR18548.1| MotA/TolQ/ExbB proton channel [Calditerrivibrio nitroreducens DSM
19672]
Length = 203
Score = 38.7 bits (89), Expect = 0.87, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 5/102 (4%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
+ ++E + + + + P +G +G +LG+I+ ++ + +
Sbjct: 87 RLTEFVEEAGSFEVQRLERFLPTLQTVASLAPLLGFLGTVLGMIQTFMVMANQGNANIQA 146
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
L I V+L T G+ ++ I+ K
Sbjct: 147 LSGGIAVALLTTAAGLFVAVPTVI-FYHIIRHRADKISLELE 187
>gi|225155104|ref|ZP_03723599.1| Biopolymer transport protein-like protein [Opitutaceae bacterium
TAV2]
gi|224804051|gb|EEG22279.1| Biopolymer transport protein-like protein [Opitutaceae bacterium
TAV2]
Length = 276
Score = 38.7 bits (89), Expect = 0.87, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIIL---SY 217
+S +G P IG+ G ++G+I A ++SQ P L AIG L T G+ + ++
Sbjct: 146 LSVIGVIAPMIGLTGTVIGMISAFASMSQAGAADPSKLSGAIGHVLHATASGLAVAIPAF 205
Query: 218 SLCNPLTSQIKSTRLK 233
+ +++ +
Sbjct: 206 VFYYLIRNRVTRVIHE 221
>gi|323138234|ref|ZP_08073306.1| protein TolQ [Methylocystis sp. ATCC 49242]
gi|322396486|gb|EFX99015.1| protein TolQ [Methylocystis sp. ATCC 49242]
Length = 247
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
IE ++D I + + ++ + + P +G+ G + GI+ + ++ + S +
Sbjct: 120 RIEKVLDVSIAREVEKLESNLLVLATVASAGPFVGLFGTVWGIMTSFRSIAASKNTSLAV 179
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 180 VAPGIAEALLATAIGLFAA 198
>gi|315304587|ref|ZP_07874831.1| rod shape-determining protein RodA [Listeria ivanovii FSL F6-596]
gi|313627042|gb|EFR95931.1| rod shape-determining protein RodA [Listeria ivanovii FSL F6-596]
Length = 389
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 5 IGLFITILCIIGGFY-AMGGNPYILIQPFEIVIVAGAGLGGFVMANP--LKVIKDSGVSL 61
+G + + II G G IL+ F + V GA L V+ N L+ + +
Sbjct: 168 LGTILVFIAIIIGMVFISGVTWKILLPLFSFITVIGATLIYLVLYNQAFLQKLGFAPYQF 227
Query: 62 LEIFGYKALGQDTYCDVLKLLYIL 85
I + +D D ++LL +
Sbjct: 228 KRITSWLRPEEDPLGDGMQLLRSM 251
>gi|307130417|ref|YP_003882433.1| MotA/TolQ/ExbB proton channel family protein [Dickeya dadantii
3937]
gi|306527946|gb|ADM97876.1| MotA/TolQ/ExbB proton channel family protein [Dickeya dadantii
3937]
Length = 232
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI---- 197
+E + ++I ++ +G + P IG+ G + GI+ A+ + QS
Sbjct: 97 RVERALQQQIQRERRTLENGLALLASIGTTSPFIGLFGTVWGIMAALQTIGQSGSASLDT 156
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 157 VAGPIGNALIATGIGIAVA 175
>gi|296314376|ref|ZP_06864317.1| biopolymer transport protein ExbB [Neisseria polysaccharea ATCC
43768]
gi|296838933|gb|EFH22871.1| biopolymer transport protein ExbB [Neisseria polysaccharea ATCC
43768]
Length = 220
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 126 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 182
>gi|260779151|ref|ZP_05888043.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605315|gb|EEX31610.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 232
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 23/197 (11%)
Query: 25 PYILIQPFEIV-IVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLY 83
+ +Q +V +V LG +++ +I L + +D + L
Sbjct: 8 LDLFLQASLLVKMVMLTLLGMSIVS--WAMIIKRSKVLSQAAKGAETFEDKFWSGTDLSV 65
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
+ K+ E I E L D I+ G R+
Sbjct: 66 LYQNAKKRKDELEGTEEI----------FYSGFTEFARLRKSNADSPDFIMEGTGRA--- 112
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
M + + E ++ +G P IG+ G + GI+ A L + + ++
Sbjct: 113 ---MRVAVAREVDELETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVA 169
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 170 PGIAEALVATAMGLFAA 186
>gi|171915544|ref|ZP_02931014.1| MotA/TolQ/ExbB proton channel family protein [Verrucomicrobium
spinosum DSM 4136]
Length = 269
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
E + EI +S +G P IG+VG + G++ A L P L
Sbjct: 130 EEGVIAEIMKENSRMQTFISYLSVIGVCTPMIGLVGTVTGMMGAFATLGTSGIGDPSQLS 189
Query: 200 TAIGVSLTGTLLGIILS 216
IG L T G+ ++
Sbjct: 190 AHIGEVLVATASGLFVA 206
>gi|153008546|ref|YP_001369761.1| Tol-Pal system TolQ [Ochrobactrum anthropi ATCC 49188]
gi|151560434|gb|ABS13932.1| Tol-Pal system TolQ [Ochrobactrum anthropi ATCC 49188]
Length = 236
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + + ++ +G + P IG+ G ++GI+ + + + S
Sbjct: 112 QMRIDKAMDVALARESEKLDSRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLLAA 192
>gi|91788912|ref|YP_549864.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
gi|91698137|gb|ABE44966.1| outer membrane transport energization protein ExbB [Polaromonas sp.
JS666]
Length = 238
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 11/129 (8%)
Query: 92 GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEI 151
+ +P+ L + + D + S + + I
Sbjct: 64 AGLTKLGADPTNPFRQLALEGREATLHHRNTKAHLHDAL-------DVSDWVTRTLRNTI 116
Query: 152 DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLT 207
D ++ +G + P IG+ G + GI A+ ++ + + IG SL
Sbjct: 117 DEFTARLQSGLAVLASVGSTAPFIGLFGTVWGIYHALLSIGAAGQATIDKVAGPIGESLI 176
Query: 208 GTLLGIILS 216
T LG+ ++
Sbjct: 177 MTALGLAVA 185
>gi|320334859|ref|YP_004171570.1| MotA/TolQ/ExbB proton channel [Deinococcus maricopensis DSM 21211]
gi|319756148|gb|ADV67905.1| MotA/TolQ/ExbB proton channel [Deinococcus maricopensis DSM 21211]
Length = 222
Score = 38.7 bits (89), Expect = 0.89, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
+ M++ + A+ + + P +G++G + G++++ SQ +P L
Sbjct: 93 QAAMNDAVLAEDARLYAGLTALGTVAQIAPLLGLLGTVFGMVRSFLVFSQTTAPTPTQLA 152
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQV 256
T I +L T G+I++ L + +++ + V++ A+++ +PQV
Sbjct: 153 TGISEALVNTAGGLIVA-ILAYVARNALRARADRIAVSAERVREVFPAWLSAPVPQV 208
>gi|262193461|ref|YP_003264670.1| protein TolQ [Haliangium ochraceum DSM 14365]
gi|262076808|gb|ACY12777.1| protein TolQ [Haliangium ochraceum DSM 14365]
Length = 232
Score = 38.7 bits (89), Expect = 0.89, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 46/139 (33%), Gaps = 10/139 (7%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
L + + NS I L + R A
Sbjct: 61 KFLESFWRTRDIEQIYKQAKGLQNSPISAMF---LAGYTELAKLEADERPTRDKEADLEN 117
Query: 143 IENLMD--EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK---I 197
+E + + I+ E + P+ ++ G + P IG+ G + GI+ + +L
Sbjct: 118 VERALRRTQTIETTKLENMIPF--LATTGSAAPFIGLFGTVWGIMNSFTSLGSGAANIQT 175
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 176 VAPGIAEALFATAIGLVAA 194
>gi|51246826|ref|YP_066710.1| transport protein TolQ [Desulfotalea psychrophila LSv54]
gi|50877863|emb|CAG37703.1| related to transport protein TolQ [Desulfotalea psychrophila LSv54]
Length = 463
Score = 38.7 bits (89), Expect = 0.89, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ P +G++G + G+I + + P+++ T I +L T G+ ++ L
Sbjct: 376 LASIAPLLGLLGTVTGMINTFQAITIFGTGDPRMMSTGISEALVTTQAGLGIAIPLLL 433
>gi|264679474|ref|YP_003279381.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|299530556|ref|ZP_07043976.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|262209987|gb|ACY34085.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|298721532|gb|EFI62469.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 234
Score = 38.7 bits (89), Expect = 0.89, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILG 199
M L E + + P +G+ G + G++ A N+ Q + +
Sbjct: 111 RRAMRASFQRELDEIESGLSFLGTVASVSPYVGLFGTVWGVMHAFTGFANMEQITLATVA 170
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 PGIAEALVATAMGLFAA 187
>gi|217969216|ref|YP_002354450.1| protein TolQ [Thauera sp. MZ1T]
gi|217506543|gb|ACK53554.1| protein TolQ [Thauera sp. MZ1T]
Length = 222
Score = 38.7 bits (89), Expect = 0.89, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
M + + ++ +G P IG++G + GI+ + LS + +
Sbjct: 109 RRAMRATYQREIDDLEAHLAFLASVGSVSPYIGLLGTVWGIMNSFRGLSSVGAATLAQVA 168
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 169 PGIAEALVATAIGLFAA 185
>gi|268595270|ref|ZP_06129437.1| biopolymer transporter exbB [Neisseria gonorrhoeae 35/02]
gi|268597397|ref|ZP_06131564.1| biopolymer transporter exbB [Neisseria gonorrhoeae FA19]
gi|291043325|ref|ZP_06569048.1| biopolymer transporter exbB [Neisseria gonorrhoeae DGI2]
gi|293398636|ref|ZP_06642814.1| biopolymer transporter ExbB [Neisseria gonorrhoeae F62]
gi|268548659|gb|EEZ44077.1| biopolymer transporter exbB [Neisseria gonorrhoeae 35/02]
gi|268551185|gb|EEZ46204.1| biopolymer transporter exbB [Neisseria gonorrhoeae FA19]
gi|291012931|gb|EFE04914.1| biopolymer transporter exbB [Neisseria gonorrhoeae DGI2]
gi|291611107|gb|EFF40204.1| biopolymer transporter ExbB [Neisseria gonorrhoeae F62]
Length = 230
Score = 38.7 bits (89), Expect = 0.90, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 136 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 192
>gi|258646833|ref|ZP_05734302.1| domain protein, MotA/TolQ/ExbB proton channel family [Dialister
invisus DSM 15470]
gi|260404270|gb|EEW97817.1| domain protein, MotA/TolQ/ExbB proton channel family [Dialister
invisus DSM 15470]
Length = 237
Score = 38.7 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---QSPKILG 199
+E++ E+ D L + + + P +G++G I G++ +++ Q+ +
Sbjct: 126 LESVTYEKTDRYLNQLSAHLDYLGVIIGLSPMLGLLGTITGMMGTFSSMTGQLQNTAGVT 185
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
+ +L T+ G++++ + + + + + K V ALI+ ++G
Sbjct: 186 AGLAEALITTIFGLVIAITGML-VHAYLNTRYKKATLDLDAVADALISGLSGK 237
>gi|269798755|ref|YP_003312655.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|269095384|gb|ACZ25375.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
Length = 203
Score = 38.7 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 102 DDPYNSTI-FTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
D S I + S+ T LE+ I + +++ +++ M++ + + +
Sbjct: 48 DALEESEINWQSLLTTLESKHTAN-ISYNLPLVLGQCQDRNVLQSKMEDMVAHVYTHASR 106
Query: 161 PYHAISHMGESLPAIGIVGAILGII---KAMGNLSQSPKILGTAIGVSLTGTLLGIILS 216
+S + P +G++G + G+I + G P + +G +L T G+ ++
Sbjct: 107 GLDWLSTIVTMAPLLGLLGTVTGMIGAFQVFGADGAVPTAITGGVGEALIATASGLCVA 165
>gi|149375218|ref|ZP_01892990.1| Biopolymer transport protein [Marinobacter algicola DG893]
gi|149360582|gb|EDM49034.1| Biopolymer transport protein [Marinobacter algicola DG893]
Length = 214
Score = 38.7 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
++ N ++E M+E + +L K ++ + +G++G I+G+I A +
Sbjct: 86 LLNNHPREDVEYAMEEGLMEVLPRLEKRTQYLATLANIATLLGLLGTIIGLIAAFTAVAA 145
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
SQ +L +I V++ T G++ + L + +++ + + + L+
Sbjct: 146 ADPSQKASLLSESISVAMNTTAFGLMSAIPLLM-FHALLQTRTNEIVDSFEMAGVKLLNI 204
Query: 249 MNGAI 253
++
Sbjct: 205 ISEQP 209
>gi|331000271|ref|ZP_08323955.1| protein TolQ [Parasutterella excrementihominis YIT 11859]
gi|329572437|gb|EGG54090.1| protein TolQ [Parasutterella excrementihominis YIT 11859]
Length = 227
Score = 38.7 bits (89), Expect = 0.92, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNL-SQSPKIL 198
+ E+DI+ ++ +G P IG+ G + GI+ A +GNL S S ++
Sbjct: 118 MRARYQRELDILE----SGLSVLATIGSVSPYIGLFGTVWGIMDAFTGLGNLESASLAVV 173
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 174 APGIAEALVATAIGLFAA 191
>gi|312897627|ref|ZP_07757044.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera micronuciformis F0359]
gi|310621260|gb|EFQ04803.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera micronuciformis F0359]
Length = 207
Score = 38.7 bits (89), Expect = 0.92, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 13/174 (7%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ + + Y + +HI+ S + V E+++ R+I G
Sbjct: 31 IAIERGIYYKRNRKKSQSFFSHIEGAAKSGDWKVAEEVCEHSQTA-----ISRIIAAGLQ 85
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAI---SHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
+ E++ + + E + S + P +G++G + G+I L
Sbjct: 86 DASTEESMKSAFSEQMALESAAFQRYLDYLSAIVTVAPLLGLLGTVTGMITTFSVLDGGM 145
Query: 194 SPKILGTAIGVSLTGTLLGI---ILSYSLCNPLTSQIKSTRLKQHRLYIIVKKA 244
+ +G +L T G+ I+++++ T Q+ + RL I V
Sbjct: 146 GASAITGGVGEALVATATGLCVAIIAFAVYTFFTHQLDTIVSDTERLCITVVMG 199
>gi|162146625|ref|YP_001601084.1| protein TolQ [Gluconacetobacter diazotrophicus PAl 5]
gi|209543383|ref|YP_002275612.1| protein TolQ [Gluconacetobacter diazotrophicus PAl 5]
gi|161785200|emb|CAP54746.1| putative protein tolQ [Gluconacetobacter diazotrophicus PAl 5]
gi|209531060|gb|ACI50997.1| protein TolQ [Gluconacetobacter diazotrophicus PAl 5]
Length = 238
Score = 38.7 bits (89), Expect = 0.92, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
++ M+ I + + ++ +G P IG+ G + GI+ A G + + +
Sbjct: 118 QERVDRAMNITITREMERLGRWMIFLATIGPVAPFIGLFGTVWGIMHAFGAIAAMHNTNL 177
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 178 AVVAPGISEALFATAIGLVTA 198
>gi|313607016|gb|EFR83567.1| rod shape-determining protein RodA [Listeria monocytogenes FSL
F2-208]
Length = 389
Score = 38.7 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 5 IGLFITILCIIGGFY-AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV--SL 61
+G + + II G G IL+ F + + G L VM NP + K
Sbjct: 168 LGTILVFIAIIVGMVFLSGVTWKILLPVFSSIALLGGTLIYLVMYNPDFLQKLGFKTYQF 227
Query: 62 LEIFGYKALGQDTYCDVLKLLYIL 85
I + +D D ++LL +
Sbjct: 228 KRITSWLRPEEDPLGDGMQLLRSM 251
>gi|260177181|gb|ACX33905.1| putative MotA/TolQ/ExbB proton channel [uncultured prokaryote AT3]
Length = 245
Score = 38.7 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
++ VG + + ++ +D+ ++ G + P IG+ G + GI A+ N
Sbjct: 100 KLAAVGGSGEFMTR-VLRNGVDMEAARVESGLTVLASAGSAAPYIGLFGTVWGIYHALVN 158
Query: 191 LS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + + +G +L T LG+ ++
Sbjct: 159 IGLSGQGTLDKVAGPVGEALIMTALGLAVA 188
>gi|319944465|ref|ZP_08018739.1| TonB family auxiliary protein ExbB [Lautropia mirabilis ATCC 51599]
gi|319742426|gb|EFV94839.1| TonB family auxiliary protein ExbB [Lautropia mirabilis ATCC 51599]
Length = 244
Score = 38.7 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+ + + + + +D ++ +G + P G+ G + G+ A+ N+
Sbjct: 104 MADAGTAADLLTRTIKKVLDEETVRLENGLSVLATVGATAPFFGLFGTVWGVYHALVNIG 163
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
S S + +G +L T LG+ ++
Sbjct: 164 LSGSGSLDKVAGPVGEALIMTGLGLAVA 191
>gi|217963472|ref|YP_002349150.1| rod shape-determining protein RodA [Listeria monocytogenes HCC23]
gi|290893695|ref|ZP_06556676.1| cell division protein [Listeria monocytogenes FSL J2-071]
gi|217332742|gb|ACK38536.1| rod shape-determining protein RodA [Listeria monocytogenes HCC23]
gi|290556768|gb|EFD90301.1| cell division protein [Listeria monocytogenes FSL J2-071]
gi|307571954|emb|CAR85133.1| cell division protein, FtsW/RodA/SpoVE family [Listeria
monocytogenes L99]
Length = 389
Score = 38.7 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 5 IGLFITILCIIGGFY-AMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGV--SL 61
+G + + II G G IL+ F + + G L VM NP + K
Sbjct: 168 LGTILVFIAIIVGMVFLSGVTWKILLPVFSSIALLGGTLIYLVMYNPDFLQKLGFKTYQF 227
Query: 62 LEIFGYKALGQDTYCDVLKLLYIL 85
I + +D D ++LL +
Sbjct: 228 KRITSWLRPEEDPLGDGMQLLRSM 251
>gi|296123995|ref|YP_003631773.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296016335|gb|ADG69574.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 268
Score = 38.7 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 57/149 (38%), Gaps = 14/149 (9%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLE-----NNELTTFICDYMRM 132
++ + L L+ + E+ +++ + ++EL + + +
Sbjct: 80 LVAKITQLFMRLRPQNIMP-EDLLEEWGEMLNKRDYQGIYRTAKESDSELGMLVANGITS 138
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII-----KA 187
+ G A + + +D +++ E K ++ +G P IG++G + G+I A
Sbjct: 139 LNGGLAEA---RDSIDRHGELVAVEMEKQISMLAVIGSLGPLIGLLGTLKGMIASFSVIA 195
Query: 188 MGNLSQSPKILGTAIGVSLTGTLLGIILS 216
M + I +L T G+ LS
Sbjct: 196 MSETQMKASEVAGGISEALLITFEGVALS 224
>gi|209573878|gb|ACI62877.1| TonB system transport protein ExbB1 [Acidithiobacillus thiooxidans]
Length = 215
Score = 38.7 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
G+AR +N +DE I + K + P +G+ G ILG+ A L+
Sbjct: 93 GSARGEAFDNRLDEAIFLTTPFLDKRLWILDTTVTLAPLLGLFGTILGMFHAFSILAAPG 152
Query: 195 --PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
P + + +L T G+ ++ + + K + +K LI ++GA
Sbjct: 153 HAPTQVTGGVADALIATASGLFIAMVGLITF-NAFNNAIDKTIQQLESIKLLLINRLDGA 211
Query: 253 I 253
Sbjct: 212 P 212
>gi|83594752|ref|YP_428504.1| periplasmic sensor Signal transduction histidine kinase
[Rhodospirillum rubrum ATCC 11170]
gi|83577666|gb|ABC24217.1| Periplasmic Sensor Signal Transduction Histidine Kinase
[Rhodospirillum rubrum ATCC 11170]
Length = 564
Score = 38.7 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 95 NETENHIDDPYNSTIFTSI--PTVLENNELTTFICDYMRMIIV---GNARSYEIENLMDE 149
ET IDDP ++ V N L T I D R+ S EI +++
Sbjct: 355 VETVARIDDPNQQKRLMAVIVDDVQRLNRLITDISDASRLDAELSRAEMESVEIRPMLEM 414
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT 200
++ E + I MG++ A+GI G +++ NL +
Sbjct: 415 LAEVHAAEAEQRGVTIKVMGDAGDALGIEGLEGRLVQVFRNLIGNAVSFSP 465
>gi|258591273|emb|CBE67570.1| TolQ protein [NC10 bacterium 'Dutch sediment']
Length = 239
Score = 38.7 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 61/199 (30%), Gaps = 33/199 (16%)
Query: 34 IVIVAGAGLGG-FVMANPLKVIKDSGV---SLLEIFGYKALGQDTYCDVLKLLYILMYNL 89
++I+ G L ++ V + L IF + + + + ++
Sbjct: 18 LLILLGFSLMSWTLIFMKFGVFRRGRRESAQFLHIFRSAKNLTTVFEESKRFTKSPVVSV 77
Query: 90 KKGSRNETENHIDD--------PYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY 141
+ E + P + +++P + E I +R +
Sbjct: 78 FQEGYRELSQLVKGGQGPAAQWPTANEPRSAVPEAPLHKEPLDLISRTLRHASMKEVAQQ 137
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----I 197
E + ++ G P +G+ G + GI+ A ++ Q+
Sbjct: 138 ERYLIF-----------------LATTGNVTPFVGLFGTVWGIMNAFASIGQAGSANLGA 180
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ + +L T G+ +
Sbjct: 181 VAPGVAEALITTAAGLGAA 199
>gi|307730981|ref|YP_003908205.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307585516|gb|ADN58914.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 239
Score = 38.7 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R+ + + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 103 ERNERVLRALRQALSASQRRLEFGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQA 162
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 163 QIESVAGPVGEALIMTAFGLVVA 185
>gi|239816090|ref|YP_002945000.1| protein TolQ [Variovorax paradoxus S110]
gi|239802667|gb|ACS19734.1| protein TolQ [Variovorax paradoxus S110]
Length = 240
Score = 38.7 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KIL 198
+ E+D ++ +G P +G+ G + GI+ A L+ +
Sbjct: 113 MRASFQRELDAAEQNL----SFLATVGSVSPYVGLFGTVWGIMHAFTGLAALAQVTLATV 168
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 169 APGIAEALVATAIGLFAA 186
>gi|172036074|ref|YP_001802575.1| putative biopolymer transport protein [Cyanothece sp. ATCC 51142]
gi|171697528|gb|ACB50509.1| putative biopolymer transport protein [Cyanothece sp. ATCC 51142]
Length = 226
Score = 38.7 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 7/85 (8%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS------ 192
M+ D + K + + P +G++G + G+I NL
Sbjct: 87 SPETFRLAMEARGDREFIQMRKGDKFLETVIAVAPLLGLLGTVTGLITTFNNLKIGEGAN 146
Query: 193 -QSPKILGTAIGVSLTGTLLGIILS 216
I +L T G+I++
Sbjct: 147 LAETSQAAAGISEALITTAAGMIVA 171
>gi|145634619|ref|ZP_01790328.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittAA]
gi|145640340|ref|ZP_01795924.1| TolQ [Haemophilus influenzae R3021]
gi|145268164|gb|EDK08159.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittAA]
gi|145274926|gb|EDK14788.1| TolQ [Haemophilus influenzae 22.4-21]
Length = 228
Score = 38.7 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M+ EI+ + ++ + P IG+ G + GI+ A LS + +++ I
Sbjct: 117 MNREIESLENR----VPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAIGLFAA 186
>gi|77920568|ref|YP_358383.1| TolQ protein [Pelobacter carbinolicus DSM 2380]
gi|77546651|gb|ABA90213.1| Cell division and transport-associated protein TolQ [Pelobacter
carbinolicus DSM 2380]
Length = 223
Score = 38.7 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 6/117 (5%)
Query: 104 PYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH 163
P S + N + +G A + + E+ P+
Sbjct: 70 PTASLFRDGYQEMKRNQRDNGTDEPTLFSADMGQADNVARALRRATNQETQRLERYLPF- 128
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ G + P IG+ G + GI+ + + S S ++ I +L T +G++ +
Sbjct: 129 -LATTGSTAPFIGLFGTVWGIMDSFHGIGKTGSASLAVVAPGISEALVATAIGLVAA 184
>gi|170749570|ref|YP_001755830.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
gi|170656092|gb|ACB25147.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
Length = 229
Score = 38.7 bits (89), Expect = 0.98, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
IE M + I + ++ G + P +G+ G + GI+ + ++ S +
Sbjct: 106 RIERAMKGALTIEVKRLRTGLSLLATSGSTAPFVGLFGTVWGIMNSFSSIARSQDTSLAV 165
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++++
Sbjct: 166 VAPGIAEALFATAIGLVVA 184
>gi|17545451|ref|NP_518853.1| TOLQ-like transport transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17427743|emb|CAD14262.1| probable tolq-related transport transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|299067722|emb|CBJ38931.1| Protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum CMR15]
Length = 230
Score = 38.7 bits (89), Expect = 0.98, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVS 205
+ ++ E P+ ++ +G P IG+ G + GI+ A LS + + I +
Sbjct: 125 QREMDSLESHLPF--LASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAEA 182
Query: 206 LTGTLLGIILS 216
L T +G+ +
Sbjct: 183 LVATAIGLFAA 193
>gi|310823645|ref|YP_003956003.1| adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
gi|309396717|gb|ADO74176.1| Adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
Length = 234
Score = 38.7 bits (89), Expect = 0.99, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 8/143 (5%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIF-TSIPTVLENNELTTFICDYMRMIIVGN 137
L L + +T ++ S +F + + + D +G
Sbjct: 57 LTFLDTFWKATRLEGIYQTAQGLEGSPLSKVFCAGYEELSKLAQAKE-GTDGAMSDRLGG 115
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---- 193
+ +E + + E + +G + P +G+ G ++GI+ A ++
Sbjct: 116 IEN--VERALHRAATTQITELEARVPFLGTVGAAAPFVGLFGTVIGILNAFNEIADKGNA 173
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G+ +
Sbjct: 174 TLSTVAAPVGNALFATAAGLFAA 196
>gi|301631723|ref|XP_002944946.1| PREDICTED: biopolymer transport protein exbB-like [Xenopus
(Silurana) tropicalis]
Length = 212
Score = 38.7 bits (89), Expect = 0.99, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 11/128 (8%)
Query: 93 SRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEID 152
+ + +P+ + + D + S + + ID
Sbjct: 38 GLAKLDTDPSNPFRHLALEGREATAHHRNTKGHLHDAL-------DISDWVTRCLRNCID 90
Query: 153 IILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTG 208
++ +G + P IG+ G + GI A+ + + + IG +L
Sbjct: 91 EFTARLQSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGTSGQSTIDKVAGPIGEALIM 150
Query: 209 TLLGIILS 216
T LG+ ++
Sbjct: 151 TALGLAVA 158
>gi|212693603|ref|ZP_03301731.1| hypothetical protein BACDOR_03120 [Bacteroides dorei DSM 17855]
gi|237708762|ref|ZP_04539243.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724203|ref|ZP_04554684.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265755971|ref|ZP_06090438.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|212663856|gb|EEB24430.1| hypothetical protein BACDOR_03120 [Bacteroides dorei DSM 17855]
gi|229437391|gb|EEO47468.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229457188|gb|EEO62909.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234049|gb|EEZ19650.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 257
Score = 38.7 bits (89), Expect = 0.99, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q SP ++ + V+L T+ G++
Sbjct: 155 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDKIQQAGDISPTVVAGGMKVALITTIFGLV 214
Query: 215 LS 216
++
Sbjct: 215 VA 216
>gi|291616737|ref|YP_003519479.1| TolQ [Pantoea ananatis LMG 20103]
gi|291151767|gb|ADD76351.1| TolQ [Pantoea ananatis LMG 20103]
Length = 228
Score = 38.7 bits (89), Expect = 1.00, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 112 MRISMNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 168 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|198284693|ref|YP_002221014.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665964|ref|YP_002427370.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198249214|gb|ACH84807.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518177|gb|ACK78763.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 215
Score = 38.7 bits (89), Expect = 1.00, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
G+AR +N +DE I + K + P +G+ G ILG+ A L+
Sbjct: 93 GSARGEAFDNRLDEAIFLTTPFLDKRLWILDTTVTLAPLLGLFGTILGMFHAFSILATPG 152
Query: 195 --PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGA 252
P + + +L T G+ ++ + + K + +K LI ++GA
Sbjct: 153 HAPTQVTGGVADALIATASGLFIAMVGLITF-NAFNNAIDKTIQQLESIKLLLINRLDGA 211
Query: 253 IPQV 256
++
Sbjct: 212 PNKI 215
>gi|154252566|ref|YP_001413390.1| Tol-Pal system TolQ [Parvibaculum lavamentivorans DS-1]
gi|154156516|gb|ABS63733.1| Tol-Pal system TolQ [Parvibaculum lavamentivorans DS-1]
Length = 241
Score = 38.7 bits (89), Expect = 1.00, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
++ +M I + ++ +G P IG+ G + GI+ + ++ +
Sbjct: 122 ERVDKVMQVTISREMMNLESRLLFLATVGSVAPFIGLFGTVWGIMNSFQSIAISRDTNLA 181
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 182 VVAPGIAEALFATALGLVAA 201
>gi|332290103|ref|YP_004420955.1| colicin uptake protein TolQ [Gallibacterium anatis UMN179]
gi|330432999|gb|AEC18058.1| colicin uptake protein TolQ [Gallibacterium anatis UMN179]
Length = 229
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M ++ + + ++ + P IG+ G + GI+ A LS + +++ I
Sbjct: 112 MHLAMNREIEDVENTVPFLATVASVSPYIGLFGTVWGIMHAFMALSNVKQATLQMVAPGI 171
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 172 AEALIATAIGLFAA 185
>gi|307823127|ref|ZP_07653357.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307735902|gb|EFO06749.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 288
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
R ++ + +++ ++ +G P +G+ G + GI+ A+ ++S+S
Sbjct: 129 GDRQELLDRRLRQQMQKERGALESGLAILATIGSISPFVGLFGTVWGIMGALTSISKSGS 188
Query: 197 ----ILGTAIGVSLTGTLLGIILS 216
++ IG +L T +GI ++
Sbjct: 189 ASLDVVAGPIGEALIATAVGIAVA 212
>gi|302392223|ref|YP_003828043.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
gi|302204300|gb|ADL12978.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
Length = 221
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILS- 216
+ + P +G++G ++GIIK+ L+ +P L + I +L T +G+I++
Sbjct: 108 RVLDFIASVSPLLGLLGTVIGIIKSFDILAGAQGMAAPSALSSGIAEALISTAIGLIVAI 167
Query: 217 --YSLCNPLTSQIKSTRLK----QHRLYIIVKK 243
L S++++ + RL ++ +
Sbjct: 168 PTMLFYTYLDSKVEAKMTEMQQWSTRLIEMLAE 200
>gi|301155735|emb|CBW15203.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
parainfluenzae T3T1]
Length = 228
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M+ E++ + ++ + P IG+ G + GI+ A LS + +++ I
Sbjct: 117 MNREVEALESR----VPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAIGLFAA 186
>gi|254000103|ref|YP_003052166.1| protein TolQ [Methylovorus sp. SIP3-4]
gi|313202062|ref|YP_004040720.1| protein tolq [Methylovorus sp. MP688]
gi|253986782|gb|ACT51639.1| protein TolQ [Methylovorus sp. SIP3-4]
gi|312441378|gb|ADQ85484.1| protein TolQ [Methylovorus sp. MP688]
Length = 224
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI----LGTAIGVSLTGTLLGIILSYSLC 220
++ +G P IG+ G + GI+ A LS + + I +L T +G+ +
Sbjct: 133 LASVGSVSPYIGLFGTVWGIMNAFRGLSNMAQATLSHVAPGIAEALVATAIGLFAAIPAV 192
Query: 221 NP---LTSQIKSTRLKQHRLYI 239
S + ++
Sbjct: 193 IAYNRFASAVDRLAVRYESFME 214
>gi|223939355|ref|ZP_03631234.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223891959|gb|EEF58441.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 258
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
++ ++ + K +S P IG++G + G+++ + S S +
Sbjct: 120 VKVSLERSVGTESLNLEKGMIVLSTAVAGGPFIGLLGTVWGVMETFSGVARANSASLTAM 179
Query: 199 GTAIGVSLTGTLLGIILS 216
+ +L T++G++++
Sbjct: 180 APGVAGALIATVVGLLVA 197
>gi|327393163|dbj|BAK10585.1| protein TolQ [Pantoea ananatis AJ13355]
Length = 225
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ M+ E++ + E P+ + +G P IG+ G + GI+ A L + +++
Sbjct: 109 MRISMNRELEAL--ENHIPF--LGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMV 164
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + +++ K + Y + A ++
Sbjct: 165 APGIAEALIATAIGLFAAIPAVM-AYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 218
>gi|323344517|ref|ZP_08084742.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oralis
ATCC 33269]
gi|323094644|gb|EFZ37220.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oralis
ATCC 33269]
Length = 278
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + + ++ + V+L T+ GII
Sbjct: 178 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQVQMAGDLNATVVAAGMKVALITTIFGII 237
Query: 215 LS 216
++
Sbjct: 238 VA 239
>gi|161870576|ref|YP_001599748.1| biopolymer transport protein [Neisseria meningitidis 053442]
gi|304386787|ref|ZP_07369054.1| biopolymer transporter ExbB [Neisseria meningitidis ATCC 13091]
gi|161596129|gb|ABX73789.1| biopolymer transport protein [Neisseria meningitidis 053442]
gi|304339137|gb|EFM05224.1| biopolymer transporter ExbB [Neisseria meningitidis ATCC 13091]
Length = 230
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 136 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVA 192
>gi|254247706|ref|ZP_04941027.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|124872482|gb|EAY64198.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
Length = 219
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 53 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGISRMQSG 105
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 106 LAILASVGSTAPFVGLFGTVWGIYHALLAIGATGQTSIDQVAGPVGESLIMTAFGLFVA 164
>gi|305432723|ref|ZP_07401883.1| TonB system transporter ExbB [Campylobacter coli JV20]
gi|304444232|gb|EFM36885.1| TonB system transporter ExbB [Campylobacter coli JV20]
Length = 258
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM---GNLSQSP-K 196
IE + I + ++ +G S P IG+ G + GI+ A NL +
Sbjct: 138 ERIELRLQNTISKQITASKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLA 197
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T G+I +
Sbjct: 198 VVAPGIAEALFATAFGLIAA 217
>gi|254427139|ref|ZP_05040846.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
gi|196193308|gb|EDX88267.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
Length = 224
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTL 210
E + + P +G++G + G+I A L P IL I +L T
Sbjct: 106 DELRGGLRVLEVISAIAPLLGLLGTVFGMIGAFQALETAGSQVDPSILSGGIWEALLTTA 165
Query: 211 LGIILS 216
G+ ++
Sbjct: 166 AGLTVA 171
>gi|182414163|ref|YP_001819229.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177841377|gb|ACB75629.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 221
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 55/160 (34%), Gaps = 10/160 (6%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
V++ L + E ++ I +++ + F+ + +
Sbjct: 42 VVERLLFIFRENSHREPEVVEKMLEQVEKRDIESAL---AIGRQSKDFVAKILVYTLSN- 97
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
R Y + N L + + + + P +G++G + G+++ G+++
Sbjct: 98 -REYSLSNAFIRASGQELARFGQGMATLDTVITAAPLLGLLGTVTGMMRTFGSMTGDISS 156
Query: 198 LGTAI----GVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
I +L T G+ ++ + P + + + +
Sbjct: 157 AAANITGGVAEALIATACGLAIAVTALMPY-NYLNARAEE 195
>gi|121602265|ref|YP_988485.1| protein TolQ [Bartonella bacilliformis KC583]
gi|120614442|gb|ABM45043.1| protein TolQ [Bartonella bacilliformis KC583]
Length = 235
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
IE MD I + ++ +G + P IG+ G ++GI+ + ++S S I
Sbjct: 113 RIEKAMDLAIGRESKKIESKLGYLATLGSAAPFIGLFGTVIGIMNSFLSISASQNTSLAI 172
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++++
Sbjct: 173 VAPGIAEALLATAIGLMVA 191
>gi|330502222|ref|YP_004379091.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
gi|328916508|gb|AEB57339.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
Length = 231
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 54/157 (34%), Gaps = 21/157 (13%)
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNST-----IFTSIPTVLENNELTTFICDYMRMII- 134
++ +M + + + +D+ + + N + + + R
Sbjct: 34 VISWVMIFQRSNALRAAKRALDNFEDRFWSGIDLSKLYRQAGSNPDPDSGLEQIFRAGFK 93
Query: 135 --------VGNARSYEIENLMDEEIDIILYEKLKPYHAI---SHMGESLPAIGIVGAILG 183
G ++ + I E+ K A+ + +G + P IG+ G + G
Sbjct: 94 EFSRLRQQQGVDPDAVMDGVARAMRVAISREEEKLETALPFLATVGSTSPYIGLFGTVWG 153
Query: 184 IIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
I+ + L+Q + + I +L T +G+ +
Sbjct: 154 IMNSFRGLAQVQQATLATVAPGIAEALIATAIGLFAA 190
>gi|327541185|gb|EGF27729.1| tolQ-type transport protein [Rhodopirellula baltica WH47]
Length = 305
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 47/129 (36%), Gaps = 11/129 (8%)
Query: 130 MRMIIVGNARSY-EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ +++ + +IE + + P ++ + P +G++G + G+I A
Sbjct: 143 ISAMLMRTGQPLGDIERTASDALQREADRYAGPVRWLTLAAAATPLMGLLGTVWGMIVAF 202
Query: 189 GNLS------QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
S + L I +L TL G+ ++ P + + +L+ ++
Sbjct: 203 HESSTLTADRSRSEQLSEGIYTALVTTLAGLAVA----IPAAILAQYLENRIAKLFHRIE 258
Query: 243 KALIAYMNG 251
+ G
Sbjct: 259 EMAFVIAPG 267
>gi|154246988|ref|YP_001417946.1| Tol-Pal system TolQ [Xanthobacter autotrophicus Py2]
gi|154161073|gb|ABS68289.1| Tol-Pal system TolQ [Xanthobacter autotrophicus Py2]
Length = 274
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
++ +M+ I + ++ +G + P IG+ G + GI+ + ++ + S
Sbjct: 155 QRLDKVMNVTIAREVERLESRLLVLATVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLA 214
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 215 VVAPGIAEALFATAMGLIAA 234
>gi|325579036|ref|ZP_08148992.1| TolQ colicin import protein [Haemophilus parainfluenzae ATCC 33392]
gi|325159271|gb|EGC71405.1| TolQ colicin import protein [Haemophilus parainfluenzae ATCC 33392]
Length = 228
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M+ E++ + ++ + P IG+ G + GI+ A LS + +++ I
Sbjct: 117 MNREVEALESR----VPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAIGLFAA 186
>gi|298487360|ref|ZP_07005408.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298158163|gb|EFH99235.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 255
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 23/186 (12%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL---------KLLYILMYNLKKGSRNE 96
++A+P + I+ + + LL IF G V K S +
Sbjct: 16 LLASPFESIEHAVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ 75
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE--IENLMDEEIDII 154
+ + D + + + +++ +E + ++I
Sbjct: 76 LAQEQPGAAARVALAGYAAIQ--------VPDGAQANDLSQSINHQDRLERALRQQIVRE 127
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTL 210
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T
Sbjct: 128 RRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATG 187
Query: 211 LGIILS 216
+GI ++
Sbjct: 188 VGIAVA 193
>gi|225163963|ref|ZP_03726252.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801413|gb|EEG19720.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 227
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 62/185 (33%), Gaps = 12/185 (6%)
Query: 44 GFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDD 103
F+M P + G ++ V + L++L N + + +
Sbjct: 8 AFLMGQPPLELFKHGGPIMWPIIV-VSFLAITVVVERALFLLRENAARDPKIAG-RIFER 65
Query: 104 PYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH 163
N + + V + FI + + S +++ + L +
Sbjct: 66 VENHDVEGA---VRIGEKSRDFIARILVYALTHKESS--LDDAFAQASSRELSRYQQGLA 120
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILSYS 218
+ + P +G++G + G++ G L S + +G +L T G++++
Sbjct: 121 ILDTCITAAPLLGLLGTVTGMMNTFGALGGGDIAASAGQITGGVGEALIATASGLVIAIV 180
Query: 219 LCNPL 223
+ P
Sbjct: 181 VLFPF 185
>gi|119896711|ref|YP_931924.1| translocation protein TolQ [Azoarcus sp. BH72]
gi|119669124|emb|CAL93037.1| translocation protein TolQ [Azoarcus sp. BH72]
Length = 224
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
M + + ++ +G P IG+ G + GI+ A LS + +
Sbjct: 111 RRAMRATFQREVDDLEAHLAFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVGTATLTQVA 170
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 PGIAEALVATAIGLFAA 187
>gi|226944276|ref|YP_002799349.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226719203|gb|ACO78374.1| ExbB proton channel [Azotobacter vinelandii DJ]
Length = 236
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 100 RLERALRQQIQRERRSLESGLAVVASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 159
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 160 VAGPIGAALVATGVGIAVA 178
>gi|301167927|emb|CBW27512.1| TolQ protein [Bacteriovorax marinus SJ]
Length = 230
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Query: 104 PYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH 163
P+ S + + + + + I + + +E M + + I E +
Sbjct: 78 PHKSLFTNGYLELSKLKDALGDDKEKLEQHITKHGLQF-LERGMKKGVHEINIELERFLA 136
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSPKIL---GTAIGVSLTGTLLGIILS 216
++ +G P +G+ G + GII + L+ L I +L T +G++ +
Sbjct: 137 TLASIGSVTPFVGLFGTVWGIIGSFTGLAGGGATLDAVAPGIAEALVATAVGLVAA 192
>gi|104783070|ref|YP_609568.1| biopolymer transport protein TolQ [Pseudomonas entomophila L48]
gi|95112057|emb|CAK16784.1| biopolymer transport protein TolQ [Pseudomonas entomophila L48]
Length = 231
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M I + + ++ +G + P IG+ G + GI+ + L+ + + I
Sbjct: 117 MRVAISREEEKLEQSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALVATAIGLFAA 190
>gi|86359057|ref|YP_470949.1| protein transporter protein [Rhizobium etli CFN 42]
gi|218672504|ref|ZP_03522173.1| protein transporter protein [Rhizobium etli GR56]
gi|86283159|gb|ABC92222.1| protein transporter protein [Rhizobium etli CFN 42]
gi|327193470|gb|EGE60366.1| protein transporter protein [Rhizobium etli CNPAF512]
Length = 239
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 112 QMRIDRAMDVTLARETEYLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNL 171
Query: 196 KILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
++ I +L T +G+ +++Y+ + ++ + + +
Sbjct: 172 AVVAPGIAEALLATAIGLVAAIPAVIAYNKFSADAGKLSARMEGFADEFSAIL 224
>gi|66045528|ref|YP_235369.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63256235|gb|AAY37331.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 255
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 74/187 (39%), Gaps = 25/187 (13%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPY 105
++A+P + I+ + + LL IF G + L + LK R H
Sbjct: 16 LIASPFESIEHAVIWLLVIFSVATWG------LALLKGVQFSRLKSQDRK---FHKQFWA 66
Query: 106 NSTIFTSIPTVLENN--ELTTFICDYMRMIIVGNARSYEI----------ENLMDEEIDI 153
S++ ++ E + Y + + A+++++ E + ++I
Sbjct: 67 ASSLDSAAQLAHEQPGAAARVALAGYAAIQVADGAQAHDLSQSINHQDRLERALRQQIVR 126
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGT 209
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T
Sbjct: 127 ERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVAT 186
Query: 210 LLGIILS 216
+GI ++
Sbjct: 187 GVGIAVA 193
>gi|49474674|ref|YP_032716.1| inner membrane tolQ protein [Bartonella quintana str. Toulouse]
gi|49240178|emb|CAF26644.1| Inner membrane tolQ protein [Bartonella quintana str. Toulouse]
Length = 237
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KI 197
I+ MD + + ++ +G + P IG++G ++G++ + ++S S I
Sbjct: 113 RIDKAMDLTLGRESAKIESKLSFLATLGSAGPFIGLLGTVIGVMGSFLSISASQNTSLAI 172
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 173 VAPGIAEALLATAIGLFAA 191
>gi|325274577|ref|ZP_08140635.1| protein TolQ [Pseudomonas sp. TJI-51]
gi|324100304|gb|EGB98092.1| protein TolQ [Pseudomonas sp. TJI-51]
Length = 231
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M I + + ++ +G + P IG+ G + GI+ + L+ + + I
Sbjct: 117 MRVAISREEEKLEQSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALVATAIGLFAA 190
>gi|308270223|emb|CBX26835.1| hypothetical protein N47_A08640 [uncultured Desulfobacterium sp.]
Length = 212
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 99 NHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK 158
+ + S + + +L+ + T I +R + + ++ E I E
Sbjct: 52 EEVKKYFESNSSSEMENILQQSN--TPITRIIRAGLGSLTEKESMMEAIEAEKIITRMEI 109
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---SQSPKILGTAIGVSLTGTLLGIIL 215
+ + +G + P IG+ G +LGII +L Q + + I +L T +G+ +
Sbjct: 110 ERRLAFLGTLGTNAPFIGLFGTVLGIIHTFKDLAISGQGGTSVISGISEALIATGVGLWV 169
Query: 216 S 216
+
Sbjct: 170 A 170
>gi|253990989|ref|YP_003042345.1| biopolymer transport exbb protein [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782439|emb|CAQ85603.1| biopolymer transport exbb protein [Photorhabdus asymbiotica]
Length = 386
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAI 202
++ + I + ++ +G P +G+ G + GI+ + + + + ++ I
Sbjct: 269 LERSVAAISRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGI 328
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 329 AEALLATALGLVAA 342
>gi|78224720|ref|YP_386467.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
gi|78195975|gb|ABB33742.1| Cell division and transport-associated protein TolQ [Geobacter
metallireducens GS-15]
Length = 224
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 7/141 (4%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSI-PTVLENNELTTFICDYMRMIIVGNARS- 140
L + K + + +D NS + E L + ++
Sbjct: 45 RFLDFFWKTKRFDAVNSQLDRFTNSPLTVLFSEGYSELKRLVEKGDQKEELDVMSTELGG 104
Query: 141 -YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP---- 195
I + + K ++ G + P IG+ G + GI+ A + ++
Sbjct: 105 IENIARALRRATTSEITRLEKYVTFLATTGSTTPFIGLFGTVWGIMTAFKGIGETGSASL 164
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 165 AVVAPGISEALIATAIGLVAA 185
>gi|95931354|ref|ZP_01314067.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95132597|gb|EAT14283.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 184
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGT 200
+++DE + + + I + P +G++G ++G+I ++ + + + +
Sbjct: 71 HIVDEASMAVSHPLERGLTLIGVLAAIAPLLGLLGTVVGMIATFNSIAVFGTGNARAMAG 130
Query: 201 AIGVSLTGTLLGIILS 216
I +L T G++++
Sbjct: 131 GISEALITTQTGLLIA 146
>gi|322514839|ref|ZP_08067858.1| TolQ colicin import protein [Actinobacillus ureae ATCC 25976]
gi|322119221|gb|EFX91362.1| TolQ colicin import protein [Actinobacillus ureae ATCC 25976]
Length = 226
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+YMR+ V M+ ++ + + +G P IG+ G +
Sbjct: 88 FKEYMRLQQVNADAPEATMKGSSRAMNLALNREIENLESYIPFLGTVGSISPYIGLFGTV 147
Query: 182 LGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
GI+ + LS + + + I +L T +G+ +
Sbjct: 148 WGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLFAA 186
>gi|254420281|ref|ZP_05034005.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
gi|196186458|gb|EDX81434.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
Length = 576
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI----L 198
I + +D + K ++ P IG++G +LG++ +++ + ++ +
Sbjct: 452 IRSALDAGQVRESQKLNKWMVLLTIAISGGPFIGLLGTVLGVMITFASVAAAGEVNINAI 511
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T+ G+ ++
Sbjct: 512 APGIAAALLATVAGLAVA 529
>gi|152981742|ref|YP_001354271.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
gi|151281819|gb|ABR90229.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
Length = 203
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 131 RMIIVGNARSYEIENLMDEEIDI----ILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G ++M E I+ + + + + P +G+ G ++G+I+
Sbjct: 72 RVLAAGLRNVDAPRDVMKESIEEAGRGTAHTLERFLTTLGTIATLAPLMGLFGTVVGMIE 131
Query: 187 AMGN-----LSQSPKILGTAIGVSLTGTLLGIILS 216
G+ +P L I ++L T G+ ++
Sbjct: 132 IFGSQNATGTGANPAQLAHGISIALYNTGFGLAIA 166
>gi|303258200|ref|ZP_07344207.1| protein TolQ [Burkholderiales bacterium 1_1_47]
gi|302858953|gb|EFL82037.1| protein TolQ [Burkholderiales bacterium 1_1_47]
Length = 228
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNL-SQSPKIL 198
+ E+DI+ ++ +G P IG+ G + GI+ A +GNL S S ++
Sbjct: 119 MRARYQRELDILE----SGLSVLATIGSVSPYIGLFGTVWGIMDAFTGLGNLESASLAVV 174
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 175 APGIAEALVATAIGLFAA 192
>gi|242310684|ref|ZP_04809839.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239523082|gb|EEQ62948.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 190
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 46/120 (38%), Gaps = 5/120 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+G E+++ I+ + + + + + P IG+ G ++ I++A L
Sbjct: 70 LGKIDKKPTESMLQYSINKAIKDSTAGLTFLGIVASTAPFIGLFGTVVEILEAFSKLGMD 129
Query: 195 PK----ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
K ++ I +L T GI+ + + +K + + + L++ N
Sbjct: 130 SKATLDVIAPVISKALIATAAGILTAIPAYS-FNLVLKRKVFELNTYLQLQINVLMSSKN 188
>gi|149369625|ref|ZP_01889477.1| MotA/TolQ/ExbB proton channel family protein [unidentified
eubacterium SCB49]
gi|149357052|gb|EDM45607.1| MotA/TolQ/ExbB proton channel family protein [unidentified
eubacterium SCB49]
Length = 267
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
+ K +S P +G +G ++G+I+A + +P ++ I V+L T+ G
Sbjct: 165 QLEKNVSWVSLFIALAPMLGFMGTVIGMIQAFDKIAAAGDMNPSLVAGGIKVALLTTVFG 224
Query: 213 IILS 216
+I++
Sbjct: 225 LIVA 228
>gi|134296384|ref|YP_001120119.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134139541|gb|ABO55284.1| outer membrane transport energization protein ExbB [Burkholderia
vietnamiensis G4]
Length = 243
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGISRMQAG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|91788751|ref|YP_549703.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
gi|91697976|gb|ABE44805.1| Cell division and transport-associated protein TolQ [Polaromonas
sp. JS666]
Length = 230
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ E+D I ++ +G P +G+ G + GI+ A L+ + +
Sbjct: 113 MRASYQRELDAIE----VNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLAALEQVTLATV 168
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 169 APGIAEALVATAIGLFAA 186
>gi|107028621|ref|YP_625716.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116690220|ref|YP_835843.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|170733560|ref|YP_001765507.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|206560652|ref|YP_002231417.1| putative bipolymer transport protein [Burkholderia cenocepacia
J2315]
gi|105897785|gb|ABF80743.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia AU 1054]
gi|116648309|gb|ABK08950.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia HI2424]
gi|169816802|gb|ACA91385.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|198036694|emb|CAR52593.1| putative bipolymer transport protein [Burkholderia cenocepacia
J2315]
Length = 244
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGISRMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASVGSTAPFVGLFGTVWGIYHALLAIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|254491815|ref|ZP_05104994.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463293|gb|EEF79563.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 218
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYE----KLKPYHAISHMGESLPAIGIVGAILGIIK 186
+++ G + E I+ I + + + + P IG++G ++G+IK
Sbjct: 72 QILASGLINRNSSREITKESIEDIGRHVTVALERNLNTLGTVAAISPLIGLLGTVIGMIK 131
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +P+ L I +L T G++++
Sbjct: 132 VFAVITAEGVGNPETLAGGISEALITTATGLVVA 165
>gi|197106550|ref|YP_002131927.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
gi|196479970|gb|ACG79498.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
Length = 404
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
I+ +D I A++ + + P IG+ G + GI+ + + + S
Sbjct: 285 QRIDRHLDAVIARESARVENGLGALAIVATASPFIGLFGTVWGIMNSFQAIAIQKNTSLA 344
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ AI +L T +G++ +
Sbjct: 345 VVAPAIAEALFATAIGLVAA 364
>gi|163845249|ref|YP_001622904.1| hypothetical protein BSUIS_B1144 [Brucella suis ATCC 23445]
gi|163675972|gb|ABY40082.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 307
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G + + + K ++ +G P +G+ G + GI+ + N+S+
Sbjct: 171 GEGLKERVASHLSRIEAKAGRRLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQ 230
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 231 TTNLAVVAPGIAEALLATAIGLVAA 255
>gi|21673465|ref|NP_661530.1| ExbB/TolQ family protein [Chlorobium tepidum TLS]
gi|21646569|gb|AAM71872.1| ExbB/TolQ family protein [Chlorobium tepidum TLS]
Length = 219
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 54/148 (36%), Gaps = 9/148 (6%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM--IIV 135
++ + + S++ ++ D +F + ++ F Y+ +
Sbjct: 37 IIAWKFGFVRKSMNESQDFLDSFFDLRNADKLFAASENYRNSSLARVFRAGYIEYSGMRD 96
Query: 136 GNARSYEIENLM---DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
S E +M E++ ++ +G + P IG+ G + GI+ + N+
Sbjct: 97 RATASNVKERIMLAVKREVNAESKRLTHMVPFLATVGNTAPFIGLFGTVWGIMSSFQNIG 156
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
S S + I +L T G++ +
Sbjct: 157 LMKSASLAAVAPGISEALVATATGLVAA 184
>gi|46143832|ref|ZP_00133961.2| COG0811: Biopolymer transport proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207784|ref|YP_001053009.1| colicin transport protein TolQ [Actinobacillus pleuropneumoniae
L20]
gi|307245113|ref|ZP_07527206.1| hypothetical protein appser1_3230 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307249516|ref|ZP_07531503.1| hypothetical protein appser4_3270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307254069|ref|ZP_07535916.1| hypothetical protein appser9_3240 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258524|ref|ZP_07540261.1| hypothetical protein appser11_3250 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|126096576|gb|ABN73404.1| colicin transport protein TolQ [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306854002|gb|EFM86214.1| hypothetical protein appser1_3230 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306858371|gb|EFM90440.1| hypothetical protein appser4_3270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306862994|gb|EFM94941.1| hypothetical protein appser9_3240 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867428|gb|EFM99279.1| hypothetical protein appser11_3250 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 226
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+YMR+ V M+ ++ + + +G P IG+ G +
Sbjct: 88 FKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVENLESYIPFLGTVGSISPYIGLFGTV 147
Query: 182 LGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
GI+ + LS + + + I +L T +G+ +
Sbjct: 148 WGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLFAA 186
>gi|311694929|gb|ADP97802.1| MotA/TolQ/ExbB proton channel [marine bacterium HP15]
Length = 229
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 50/152 (32%), Gaps = 15/152 (9%)
Query: 80 KLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE----LTTFICDYMRMIIV 135
L++ + +K R + + V + + + +
Sbjct: 34 ALIFQRLQVFRKAKRAQLAFEERFWSGMDLGQLYREVNADPTPFSGMESLFRAGFKEFSR 93
Query: 136 GNARSYEIENLMDEEIDII-------LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+S + + +M+ + ++ +G + P +G+ G + GI+ +
Sbjct: 94 LRQQSRDADAVMEGTQRAMRVAFSREHERLEASLPFLATVGSTSPYVGLFGTVWGIMNSF 153
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
L+Q + + I +L T +G+ +
Sbjct: 154 RGLAQVQQATLATVAPGISEALIATAMGLFAA 185
>gi|88810579|ref|ZP_01125836.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
gi|88792209|gb|EAR23319.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
Length = 262
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 10/126 (7%)
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIV 178
+ + + I G RS E + EE+ + ++L+ + + + P +G+
Sbjct: 87 RNPVAQVLALAIRGRRRSELSEARVREEVVRVAADQLEALRSYFRPLEVIASLAPLLGLF 146
Query: 179 GAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
G +LG+I A L Q P IL I +L T +G+ ++ + + + ++ +
Sbjct: 147 GTVLGMITAFQQLQQAGNQVDPAILSGGIWEALLTTAVGLGVAIPVVVVI-NWLERKIDR 205
Query: 234 QHRLYI 239
Sbjct: 206 LAHEMQ 211
>gi|52424775|ref|YP_087912.1| TolQ protein [Mannheimia succiniciproducens MBEL55E]
gi|52306827|gb|AAU37327.1| TolQ protein [Mannheimia succiniciproducens MBEL55E]
Length = 228
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M+ ++ + E ++ + P IG+ G + GI+ A LS + +++ I
Sbjct: 113 MNLTMNREIEELEGRIPFLATVASISPYIGLFGTVWGIMHAFMGLSGAKQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAIGLFAA 186
>gi|313206421|ref|YP_004045598.1| outer membrane transport energization protein exbb [Riemerella
anatipestifer DSM 15868]
gi|312445737|gb|ADQ82092.1| outer membrane transport energization protein ExbB [Riemerella
anatipestifer DSM 15868]
gi|325336135|gb|ADZ12409.1| ExbD5 [Riemerella anatipestifer RA-GD]
Length = 226
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPK 196
+I N M + ++ + + K + ++ + P +G +G ++G+I A +S SPK
Sbjct: 111 DISNAMQSQGNLEVSKLEKNLNLLASASGAAPMLGFLGTVIGMIMAFFEISNVTGAVSPK 170
Query: 197 ILGTAIGVSLTGTLLGIIL---SYSLCNPLTSQIKSTRLK 233
+L + I ++ T G+ + +Y N L +++ LK
Sbjct: 171 LLASGIYTAMATTAAGLFVGIPAYFFYNILVTKVDRLVLK 210
>gi|296284897|ref|ZP_06862895.1| biopolymer transport ExbB protein [Citromicrobium bathyomarinum
JL354]
Length = 248
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+ + + D I+ ++ +G + P +G++G ++GI +A+ N+
Sbjct: 106 MTDSMEAHDWMHGSLARSQDAIMSRLNGGLAFLATVGATAPFVGLLGTVIGIYRALINIG 165
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
S S + +G +L T +G++++
Sbjct: 166 LAGSASIDKVAGPVGEALIMTAIGLLVA 193
>gi|315126273|ref|YP_004068276.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas sp. SM9913]
gi|315014787|gb|ADT68125.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas sp. SM9913]
Length = 204
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + + ++ +G P IG+ G + GI+ A L + + +++ I
Sbjct: 83 MRVALSREIEKLESSLSFLATVGSISPYIGLFGTVWGIMNAFIALGEVKQATLQMVAPGI 142
Query: 203 GVSLTGTLLGIILSYSLCNP---LTSQIKSTRLKQHRLYI 239
+L T +G+ + ++++
Sbjct: 143 AEALIATAMGLFAAIPAVIAYNRFANKVEKLESHYINFME 182
>gi|198276972|ref|ZP_03209503.1| hypothetical protein BACPLE_03178 [Bacteroides plebeius DSM 17135]
gi|198270497|gb|EDY94767.1| hypothetical protein BACPLE_03178 [Bacteroides plebeius DSM 17135]
Length = 266
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q SP ++ + V+L T+ G+I
Sbjct: 164 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDQIQQAGDISPTVVAGGMKVALITTIFGLI 223
Query: 215 LS 216
++
Sbjct: 224 VA 225
>gi|145630444|ref|ZP_01786225.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae R3021]
gi|144984179|gb|EDJ91616.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae R3021]
Length = 228
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 128 DYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
D II G R+ + M+ EI+ + ++ + P IG+ G + GI+ A
Sbjct: 100 DAPEAIIKGTMRAMNL--AMNREIESLENR----VPFLATVASVSPYIGLFGTVWGIMHA 153
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
LS + +++ I +L T +G+ +
Sbjct: 154 FMALSGAKQATLQMVAPGIAEALIATAIGLFAA 186
>gi|94265096|ref|ZP_01288862.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93454426|gb|EAT04721.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 211
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 36/113 (31%), Gaps = 15/113 (13%)
Query: 139 RSYEIENLMDEEI---DIILYEKLKPYHAI--SHMGESLPAIGIVGAILGIIKAMGNLS- 192
+ +D I ++ + P +G++G + G+I+ L
Sbjct: 81 PPVLRRSWLDARIHRKEVSRLRHRLGNSLFLIRTLIMLCPLLGLLGTVTGMIQVFDVLGF 140
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILS---YSLCNPL---TSQIKSTRLKQHR 236
P+ + + + T+ G++++ Y L + + R
Sbjct: 141 SGTGDPRAMAAGVSRATIPTMAGLVVAISGYFFSINLQRSADGLARRAAESLR 193
>gi|16272333|ref|NP_438546.1| colicin transport protein [Haemophilus influenzae Rd KW20]
gi|68248988|ref|YP_248100.1| hypothetical protein NTHI0505 [Haemophilus influenzae 86-028NP]
gi|145628745|ref|ZP_01784545.1| TolQ [Haemophilus influenzae 22.1-21]
gi|145636347|ref|ZP_01792016.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittHH]
gi|148825333|ref|YP_001290086.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittEE]
gi|229844452|ref|ZP_04464592.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 6P18H1]
gi|229846472|ref|ZP_04466580.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 7P49H1]
gi|260580552|ref|ZP_05848380.1| TolQ protein [Haemophilus influenzae RdAW]
gi|260582351|ref|ZP_05850144.1| TolQ protein [Haemophilus influenzae NT127]
gi|319775686|ref|YP_004138174.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae F3047]
gi|319898093|ref|YP_004136290.1| membrane spanning protein in tola-tolq-tolr complex [Haemophilus
influenzae F3031]
gi|329122260|ref|ZP_08250848.1| TolQ colicin import protein [Haemophilus aegyptius ATCC 11116]
gi|1174730|sp|P43768|TOLQ_HAEIN RecName: Full=Protein tolQ
gi|1573355|gb|AAC22043.1| colicin transport protein (tolQ) [Haemophilus influenzae Rd KW20]
gi|68057187|gb|AAX87440.1| TolQ [Haemophilus influenzae 86-028NP]
gi|144979215|gb|EDJ88901.1| TolQ [Haemophilus influenzae 22.1-21]
gi|145270512|gb|EDK10446.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittHH]
gi|148715493|gb|ABQ97703.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittEE]
gi|229810565|gb|EEP46283.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 7P49H1]
gi|229812701|gb|EEP48390.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 6P18H1]
gi|260092894|gb|EEW76829.1| TolQ protein [Haemophilus influenzae RdAW]
gi|260094719|gb|EEW78614.1| TolQ protein [Haemophilus influenzae NT127]
gi|301169087|emb|CBW28684.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae 10810]
gi|317433599|emb|CBY81983.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae F3031]
gi|317450277|emb|CBY86493.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae F3047]
gi|327473821|gb|EGF19238.1| TolQ colicin import protein [Haemophilus aegyptius ATCC 11116]
Length = 228
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 128 DYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
D II G R+ + M+ EI+ + ++ + P IG+ G + GI+ A
Sbjct: 100 DAPEAIIKGTMRAMNL--AMNREIESLENR----VPFLATVASVSPYIGLFGTVWGIMHA 153
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
LS + +++ I +L T +G+ +
Sbjct: 154 FMALSGAKQATLQMVAPGIAEALIATAIGLFAA 186
>gi|189426519|ref|YP_001953696.1| protein TolQ [Geobacter lovleyi SZ]
gi|189422778|gb|ACD97176.1| protein TolQ [Geobacter lovleyi SZ]
Length = 227
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 27/201 (13%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTI 109
+I + + F D + K + + +D +S +
Sbjct: 28 SWAIIMFKFFQIHKAFSESGRFMDFF-------------WKTKRFDSISSQVDRFASSPL 74
Query: 110 ---FTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
F + L+ + + + + ++ + K ++
Sbjct: 75 TALFNEGYSELKQLMEAEGVKPDHGGVSTDLGGVANVSRALRRATNLEVNRLEKYTTFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNP 222
G + P IG+ G + GI+ A + S S ++ I +L T +G++ +
Sbjct: 135 TTGSTSPFIGLFGTVWGIMVAFEGIGKTGSASLAVVAPGIAEALIATAVGLVAAIPAVM- 193
Query: 223 LTSQIKSTRLKQHRLYIIVKK 243
+ QH++ ++VK+
Sbjct: 194 ------AYNHFQHKIRVLVKE 208
>gi|86131606|ref|ZP_01050204.1| biopolymer transport protein [Dokdonia donghaensis MED134]
gi|85818051|gb|EAQ39219.1| biopolymer transport protein [Dokdonia donghaensis MED134]
Length = 264
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
+ K +S P +G +G ++G+I+A + +P ++ I V+L T+ G
Sbjct: 164 QLEKNVSWVSLFIALAPMLGFMGTVIGMIQAFDRIEAAGDMNPALVAGGIKVALLTTVFG 223
Query: 213 IILS 216
+I++
Sbjct: 224 LIVA 227
>gi|317152292|ref|YP_004120340.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316942543|gb|ADU61594.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 206
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---- 193
+++D + ++ I + P +G++G + G+I +S+
Sbjct: 87 DDPELNRDMLDAMRMRQEIKAMRYIGTILLLSAVAPLLGLLGTVTGMITTFDVISELGTG 146
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+ + L + I +L T G++++
Sbjct: 147 NARALASGISEALVTTQSGLVVA 169
>gi|222112434|ref|YP_002554698.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|221731878|gb|ACM34698.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 222
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 83/213 (38%), Gaps = 28/213 (13%)
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
SL + A+ Q + +L + + R H+D P ++ F P++
Sbjct: 3 SLHWLRQGDAVTQASALLLLAMSVASWVVIFWKLRLMRRAHVDVPRSTAAFWQAPSLAAA 62
Query: 120 NE-LTTFICDYMRMIIVGNARSYE----------------IENLMDEEIDIILYEKLKPY 162
E L F + + + +V A+ E + ++ + + +L +
Sbjct: 63 AERLPAFDREGLVLPLVRAAQQVEQAGAATLAGQGGLSQRLTRVLRDALHGVLGKLQFGQ 122
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGI----- 213
++ +G + P +G++G + GI A+ ++ S + + +G +L T G+
Sbjct: 123 VLLATVGSTAPFVGLLGTVWGIYHALTAMAGAGQISIERVAGPVGEALIMTAAGLTVAIP 182
Query: 214 -ILSYSLCNPLTSQIKSTRLKQHR-LYIIVKKA 244
+L+Y+ + +I++ R L +V
Sbjct: 183 AVLAYNWFGRVIGRIEADLEGFARDLRELVIDT 215
>gi|167855028|ref|ZP_02477802.1| colicin transport protein TolQ [Haemophilus parasuis 29755]
gi|167853876|gb|EDS25116.1| colicin transport protein TolQ [Haemophilus parasuis 29755]
Length = 226
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M+ ++ L E + +G P IG+ G + GI+ + LS + + + I
Sbjct: 113 MNLALNRELEELENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAIGLFAA 186
>gi|145632632|ref|ZP_01788366.1| TolQ [Haemophilus influenzae 3655]
gi|144986827|gb|EDJ93379.1| TolQ [Haemophilus influenzae 3655]
gi|309972456|gb|ADO95657.1| Outer membrane integrity protein TolQ [Haemophilus influenzae
R2846]
Length = 228
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 128 DYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
D II G R+ + M+ EI+ + ++ + P IG+ G + GI+ A
Sbjct: 100 DAPEAIIKGTMRAMNL--AMNREIESLENR----VPFLATVASVSPYIGLFGTVWGIMHA 153
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
LS + +++ I +L T +G+ +
Sbjct: 154 FMALSGAKQATLQMVAPGIAEALIATAIGLFAA 186
>gi|319794184|ref|YP_004155824.1| protein tolq [Variovorax paradoxus EPS]
gi|315596647|gb|ADU37713.1| protein TolQ [Variovorax paradoxus EPS]
Length = 240
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ E+D ++ +G P +G+ G + GI+ A L+ + +
Sbjct: 113 MRASFQRELDAAEQNL----SFLATVGSVSPYVGLFGTVWGIMHAFTGLAALTQVTLATV 168
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 169 APGIAEALVATAIGLFAA 186
>gi|312882173|ref|ZP_07741921.1| AcrB/AcrD/AcrF family protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370135|gb|EFP97639.1| AcrB/AcrD/AcrF family protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 1035
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 20/196 (10%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL 61
S ++G+ +T+ + M G+ ++ + F + I+ L V + +
Sbjct: 439 SALVGIALTLSAVFVPMAFMSGSTGVIYRQFSVTIITAMALSAVV------ALVLTPALC 492
Query: 62 LEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDP----YNSTIFTSIPTVL 117
+ + + +L KG + P + I T +
Sbjct: 493 ATMLKPIKNEKQANG-IFRLFNRYFDTSAKGYEKSVALMLKRPLRFMFLFLILTGLGAWY 551
Query: 118 ENNELTTFICD------YMRMIIVGNARSYEIENLMDE-EIDIILYEKLKPYHAISHMGE 170
T+F+ D + ++I+ N+ + E M++ E + G
Sbjct: 552 AATLPTSFLPDEDQGILFAQVILPTNSTQKQTEQAMEKLSKYFREEESELVENVFIASGF 611
Query: 171 SLPAIG--IVGAILGI 184
S G + A +G+
Sbjct: 612 SFAGTGNNMGVAFIGL 627
>gi|205356572|ref|ZP_03223335.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345577|gb|EDZ32217.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 253
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM---GNLSQSP-K 196
IE + I + ++ +G S P IG+ G + GI+ A NL +
Sbjct: 133 ERIELRLQNTISKQITASKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLA 192
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T G+I +
Sbjct: 193 VVAPGIAKALFATAFGLIAA 212
>gi|86149597|ref|ZP_01067827.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85839865|gb|EAQ57124.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni CF93-6]
Length = 253
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM---GNLSQSP-K 196
IE + I + ++ +G S P IG+ G + GI+ A NL +
Sbjct: 133 ERIELRLQNTISKQITASKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLA 192
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T G+I +
Sbjct: 193 VVAPGIAEALFATAFGLIAA 212
>gi|86153953|ref|ZP_01072156.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88597218|ref|ZP_01100453.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218561858|ref|YP_002343637.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85842914|gb|EAQ60126.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88190279|gb|EAQ94253.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359564|emb|CAL34348.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284925471|gb|ADC27823.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315927781|gb|EFV07107.1| biopolymer transport protein exbB [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315929096|gb|EFV08327.1| biopolymer transport protein exbB [Campylobacter jejuni subsp.
jejuni 305]
Length = 253
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM---GNLSQSP-K 196
IE + I + ++ +G S P IG+ G + GI+ A NL +
Sbjct: 133 ERIELRLQNTISKQITASKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLA 192
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T G+I +
Sbjct: 193 VVAPGIAEALFATAFGLIAA 212
>gi|219870348|ref|YP_002474723.1| colicin transport protein/biopolymer transport protein, membrane
spanning protein in TolA-TolQ-TolR complex [Haemophilus
parasuis SH0165]
gi|219690552|gb|ACL31775.1| colicin transport protein/biopolymer transport protein, membrane
spanning protein in TolA-TolQ-TolR complex [Haemophilus
parasuis SH0165]
Length = 226
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M+ ++ L E + +G P IG+ G + GI+ + LS + + + I
Sbjct: 113 MNLALNRELEELENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAIGLFAA 186
>gi|217977107|ref|YP_002361254.1| protein TolQ [Methylocella silvestris BL2]
gi|217502483|gb|ACK49892.1| protein TolQ [Methylocella silvestris BL2]
Length = 248
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
IE ++D I + + ++ + + P IG+ G + GI+ + ++ + S +
Sbjct: 124 RIEKVLDVSIAREVEKLESNLLVLATVASASPFIGLFGTVWGIMSSFRSIAASRNTSLAV 183
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 184 VAPGIAEALFATAIGLFAA 202
>gi|325518367|gb|EGC98089.1| biopolymer transport protein [Burkholderia sp. TJI49]
Length = 243
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGMSGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|320538134|ref|ZP_08038029.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Treponema phagedenis F0421]
gi|320144951|gb|EFW36672.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Treponema phagedenis F0421]
Length = 212
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 6/119 (5%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----- 191
A + + + IL + K + +S + P +G++G + G++ A +
Sbjct: 83 TADAQYTAEAFERTVQYILTLQEKGFILLSRIAAVAPLLGLLGTVTGLMAAFQKIAVLGG 142
Query: 192 SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
S IL + I ++ T G++ + ++ R + L++Y
Sbjct: 143 SVDIAILSSGIWEAMITTATGLVTA-IFAFAFYEFFDWLNTQRVRDMEQLVSVLMSYQQ 200
>gi|190149573|ref|YP_001968098.1| colicin transporter TolQ [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303249540|ref|ZP_07335747.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303252542|ref|ZP_07338705.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247292|ref|ZP_07529340.1| hypothetical protein appser2_2890 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251831|ref|ZP_07533733.1| hypothetical protein appser6_3520 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307260767|ref|ZP_07542454.1| hypothetical protein appser12_3390 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307262893|ref|ZP_07544517.1| hypothetical protein appser13_3180 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914704|gb|ACE60956.1| colicin transport protein TolQ [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648510|gb|EFL78703.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302651614|gb|EFL81763.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306856136|gb|EFM88291.1| hypothetical protein appser2_2890 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860738|gb|EFM92749.1| hypothetical protein appser6_3520 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306869493|gb|EFN01283.1| hypothetical protein appser12_3390 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871798|gb|EFN03518.1| hypothetical protein appser13_3180 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 226
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+YMR+ V M+ ++ + + +G P IG+ G +
Sbjct: 88 FKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVENLESYIPFLGTVGSISPYIGLFGTV 147
Query: 182 LGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
GI+ + LS + + + I +L T +G+ +
Sbjct: 148 WGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLFAA 186
>gi|145588466|ref|YP_001155063.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046872|gb|ABP33499.1| Cell division and transport-associated protein TolQ
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 218
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 39/112 (34%), Gaps = 9/112 (8%)
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHM 168
+ N + + + +EI+ + ++ A ++ +
Sbjct: 69 LEAAQRNTRSDAVLEHIFEAGMQEFMKVHEIDAA-RRAMKATYQREMDTLEANLPFLASV 127
Query: 169 GESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 128 GSVSPYIGLFGTVWGIMHSFRGLANVQNATLSAVAPGIAEALIATAIGLFAA 179
>gi|332292402|ref|YP_004431011.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
gi|332170488|gb|AEE19743.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
Length = 257
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 5/142 (3%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ + I+ NL + + ++D NS + V N + Y + V
Sbjct: 80 IAIERIIYLNLASTNTKKLAQDVEDALNSGGVEAAKEVCRNTKGPVASIYYQGLDRVDEG 139
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
E + + + + K IS P +G +G ++G+I+A + +
Sbjct: 140 -VEAAEKAVVAYGGVQMGQLEKNVSWISLFIALAPMLGFMGTVIGMIQAFDRIEAAGDMN 198
Query: 195 PKILGTAIGVSLTGTLLGIILS 216
P ++ I V+L T+ G+I++
Sbjct: 199 PALVAGGIKVALLTTVFGLIVA 220
>gi|197124531|ref|YP_002136482.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|220919256|ref|YP_002494560.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|196174380|gb|ACG75353.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|219957110|gb|ACL67494.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 233
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 20/130 (15%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK--- 196
+ +I ++ E + + + + +G + P +G+ G ++GI+ A ++ + +
Sbjct: 100 AEKIAAAVERERQQVNLKLRRNLWILGTVGATAPFVGLFGTVVGIMHAFRQMAATGQGGF 159
Query: 197 -ILGTAIGVSLTGTLLGIILS----------YSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
++ I +L T GI ++ L Q++ + IVK+ L
Sbjct: 160 TVVAAGISEALVTTAGGIAVAIEAVVIFNFLNVHVQKLALQLRLLTEE---YLEIVKEVL 216
Query: 246 IAYMNGAIPQ 255
GA PQ
Sbjct: 217 ---AGGARPQ 223
>gi|153838036|ref|ZP_01990703.1| protein TolQ [Vibrio parahaemolyticus AQ3810]
gi|149748570|gb|EDM59429.1| protein TolQ [Vibrio parahaemolyticus AQ3810]
Length = 186
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 85 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGLFAA 140
>gi|145297811|ref|YP_001140652.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850583|gb|ABO88904.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 229
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E ++ +G P IG+ G + GI+ A L Q + +++ I
Sbjct: 113 MRVSLSRAVDELESNLPVLATVGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILSYS---LCNPLTSQIKSTRLKQHRLY 238
+L T +G+ + N T++++
Sbjct: 173 AEALIATAMGLFAAIPAVIFYNRFTNKVEKLENAYANFM 211
>gi|218887452|ref|YP_002436773.1| protein TolQ [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758406|gb|ACL09305.1| protein TolQ [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 231
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
G+ + + + + + + ++ + P IG+ G + GI+ + + Q
Sbjct: 93 SSGDVVADNVRRSLRQGVGNEMTRLSASLSFLATAANTAPFIGLFGTVWGIMYSFHAIGQ 152
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
S + I +L T +G+ ++
Sbjct: 153 MKSASLATVAPGISEALIATAIGLFVA 179
>gi|90407977|ref|ZP_01216150.1| TonB system biopolymer transport component [Psychromonas sp. CNPT3]
gi|90310915|gb|EAS39027.1| TonB system biopolymer transport component [Psychromonas sp. CNPT3]
Length = 429
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIIL 215
K ++ + P +G++G + G+I+ +++ ++L I +L T LG+++
Sbjct: 328 KGISTLAVIASIPPLLGLLGTVAGMIETFRVITEQGNSDSQLLAGGISQALLTTELGLMV 387
Query: 216 SYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
+ PL R K RL I+++
Sbjct: 388 A----IPLLLLHCLLRSKSIRLIEILEQ 411
>gi|226942954|ref|YP_002798027.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226944266|ref|YP_002799339.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226717881|gb|ACO77052.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226719193|gb|ACO78364.1| ExbB proton channel [Azotobacter vinelandii DJ]
Length = 236
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 100 RLERALRQQIQRERRSLESGLAVVASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 159
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 160 VAGPIGAALVATGVGIAVA 178
>gi|264679183|ref|YP_003279090.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|299533538|ref|ZP_07046914.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|262209696|gb|ACY33794.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|298718444|gb|EFI59425.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 240
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
E DD N F VLE E + + S + + I+
Sbjct: 66 LEKLGDDKQNPFRF----MVLEGREASAHHRKTSVHLHDTLDISDWVTRCLRNGINEFTA 121
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLG 212
++ +G + P IG+ G + GI A+ + S + IG +L T LG
Sbjct: 122 RLQSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGMSGQSSIDKVAGPIGEALIMTALG 181
Query: 213 IILS 216
+ ++
Sbjct: 182 LAVA 185
>gi|207744080|ref|YP_002260472.1| tolq-related transport (c-terminal fragment) transmembrane protein
[Ralstonia solanacearum IPO1609]
gi|206595484|emb|CAQ62411.1| probable tolq-related transport (c-terminal fragment) transmembrane
protein [Ralstonia solanacearum IPO1609]
Length = 170
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIKAMGNL 191
G I + + ++ + ++ +G P IG+ G + GI+ A L
Sbjct: 45 GIGDPSAILDASRRAMRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGL 104
Query: 192 SQ----SPKILGTAIGVSLTGTLLGIILS 216
S + + I +L T +G+ +
Sbjct: 105 SNVQQATLSAVAPGIAEALVATAIGLFAA 133
>gi|221066179|ref|ZP_03542284.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|220711202|gb|EED66570.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
Length = 240
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
E DD N F VLE E + + S + + I+
Sbjct: 66 LEKLGDDKQNPFRF----MVLEGREASAHHRKTSVHLHDTLDISDWVTRCLRNGINEFTA 121
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLG 212
++ +G + P IG+ G + GI A+ + S + IG +L T LG
Sbjct: 122 RLQSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGMSGQSSIDKVAGPIGEALIMTALG 181
Query: 213 IILS 216
+ ++
Sbjct: 182 LAVA 185
>gi|330815671|ref|YP_004359376.1| tolQ protein [Burkholderia gladioli BSR3]
gi|327368064|gb|AEA59420.1| tolQ protein [Burkholderia gladioli BSR3]
Length = 225
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 50/174 (28%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARKQTERFERDFWSGGDLQALYQSAANNRHTIG--SLERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + I D R + E+D++ ++
Sbjct: 92 EFLKAKEKRISD----PSLILDGAR---------RAMRASFQREMDMLEANL----AFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|294783980|ref|ZP_06749302.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
gi|294479792|gb|EFG27571.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
Length = 202
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+ ++ + +E + +S + P +G++G + G+IKA N+S
Sbjct: 89 QDYEFILKEITIQETSPYESRL----NLLSSIISISPMLGLLGTVTGMIKAFTNISKYGA 144
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLC 220
I+ I +L T G++++ +
Sbjct: 145 GDAAIVADGIAEALLTTAAGLMIAIPVI 172
>gi|320539417|ref|ZP_08039086.1| membrane spanning protein in TonB-ExbB-ExbD complex [Serratia
symbiotica str. Tucson]
gi|320030542|gb|EFW12552.1| membrane spanning protein in TonB-ExbB-ExbD complex [Serratia
symbiotica str. Tucson]
Length = 304
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAI 202
++ + + + ++ +G P IG+ G + GI+ + + + + ++ I
Sbjct: 175 LERRVAAYSRDMARGSGFLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGI 234
Query: 203 GVSLTGTLLGIILS 216
+L T LG+ +
Sbjct: 235 AEALLATALGLCAA 248
>gi|226951957|ref|ZP_03822421.1| biopolymer transport protein (ExbB) [Acinetobacter sp. ATCC 27244]
gi|294649219|ref|ZP_06726657.1| biopolymer transport protein [Acinetobacter haemolyticus ATCC
19194]
gi|226837295|gb|EEH69678.1| biopolymer transport protein (ExbB) [Acinetobacter sp. ATCC 27244]
gi|292824886|gb|EFF83651.1| biopolymer transport protein [Acinetobacter haemolyticus ATCC
19194]
Length = 206
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E + +I + K + + P +G+ G + GI A+ + +S + +
Sbjct: 74 EQALLRQISAEKSQAEKGVSVLGTIASLAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVA 133
Query: 204 V----SLTGTLLGI------ILSYSLCNPLTSQIKSTRLKQHRLYII 240
+ +L T LG+ +L+Y++C + Q L +I
Sbjct: 134 IPVGEALIMTGLGLAVAIPAVLAYNICMRFNRGLAHELQDQAHLLLI 180
>gi|192361298|ref|YP_001980996.1| TonB system transport protein ExbB2 [Cellvibrio japonicus Ueda107]
gi|190687463|gb|ACE85141.1| TonB system transport protein ExbB2 [Cellvibrio japonicus Ueda107]
Length = 175
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QS 194
+++I M + + + + I+ + P +G++G + G+I+ LS
Sbjct: 68 NAHQIRAAMVSRMSAKINQNM---DMITTLIALCPLMGLLGTVTGMIEVFSVLSLTGGGD 124
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ-IKSTRLKQHRLY 238
K + + + T+ G++ + + + + ++ RL+
Sbjct: 125 AKQMAGGVSRATIPTMSGMVAA--ISGLFANTYLTRVAEREDRLF 167
>gi|152980246|ref|YP_001354154.1| biopolymer transport protein [Janthinobacterium sp. Marseille]
gi|151280323|gb|ABR88733.1| biopolymer transport protein [Janthinobacterium sp. Marseille]
Length = 230
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ E+D + ++ +G P +G+ G + GI+ A L+ + +
Sbjct: 120 MRAAYQREMDALESHL----AFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAV 175
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 176 APGIAEALIATAIGLFAA 193
>gi|300724564|ref|YP_003713889.1| ExbB [Xenorhabdus nematophila ATCC 19061]
gi|297631106|emb|CBJ91794.1| ExbB [Xenorhabdus nematophila ATCC 19061]
Length = 333
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAI 202
M+ + I + ++ +G P +G+ G + GI+ + + + + ++ I
Sbjct: 211 MERAVAAISRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGI 270
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 271 AEALLATALGLMAA 284
>gi|261819732|ref|YP_003257838.1| tonB-system energizer ExbB [Pectobacterium wasabiae WPP163]
gi|261603745|gb|ACX86231.1| tonB-system energizer ExbB [Pectobacterium wasabiae WPP163]
Length = 332
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 191 DNNGIKERTAFRLERRVAATGRHMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQT 250
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 251 QTTNLAVVAPGIAEALLATAIGLVAA 276
>gi|302879784|ref|YP_003848348.1| protein TolQ [Gallionella capsiferriformans ES-2]
gi|302582573|gb|ADL56584.1| protein TolQ [Gallionella capsiferriformans ES-2]
Length = 225
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 35/98 (35%), Gaps = 4/98 (4%)
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
F+ + + A M + ++ +G P +G+ G +
Sbjct: 92 VEFVKLKKQHGVDAAAVMEGTRRAMRATYQREMDHLESHLAFLASVGSVSPYVGLFGTVW 151
Query: 183 GIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
GI+ A + N+ Q + + I +L T +G+ +
Sbjct: 152 GIMNAFRGLANVGQATLAHVAPGIAEALVATAMGLFAA 189
>gi|238026340|ref|YP_002910571.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237875534|gb|ACR27867.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
Length = 225
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 48/174 (27%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I +L + + D+ L N E +
Sbjct: 34 SWTFIFRKWFALRRARRQTERFERDFWSGGDLQALYQSAANNRHTIG--SLERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + + MR +++ + ++
Sbjct: 92 EFLKAKEKRISDPSLILDGARRAMRAAFQREMD------MLEANL-----------AFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|192289842|ref|YP_001990447.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192283591|gb|ACE99971.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 257
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + + ++ +G P +G+ G + GI+ A +S+ +
Sbjct: 132 ERVALRLERVEAAMARKIASGTGILATVGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLA 191
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 192 VVAPGIAEALLATALGLVAA 211
>gi|126668396|ref|ZP_01739353.1| Biopolymer transport protein [Marinobacter sp. ELB17]
gi|126627105|gb|EAZ97745.1| Biopolymer transport protein [Marinobacter sp. ELB17]
Length = 229
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 22/187 (11%), Positives = 60/187 (32%), Gaps = 18/187 (9%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNE----LTTFICDYMRMII 134
L L + ++ + SR E + V + + R
Sbjct: 35 LILQRVQVFRKAQQSRLAFEERF--WSGMDLGQLYREVAAEPTPFSGMESIFRAGFREFS 92
Query: 135 VGNARSYEIENLMDEEIDII-------LYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
+S++ + +M+ + ++ +G + P +G+ G + GI+ +
Sbjct: 93 RLRQQSHDADAVMNGAQRAMRVAFSREQERLEISLPFLATVGSTSPYVGLFGTVWGIMNS 152
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
L+Q + + I +L T +G+ + ++ + + Y +
Sbjct: 153 FRGLAQVQQATLATVAPGISEALIATAMGLFAAIPAVI-AYNRFAARSDALLKNYETFAE 211
Query: 244 ALIAYMN 250
+ ++
Sbjct: 212 EFSSILH 218
>gi|77460626|ref|YP_350133.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77384629|gb|ABA76142.1| Cell division and transport-associated protein TolQ [Pseudomonas
fluorescens Pf0-1]
Length = 221
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 49/153 (32%), Gaps = 17/153 (11%)
Query: 81 LLYILMYNLKKGSRNETENHIDDPYNSTIFTSI---------PTVLENNELTTFICDYMR 131
++ NL + R E+ + ++ + + P ++ R
Sbjct: 28 IMIFQRSNLIRAGRRALESFEERFWSGIDLSKLYRQAGSNPDPDSGVEQIFRAGFKEFSR 87
Query: 132 MIIVGNARSYEIEN----LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
+ + M I + + ++ +G P IG+ G + GI+ +
Sbjct: 88 LRQQPGVDPEAVMEGVARAMRVAISREEEKLEQSLPFLATVGSVSPYIGLFGTVWGIMNS 147
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
L+ + + I +L T +G+ +
Sbjct: 148 FRGLASAQQATLATVAPGIAEALIATAIGLFAA 180
>gi|294053814|ref|YP_003547472.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293613147|gb|ADE53302.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 253
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
+ + ++ + ++ +++ + +L + +S + P +G++G +
Sbjct: 108 VTNTLKHSLTQMEQARFAPEALEKAFETASSRELASAYVVVNYLSIISAIAPMVGLLGTV 167
Query: 182 LGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
G++KA +++ P++L I +L T G+ ++
Sbjct: 168 SGMVKAFNSIAAEGMGKPELLADNISEALITTASGMAIA 206
>gi|120554663|ref|YP_959014.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120324512|gb|ABM18827.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 208
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + +M E I+ +++E + + + + P +G++G ++G+IK
Sbjct: 72 RILAGGLINAKHGREIMKESIEHEASQVIHELERFLNPLGTIATITPLLGLLGTVIGMIK 131
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + L I +L T G+ ++
Sbjct: 132 VFAEIQLAGVGNAGNLAGGISEALITTAAGLSVA 165
>gi|315023638|gb|EFT36642.1| MotA/TolQ/ExbB family biopolymer transport prote in [Riemerella
anatipestifer RA-YM]
Length = 220
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPK 196
+I N M + ++ + + K + ++ + P +G +G ++G+I A +S SPK
Sbjct: 105 DISNAMQSQGNLEVSKLEKNLNLLASASGAAPMLGFLGTVIGMIMAFFEISNVTGAVSPK 164
Query: 197 ILGTAIGVSLTGTLLGIIL---SYSLCNPLTSQIKSTRLK 233
+L + I ++ T G+ + +Y N L +++ LK
Sbjct: 165 LLASGIYTAMATTAAGLFVGIPAYFFYNILVTKVDRLVLK 204
>gi|261252507|ref|ZP_05945080.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
gi|260935898|gb|EEX91887.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
Length = 232
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGLFAA 186
>gi|289582979|ref|YP_003481445.1| L-carnitine dehydratase/bile acid-inducible protein F [Natrialba
magadii ATCC 43099]
gi|289532532|gb|ADD06883.1| L-carnitine dehydratase/bile acid-inducible protein F [Natrialba
magadii ATCC 43099]
Length = 395
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 29/192 (15%)
Query: 37 VAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNE 96
V ++A+ + ++ D D K Y + +
Sbjct: 15 VLAGPYCTMLLADMGADVVKIERPGGDLIRSNPPFVD---DPEKEAYGGYFQSVNRGKRS 71
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILY 156
E +D + F S+ + I+V N R+ +E + Y
Sbjct: 72 IELDFNDDEDRADFLSLVEEAD--------------IVVENYRAGTMEKYDLGYETLTEY 117
Query: 157 EKLKPYHAISHMGE---------SLPAIGIVG-AILGIIKAMGNLSQSPKILGTAIGVSL 206
Y +I G+ P+ ++ A+ G+++ G P +G IG
Sbjct: 118 NPQLIYSSIRGFGDPRTGETDRQGQPSFDLIAQALGGVMETTGQEDGPPTKVGPGIGDLF 177
Query: 207 TGTL--LGIILS 216
T TL +GI+ +
Sbjct: 178 TATLNCIGILAA 189
>gi|260768869|ref|ZP_05877803.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
gi|260616899|gb|EEX42084.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
gi|315180562|gb|ADT87476.1| TolQ protein [Vibrio furnissii NCTC 11218]
Length = 227
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L Q + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGQVKQATLAMVAPGIAEALVATAMGLFAA 186
>gi|196233090|ref|ZP_03131938.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196222897|gb|EDY17419.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 634
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 155 LYEKLKPYHAISHMG-ESLPAIGIVGAILGIIKAMGNLSQSPKI----LGTAIGVSLTGT 209
+KL +G P +G++G ++G++ +++S ++ + I +L T
Sbjct: 517 ETQKLNSSLVFLTIGIAGGPYLGLLGTVIGVMITFAVIAKSGQVEVNSIAPGIAGALLAT 576
Query: 210 LLGIILS 216
+ G+ ++
Sbjct: 577 VAGLAVA 583
>gi|145638704|ref|ZP_01794313.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittII]
gi|145272299|gb|EDK12207.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittII]
gi|309750196|gb|ADO80180.1| Outer membrane integrity protein TolQ [Haemophilus influenzae
R2866]
Length = 228
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M+ EI+ + ++ + P IG+ G + GI+ A LS + +++ I
Sbjct: 117 MNREIESLENR----VPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAIGLFAA 186
>gi|313148977|ref|ZP_07811170.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137744|gb|EFR55104.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 265
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q SP ++ + V+L T+ G++
Sbjct: 163 EKGCSWITLFIAMAPSLGFLGTVVGMVMAFDKIQQQGDISPTVVAGGMKVALITTIFGLV 222
Query: 215 LS 216
++
Sbjct: 223 VA 224
>gi|224025693|ref|ZP_03644059.1| hypothetical protein BACCOPRO_02433 [Bacteroides coprophilus DSM
18228]
gi|224018929|gb|EEF76927.1| hypothetical protein BACCOPRO_02433 [Bacteroides coprophilus DSM
18228]
Length = 262
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A ++ Q SP ++ + V+L T+ G+I
Sbjct: 160 EKGCSWITLFIAMAPSLGFLGTVIGMVMAFDDIQQAGDISPTVVAGGMKVALITTIFGLI 219
Query: 215 LS 216
++
Sbjct: 220 VA 221
>gi|222054201|ref|YP_002536563.1| protein TolQ [Geobacter sp. FRC-32]
gi|221563490|gb|ACM19462.1| protein TolQ [Geobacter sp. FRC-32]
Length = 224
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KIL 198
I + + K ++ G + P IG+ G + GI+ A + ++ ++
Sbjct: 108 ITRALRRATTSEITRLEKYLTFLATTGSTAPFIGLFGTVWGIMTAFKGIGETGSASLAVV 167
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G++ +
Sbjct: 168 APGIAEALIATAIGLVAA 185
>gi|153824285|ref|ZP_01976952.1| protein TolQ [Vibrio cholerae B33]
gi|126518191|gb|EAZ75416.1| protein TolQ [Vibrio cholerae B33]
Length = 200
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 110 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 165
>gi|153800449|ref|ZP_01955035.1| tolQ protein [Vibrio cholerae MZO-3]
gi|124124075|gb|EAY42818.1| tolQ protein [Vibrio cholerae MZO-3]
Length = 194
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 98 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 153
>gi|77360812|ref|YP_340387.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis TAC125]
gi|76875723|emb|CAI86944.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis TAC125]
Length = 204
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + + ++ +G P IG+ G + GI+ A L + + +++ I
Sbjct: 83 MRVALSREVEKLESSLSFLATVGSISPYIGLFGTVWGIMNAFIALGEVKQATLQMVAPGI 142
Query: 203 GVSLTGTLLGIILSYSLCNP---LTSQIKSTRLKQHRLYI 239
+L T +G+ + ++++
Sbjct: 143 AEALIATAMGLFAAIPAVIAYNRFANKVEKLETHYINFME 182
>gi|237739017|ref|ZP_04569498.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
gi|229423617|gb|EEO38664.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
Length = 202
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+ ++ + +E + +S + P +G++G + G+IKA N+S
Sbjct: 89 QDYEFILKEITIQETSPYESRL----NLLSSIISISPMLGLLGTVTGMIKAFTNISKYGA 144
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLC 220
I+ I +L T G++++ +
Sbjct: 145 GDAAIVADGIAEALLTTAAGLMIAIPVI 172
>gi|91776694|ref|YP_546450.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710681|gb|ABE50609.1| Cell division and transport-associated protein TolQ
[Methylobacillus flagellatus KT]
Length = 224
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 165 ISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGII------ 214
++ +G P IG+ G + GI+ A + N++Q + + I +L T +G+
Sbjct: 133 LASVGSVSPYIGLFGTVWGIMNAFRGLANMAQATLSHVAPGIAEALVATAIGLFAAIPAV 192
Query: 215 LSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
++Y+ ++ + + +
Sbjct: 193 IAYNRFTASADRLAVRYESFIEEFTNILQ 221
>gi|78066997|ref|YP_369766.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77967742|gb|ABB09122.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 243
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGISRMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|303256701|ref|ZP_07342715.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
gi|302860192|gb|EFL83269.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
Length = 223
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
T ++ +Y + + E ++ E I + K ++ +G P +G++G I+
Sbjct: 87 TPWLKNYASALGSSEKMPF-YEGVLAENISSLAAMMDKRLPLLATLGRISPLLGLLGTII 145
Query: 183 GIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILSYSLCNP 222
G+I+ ++Q ++L I +L T G+I++
Sbjct: 146 GMIQTFAVIAQSRSGIDMELLAEGIWQALITTATGLIIAIPAVFC 190
>gi|261414613|ref|YP_003248296.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371069|gb|ACX73814.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 224
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+E+ + I+ I + + ++ P G++G + GI+ A + S ++
Sbjct: 99 LEDAIQRSIEGIRMGEDRYLTFLATSSNLAPFFGLLGTVWGIMIAFFQIGHHGSADLTVV 158
Query: 199 GTAIGVSLTGTLLGIILS 216
I ++L T+ G++++
Sbjct: 159 APGIAMALITTVAGLLVA 176
>gi|229496973|ref|ZP_04390678.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
endodontalis ATCC 35406]
gi|229316075|gb|EEN82003.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
endodontalis ATCC 35406]
Length = 276
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 172 LPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
P++G +G ++G++ A + SP ++ + V+L T+ G+I++
Sbjct: 189 APSLGFLGTVVGMVMAFDKIEKVGDISPTVVAGGMKVALITTIFGLIVA 237
>gi|114777049|ref|ZP_01452069.1| hypothetical protein SPV1_06794 [Mariprofundus ferrooxydans PV-1]
gi|114777141|ref|ZP_01452161.1| hypothetical protein SPV1_07254 [Mariprofundus ferrooxydans PV-1]
gi|114552570|gb|EAU55030.1| hypothetical protein SPV1_06794 [Mariprofundus ferrooxydans PV-1]
gi|114552662|gb|EAU55122.1| hypothetical protein SPV1_07254 [Mariprofundus ferrooxydans PV-1]
Length = 328
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 52/138 (37%), Gaps = 21/138 (15%)
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
L D M MI N R +++ L+D E + + +G + +G++G
Sbjct: 103 HLVDRFVDAMHMITERNGR-VDVDALIDVEFSAQH----RMSQFVGLLGNLMITLGLIGT 157
Query: 181 ILGIIKAMGNLSQSPKILG--------------TAIGVSLTGTLLGIILSYSLCNPLT-- 224
+LG+ M LS + LG T +GV+ TL+G +L L +
Sbjct: 158 VLGMTITMNGLSGALGSLGVNQHLLVEGLRSAMTGMGVAFYTTLIGSVLGGVLLRVFSWI 217
Query: 225 SQIKSTRLKQHRLYIIVK 242
+ L+ L +
Sbjct: 218 TDASVNGLQDLMLRTCIV 235
>gi|330862283|emb|CBX72444.1| biopolymer transport protein exbB [Yersinia enterocolitica W22703]
Length = 340
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 199 DNNGIKERTAFRLERRVAAISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 258
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 259 QTTNLAVVAPGIAEALLATALGLVAA 284
>gi|307256328|ref|ZP_07538111.1| hypothetical protein appser10_3350 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306865154|gb|EFM97054.1| hypothetical protein appser10_3350 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 226
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+YMR+ V M+ ++ + + +G P IG+ G +
Sbjct: 88 FKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVENLESYIPFLGTVGSISPYIGLFGTV 147
Query: 182 LGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
GI+ + LS + + + I +L T +G+ +
Sbjct: 148 WGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLFAA 186
>gi|291534050|emb|CBL07163.1| Biopolymer transport proteins [Megamonas hypermegale ART12/1]
Length = 222
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ D + + + ++ +E I + + + + + P +G++G ++G+
Sbjct: 93 FVSDVLAIGLKYRECPMSMKESFEEYISVRANGLKRNLNYLDTIVTMAPLLGLLGTVVGM 152
Query: 185 IKAMGNLS---QSPKILGTAIGVSLTGTLLGIILS 216
I + L +P ++ +G +L T G+ ++
Sbjct: 153 ISSFNVLDVAGDNPALITGGVGEALIATATGLCVA 187
>gi|158422145|ref|YP_001523437.1| TolQ protein precursor [Azorhizobium caulinodans ORS 571]
gi|158329034|dbj|BAF86519.1| TolQ protein precursor [Azorhizobium caulinodans ORS 571]
Length = 281
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
IE +MD I + ++ +G + P IG+ G + GI+ + + + +
Sbjct: 162 QRIEKVMDVTISREVEALESKLLVLATVGSAGPFIGLFGTVWGIMTSFQAIAASKNTNLA 221
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 222 VVAPGIAEALFATAMGLIAA 241
>gi|213970953|ref|ZP_03399075.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|213924329|gb|EEB57902.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
Length = 255
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 23/186 (12%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL---------KLLYILMYNLKKGSRNE 96
++A+P + I+ + + LL IF G V K S +
Sbjct: 16 LLASPFESIEHAVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ 75
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE--IENLMDEEIDII 154
+ + D + + + +++ +E + ++I
Sbjct: 76 LAQEQPGAAARVALAGYAAIQ--------VPDGAQANDLSQSINHQDRLERALRQQIVRE 127
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTL 210
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T
Sbjct: 128 RRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATG 187
Query: 211 LGIILS 216
+GI ++
Sbjct: 188 VGIAVA 193
>gi|88810217|ref|ZP_01125474.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
gi|88791847|gb|EAR22957.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
Length = 255
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPT--VLENNELTTFICDYMRMIIVGNARSY 141
L + S H+++ F+ + V+ ++ + + R+ G+A +
Sbjct: 57 FLEFFWATPSLTAVAAHLEEQQPKDPFSRLAHHGVIASSHHERYGVN--RVSTAGSAGDF 114
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----I 197
+ + ID ++ +G + P +G++G + GI A+ ++QS
Sbjct: 115 VTRA-LRKVIDEETARAESGLTLLASIGSTAPFVGLLGTVWGIYHALIAIAQSGSGGLDQ 173
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ +G +L T +G+ ++
Sbjct: 174 VAGPVGEALIMTAIGLAVA 192
>gi|296447813|ref|ZP_06889726.1| protein TolQ [Methylosinus trichosporium OB3b]
gi|296254672|gb|EFH01786.1| protein TolQ [Methylosinus trichosporium OB3b]
Length = 246
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ ++D I + + ++ + + P +G+ G + GI+ + ++ + S +
Sbjct: 118 RIDKVLDVSIAREVEKLESNLLVLATVASAGPFVGLFGTVWGIMTSFRSIAASKNTSLAV 177
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 178 VAPGIAEALLATAIGLFAA 196
>gi|317049560|ref|YP_004117208.1| tonB-system energizer ExbB [Pantoea sp. At-9b]
gi|316951177|gb|ADU70652.1| tonB-system energizer ExbB [Pantoea sp. At-9b]
Length = 247
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + ++ +G P IG+ G + GI+ + ++Q + ++ I
Sbjct: 116 LERRVAAFSRHAGRGNGFLATIGSVAPFIGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGI 175
Query: 203 GVSLTGTLLGIILS 216
+L T +G++ +
Sbjct: 176 AEALLATAIGLVAA 189
>gi|94499586|ref|ZP_01306123.1| Biopolymer transport protein [Oceanobacter sp. RED65]
gi|94428340|gb|EAT13313.1| Biopolymer transport protein [Oceanobacter sp. RED65]
Length = 209
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA----MGNLSQSPKILG 199
+ +++ +++ + A+ + P +G++G +LG+I M + + +L
Sbjct: 89 KEAIEQAASQSIHDMERFLTALGTIAAVTPLMGLLGTVLGMISVFNEIMAQGTGNAAVLA 148
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T G+I++
Sbjct: 149 GGISEALITTAAGMIVA 165
>gi|38327066|gb|AAR17605.1| ExbB [Photorhabdus temperata subsp. temperata]
Length = 344
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLS 192
N+ + ++ + I + ++ +G P +G+ G + GI+ + + +
Sbjct: 217 NSIKERVSFRLERSVAAISRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQT 276
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T LG++ +
Sbjct: 277 TNLAVVAPGIAEALLATALGLVAA 300
>gi|253686750|ref|YP_003015940.1| tonB-system energizer ExbB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753328|gb|ACT11404.1| tonB-system energizer ExbB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 336
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 195 DNNGIKERTAFRLERRVAATGRHMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQT 254
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 255 QTTNLAVVAPGIAEALLATAIGLVAA 280
>gi|121596207|ref|YP_988103.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|120608287|gb|ABM44027.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
Length = 219
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 83/213 (38%), Gaps = 28/213 (13%)
Query: 60 SLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLEN 119
SL + A+ Q + +L + + R H+D P ++ F P++
Sbjct: 3 SLHWLRQGDAVTQASALLLLAMSVASWVVIFWKLRLMRRAHVDVPRSTAAFWQAPSLAAA 62
Query: 120 NE-LTTFICDYMRMIIVGNARSYE----------------IENLMDEEIDIILYEKLKPY 162
E L F + + + +V A+ E + ++ + + +L +
Sbjct: 63 AERLPAFDREGLVLPLVRAAQQVEQAGAATLAGQGGLSQRLTRVLRDALHGVLGKLQFGQ 122
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGI----- 213
++ +G + P +G++G + GI A+ ++ S + + +G +L T G+
Sbjct: 123 VLLATVGSTAPFVGLLGTVWGIYHALTAMAGAGQISIERVAGPVGEALIMTAAGLTVAIP 182
Query: 214 -ILSYSLCNPLTSQIKSTRLKQHR-LYIIVKKA 244
+L+Y+ + +I++ R L +V
Sbjct: 183 AVLAYNWFGRVIGRIEADLEGFARDLRELVIDT 215
>gi|330994512|ref|ZP_08318437.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
gi|329758512|gb|EGG75031.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
Length = 246
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
G I ++ L+ ++ +G + P IG+ G + GI+ + +
Sbjct: 98 DGEGLKERIVLHLERLEAAEGRRLLRGTGVLATIGATAPFIGLFGTVWGIMTSFTGIAAS 157
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ S ++ I +L T LG++ +
Sbjct: 158 RATSLAVVAPGIAEALLATALGLVAA 183
>gi|316935513|ref|YP_004110495.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
gi|315603227|gb|ADU45762.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
Length = 266
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + ++ +G P +G+ G + GI+ A +S+ + ++ I
Sbjct: 147 LERVEAAMARKIASGTGILATIGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGI 206
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 207 AEALLATALGLVAA 220
>gi|254516706|ref|ZP_05128765.1| protein TolQ [gamma proteobacterium NOR5-3]
gi|219675129|gb|EED31496.1| protein TolQ [gamma proteobacterium NOR5-3]
Length = 236
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ R+ + + + M + + ++ +G + P +G+ G +
Sbjct: 90 FKEFSRLAQQSDMDAEAMLEGARRAMRVAMMREEERLEQHLPFLATVGSTSPYVGLFGTV 149
Query: 182 LGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
GI+ + L+ + + I +L T +G+ +
Sbjct: 150 WGIMNSFRGLANTSQATLATVAPGISEALVATAMGLFAA 188
>gi|32476572|ref|NP_869566.1| TolQ [Rhodopirellula baltica SH 1]
gi|32447118|emb|CAD76944.1| probable TolQ [Rhodopirellula baltica SH 1]
gi|327543324|gb|EGF29756.1| MotA/TolQ/ExbB proton channel [Rhodopirellula baltica WH47]
Length = 235
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 13/137 (9%)
Query: 126 ICDYMRMIIVGNARSYEI--ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
I + M +V ++ + +MD ++ + +S + +S P IG+ G + G
Sbjct: 79 IPQMIDMAVVNRDEGFKRAKQIMMDRFQRDVMSDLEYRLSWVSTVIKSAPMIGLFGTVFG 138
Query: 184 IIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQ----- 234
++ A L+ P L I V+L T G+ ++ L + + + +
Sbjct: 139 MMGAFKTLATAEQVEPSALAGDIQVALVTTASGLAIAIPLMLLVATVMIRIAKMEDLLGS 198
Query: 235 --HRLYIIVKKALIAYM 249
R + K L
Sbjct: 199 GLQRFFEAFKVGLAKSQ 215
>gi|323527346|ref|YP_004229499.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323384348|gb|ADX56439.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 237
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ ++ +G + P +G++G + GI A+G+++ S
Sbjct: 101 ERGERVLRALRQALNASQRRLEFGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQA 160
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 161 QIENVAGPVGEALIMTAFGLVVA 183
>gi|206603060|gb|EDZ39540.1| TolQ [Leptospirillum sp. Group II '5-way CG']
Length = 236
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ P IG+ G + GI+ + + S S + I +L T +G+ +
Sbjct: 141 ILATTAGVSPFIGLFGTVWGIVHSFMGISHQSSASIAAVAPGIAEALITTAVGLFTA 197
>gi|146306306|ref|YP_001186771.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145574507|gb|ABP84039.1| Cell division and transport-associated protein TolQ [Pseudomonas
mendocina ymp]
Length = 231
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M I + ++ +G + P IG+ G + GI+ + L+Q + + I
Sbjct: 117 MRVAISREEEKLETALPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALIATAIGLFAA 190
>gi|109899249|ref|YP_662504.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109701530|gb|ABG41450.1| Cell division and transport-associated protein TolQ
[Pseudoalteromonas atlantica T6c]
Length = 236
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ + EID + ++ +G P IG+ G + GI+ A L + + ++
Sbjct: 112 MRVSLSREIDELESRLP----FLATVGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMV 167
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 168 APGIAEALIATAMGLFAA 185
>gi|119944495|ref|YP_942175.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119863099|gb|ABM02576.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 227
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTA 201
+M + + E ++ +G P IG+ G + GI+ + L + + ++
Sbjct: 112 IMRVTLSREIDELETGLPVLATIGSISPYIGLFGTVWGIMNSFIALGEVQQATLTMVAPG 171
Query: 202 IGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 IAEALIATAMGLFAA 186
>gi|89891836|ref|ZP_01203338.1| putative biopolymer transport protein [Flavobacteria bacterium
BBFL7]
gi|89515991|gb|EAS18656.1| putative biopolymer transport protein [Flavobacteria bacterium
BBFL7]
Length = 231
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI--- 197
+I ++ + +Y+ K ++ + + P IG +G ++G++ A L++S
Sbjct: 115 EDINGAIENAGKLEVYKLEKNVSILATIAGAAPMIGFLGTVIGMVIAFRTLAESEGAPEM 174
Query: 198 --LGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 175 GTLAEGIYTAMTTTVAGLIVG 195
>gi|88705608|ref|ZP_01103318.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
gi|88700121|gb|EAQ97230.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
Length = 230
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ R+ + + + M + K ++ +G + P +G+ G +
Sbjct: 84 FKEFSRLAQQSDMDAEAMLEGARRAMRVAMLREEERLEKHLPFLATVGSTSPYVGLFGTV 143
Query: 182 LGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
GI+ + L+ + + I +L T +G+ +
Sbjct: 144 WGIMNSFRGLANTSQATLATVAPGISEALVATAMGLFAA 182
>gi|283781795|ref|YP_003372550.1| hypothetical protein Psta_4037 [Pirellula staleyi DSM 6068]
gi|283440248|gb|ADB18690.1| hypothetical protein Psta_4037 [Pirellula staleyi DSM 6068]
Length = 442
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILS 216
+ Y + + + P +G +G ++GI +A+G+L PK L + I ++ G L G+ ++
Sbjct: 153 RQQDSYSLVRIVIWATPMLGFLGTVMGITQALGDLD--PKALASDIETAMQGLLSGLYVA 210
Query: 217 Y 217
+
Sbjct: 211 F 211
>gi|255011165|ref|ZP_05283291.1| hypothetical protein Bfra3_18634 [Bacteroides fragilis 3_1_12]
Length = 274
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q SP ++ + V+L T+ G++
Sbjct: 172 EKGCSWITLFIAMAPSLGFLGTVVGMVMAFDKIQQQGDISPTVVAGGMKVALITTIFGLV 231
Query: 215 LS 216
++
Sbjct: 232 VA 233
>gi|53715026|ref|YP_101018.1| putative biopolymer transport protein [Bacteroides fragilis YCH46]
gi|60682988|ref|YP_213132.1| hypothetical protein BF3530 [Bacteroides fragilis NCTC 9343]
gi|253566123|ref|ZP_04843577.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265766874|ref|ZP_06094703.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52217891|dbj|BAD50484.1| putative biopolymer transport protein [Bacteroides fragilis YCH46]
gi|60494422|emb|CAH09218.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
gi|251945227|gb|EES85665.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263253251|gb|EEZ24727.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301164453|emb|CBW24011.1| putative membrane protein [Bacteroides fragilis 638R]
Length = 273
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G++ A + Q SP ++ + V+L T+ G++
Sbjct: 171 EKGCSWITLFIAMAPSLGFLGTVVGMVMAFDKIQQQGDISPTVVAGGMKVALITTIFGLV 230
Query: 215 LS 216
++
Sbjct: 231 VA 232
>gi|330828304|ref|YP_004391256.1| protein TolQ [Aeromonas veronii B565]
gi|328803440|gb|AEB48639.1| Protein TolQ [Aeromonas veronii B565]
Length = 229
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYS- 218
++ +G P IG+ G + GI+ A L Q + +++ I +L T +G+ +
Sbjct: 130 VLATIGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGIAEALIATAMGLFAAIPA 189
Query: 219 --LCNPLTSQIKSTRLKQHRLY 238
N +++++
Sbjct: 190 VIFYNRFSNKVERLENAYANFM 211
>gi|325280589|ref|YP_004253131.1| MotA/TolQ/ExbB proton channel [Odoribacter splanchnicus DSM 20712]
gi|324312398|gb|ADY32951.1| MotA/TolQ/ExbB proton channel [Odoribacter splanchnicus DSM 20712]
Length = 272
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK-----AMGNLSQSPK 196
E+ +++ ++ + K ++ P IG +G ++G+++ AM + +
Sbjct: 151 ELRAIVESAANLEVAGMEKGLSTLATCAGMAPMIGFLGTVVGMVQAFYDMAMAGNNINIT 210
Query: 197 ILGTAIGVSLTGTLLGI---ILSYSLCNPLTSQIKSTRLK 233
+L I ++ T+ G+ I++Y N LT++I K
Sbjct: 211 LLSRGIYTAMITTVAGLIVGIIAYFAYNALTAKIDHIVTK 250
>gi|145297920|ref|YP_001140761.1| TolQ proton channel protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850692|gb|ABO89013.1| TolQ proton channel protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 454
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 46/108 (42%), Gaps = 13/108 (12%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
++E+ +DE I + + K I + P ++G ++G+I ++
Sbjct: 331 GDNIEDLESKLDEIILRNVPKFEKGISIIKLIASVAP---LLGTVVGMIATFQAITLFGT 387
Query: 193 QSPKILGTAIGVSLTGTLLGIILS------YSLCNPLTSQIKSTRLKQ 234
PK++ I +L T+ G++++ Y++ + ++ +Q
Sbjct: 388 GDPKLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLEEQ 435
>gi|261414456|ref|YP_003248139.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370912|gb|ACX73657.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302328141|gb|ADL27342.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 522
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
IS + P +G++G ++G+I+ + + PK+L I ++L T G+I++
Sbjct: 428 SWISVFASTAPLLGLLGTVMGMIELFNVITMHGTSDPKLLAGGISIALVTTEAGLIVA 485
>gi|237809445|ref|YP_002893885.1| protein TolQ [Tolumonas auensis DSM 9187]
gi|237501706|gb|ACQ94299.1| protein TolQ [Tolumonas auensis DSM 9187]
Length = 228
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 10/108 (9%)
Query: 113 IPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESL 172
E L MI+ G R+ + ++ E P ++ +G
Sbjct: 86 YSGFKEFARLHNSGLKNQEMIMDGTYRAMRV----SLSRELDELETHLP--VLATIGSIS 139
Query: 173 PAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
P IG+ G + GI+ A LS S ++ I +L T +G+ +
Sbjct: 140 PYIGLFGTVWGIMHAFIALSAVKNASLAMVAPPIAEALIATAMGLFAA 187
>gi|209573954|gb|ACI62915.1| TonB system transport protein ExbB7 [Acidithiobacillus thiooxidans]
Length = 227
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
G + + + ++E + +I + + + + P +G+ G I+G+ A L+Q
Sbjct: 86 SGQVKGEALASRLEESVLVIAPKLDRRLWLLDTIITLAPLLGLFGTIIGMFHAFSVLAQP 145
Query: 195 ---PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
P + + +L T G+ ++ + + VK LI M+G
Sbjct: 146 GHAPMQVTGGVADALVSTASGLFIAMLGLLTF-NAFNNQVRMILLQLDSVKTMLINRMDG 204
Query: 252 AI 253
Sbjct: 205 QP 206
>gi|323496597|ref|ZP_08101650.1| hypothetical protein VISI1226_13296 [Vibrio sinaloensis DSM 21326]
gi|323318343|gb|EGA71301.1| hypothetical protein VISI1226_13296 [Vibrio sinaloensis DSM 21326]
Length = 232
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGLFAA 186
>gi|182677271|ref|YP_001831417.1| protein TolQ [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633154|gb|ACB93928.1| protein TolQ [Beijerinckia indica subsp. indica ATCC 9039]
Length = 241
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
IE +D I + + ++ + + P +G+ G + GI+ A ++ + S +
Sbjct: 117 RIEKALDVSIAREVEKYESSLLVLATVASAGPFVGLFGTVWGIMTAFRSIAASKNTSLAV 176
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 177 VAPGIAEALFATAIGLFAA 195
>gi|190893279|ref|YP_001979821.1| biopolymer transporter protein [Rhizobium etli CIAT 652]
gi|209550780|ref|YP_002282697.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|190698558|gb|ACE92643.1| biopolymer transporter protein [Rhizobium etli CIAT 652]
gi|209536536|gb|ACI56471.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 239
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 112 QMRIDRAMDVTLSRESEFLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLVAA 192
>gi|123443831|ref|YP_001007802.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122090792|emb|CAL13674.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 237
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 96 DNNGIKERTAFRLERRVAAISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 155
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 156 QTTNLAVVAPGIAEALLATALGLVAA 181
>gi|95928838|ref|ZP_01311584.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95135183|gb|EAT16836.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 146
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G +LG+IKA +L K++ I +L T +G++++
Sbjct: 65 ILATLGNNAPFIGLFGTVLGVIKAFHDLHLQQGSGIKVVMGGISEALVATAMGLLVA 121
>gi|294507601|ref|YP_003571659.1| biopolymer transport protein ExbB [Salinibacter ruber M8]
gi|294343929|emb|CBH24707.1| biopolymer transport protein ExbB [Salinibacter ruber M8]
Length = 245
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPK 196
EI++ + ++ K + ++ + P +G G ++G+I+A + +P
Sbjct: 120 EIQDAVQAAGKHETFDLEKRTNLLASIAGIAPMLGFFGTVVGMIRAFQQIQNLQGNVNPS 179
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L I +L T G+++
Sbjct: 180 VLAGGIWEALITTAAGLLVG 199
>gi|262394687|ref|YP_003286541.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
gi|262338281|gb|ACY52076.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
Length = 211
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E ++ +G P IG+ G + GI+ A L + + ++ I
Sbjct: 92 MRVAVSREVDELETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGI 151
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 152 AEALIATAMGLFAA 165
>gi|257470246|ref|ZP_05634337.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|317064459|ref|ZP_07928944.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|313690135|gb|EFS26970.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
Length = 209
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILG 199
E LM E+ + + + + P G++G +LG+IK+ + + P ++
Sbjct: 93 EKLMKEKALEQIENLERRLSILGIVAYISPMAGLLGTVLGMIKSFKAIALQGAGDPNVVA 152
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T G+ ++
Sbjct: 153 NGISEALLTTAAGLFIA 169
>gi|209517623|ref|ZP_03266461.1| protein TolQ [Burkholderia sp. H160]
gi|209501919|gb|EEA01937.1| protein TolQ [Burkholderia sp. H160]
Length = 225
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 47/174 (27%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N + E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHRIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + ++ + MR E ++
Sbjct: 92 EFLKGKEKRLNDSGAILDGARRAMRASFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ A L+ + + I +LT T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGLFAA 188
>gi|254251909|ref|ZP_04945227.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
gi|124894518|gb|EAY68398.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
Length = 218
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + I + + +D +
Sbjct: 53 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----ITRCLKDTMDEGISRMQSG 105
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 106 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 164
>gi|57237184|ref|YP_178196.1| TonB system transport protein ExbB [Campylobacter jejuni RM1221]
gi|57165988|gb|AAW34767.1| TonB system transport protein ExbB [Campylobacter jejuni RM1221]
gi|315057616|gb|ADT71945.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Campylobacter jejuni subsp. jejuni S3]
Length = 253
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM---GNLSQSP-K 196
IE + I + ++ +G S P IG+ G + GI+ A NL +
Sbjct: 133 ERIELRLQNTISKQITASKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLA 192
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T G+I +
Sbjct: 193 VVAPGIAEALFATAFGLIAA 212
>gi|319763204|ref|YP_004127141.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330825398|ref|YP_004388701.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
gi|317117765|gb|ADV00254.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329310770|gb|AEB85185.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
Length = 239
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 18/180 (10%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
+ ++ L + L+I YK + +
Sbjct: 20 AVAVLLLGMSLASWIVIIIKALDIVRYKKHARQAR-------DFWHSEDFAAGLTKLGAD 72
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
+P+ + + D + S + + ID
Sbjct: 73 PANPFRHLALEGREATAHHRNTQAHLHDSL-------DVSDWVTRCLRNCIDEFTARLQS 125
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI A+ + + + IG +L T LG+ ++
Sbjct: 126 GLAILASVGSTAPFIGLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLAVA 185
>gi|293608262|ref|ZP_06690565.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828835|gb|EFF87197.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 211
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEVAASQEISYLEKNINFLGTLSAVAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 148 PGISKALITTAVGMLIA 164
>gi|57505753|ref|ZP_00371679.1| biopolymer transport protein Cj0179 [Campylobacter upsaliensis
RM3195]
gi|57016026|gb|EAL52814.1| biopolymer transport protein Cj0179 [Campylobacter upsaliensis
RM3195]
Length = 249
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM---GNLSQSP-K 196
IE + I + ++ +G S P IG+ G + GI+ A NL +
Sbjct: 129 ERIELRLQNTISKQITASKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLA 188
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T G+I +
Sbjct: 189 VVAPGIAEALFATAFGLIAA 208
>gi|296122085|ref|YP_003629863.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296014425|gb|ADG67664.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 483
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ ++ + ++E+ + D + Y A+ + ++P +G +G ++GI A+
Sbjct: 126 TVCGYVISRHTAADLESHLSYLADTAIARLHSSYAALRTITWAIPILGFLGTVIGITMAI 185
Query: 189 GN-----LSQSPKILGTAIGVSLTGTLLGIILSYSLC 220
N L S + + + V+ T L + LS L
Sbjct: 186 ANVTPEQLESSLNEVTSGLAVAFDTTALSLALSMILV 222
>gi|170695375|ref|ZP_02886521.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170139775|gb|EDT07957.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 239
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 103 ERGERVLRALRQALSASQRRLEFGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQA 162
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 163 QIENVAGPVGEALIMTAFGLVVA 185
>gi|302188942|ref|ZP_07265615.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
syringae 642]
Length = 242
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 65/186 (34%), Gaps = 23/186 (12%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL---------KLLYILMYNLKKGSRNE 96
++A+P + I+ + + LL +F G V K S +
Sbjct: 3 LIASPFESIEHAVIWLLVLFSIATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ 62
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE--IENLMDEEIDII 154
+ + D + + + +++ +E + ++I
Sbjct: 63 LAQEQPGAAARVALAGYAAIQ--------VPDGAQANDLSQSINHQDRLERALRQQIVRE 114
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTL 210
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T
Sbjct: 115 RRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATG 174
Query: 211 LGIILS 216
+GI ++
Sbjct: 175 VGIAVA 180
>gi|290474740|ref|YP_003467620.1| TonB complex protein [Xenorhabdus bovienii SS-2004]
gi|289174053|emb|CBJ80840.1| TonB complex protein [Xenorhabdus bovienii SS-2004]
Length = 330
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAI 202
M+ + I + ++ +G P +G+ G + GI+ + + + + ++ I
Sbjct: 208 MERAVAAISRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGI 267
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 268 AEALLATALGLVAA 281
>gi|209573898|gb|ACI62887.1| TonB system transport protein ExbB4 [Acidithiobacillus thiooxidans]
Length = 205
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
G + + + ++E + +I + + + + P +G+ G I+G+ A L+Q
Sbjct: 64 SGQVKGEALASRLEESVLVIAPKLDRRLWLLDTIITLAPLLGLFGTIIGMFHAFSVLAQP 123
Query: 195 ---PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNG 251
P + + +L T G+ ++ + + VK LI M+G
Sbjct: 124 GHAPMQVTGGVADALVSTASGLFIAMLGLLTF-NAFNNQVRMILLQLDSVKTMLINRMDG 182
Query: 252 AI 253
Sbjct: 183 QP 184
>gi|50085689|ref|YP_047199.1| group A colicins tolerance protein [Acinetobacter sp. ADP1]
gi|49531665|emb|CAG69377.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter sp.
ADP1]
Length = 232
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILG 199
E ++ + + + ++ +G P +G+ G + GI+ A + + Q + +
Sbjct: 112 ERILRVGLSRDQSQLEQGLGTLASIGSVAPYVGLFGTVWGIMNAFIGLAAVDQVTLATVA 171
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 PGIAEALIATAIGLFAA 188
>gi|194290410|ref|YP_002006317.1| membrane spanning protein in tola-tolq-tolr complex; proton channel
component [Cupriavidus taiwanensis LMG 19424]
gi|193224245|emb|CAQ70254.1| membrane spanning protein in TolA-TolQ-TolR complex; putative
proton channel component [Cupriavidus taiwanensis LMG
19424]
Length = 227
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A LS + + I +L T +G+ +
Sbjct: 135 LASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAEALVATAIGLFAA 190
>gi|73540496|ref|YP_295016.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
gi|72117909|gb|AAZ60172.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
Length = 227
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A LS + + I +L T +G+ +
Sbjct: 135 LASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAEALVATAIGLFAA 190
>gi|330944982|gb|EGH46769.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 199
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI+ A+ + S S +
Sbjct: 59 RLERALRQQIVRERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLET 118
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 119 VAGPIGAALVATGVGIAVA 137
>gi|91204007|emb|CAJ71660.1| hypothetical protein kustc0915 [Candidatus Kuenenia
stuttgartiensis]
Length = 489
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+S IE +M E I + I+ S P +G++G + GII + S
Sbjct: 353 EKSELIEEVMYETILATRLKLQSLLPFIAISASSAPLLGLLGTVTGIINTFKLITVFGSG 412
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
K L I +L T G+I++
Sbjct: 413 DVKTLSGGISEALITTKFGLIVA 435
>gi|26987954|ref|NP_743379.1| biopolymer transport protein TolQ [Pseudomonas putida KT2440]
gi|148546491|ref|YP_001266593.1| Tol-Pal system, TolQ [Pseudomonas putida F1]
gi|167035192|ref|YP_001670423.1| protein TolQ [Pseudomonas putida GB-1]
gi|170723157|ref|YP_001750845.1| protein TolQ [Pseudomonas putida W619]
gi|24982667|gb|AAN66843.1|AE016313_2 biopolymer transport protein TolQ [Pseudomonas putida KT2440]
gi|5514776|emb|CAB50778.1| TolQ protein [Pseudomonas putida]
gi|148510549|gb|ABQ77409.1| Tol-Pal system, TolQ [Pseudomonas putida F1]
gi|166861680|gb|ABZ00088.1| protein TolQ [Pseudomonas putida GB-1]
gi|169761160|gb|ACA74476.1| protein TolQ [Pseudomonas putida W619]
gi|313497570|gb|ADR58936.1| TolQ [Pseudomonas putida BIRD-1]
Length = 231
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M I + + ++ +G + P IG+ G + GI+ + L+ + + I
Sbjct: 117 MRVAISREEEKLEQSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALIATAIGLFAA 190
>gi|301057360|ref|ZP_07198478.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300448590|gb|EFK12237.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 159
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
AI + P +G++G + G++ + +P+ L + I +L T G++++
Sbjct: 53 SAILVLAAVAPLLGLLGTVTGMVDTFRVIGVAGTGNPQALASGIEEALITTQTGLLIA 110
>gi|83814527|ref|YP_445708.1| putative biopolymer transport protein [Salinibacter ruber DSM
13855]
gi|83755921|gb|ABC44034.1| putative biopolymer transport protein [Salinibacter ruber DSM
13855]
Length = 230
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPK 196
EI++ + ++ K + ++ + P +G G ++G+I+A + +P
Sbjct: 105 EIQDAVQAAGKHETFDLEKRTNLLASIAGIAPMLGFFGTVVGMIRAFQQIQNLQGNVNPS 164
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+L I +L T G+++
Sbjct: 165 VLAGGIWEALITTAAGLLVG 184
>gi|262276106|ref|ZP_06053915.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
gi|262219914|gb|EEY71230.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
Length = 228
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLC 220
++ +G P IG+ G + GI+ A L + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGLFAAIPAV 190
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+++ S K YI + + ++
Sbjct: 191 M-AYNRLTSKVGKLENNYINFMEEFSSILHRQA 222
>gi|86151491|ref|ZP_01069706.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|148926345|ref|ZP_01810029.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315123780|ref|YP_004065784.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841838|gb|EAQ59085.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|145844737|gb|EDK21842.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315017502|gb|ADT65595.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 253
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM---GNLSQSP-K 196
IE + I + ++ +G S P IG+ G + GI+ A NL +
Sbjct: 133 ERIELRLQNTISKQITASKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLA 192
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T G+I +
Sbjct: 193 VVAPGIAEALFATAFGLIAA 212
>gi|257452703|ref|ZP_05618002.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|257466564|ref|ZP_05630875.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917719|ref|ZP_07913959.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|317059244|ref|ZP_07923729.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313684920|gb|EFS21755.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313691594|gb|EFS28429.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 203
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 138 ARSYEIENLMDEEIDIILYEK---LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL--- 191
+E L ++ ++ + + + IS P +G++G + G+IKA +
Sbjct: 84 ENKESLEALEEKGKEVAIQQLRYLERNMWLISVAAHVAPLVGLLGTVTGMIKAFQAVALY 143
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILS 216
+ P +L I +L T G+ ++
Sbjct: 144 GTGDPAVLAKGISEALYTTAGGLFVA 169
>gi|74318227|ref|YP_315967.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
gi|74057722|gb|AAZ98162.1| MotA/TolQ/ExbB proton channel family [Thiobacillus denitrificans
ATCC 25259]
Length = 231
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 8/92 (8%)
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + ++ + + E+D + ++ +G P +G+ G + GI+ A
Sbjct: 103 GLSLNVIIDGTRRAMRASYQRELDALESHL----AFLATVGSVSPYVGLFGTVWGIMLAF 158
Query: 189 GNLSQSP----KILGTAIGVSLTGTLLGIILS 216
L+ + I +L T +G+ +
Sbjct: 159 QGLATVAQATLAQVAPGIAEALIATAMGLFAA 190
>gi|289673477|ref|ZP_06494367.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
syringae FF5]
Length = 242
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI+ A+ + S S +
Sbjct: 102 RLERALRQQIVRERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLET 161
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 162 VAGPIGAALVATGVGIAVA 180
>gi|57168649|ref|ZP_00367781.1| biopolymer transport protein Cj0179 [Campylobacter coli RM2228]
gi|57019930|gb|EAL56610.1| biopolymer transport protein Cj0179 [Campylobacter coli RM2228]
Length = 253
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM---GNLSQSP-K 196
IE + I + ++ +G S P IG+ G + GI+ A NL +
Sbjct: 133 ERIELRLQNTISKQITASKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLA 192
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T G+I +
Sbjct: 193 VVAPGIAEALFATAFGLIAA 212
>gi|296535989|ref|ZP_06898133.1| TolQ colicin import protein [Roseomonas cervicalis ATCC 49957]
gi|296263675|gb|EFH10156.1| TolQ colicin import protein [Roseomonas cervicalis ATCC 49957]
Length = 238
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
E M+ I + + ++ +G P IG+ G + GI+ + ++ + ++
Sbjct: 122 ERAMNVAITREMDRLERWMVFLASVGSVAPFIGLFGTVWGIMNSFSAIAGMNNTNLAVVA 181
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++ +
Sbjct: 182 PGIAEALFATAIGLVAA 198
>gi|187735055|ref|YP_001877167.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
gi|187425107|gb|ACD04386.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
Length = 263
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIIL 215
K + ++ + P +G+ G + G++ A G L+ P L I V+L T G+I
Sbjct: 153 KWINMLALCAQISPMLGLFGTVQGMVGAFGTLATAGQADPTQLAGDISVALLTTFWGLIN 212
Query: 216 SYSLCNPL 223
+ + P
Sbjct: 213 A-IIATPF 219
>gi|262165951|ref|ZP_06033688.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
gi|262025667|gb|EEY44335.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
Length = 208
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 112 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 167
>gi|229515219|ref|ZP_04404679.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
gi|229347924|gb|EEO12883.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
Length = 208
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 112 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 167
>gi|212704942|ref|ZP_03313070.1| hypothetical protein DESPIG_03009 [Desulfovibrio piger ATCC 29098]
gi|212671606|gb|EEB32089.1| hypothetical protein DESPIG_03009 [Desulfovibrio piger ATCC 29098]
Length = 231
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
+ + + + + + ++ + P IG+ G + GI+ + ++ S S +
Sbjct: 104 VRRSLRQGVASEMARLERSLSLLATTANTAPFIGLFGTVWGIMHSFHSIGMLKSASLATV 163
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 164 APGISEALVATAIGLGVA 181
>gi|50119317|ref|YP_048484.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
gi|49609843|emb|CAG73277.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
Length = 304
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 163 DNNGIKERTAFRLERRVAATGRHMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQT 222
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 223 QTTNLAVVAPGIAEALLATAIGLVAA 248
>gi|332162965|ref|YP_004299542.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325667195|gb|ADZ43839.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 336
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 195 DNNGIKERTAFRLERRVAAISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 254
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 255 QTTNLAVVAPGIAEALLATALGLVAA 280
>gi|262404185|ref|ZP_06080740.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
gi|262349217|gb|EEY98355.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
Length = 227
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 186
>gi|325981587|ref|YP_004293989.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325531106|gb|ADZ25827.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 202
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 50/129 (38%), Gaps = 8/129 (6%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
+++ G +M E I+ +I+++ + + + P +G+ G ++G+I+
Sbjct: 72 QILAAGLRNVKSTREVMKESIEESGRVIVHDLSRYLTTLGTIAALSPLMGLFGTLVGMIE 131
Query: 187 AMGN---LSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK 243
G+ +P L I V+L GI+++ ++ +
Sbjct: 132 IFGSNSPTGSNPAQLAYGISVALYNAAFGILVAIPSMI-FYRHFRAKVDDFVVEMELQAL 190
Query: 244 ALIAYMNGA 252
L+ ++G
Sbjct: 191 KLVEIVHGE 199
>gi|261378938|ref|ZP_05983511.1| biopolymer transport protein ExbB [Neisseria cinerea ATCC 14685]
gi|269144636|gb|EEZ71054.1| biopolymer transport protein ExbB [Neisseria cinerea ATCC 14685]
Length = 219
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG+ G + GI A+ N+ Q S + IG +L T G+ ++
Sbjct: 126 ALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVSTAAGLFVA 182
>gi|196234529|ref|ZP_03133352.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196221409|gb|EDY15956.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 255
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMG-----NLSQSPKILGTAIGVSLTGTLL 211
+ + P +G++GA+ G+I G + +Q P + I +L+ T++
Sbjct: 116 RLESGIFVLEIIVGIAPLLGLLGAVSGLISVFGAFGADSATQDPHGIAKGISEALSTTIV 175
Query: 212 GIILS 216
G+ ++
Sbjct: 176 GLAVA 180
>gi|312796625|ref|YP_004029547.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
gi|312168400|emb|CBW75403.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
Length = 244
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 99 NHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEK 158
D+P+ + + +++ + D M S I + + +D + +
Sbjct: 75 GAADNPFVALALSGKEAADHHHKSQPHLHDRM-------DISDWITRCLKDTMDDCVAQM 127
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
++ +G + P +G+ G + GI A+ + S + +G SL T G+
Sbjct: 128 QSGLAVLASIGSTAPFVGLFGTVWGIYHALLTIGATGDTSIDKVAGPVGESLIMTAFGLF 187
Query: 215 LS 216
++
Sbjct: 188 VA 189
>gi|255320818|ref|ZP_05361993.1| protein TolQ [Acinetobacter radioresistens SK82]
gi|262379407|ref|ZP_06072563.1| TolQ [Acinetobacter radioresistens SH164]
gi|255302195|gb|EET81437.1| protein TolQ [Acinetobacter radioresistens SK82]
gi|262298864|gb|EEY86777.1| TolQ [Acinetobacter radioresistens SH164]
Length = 232
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGII 214
+ A++ +G P IG+ G + GI+ A + + Q + + I +L T +G+
Sbjct: 127 EQGLGALASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLF 186
Query: 215 LS 216
+
Sbjct: 187 AA 188
>gi|219872226|ref|YP_002476601.1| biopolymer transport ExbB protein [Haemophilus parasuis SH0165]
gi|219692430|gb|ACL33653.1| biopolymer transport ExbB protein [Haemophilus parasuis SH0165]
Length = 222
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G P IG+ G + GI A+ ++SQ S + IG +L T +G+ ++
Sbjct: 126 ALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLFVA 182
>gi|121591677|ref|ZP_01678911.1| tolQ protein [Vibrio cholerae 2740-80]
gi|121546462|gb|EAX56686.1| tolQ protein [Vibrio cholerae 2740-80]
Length = 165
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 69 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 124
>gi|298713411|emb|CBJ33618.1| Sphingosine-1-phosphate phosphatase [Ectocarpus siliculosus]
Length = 429
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 7/59 (11%)
Query: 14 IIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQ 72
++ G+ GG G + F++ NP+ + G + I Y +
Sbjct: 230 VLAGYLL-GGFLLTFWLA------FGGAVDAFIVGNPMAWLVVLGGAGGAILAYPCPKK 281
>gi|253583882|ref|ZP_04861080.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
gi|251834454|gb|EES63017.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
Length = 209
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY-HAISHMGESLPAIGIVGAILGII 185
+ + YE + + +E + E L+ + + P G++G +LG+I
Sbjct: 75 VKSILLAYQNEDDLYESKEKLMKEKALEQIENLERRLSILGIVAYISPMAGLLGTVLGMI 134
Query: 186 KAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
K+ + + P ++ I +L T G++++
Sbjct: 135 KSFKAIALQGAGDPNVVANGISEALLTTAAGLLIA 169
>gi|323495164|ref|ZP_08100249.1| hypothetical protein VIBR0546_08520 [Vibrio brasiliensis LMG 20546]
gi|323310604|gb|EGA63783.1| hypothetical protein VIBR0546_08520 [Vibrio brasiliensis LMG 20546]
Length = 231
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGLFAA 186
>gi|258621412|ref|ZP_05716446.1| tolQ protein [Vibrio mimicus VM573]
gi|258626841|ref|ZP_05721648.1| tolQ protein [Vibrio mimicus VM603]
gi|262171196|ref|ZP_06038874.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
gi|258580888|gb|EEW05830.1| tolQ protein [Vibrio mimicus VM603]
gi|258586800|gb|EEW11515.1| tolQ protein [Vibrio mimicus VM573]
gi|261892272|gb|EEY38258.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
Length = 227
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 186
>gi|296121013|ref|YP_003628791.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296013353|gb|ADG66592.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 339
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
S E+E + + + + K ++ P IG++G + G+I++ ++
Sbjct: 195 GKPSVEVEQAIIDGGERQTSQLRKHIRVLNGAATVAPLIGLLGTVAGMIESFNTIAAKQA 254
Query: 193 -QSPKILGTAIGVSLTGTLLGIILS 216
+ L IG++L T G++++
Sbjct: 255 MGRTEDLAAGIGLALLTTAAGLLIA 279
>gi|226938987|ref|YP_002794058.1| TolQ [Laribacter hongkongensis HLHK9]
gi|226713911|gb|ACO73049.1| TolQ [Laribacter hongkongensis HLHK9]
Length = 225
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
M L + + ++ +G P IG+ G + GI+ A L + +
Sbjct: 111 RRAMKAAAQRELDDLDRHTSFLATVGSVSPYIGLFGTVWGIMHAFIGLGNAGNATLATVA 170
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 171 PGIAEALIATAIGLFAA 187
>gi|192292067|ref|YP_001992672.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192285816|gb|ACF02197.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 316
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLL 211
++ ++ +G P +G+ G + GI+ A +SQ + ++ I +L T
Sbjct: 197 RRLMRGTGLLATVGAVSPFVGLFGTVWGIMNAFIGISQSHTTNLAVVAPGIAEALLATAF 256
Query: 212 GIILS 216
G++ +
Sbjct: 257 GLVAA 261
>gi|157736642|ref|YP_001489325.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315635806|ref|ZP_07891068.1| biopolymer transport protein ExbB [Arcobacter butzleri JV22]
gi|157698496|gb|ABV66656.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315479785|gb|EFU70456.1| biopolymer transport protein ExbB [Arcobacter butzleri JV22]
Length = 157
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
++I+ + + ++ +I+ + I ++ P +G++G ++GI +
Sbjct: 40 LLILQIKENLDRTKPLEAQIEYETKKLESGLTVIKNIAIISPLLGLLGTVVGIYILFDQI 99
Query: 192 S----QSPKILGTAIGVSLTGTLLGII------LSYSLCNPLTSQIKSTRLKQH 235
+ P I I ++L T+ GII ++Y+ I+ K+
Sbjct: 100 TLKGLGDPTIFSGGIAIALITTVAGIIVSIPHQIAYNHFISAIDTIEVKAKKEL 153
>gi|120613185|ref|YP_972863.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120591649|gb|ABM35089.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
Length = 222
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ RS ++ ++ + + +L ++ +G + P +G++G + GI A+ L+
Sbjct: 94 LAASGQRSQQLTRVLRDALHRVLARLEFGQVLLATVGSTAPFVGLLGTVWGIYHALTALA 153
Query: 193 QSPKI----LGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKS 229
+ + +G +L T G+ +L+Y+L ++++
Sbjct: 154 GGGAVSIDRVAGPVGEALVMTAAGLAVAIPAVLAYNLFGRWIGRVEA 200
>gi|262065975|ref|ZP_06025587.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
gi|291380332|gb|EFE87850.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
Length = 202
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---- 192
+ ++ + +E + ++ + P +G++G + G+IKA N+S
Sbjct: 89 QDYEFILKEITIQETSPYESRL----NLLASIISISPMLGLLGTVTGMIKAFTNISKYGA 144
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSLC 220
I+ I +L T G++++ +
Sbjct: 145 GDAAIVADGIAEALLTTAAGLMIAIPVI 172
>gi|192362359|ref|YP_001981528.1| tolQ protein [Cellvibrio japonicus Ueda107]
gi|190688524|gb|ACE86202.1| tolQ protein [Cellvibrio japonicus Ueda107]
Length = 228
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 53/164 (32%), Gaps = 22/164 (13%)
Query: 93 SRNETENHIDDPYNSTIFTSIPTV--LENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
R + I++ + F + + + MR + V AR E
Sbjct: 75 GRTDLAEGIENIF-RAGFKEFTRLRQTAGADSDAIMEGSMRAMRVALAREQE-------- 125
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSL 206
+ + ++ + P IG+ G + GI+ + N++ S + I +L
Sbjct: 126 ------KLEENLPFLASVASVSPYIGLFGTVWGIMVSFLNIANAGQPSLATVAPGIAEAL 179
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
T +G+ + ++ + Y + A ++
Sbjct: 180 IATAMGLFAAIPAVL-AYNKFSARAESLLSNYQTFAEEFSAILH 222
>gi|254229967|ref|ZP_04923369.1| protein TolQ [Vibrio sp. Ex25]
gi|151937536|gb|EDN56392.1| protein TolQ [Vibrio sp. Ex25]
Length = 221
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E ++ +G P IG+ G + GI+ A L + + ++ I
Sbjct: 102 MRVAVSREVDELETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGI 161
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 162 AEALIATAMGLFAA 175
>gi|330958698|gb|EGH58958.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 240
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 72/180 (40%), Gaps = 11/180 (6%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV-LKLLYILMYNLKKG--SRNETENHID 102
++A+P + I+ + + LL IF G V L K + + ++
Sbjct: 3 LIASPFESIEHAVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ 62
Query: 103 DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE--IENLMDEEIDIILYEKLK 160
+ + + + + D ++ + + +++ +E + ++I
Sbjct: 63 LAHEQPGAAARVALAGYVAIQ--VSDGAQVNDLSQSINHQDRLERALRQQIVRERRSLET 120
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T +GI ++
Sbjct: 121 GLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVA 180
>gi|229508064|ref|ZP_04397569.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229511697|ref|ZP_04401176.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229518836|ref|ZP_04408279.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229607625|ref|YP_002878273.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
gi|229343525|gb|EEO08500.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229351662|gb|EEO16603.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229355569|gb|EEO20490.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229370280|gb|ACQ60703.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
Length = 208
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 112 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 167
>gi|225847923|ref|YP_002728086.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643722|gb|ACN98772.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 146
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK-- 196
E+ +++ + ++ G + P IG+ G +LG+IKA +L S +
Sbjct: 51 DPLELRLQLEKRL-----------GILATFGNNAPFIGLFGTVLGVIKAFHHLGTSSEFG 99
Query: 197 --ILGTAIGVSLTGTLLGIILS 216
++ T I +L T +G+ ++
Sbjct: 100 VRVVMTGISEALVATAMGLFVA 121
>gi|71735398|ref|YP_275070.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482634|ref|ZP_05636675.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289623868|ref|ZP_06456822.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289650028|ref|ZP_06481371.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|71555951|gb|AAZ35162.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320323563|gb|EFW79647.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320328195|gb|EFW84199.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330868827|gb|EGH03536.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330880152|gb|EGH14301.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330890875|gb|EGH23536.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv. mori
str. 301020]
gi|330986048|gb|EGH84151.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010353|gb|EGH90409.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 242
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 23/186 (12%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL---------KLLYILMYNLKKGSRNE 96
++A+P + I+ + + LL IF G V K S +
Sbjct: 3 LLASPFESIEHAVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ 62
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE--IENLMDEEIDII 154
+ + D + + + +++ +E + ++I
Sbjct: 63 LAQEQPGAAARVALAGYAAIQ--------VPDGAQANDLSQSINHQDRLERALRQQIVRE 114
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTL 210
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T
Sbjct: 115 RRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATG 174
Query: 211 LGIILS 216
+GI ++
Sbjct: 175 VGIAVA 180
>gi|304312643|ref|YP_003812241.1| Biopolymer transport proteins-like [gamma proteobacterium HdN1]
gi|301798376|emb|CBL46600.1| Biopolymer transport proteins-like [gamma proteobacterium HdN1]
Length = 232
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP--- 195
EIE M+E + + + H ++ +G++G ++G+I A ++ +
Sbjct: 105 NHEEIEMAMEEGLMETIPSLERRTHYVATFANIATLLGLLGTVMGMIDAFTAVATADPAR 164
Query: 196 --KILGTAIGVSLTGTLLGIILSYSLCNPLT 224
++L +I V++ T LG+I + L +
Sbjct: 165 KGELLSASISVAMNNTALGLIAAIPLLLCFS 195
>gi|301166334|emb|CBW25910.1| putative biopolymer transport protein [Bacteriovorax marinus SJ]
Length = 197
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 11/154 (7%)
Query: 74 TYCDVLKLLYILMYNLKKGS-RNETENHIDDPY-NSTIFTSIPTVLENNELTTFI----- 126
Y +L L + +K N + ID + + E L+ I
Sbjct: 12 MYPLLLCSLLVWFVTFEKIRFLNNLKKDIDLMFIKGQALLKENKIHEAKGLSHSIHPLLS 71
Query: 127 CDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
Y+ + + + + + I +G S P IG+ G ++GIIK
Sbjct: 72 TPYLTLFESEELTREQWSMRLGRRLIETQQGLKRSLWIIGTIGSSAPFIGLFGTVVGIIK 131
Query: 187 AMGNLSQSPKILGTAIGV----SLTGTLLGIILS 216
+ +++ S K + +L T GII++
Sbjct: 132 SFQSIAASGKSGFAVVASGLSEALIATAAGIIVA 165
>gi|299134175|ref|ZP_07027368.1| protein TolQ [Afipia sp. 1NLS2]
gi|298590922|gb|EFI51124.1| protein TolQ [Afipia sp. 1NLS2]
Length = 237
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ +M I + + ++ +G + P +G+ G + GI+ + ++ + S +
Sbjct: 119 RIDKVMSVSIAREIERLDRRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAV 178
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+I +
Sbjct: 179 VAPGIAEALFATAMGLIAA 197
>gi|262374147|ref|ZP_06067424.1| TolQ [Acinetobacter junii SH205]
gi|262311158|gb|EEY92245.1| TolQ [Acinetobacter junii SH205]
Length = 206
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E + +I + K + + P +G+ G + GI A+ + +S + +
Sbjct: 74 EQALLRQISAEKSQAEKGVSVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVA 133
Query: 204 V----SLTGTLLGI------ILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L T LG+ +L+Y++C + Q +I
Sbjct: 134 TPVGEALIMTGLGLAVAIPAVLAYNICVRFNRGLAHDLQDQAHSLLI 180
>gi|325982383|ref|YP_004294785.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325531902|gb|ADZ26623.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 253
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 9/175 (5%)
Query: 83 YILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE 142
+ Y+ + +R E +N + D S + ++++ + + +
Sbjct: 56 HFWSYDSLQTARIELKNAVPDNAFSELAKMSIDATSDSKIR-----NIHKSLTAEGTNEF 110
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
+ + ID I+ G + P IG+ G + GI A+ + + +
Sbjct: 111 LTRTLRNGIDQEATRVENGLTLIATAGSAAPYIGLFGTVWGIYHALIQIGLSGQGTLDKV 170
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+G +L T LG+ ++ + ++ R+ RL + G
Sbjct: 171 AGPVGEALIMTALGLAVAIPAVLAYNAFVRRNRIWLARLEAFAHDLFVLITAGDN 225
>gi|53716290|ref|YP_106355.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|67642803|ref|ZP_00441555.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|121596962|ref|YP_990399.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
SAVP1]
gi|124382037|ref|YP_001024894.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10229]
gi|126446944|ref|YP_001079235.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10247]
gi|167002073|ref|ZP_02267863.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|254176448|ref|ZP_04883106.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|254203338|ref|ZP_04909699.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|254205217|ref|ZP_04911570.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|254356029|ref|ZP_04972306.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei 2002721280]
gi|52422260|gb|AAU45830.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|121224760|gb|ABM48291.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei SAVP1]
gi|126239798|gb|ABO02910.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei NCTC 10247]
gi|147745577|gb|EDK52656.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|147754803|gb|EDK61867.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|148025012|gb|EDK83181.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei 2002721280]
gi|160697490|gb|EDP87460.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|238524001|gb|EEP87436.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|243062230|gb|EES44416.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|261826614|gb|ABN00385.2| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei NCTC 10229]
Length = 242
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLRD--RMDVSDW-----VTRCLKDTMDEGIARMQGG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|330900513|gb|EGH31932.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330979867|gb|EGH78183.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 242
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI+ A+ + S S +
Sbjct: 102 RLERALRQQIVRERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLET 161
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 162 VAGPIGAALVATGVGIAVA 180
>gi|301167607|emb|CBW27190.1| putative transport-related protein [Bacteriovorax marinus SJ]
Length = 172
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ ++ + I + +E+ + K + + + P +G++G ++G++ A +SQ
Sbjct: 56 VTKDSDTNTIIEIAKQELSNHIAGLEKGLNTVKIIASISPLLGLLGTVIGVLVAFKVMSQ 115
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
+P I ++L T+ G+I++
Sbjct: 116 TGLNNPASFAQGISMALITTVGGMIVA 142
>gi|114327767|ref|YP_744924.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
gi|114315941|gb|ABI62001.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
Length = 241
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 44/117 (37%), Gaps = 5/117 (4%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
+ M I + + ++ +G + P IG+ G + GI+ + ++ + +
Sbjct: 122 ERTDRAMGVTIGREMDRLERWMVFLASVGSTAPFIGLFGTVWGIMNSFSSIAAMHNTNLS 181
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
++ I +L T +G++ + + +++ + + A ++
Sbjct: 182 VVAPGIAEALFATAMGLVAAIPAVL-IYNKLSTDMARFAARLEAFAAEFGAILSRQS 237
>gi|126442436|ref|YP_001061618.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 668]
gi|126221927|gb|ABN85432.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 668]
Length = 242
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + +++ MDE I
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDWVTR-CLKDTMDERI----ARMQGG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|313681889|ref|YP_004059627.1| cell division and transport-associated protein tolq [Sulfuricurvum
kujiense DSM 16994]
gi|313154749|gb|ADR33427.1| Cell division and transport-associated protein TolQ [Sulfuricurvum
kujiense DSM 16994]
Length = 188
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 53/149 (35%), Gaps = 14/149 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
++ ++ + + L+ F R+ +L D E K
Sbjct: 48 ENQSLESLLLGSQKIPDFAYLSHFTKSSSRLST----------SLFDMASYAATKEATKG 97
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---SPKILGTAIGVSLTGTLLGIILSYS 218
+S + + P IG+ G ++ I+ ++ Q + I+ + + +L T GI ++
Sbjct: 98 LMFLSVVASTTPFIGLFGTVVSILSTFDHIGQASGTMSIIASGVSDALVATASGIFVA-I 156
Query: 219 LCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+K + L + AL++
Sbjct: 157 FAYTYHQILKRKAFELSGLIRMQGDALLS 185
>gi|294792560|ref|ZP_06757707.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
6_1_27]
gi|294456459|gb|EFG24822.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
6_1_27]
Length = 203
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQSP 195
+++ M++ + + + +S + P +G++G + G+I + G P
Sbjct: 85 DRNVLQSKMEDMVAHVYTHASRGLDWLSTIVTIAPLLGLLGTVTGMIGAFQVFGADGAVP 144
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ +G +L T G+ ++
Sbjct: 145 TAITGGVGEALVATASGLCVA 165
>gi|75676230|ref|YP_318651.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74421100|gb|ABA05299.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 421
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK----LKPYHAISHMGESLPAIGIVGAILGIIKA 187
+ G+ S I+ + + I + + ++ +G + P +G+ G + GI+ A
Sbjct: 271 LQRSGDLSSEGIKERLAIALSRIEAKAGRDIARGTGLLATIGATAPFVGLFGTVWGIMNA 330
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+SQ + ++ I +L T LG++ +
Sbjct: 331 FIGISQTKTTNLAVVAPGIAEALLATALGLVAA 363
>gi|319639111|ref|ZP_07993868.1| biopolymer transporter exbB [Neisseria mucosa C102]
gi|317399689|gb|EFV80353.1| biopolymer transporter exbB [Neisseria mucosa C102]
Length = 219
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG++G + GI A+ +S+ S + IG +L T +G+ ++
Sbjct: 126 ALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVGLFVA 182
>gi|113868788|ref|YP_727277.1| biopolymer transport protein [Ralstonia eutropha H16]
gi|113527564|emb|CAJ93909.1| biopolymer transport protein [Ralstonia eutropha H16]
Length = 227
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A LS + + I +L T +G+ +
Sbjct: 135 LASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAEALVATAIGLFAA 190
>gi|118579668|ref|YP_900918.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118502378|gb|ABK98860.1| Cell division and transport-associated protein TolQ [Pelobacter
propionicus DSM 2379]
Length = 223
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----K 196
+ + + L + ++ G + P IG+ G + GI+ A + ++
Sbjct: 105 ENVSRALRRATNSELTRLERYLTFLATTGSTSPFIGLFGTVWGIMTAFEGIGRTGSASLA 164
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 165 VVAPGIAEALIATAIGLVAA 184
>gi|94311610|ref|YP_584820.1| MotA/TolQ/ExbB proton channel [Cupriavidus metallidurans CH34]
gi|93355462|gb|ABF09551.1| membrane spanning protein in TolA-TolQ-TolR complex [Cupriavidus
metallidurans CH34]
gi|222874295|gb|EEF11426.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A LS + + I +L T +G+ +
Sbjct: 135 LASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAEALVATAIGLFAA 190
>gi|332305761|ref|YP_004433612.1| protein TolQ [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173090|gb|AEE22344.1| protein TolQ [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 236
Score = 38.0 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ + EID + ++ +G P IG+ G + GI+ A L + + ++
Sbjct: 112 MRVSLSREIDDLESRLP----FLATVGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMV 167
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 168 APGIAEALIATAMGLFAA 185
>gi|149192084|ref|ZP_01870308.1| TolQ protein [Vibrio shilonii AK1]
gi|148834070|gb|EDL51083.1| TolQ protein [Vibrio shilonii AK1]
Length = 228
Score = 38.0 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAMGLFAA 186
>gi|71906754|ref|YP_284341.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
gi|71846375|gb|AAZ45871.1| outer membrane transport energization protein ExbB [Dechloromonas
aromatica RCB]
Length = 247
Score = 38.0 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ + ++E + +++ ++ G + P +G+ G + GI A+ +
Sbjct: 103 LASRFDPAEQMERALRQQLSATQARMENGLTLLATTGATSPFVGLFGTVWGIYHALVAIG 162
Query: 193 QSPKILGTAIGV----SLTGTLLGIILS 216
S + I +L T G+ ++
Sbjct: 163 ISGQAALEKIAGPVGEALIMTAAGLAVA 190
>gi|261211903|ref|ZP_05926190.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
gi|260839253|gb|EEX65885.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
Length = 227
Score = 38.0 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 186
>gi|322379703|ref|ZP_08054016.1| biopolymer transport protein ExbB [Helicobacter suis HS5]
gi|321147852|gb|EFX42439.1| biopolymer transport protein ExbB [Helicobacter suis HS5]
Length = 153
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSPK--ILGTAIGVSLTGTLLGIIL---SYS 218
+S + + P +G+ G ++ I++ G+L ++ I +L T GI+ +YS
Sbjct: 64 VLSIIASTAPFVGLFGTVVEILETFGHLGGQVSFDVIAPTISKALVATAAGILTAIPAYS 123
Query: 219 LCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+K + LIA
Sbjct: 124 FFL----ILKRKVYDLSVYVQMQIDMLIA 148
>gi|313891512|ref|ZP_07825125.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Dialister microaerophilus UPII 345-E]
gi|313120089|gb|EFR43268.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Dialister microaerophilus UPII 345-E]
Length = 202
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 50/135 (37%), Gaps = 22/135 (16%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMG-------------ESLPAIGIV 178
+ G + I ++ EK+ AI +G P +G++
Sbjct: 65 LEKDGGIPAQIILEGINSTNRASSQEKIIESAAIHAIGKLKEYITYLDVIVTLSPLMGLL 124
Query: 179 GAILGII---KAMGNLSQSPKILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKS 229
G ++G+I + +S P + + + +L T G+ +L+Y+ +++
Sbjct: 125 GTVVGMIGSFNVLSVVSGQPFAVTSGVAEALVCTATGLGVAIMALLAYTYLTARVNKLIL 184
Query: 230 TRLKQHRLYIIVKKA 244
K +Y+ + +
Sbjct: 185 DIEKISTVYLTMIEG 199
>gi|302038653|ref|YP_003798975.1| protein TolQ [Candidatus Nitrospira defluvii]
gi|300606717|emb|CBK43050.1| Protein TolQ [Candidatus Nitrospira defluvii]
Length = 240
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ G P IG++G +LGII + + S + + +L T G+ +
Sbjct: 139 VLATTGNITPFIGLLGTVLGIIDSFREIGTQGTASIAAVAPGVSEALVATAAGLFTA 195
>gi|296535156|ref|ZP_06897383.1| TolQ protein [Roseomonas cervicalis ATCC 49957]
gi|296264519|gb|EFH10917.1| TolQ protein [Roseomonas cervicalis ATCC 49957]
Length = 171
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----K 196
+ +E+ M + I L ++ G P IG+ G + GI+ + ++QS
Sbjct: 41 HRMEHAMRHVLTIELRRVEPGLPFLATTGAVAPFIGLFGTVWGIMNSFAGIAQSNDTSLA 100
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 101 VVAPGIAEALFATAIGLIAA 120
>gi|167854591|ref|ZP_02477372.1| biopolymer transport ExbB protein [Haemophilus parasuis 29755]
gi|167854346|gb|EDS25579.1| biopolymer transport ExbB protein [Haemophilus parasuis 29755]
Length = 222
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G P IG+ G + GI A+ ++SQ S + IG +L T +G+ ++
Sbjct: 126 ALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLFVA 182
>gi|153214280|ref|ZP_01949297.1| tolQ protein [Vibrio cholerae 1587]
gi|229520299|ref|ZP_04409725.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
gi|229523857|ref|ZP_04413262.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
gi|229529138|ref|ZP_04418528.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
gi|124115428|gb|EAY34248.1| tolQ protein [Vibrio cholerae 1587]
gi|229332912|gb|EEN98398.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
gi|229337438|gb|EEO02455.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
gi|229342665|gb|EEO07657.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
Length = 208
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 112 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 167
>gi|124002252|ref|ZP_01687106.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
gi|123992718|gb|EAY32063.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
Length = 216
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
IE ++ I LY K ++ + + P +G +G ++G+I A +SQ SP++L
Sbjct: 103 IETSIEYVGKIELYRLEKNLAMLATIAGAAPMVGFLGTVVGMIGAFIRISQQSTVSPQVL 162
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T G+I+
Sbjct: 163 SQGIYTALLTTAGGLIVG 180
>gi|114799599|ref|YP_758885.1| protein TolQ [Hyphomonas neptunium ATCC 15444]
gi|114739773|gb|ABI77898.1| protein TolQ [Hyphomonas neptunium ATCC 15444]
Length = 236
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILG 199
E M +D + ++ +G + P IG+ G + GI+ A N+++ +
Sbjct: 118 ERSMRAAVDREIGRASAGLSVLATIGSASPFIGLFGTVWGIMNAFLNIAEQQDTSLGTVA 177
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T LG+I +
Sbjct: 178 GPIAEALFATGLGLIAA 194
>gi|15641841|ref|NP_231473.1| tolQ protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121727659|ref|ZP_01680762.1| tolQ protein [Vibrio cholerae V52]
gi|147674417|ref|YP_001217375.1| tolQ protein [Vibrio cholerae O395]
gi|153820329|ref|ZP_01972996.1| tolQ protein [Vibrio cholerae NCTC 8457]
gi|227081968|ref|YP_002810519.1| tolQ protein [Vibrio cholerae M66-2]
gi|254848925|ref|ZP_05238275.1| tolQ protein [Vibrio cholerae MO10]
gi|255745399|ref|ZP_05419348.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262169826|ref|ZP_06037517.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
gi|298498122|ref|ZP_07007929.1| TolQ [Vibrio cholerae MAK 757]
gi|10441437|gb|AAG17039.1|AF187269_1 TolQ [Vibrio cholerae O395]
gi|9656366|gb|AAF94987.1| tolQ protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121630046|gb|EAX62453.1| tolQ protein [Vibrio cholerae V52]
gi|126509124|gb|EAZ71718.1| tolQ protein [Vibrio cholerae NCTC 8457]
gi|146316300|gb|ABQ20839.1| tolQ protein [Vibrio cholerae O395]
gi|227009856|gb|ACP06068.1| tolQ protein [Vibrio cholerae M66-2]
gi|227013738|gb|ACP09948.1| tolQ protein [Vibrio cholerae O395]
gi|254844630|gb|EET23044.1| tolQ protein [Vibrio cholerae MO10]
gi|255737229|gb|EET92625.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262022060|gb|EEY40770.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
gi|297542455|gb|EFH78505.1| TolQ [Vibrio cholerae MAK 757]
Length = 227
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 186
>gi|118581726|ref|YP_902976.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118504436|gb|ABL00919.1| Cell division and transport-associated protein TolQ [Pelobacter
propionicus DSM 2379]
Length = 223
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----K 196
+ + + L + ++ G + P IG+ G + GI+ A + ++
Sbjct: 105 ENVSRALRRATNSELTRLERYLTFLATTGSTSPFIGLFGTVWGIMTAFEGIGRTGSASLA 164
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 165 VVAPGIAEALIATAIGLVAA 184
>gi|312115235|ref|YP_004012831.1| tonB-system energizer ExbB [Rhodomicrobium vannielii ATCC 17100]
gi|311220364|gb|ADP71732.1| tonB-system energizer ExbB [Rhodomicrobium vannielii ATCC 17100]
Length = 311
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ + + + ++ +G P +G+ G + GI+ A +S+ +
Sbjct: 181 ERVASRLSRAEARASRHVMVGIGIVATIGSVAPFVGLFGTVWGIMNAFIGISKAQTTNLA 240
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 241 VVAPGIAEALLATALGLVAA 260
>gi|262278155|ref|ZP_06055940.1| tolerance protein to group A colicins [Acinetobacter calcoaceticus
RUH2202]
gi|262258506|gb|EEY77239.1| tolerance protein to group A colicins [Acinetobacter calcoaceticus
RUH2202]
Length = 232
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILG 199
E ++ + +++ +G P IG+ G + GI+ A + + Q + +
Sbjct: 112 ERILRVGLSRDQSHLEYGLGSLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVA 171
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 PGIAEALIATAIGLFAA 188
>gi|71735754|ref|YP_275910.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556307|gb|AAZ35518.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320323049|gb|EFW79138.1| tolQ protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320329679|gb|EFW85668.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330877976|gb|EGH12125.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 231
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M I + ++ +G + P +G+ G + GI+ + L+ + + I
Sbjct: 117 MRVAISREEEKLEAGLPYLATVGSTSPYVGLFGTVWGIMNSFRGLATAQQATLATVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALIATAIGLFAA 190
>gi|241760806|ref|ZP_04758897.1| transporter, MotA/TolQ/ExbB proton channel family [Neisseria
flavescens SK114]
gi|261379269|ref|ZP_05983842.1| TonB system transport protein ExbB [Neisseria subflava NJ9703]
gi|241318703|gb|EER55255.1| transporter, MotA/TolQ/ExbB proton channel family [Neisseria
flavescens SK114]
gi|284797701|gb|EFC53048.1| TonB system transport protein ExbB [Neisseria subflava NJ9703]
Length = 219
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG++G + GI A+ +S+ S + IG +L T +G+ ++
Sbjct: 126 ALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVGLFVA 182
>gi|225075999|ref|ZP_03719198.1| hypothetical protein NEIFLAOT_01026 [Neisseria flavescens
NRL30031/H210]
gi|224952714|gb|EEG33923.1| hypothetical protein NEIFLAOT_01026 [Neisseria flavescens
NRL30031/H210]
Length = 219
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G + P IG++G + GI A+ +S+ S + IG +L T +G+ ++
Sbjct: 126 ALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVGLFVA 182
>gi|183396676|dbj|BAG28275.1| MotA/TolQ/Exb proton channel [Desulfotignum balticum]
Length = 180
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTA 201
++DE + I + AI + P +G++G ++G++ + + + + +
Sbjct: 74 ILDETVMGICTSLDRYLAAIRVLSAVAPLLGLLGTVVGMMHTFEVITVFGTGNARAMAGG 133
Query: 202 IGVSLTGTLLGIILS 216
I V+L T G++++
Sbjct: 134 ISVALITTQTGLMVA 148
>gi|159488103|ref|XP_001702060.1| hypothetical protein CHLREDRAFT_179633 [Chlamydomonas reinhardtii]
gi|158271434|gb|EDO97253.1| predicted protein [Chlamydomonas reinhardtii]
Length = 227
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 23/152 (15%)
Query: 2 STIIG---LFITILCI-IGGFYAMGGNPYILIQPFEIVIVAG------------AGLGGF 45
+T+IG + + + +G + G L PF ++I G A LG
Sbjct: 73 TTLIGPLIIGVAFTAVAVGAALSAGALFTSLFLPFFLLIGFGALFWGGVTFSAFATLGAA 132
Query: 46 VMANPLKVIKDSGVSLL------EIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN 99
++ PL + +G L F A + K ++G E E
Sbjct: 133 LIIKPLMSLMVAGAGLGMGALAVGAFLKPASSRAKASYEEKAAAAKSGAKQQGDVIEVEP 192
Query: 100 HIDDPYNSTIFTSIPTVLENNELTTFICDYMR 131
+ DP +L + E D R
Sbjct: 193 EV-DPEVDRQLREFDELLMDREQQRRKTDRFR 223
>gi|153827559|ref|ZP_01980226.1| tolQ protein [Vibrio cholerae MZO-2]
gi|153828554|ref|ZP_01981221.1| tolQ protein [Vibrio cholerae 623-39]
gi|254292156|ref|ZP_04962927.1| tolQ protein [Vibrio cholerae AM-19226]
gi|297579358|ref|ZP_06941286.1| tolQ protein [Vibrio cholerae RC385]
gi|148875949|gb|EDL74084.1| tolQ protein [Vibrio cholerae 623-39]
gi|149738472|gb|EDM52868.1| tolQ protein [Vibrio cholerae MZO-2]
gi|150421919|gb|EDN13895.1| tolQ protein [Vibrio cholerae AM-19226]
gi|297536952|gb|EFH75785.1| tolQ protein [Vibrio cholerae RC385]
gi|327484393|gb|AEA78800.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
LMA3894-4]
Length = 227
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAA 186
>gi|120554518|ref|YP_958869.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120324367|gb|ABM18682.1| outer membrane transport energization protein ExbB [Marinobacter
aquaeolei VT8]
Length = 221
Score = 37.6 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-- 191
++ N R +IE M+E + +L K ++ + +G++G I+G+I A +
Sbjct: 91 LINNCRREDIEYAMEEGLMEVLPRLEKRTQYLATLANIATLLGLLGTIIGLIAAFTAVAA 150
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+Q +L +I V++ T G++ + L + +++ + + + L+
Sbjct: 151 ADPAQKASLLSESISVAMNTTAFGLMSAIPLLL-FHAVLQTRTNEIVDSFEMAGVKLLNM 209
Query: 249 MN 250
++
Sbjct: 210 VS 211
>gi|330974473|gb|EGH74539.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 242
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 74/187 (39%), Gaps = 25/187 (13%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPY 105
++A+P + I+ + + LL IF G + L + LK R H
Sbjct: 3 LIASPFESIEHAVIWLLVIFSVATWG------LALLKGVQFSRLKSQDRK---FHKQFWA 53
Query: 106 NSTIFTSIPTVLENN--ELTTFICDYMRMIIVGNARSYEI----------ENLMDEEIDI 153
S++ ++ E + Y + + A+++++ E + ++I
Sbjct: 54 ASSLDSAAQLAHEQPGAAARVALAGYAAIQVADGAQAHDLSQSINHQDRLERALRQQIVR 113
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGT 209
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T
Sbjct: 114 ERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVAT 173
Query: 210 LLGIILS 216
+GI ++
Sbjct: 174 GVGIAVA 180
>gi|318604211|emb|CBY25709.1| mota/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 336
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 195 DNNGIKERTAFRLERRVAAISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 254
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 255 QTTNLAVVAPGIAEALLATALGLVAA 280
>gi|121998993|ref|YP_001003780.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121590398|gb|ABM62978.1| Cell division and transport-associated protein TolQ [Halorhodospira
halophila SL1]
Length = 232
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY----HAISHMGESLPAIGIVGAI 181
++ RM A + + + + +L ++ +G P +G+ G +
Sbjct: 89 FQEFSRMRKQSGAPPSAVVEAAHRAMRVSVSRELDNAERHLQFLATVGSVSPYVGLFGTV 148
Query: 182 LGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII------LSYSLCNPLTSQIKSTR 231
GI+ + L+ + + I +L T LG+ ++Y+ ++ +
Sbjct: 149 WGIMNSFRALAGQQQATLATVAPGIAEALIATALGLFAAIPAVIAYNHYANRAERLANRY 208
Query: 232 LKQHRLYIIVKK 243
+ + +
Sbjct: 209 ETFVEEFTSILE 220
>gi|330966843|gb|EGH67103.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 242
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 23/186 (12%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL---------KLLYILMYNLKKGSRNE 96
++A+P + I+ + + LL IF G V K S +
Sbjct: 3 LLASPFESIEHAVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ 62
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE--IENLMDEEIDII 154
+ + D + + + +++ +E + ++I
Sbjct: 63 LAQQQPGAAARVALAGYAAIQ--------VPDGAQANDLSQSINHQDRLERALRQQIVRE 114
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTL 210
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T
Sbjct: 115 RRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATG 174
Query: 211 LGIILS 216
+GI ++
Sbjct: 175 VGIAVA 180
>gi|154174874|ref|YP_001407645.1| biopolymer transport ExbB protein [Campylobacter curvus 525.92]
gi|112802306|gb|EAT99650.1| biopolymer transport ExbB protein [Campylobacter curvus 525.92]
Length = 251
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
I+ ++ EI IL ++ +G S P IG+ G + GI+ + ++ S I
Sbjct: 128 RIKERLEIEILKILSSLKSYVWLLASIGSSSPFIGLFGTVWGIMNSFIGIANANNASLNI 187
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T G++ +
Sbjct: 188 VAPGIAEALFATAFGLMAA 206
>gi|91227607|ref|ZP_01261911.1| TolQ protein [Vibrio alginolyticus 12G01]
gi|269967689|ref|ZP_06181739.1| tolQ protein [Vibrio alginolyticus 40B]
gi|91188500|gb|EAS74793.1| TolQ protein [Vibrio alginolyticus 12G01]
gi|269827776|gb|EEZ82060.1| tolQ protein [Vibrio alginolyticus 40B]
Length = 232
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E ++ +G P IG+ G + GI+ A L + + ++ I
Sbjct: 113 MRVAVSREVDELETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAMGLFAA 186
>gi|326319250|ref|YP_004236922.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323376086|gb|ADX48355.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 222
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ RS ++ ++ + + +L ++ +G + P +G++G + GI A+ L+
Sbjct: 94 LAASGQRSQQLTRVLRDALHRVLARLQFGQVLLATVGSTAPFVGLLGTVWGIYHALTALA 153
Query: 193 QSPKI----LGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRL 232
+ + +G +L T G+ +L+Y+L ++++
Sbjct: 154 GGGAVSIDRVAGPVGEALVMTAAGLAVAIPAVLAYNLFGRWIGRVEADLE 203
>gi|289207776|ref|YP_003459842.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
gi|288943407|gb|ADC71106.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
Length = 214
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLL 211
+E + + + + P +G++G ++G+I+ +++ SP+ L I +L T
Sbjct: 101 HELERYMNTLGTIAMITPLLGLLGTVVGMIEVFTVITEIGVGSPRDLAGGISQALITTAA 160
Query: 212 GIILS 216
GI ++
Sbjct: 161 GIGVA 165
>gi|189426713|ref|YP_001953889.1| tonB-system energizer ExbB [Geobacter lovleyi SZ]
gi|189422972|gb|ACD97369.1| tonB-system energizer ExbB [Geobacter lovleyi SZ]
Length = 144
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGV 204
+E+++ L KL H I+ +G + P IG++G +LGI+ + Q + T + +
Sbjct: 46 KELELALTRKL---HIIATVGSNAPYIGLLGTVLGIMLTFSTMGQQGFVDATKIMTGLAL 102
Query: 205 SLTGTLLGIILS 216
+L T +G++++
Sbjct: 103 ALKATAIGLVVA 114
>gi|161524253|ref|YP_001579265.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189350990|ref|YP_001946618.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221214855|ref|ZP_03587824.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
gi|160341682|gb|ABX14768.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189335012|dbj|BAG44082.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221165394|gb|EED97871.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
Length = 243
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGMTGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|53720371|ref|YP_109357.1| putative TolQ transport transmembrane protein [Burkholderia
pseudomallei K96243]
gi|76811339|ref|YP_334625.1| tolQ protein [Burkholderia pseudomallei 1710b]
gi|52210785|emb|CAH36769.1| putative TolQ transport transmembrane protein [Burkholderia
pseudomallei K96243]
gi|76580792|gb|ABA50267.1| tolQ protein [Burkholderia pseudomallei 1710b]
Length = 262
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 47/174 (27%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 71 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 128
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + L MR +++ + ++
Sbjct: 129 EFLKAKEKRLSDPALLLDGARRAMRASFQREMD------VLESNL-----------SFLA 171
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 172 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 225
>gi|325122006|gb|ADY81529.1| hypothetical protein BDGL_000943 [Acinetobacter calcoaceticus
PHEA-2]
Length = 211
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEVAASQEISYLEKNINFLGTLSAVAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 148 PGISKALITTAVGMLIA 164
>gi|320107205|ref|YP_004182795.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
gi|319925726|gb|ADV82801.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
Length = 262
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 147 MDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----IL 198
++ E L + ++ + + P IG+ G ++GII A L + +
Sbjct: 129 LERAAQTAASEALSGMESRLTWLATIAAAAPFIGLFGTVMGIIDAFHGLGTAGAATLRAV 188
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T G++++
Sbjct: 189 APGISEALITTAAGLVVA 206
>gi|53804467|ref|YP_113690.1| tolQ protein [Methylococcus capsulatus str. Bath]
gi|53758228|gb|AAU92519.1| tolQ protein [Methylococcus capsulatus str. Bath]
Length = 225
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ ++ E+D + ++ +G + P IG+ G + GI+ + +L + ++
Sbjct: 113 MRVALNRELDKLDERLP----FLATVGSTSPYIGLFGTVWGIMNSFRSLGSVKQATLAMV 168
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
I +L T +G+ + ++ + + Y + L++ ++
Sbjct: 169 APGISEALVATAMGLFAAIPAVI-AYNRYSTNISRLANRYESFTEELLSLLHRQA 222
>gi|39936341|ref|NP_948617.1| putative enterochelin uptake protein ExbB [Rhodopseudomonas
palustris CGA009]
gi|39650196|emb|CAE28719.1| putative exbB, uptake of enterochelin; tonB-dependent uptake of B
colicins [Rhodopseudomonas palustris CGA009]
Length = 311
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLL 211
++ ++ +G P +G+ G + GI+ A +SQ + ++ I +L T
Sbjct: 192 RRLMRGTGLLATVGAVSPFVGLFGTVWGIMNAFIGISQSHTTNLAVVAPGIAEALLATAF 251
Query: 212 GIILS 216
G++ +
Sbjct: 252 GLVAA 256
>gi|88802049|ref|ZP_01117577.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter irgensii
23-P]
gi|88782707|gb|EAR13884.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter irgensii
23-P]
Length = 240
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K +S P +G +G ++G+I A ++Q SP ++ I V+L T+ G++
Sbjct: 142 EKNVSWLSLFIALAPMLGFMGTVIGMIGAFDAIAQANDISPSVVAVGIKVALLTTVFGLV 201
Query: 215 LS 216
++
Sbjct: 202 VA 203
>gi|242239531|ref|YP_002987712.1| hypothetical protein Dd703_2103 [Dickeya dadantii Ech703]
gi|242131588|gb|ACS85890.1| hypothetical protein Dd703_2103 [Dickeya dadantii Ech703]
Length = 737
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQ-PFEIVIVAGAGLGGFVMANPLKVI 54
+ ++IG + + I+ G GN + + + +V G + + A L +I
Sbjct: 477 IFSVIGSIGSFVSIVAGNV---GNLIAIFEFLSPLFMVIGGTIISAISAISLPII 528
>gi|254445128|ref|ZP_05058604.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198259436|gb|EDY83744.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 462
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---- 191
+ +E ++ E + + ++ IS P +G++G + G+I +
Sbjct: 342 SDHDPELVEEILYESMVDTQPKVMRLLPFISVTAAVAPLLGLLGTVTGMINTFNRIKIFG 401
Query: 192 SQSPKILGTAIGVSLTGTLLGIILS 216
+ K L I +L T G+I++
Sbjct: 402 TGDAKSLSGGISEALITTEFGLIVA 426
>gi|163786595|ref|ZP_02181043.1| MotA/TolQ/ExbB proton channel family protein [Flavobacteriales
bacterium ALC-1]
gi|159878455|gb|EDP72511.1| MotA/TolQ/ExbB proton channel family protein [Flavobacteriales
bacterium ALC-1]
Length = 256
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
+ K IS P +G +G ++G+I+A + P ++ I V+L T+ G
Sbjct: 156 QLEKNVSWISLFIALAPMLGFMGTVIGMIQAFDKIEAAGDMQPSLVAGGIKVALLTTVFG 215
Query: 213 IILS 216
+I++
Sbjct: 216 LIVA 219
>gi|28871120|ref|NP_793739.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|66044660|ref|YP_234501.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|213969188|ref|ZP_03397327.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|237800221|ref|ZP_04588682.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
gi|257487007|ref|ZP_05641048.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289626499|ref|ZP_06459453.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289650945|ref|ZP_06482288.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. 2250]
gi|289674674|ref|ZP_06495564.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
gi|298488206|ref|ZP_07006242.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|301384817|ref|ZP_07233235.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato
Max13]
gi|302063529|ref|ZP_07255070.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato K40]
gi|302130607|ref|ZP_07256597.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|302187154|ref|ZP_07263827.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
gi|28854370|gb|AAO57434.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|63255367|gb|AAY36463.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|213926186|gb|EEB59742.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|298157264|gb|EFH98348.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330868615|gb|EGH03324.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330872650|gb|EGH06799.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330892243|gb|EGH24904.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. mori str.
301020]
gi|330896131|gb|EGH28352.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330936715|gb|EGH40902.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
gi|330950606|gb|EGH50866.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
gi|330959268|gb|EGH59528.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330964827|gb|EGH65087.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330968888|gb|EGH68954.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330988972|gb|EGH87075.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331009351|gb|EGH89407.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331016442|gb|EGH96498.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. lachrymans
str. M302278PT]
gi|331023078|gb|EGI03135.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 231
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M I + ++ +G + P +G+ G + GI+ + L+ + + I
Sbjct: 117 MRVAISREEEKLEAGLPYLATVGSTSPYVGLFGTVWGIMNSFRGLATAQQATLATVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALIATAIGLFAA 190
>gi|88861317|ref|ZP_01135948.1| inner membrane protein [Pseudoalteromonas tunicata D2]
gi|88816696|gb|EAR26520.1| inner membrane protein [Pseudoalteromonas tunicata D2]
Length = 230
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + + ++ +G P IG+ G + GI+ A L Q + +++ I
Sbjct: 113 MRVALSREMEKLESSLSFLATVGSISPYIGLFGTVWGIMNAFIALGQVKQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILSYSLCNP---LTSQIKSTRLKQHRLYI 239
+L T +G+ + +++
Sbjct: 173 AEALIATAMGLFAAIPAVIAYNRFAHKVEKIESSYGNFME 212
>gi|319409303|emb|CBI82947.1| Biopolymer transport exbB protein [Bartonella schoenbuchensis R1]
Length = 246
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----K 196
+ L+ + ++ +G P +G+ + GI+ A ++Q+
Sbjct: 120 ERVHLLLARCVLTATRHMACGTAVLATIGAIAPFVGLFATVWGIMNAFIGIAQTQTTRLD 179
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ ++
Sbjct: 180 VVAPGIAEALLATAIGLFVA 199
>gi|119897759|ref|YP_932972.1| biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119670172|emb|CAL94085.1| conserved hypothetical biopolymer transport protein ExbB [Azoarcus
sp. BH72]
Length = 202
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G ++M E I+ +++E + + + P +G+ G ++G+I+
Sbjct: 72 RVLAAGLRNIGASRDVMKESIEETGRAVVHELERFLTTLGTIASVAPLLGLFGTVIGMIE 131
Query: 187 AMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + L I ++L T G++++
Sbjct: 132 IFASQGISGANTAQLAHGISLALYATGFGLVIA 164
>gi|238789157|ref|ZP_04632945.1| TonB complex protein [Yersinia frederiksenii ATCC 33641]
gi|238722689|gb|EEQ14341.1| TonB complex protein [Yersinia frederiksenii ATCC 33641]
Length = 333
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 192 DNNGIKERTAFRLERRVAAISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 251
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 252 QTTNLAVVAPGIAEALLATALGLVAA 277
>gi|37527796|ref|NP_931141.1| biopolymer transport protein ExbB [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787232|emb|CAE16313.1| Biopolymer transport protein ExbB [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 344
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAI 202
++ + I + ++ +G P +G+ G + GI+ + + + + ++ I
Sbjct: 227 LERSVAAISRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGI 286
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 287 AEALLATALGLVAA 300
>gi|113460596|ref|YP_718661.1| hypothetical protein HS_0451 [Haemophilus somnus 129PT]
gi|112822639|gb|ABI24728.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 589
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 50/133 (37%), Gaps = 14/133 (10%)
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEE---IDIILYEKLKPYHAISHMGESLPAI--- 175
+ FI ++++ + Y L+ + L + + + E P +
Sbjct: 1 MLAFIENFLKSLSSSTITEYFFWILLGIAVLGLLTFLISRKHYHSQFTKFAEYTPVLLTS 60
Query: 176 -GIVGAILGIIKAMGN-----LSQSPKILGTAIGVSLTGTLLGIILSYS--LCNPLTSQI 227
GI+G GI+ + N + S L + + +++G+ LS + L ++
Sbjct: 61 VGILGTFTGIVAGLLNFDIHQIDNSISSLLEGMKTAFFTSVIGVALSILLKIIYTLVGKV 120
Query: 228 KSTRLKQHRLYII 240
K+ + + + I
Sbjct: 121 KNEKKRDVDIEEI 133
>gi|224370142|ref|YP_002604306.1| TolQ1 [Desulfobacterium autotrophicum HRM2]
gi|223692859|gb|ACN16142.1| TolQ1 [Desulfobacterium autotrophicum HRM2]
Length = 236
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
++ + I++ + + ++ G + P IG+ G + GI+ + S S ++
Sbjct: 117 VKRALRRSINLEVRRLSQLVPFLATAGNTAPFIGLFGTVWGIMNTFHGIGTTGSASLAVV 176
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T G+ ++
Sbjct: 177 APGISEALVATAAGLAVA 194
>gi|170702371|ref|ZP_02893263.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|170132730|gb|EDT01166.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
Length = 243
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGISRMQAG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|209964014|ref|YP_002296929.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
gi|209957480|gb|ACI98116.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
Length = 337
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
+ ++ + ++ +G + P +G+ G + GI A+ + S + +
Sbjct: 219 LQRTVETTQSRLQEGLAFLATVGSTAPFVGLFGTVWGIYHALVAIGLSGQASIDKVAGPV 278
Query: 203 GVSLTGTLLGIILS 216
G +L T +G+ ++
Sbjct: 279 GEALIMTAIGLAVA 292
>gi|148560345|ref|YP_001259552.1| protein TolQ [Brucella ovis ATCC 25840]
gi|148371602|gb|ABQ61581.1| protein TolQ [Brucella ovis ATCC 25840]
Length = 236
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + + ++ +G + P IG+ G ++GI+ + + + S
Sbjct: 112 QMRIDKAMDVALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLLAA 192
>gi|330876907|gb|EGH11056.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 242
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 23/186 (12%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL---------KLLYILMYNLKKGSRNE 96
++A+P + I+ + + LL IF G V K S +
Sbjct: 3 LLASPFESIEHAVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ 62
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE--IENLMDEEIDII 154
+ + D + + + +++ +E + ++I
Sbjct: 63 LAQEQPGAAARVALAGYAAIQ--------VPDGAQANDLSQSINHQDRLERALRQQIVRE 114
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTL 210
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T
Sbjct: 115 RRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATG 174
Query: 211 LGIILS 216
+GI ++
Sbjct: 175 VGIAVA 180
>gi|153832499|ref|ZP_01985166.1| protein TolQ [Vibrio harveyi HY01]
gi|156973897|ref|YP_001444804.1| hypothetical protein VIBHAR_01607 [Vibrio harveyi ATCC BAA-1116]
gi|148871294|gb|EDL70166.1| protein TolQ [Vibrio harveyi HY01]
gi|156525491|gb|ABU70577.1| hypothetical protein VIBHAR_01607 [Vibrio harveyi ATCC BAA-1116]
Length = 232
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGLFAA 186
>gi|254787338|ref|YP_003074767.1| protein TolQ [Teredinibacter turnerae T7901]
gi|237685839|gb|ACR13103.1| protein TolQ [Teredinibacter turnerae T7901]
Length = 229
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
++ R+ G+ I + + + + A ++ + P IG+ G +
Sbjct: 91 FKEFTRLRQQGSTDPDAIMEGTQRAMRVAHSREEEKLEANLPFLASVASVSPYIGLFGTV 150
Query: 182 LGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
GI+ + L+ + + I +L T +G+ +
Sbjct: 151 WGIMNSFRGLANVHQATLATVAPGISEALVATAMGLFAA 189
>gi|221198506|ref|ZP_03571552.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
gi|221208544|ref|ZP_03581545.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221171535|gb|EEE03981.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221182438|gb|EEE14839.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
Length = 243
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQSG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLAIGMTGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|108762516|ref|YP_633890.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108466396|gb|ABF91581.1| transporter, MotA/TolQ/ExbB proton channel family [Myxococcus
xanthus DK 1622]
Length = 236
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 50/146 (34%), Gaps = 7/146 (4%)
Query: 76 CDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIF-TSIPTVLENNELTTFICDYMRMII 134
L L + + +T +D S +F + + + +
Sbjct: 55 AQSLTFLDTFWKASRLEAIYQTAQKLDGSPLSKVFCAGYEELTKLAQAKEGGTEGALAER 114
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+G + +E + + E + +G + P +G+ G ++GI+ A +++
Sbjct: 115 LGGIEN--VERALHRASTAQITELENRVSFLGTVGAASPFVGLFGTVIGILSAFNQIAEQ 172
Query: 195 P----KILGTAIGVSLTGTLLGIILS 216
+ +G +L T G+ +
Sbjct: 173 GNATLATVAAPVGNALFATAAGLFAA 198
>gi|167753803|ref|ZP_02425930.1| hypothetical protein ALIPUT_02088 [Alistipes putredinis DSM 17216]
gi|167658428|gb|EDS02558.1| hypothetical protein ALIPUT_02088 [Alistipes putredinis DSM 17216]
Length = 263
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
I P +G +G ++G+I+A + SP ++ I V+L TLLG
Sbjct: 163 RMESGLSWIGLFIALSPMLGFMGTVVGMIEAFDAIQAAGDISPTLVAGGIKVALLTTLLG 222
Query: 213 IILS---YSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
+I + N + S+I S I + L AY
Sbjct: 223 LIAAVILQLFYNYIVSKIDSLVNDMEDSSITLMDILTAY 261
>gi|312171024|emb|CBX79283.1| Biopolymer transport exbB protein [Erwinia amylovora ATCC BAA-2158]
Length = 244
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + I + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 103 DNNGIKERTAFRLERRVAAIGRHAGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQT 162
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 163 QTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|229000253|ref|ZP_04159822.1| hypothetical protein bmyco0003_48060 [Bacillus mycoides Rock3-17]
gi|229007776|ref|ZP_04165364.1| hypothetical protein bmyco0002_46550 [Bacillus mycoides Rock1-4]
gi|228753484|gb|EEM02934.1| hypothetical protein bmyco0002_46550 [Bacillus mycoides Rock1-4]
gi|228759585|gb|EEM08562.1| hypothetical protein bmyco0003_48060 [Bacillus mycoides Rock3-17]
Length = 611
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 73/186 (39%), Gaps = 24/186 (12%)
Query: 71 GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
+D+ LL + R +T+ ++D ++I ++ + I
Sbjct: 45 FKDSLTQQTNLLSYNLKQEFAKEREKTDPPLEDALKTSITDFASDRKKDIQEVRVIDPNR 104
Query: 131 RMIIVGNARSYEI-----------ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
R++ + N+ + ++ ++ + + + K H + M P G G
Sbjct: 105 RLLAISNSSKQGMVGKTITDITVQRAIVQKKAEGKIEKDGKTGHRVQVMAT--PIEGEKG 162
Query: 180 AILGIIKAMGNLSQSPKIL---------GTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
I+G+I + ++ K + GT I + L +LGI+L+ ++ P++ ++
Sbjct: 163 KIIGVIHIVASMEDVYKQMKDINQIFATGTVIAL-LVTAVLGILLAQTITRPISD-MRRQ 220
Query: 231 RLKQHR 236
++ +
Sbjct: 221 AIEMAK 226
>gi|94985854|ref|YP_605218.1| MotA/TolQ/ExbB proton channel [Deinococcus geothermalis DSM 11300]
gi|94556135|gb|ABF46049.1| MotA/TolQ/ExbB proton channel [Deinococcus geothermalis DSM 11300]
Length = 230
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAIGVSLTGTLLGIILSYS 218
A+ + P +G++G ++G++++ S +P L T I +L T G+I++
Sbjct: 112 SALGTAAQIAPLLGLLGTVIGMVRSFLVFSSTTSPTPGQLATGISEALINTAGGLIVA-- 169
Query: 219 LCNPLT-SQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKV 264
+ + + +++ + V++ L A++ P+ GR V
Sbjct: 170 IVAYVARNALRAKADRIATQAERVREELPAWL---APRTLTPAGRSV 213
>gi|310766368|gb|ADP11318.1| biopolymer transport protein ExbB [Erwinia sp. Ejp617]
Length = 244
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + I + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 103 DNNGIKERTAFRLERRVAAIGRHAGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQT 162
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 163 QTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|92113973|ref|YP_573901.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91797063|gb|ABE59202.1| Cell division and transport-associated protein TolQ
[Chromohalobacter salexigens DSM 3043]
Length = 225
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 55/144 (38%), Gaps = 8/144 (5%)
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY---HAISHMGE 170
++ + + ++ R++ + +E + + + E+ + ++ +
Sbjct: 71 ESLGAEHVFRSGFREFNRLMAKTQSTEAVLEGVQRGQRVALSREEDRLQLHLTFLATVAS 130
Query: 171 SLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQ 226
+ P IG+ G + GI+ + +LS + + I +L T +G+ + ++
Sbjct: 131 ATPYIGLFGTVWGIMGSFQSLSMAQQATLSTVAPWIAEALVATAMGLFAAIPAVI-FYNR 189
Query: 227 IKSTRLKQHRLYIIVKKALIAYMN 250
+ + + Y + A ++
Sbjct: 190 LSAHATRLLGKYENFAEEFHAILH 213
>gi|33318339|gb|AAQ05037.1|AF468825_1 ExbB [Pasteurella multocida]
gi|40556682|gb|AAC83228.2| ExbB [Pasteurella multocida]
Length = 152
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIG 203
E+DI L L AIS +G + P +G++G ++GI+ L + +
Sbjct: 50 HELDIDLQRHLT---AISTIGSNAPYVGLLGTVIGILLTFYELGHSGGDIDAAAIMVHLS 106
Query: 204 VSLTGTLLGIILS 216
++L T +GI+++
Sbjct: 107 LALKATAVGILVA 119
>gi|218927873|ref|YP_002345748.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis CO92]
gi|115346484|emb|CAL19358.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis CO92]
Length = 237
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 96 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 155
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 156 QTTNLAVIAPGIAEALLATALGLVAA 181
>gi|85713413|ref|ZP_01044410.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85692763|gb|EAQ30764.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 234
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 5/111 (4%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M L + ++ +G P IG+ G + GI+ A L + ++ I
Sbjct: 113 MRVAHARELEKLDANLGILATIGSISPYIGLFGTVWGIMNAFIALGAVKQATLAMVAPGI 172
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+L T +G+ + ++ + K Y+ +A +
Sbjct: 173 AEALIATAMGLFAAIPAVI-AYNRFTNRVEKVDNQYMNFIDEFVAILQRQS 222
>gi|327403103|ref|YP_004343941.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
gi|327318611|gb|AEA43103.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
Length = 266
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 175 IGIVGAILGIIKAMGNLSQ---SPKILGTAIGVSLTGTLLGIILS 216
IG++G +LG+IK+ + + L I +L T LGI S
Sbjct: 186 IGLIGTVLGMIKSFQAMGEGTPDTTKLSVGISEALINTFLGIFAS 230
>gi|294794351|ref|ZP_06759487.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
3_1_44]
gi|294454681|gb|EFG23054.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
3_1_44]
Length = 203
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQSP 195
+++ M++ + + + +S + P +G++G + G+I + G P
Sbjct: 85 DRNVLQSKMEDMVAHVYTHASRGLDWLSTIVTIAPLLGLLGTVTGMIGAFQVFGADGAVP 144
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ +G +L T G+ ++
Sbjct: 145 TAITGGVGEALVATASGLCVA 165
>gi|269793120|ref|YP_003318024.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100755|gb|ACZ19742.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 206
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 15/105 (14%)
Query: 147 MDEEIDIILYEKL----KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGT-- 200
M E +I + E+L K I P +G++G +LG++ G + + G
Sbjct: 89 MREAAEIAIREELFLLSKGLSTIEWAARIAPMLGLLGTVLGMVDMFGAIGTAGASSGAVA 148
Query: 201 -AIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL----KQHRLYII 240
I +L T+ G+ + P ++ ++ ++ RL I
Sbjct: 149 LGIRKALYTTVAGLCCA----IPASAMLRLLDHLIDAEEERLRRI 189
>gi|256823158|ref|YP_003147121.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
gi|256796697|gb|ACV27353.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
Length = 447
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
N +E +DE + + + I + P +G++G ++G+I+ ++ +
Sbjct: 327 NEDVENLELKLDEAVLKETPRIERGVNLIKVIAALGPLLGLLGTVVGMIEVFQSITLYGT 386
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
PK + I +L T+ G++ +
Sbjct: 387 GDPKTMADGISQALVTTVWGLLAA 410
>gi|167036213|ref|YP_001671444.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
gi|166862701|gb|ABZ01109.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
Length = 239
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 58/176 (32%), Gaps = 18/176 (10%)
Query: 45 FVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDP 104
++ + + V + + K + + S E + + P
Sbjct: 18 LLVGFSVVTWGLALVKVAQFVRLKNQDKRFHQQ-------FWAASSLDSAAELSHELPGP 70
Query: 105 YNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA 164
+ + + + + +E + ++I
Sbjct: 71 AARVAQSGYAAIAVGDTQANDLSHAINH-------QDRLERALRQQIVRERRSLETGLAV 123
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI++A+ + S S + + IG +L T +GI ++
Sbjct: 124 VASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVA 179
>gi|157963337|ref|YP_001503371.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157848337|gb|ABV88836.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 172
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ +L + Y L+ ++ + P +G++G + G+I P
Sbjct: 68 QRLRSLALRQAQAQQYGDLQGVKLLAMVA---PLLGLLGTVSGMIAMFDAGGNYGFHDPA 124
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +++ T G+ +
Sbjct: 125 VISAGISMAMVTTQTGLFVG 144
>gi|26249572|ref|NP_755612.1| biopolymer transport protein ExbB [Escherichia coli CFT073]
gi|306816653|ref|ZP_07450785.1| biopolymer transport protein ExbB [Escherichia coli NC101]
gi|26109980|gb|AAN82185.1|AE016766_273 Biopolymer transport exbB protein [Escherichia coli CFT073]
gi|305850218|gb|EFM50677.1| biopolymer transport protein ExbB [Escherichia coli NC101]
Length = 244
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 64/171 (37%), Gaps = 20/171 (11%)
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
+ + V IF K++ LK L+ + ++ N I + S +
Sbjct: 30 LILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQA---NDIAADFGSKSLSLY 86
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMG 169
NEL + G+ + I+ ++ + + + + ++ +G
Sbjct: 87 LLNEAQNELE---------LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIG 137
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
P +G+ G + GI+ + ++Q + ++ I +L T +G++ +
Sbjct: 138 AISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|86135219|ref|ZP_01053801.1| biopolymer transport protein [Polaribacter sp. MED152]
gi|85822082|gb|EAQ43229.1| biopolymer transport protein [Polaribacter sp. MED152]
Length = 240
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
+ K IS P +G +G ++G+I A ++ SP ++ I V+L T+ G
Sbjct: 140 QLEKNVSWISLFIALAPMLGFMGTVIGMIGAFNDIAVANDISPAVVAGGIKVALLTTVFG 199
Query: 213 IILS 216
+I++
Sbjct: 200 LIVA 203
>gi|115352289|ref|YP_774128.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|115282277|gb|ABI87794.1| outer membrane transport energization protein ExbB [Burkholderia
ambifaria AMMD]
Length = 243
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGISRMQAG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|332529071|ref|ZP_08405036.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
gi|332041515|gb|EGI77876.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
Length = 242
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 46/134 (34%), Gaps = 6/134 (4%)
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFI--CDYMRMIIVGNARSYEIENL 146
+ E N ++ P + + L + + + S +
Sbjct: 57 WRSTDLAEGLNRLNLPKDRHPQDNFFRALAEEGREAALHHRNAKAQLHDSLDVSDWVTRS 116
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
+ ID + ++ +G + P IG+ G + GI A+ ++ S + I
Sbjct: 117 LRNSIDNATAKLQGGLAVLATVGSTSPFIGLFGTVWGIYHALLSIGASGQASIDQVAGPI 176
Query: 203 GVSLTGTLLGIILS 216
G +L T G+ ++
Sbjct: 177 GEALIMTAFGLAVA 190
>gi|281357073|ref|ZP_06243563.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
gi|281316631|gb|EFB00655.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
Length = 353
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R + +A+ IE +++ E+ + + ++ + P G+ G + G++ A
Sbjct: 118 RPSRLSDAQYNAIEAVLEREVSSQIQQLETRIGFLATLVSVSPFCGLFGTVWGVMLAFCG 177
Query: 191 LSQSPK----ILGTAIGVSLTGTLLGIILS 216
++ + K L + +L T+ G+I++
Sbjct: 178 IAAAGKSDFTALAPGVAGALLTTVAGLIVA 207
>gi|269963135|ref|ZP_06177470.1| tolQ protein [Vibrio harveyi 1DA3]
gi|269832099|gb|EEZ86223.1| tolQ protein [Vibrio harveyi 1DA3]
Length = 232
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGLFAA 186
>gi|228994184|ref|ZP_04154084.1| hypothetical protein bpmyx0001_49070 [Bacillus pseudomycoides DSM
12442]
gi|228765636|gb|EEM14290.1| hypothetical protein bpmyx0001_49070 [Bacillus pseudomycoides DSM
12442]
Length = 611
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 73/186 (39%), Gaps = 24/186 (12%)
Query: 71 GQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM 130
+D+ LL + R +T+ ++D ++I ++ + I
Sbjct: 45 FKDSLTQQTNLLSYNLKQEFAKEREKTDPPLEDALKTSITDFASDRKKDIQEVRVIDPNR 104
Query: 131 RMIIVGNARSYEI-----------ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVG 179
R++ + N+ + ++ ++ + + + K H + M P G G
Sbjct: 105 RLLAISNSSKQGMVGKTITDITVQRAIVQKKAEGKIEKDGKTGHRVQVMAT--PIEGEKG 162
Query: 180 AILGIIKAMGNLSQSPKIL---------GTAIGVSLTGTLLGIILSYSLCNPLTSQIKST 230
I+G+I + ++ K + GT I + L +LGI+L+ ++ P++ ++
Sbjct: 163 KIIGVIHIVASMEDVYKQMKDINQIFATGTVIAL-LVTAVLGILLAQTITRPISD-MRRQ 220
Query: 231 RLKQHR 236
++ +
Sbjct: 221 AIEMAK 226
>gi|254444574|ref|ZP_05058050.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198258882|gb|EDY83190.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 202
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----- 196
++ + MDE L + + + P G++G + G++ LS S
Sbjct: 84 DVRDRMDEIRSSHLSRINSRIRFAAILVGTAPLTGLLGTVTGMLSTFAGLSNSAAGNTVD 143
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T G++L+
Sbjct: 144 LVAGGISEALITTQTGLVLA 163
>gi|160901437|ref|YP_001567019.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160367021|gb|ABX38634.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 244
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS----PKILGTAI 202
+ + + ++ ++ +G + P +G++G + GI A+ L+ S + L +
Sbjct: 112 LRQALQSASHQLQWGQTLLATVGATAPFVGLLGTVWGIHHALATLAGSGQIGIEQLAGPV 171
Query: 203 GVSLTGTLLGI------ILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
G +L T G+ +L+Y+L +Q+++ +
Sbjct: 172 GEALVMTAAGLAVALPAVLAYNLLGRAAAQMEALLEGFAHDLQAM 216
>gi|312882594|ref|ZP_07742334.1| hypothetical protein VIBC2010_09537 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369754|gb|EFP97266.1| hypothetical protein VIBC2010_09537 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 232
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L Q + + I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFMELGQVKQATLATVAPGIAEALIATAMGLFAA 186
>gi|91781926|ref|YP_557132.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Burkholderia xenovorans LB400]
gi|91685880|gb|ABE29080.1| Cell division and transport-associated protein TolQ [Burkholderia
xenovorans LB400]
Length = 225
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 46/174 (26%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARTQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + + MR E ++
Sbjct: 92 EFLKGKEKRLNDPSAILDGARRAMRAAFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ A L+ + + I +LT T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGLFAA 188
>gi|86134191|ref|ZP_01052773.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter sp.
MED152]
gi|85821054|gb|EAQ42201.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter sp.
MED152]
Length = 229
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SP 195
+I ++ + +YE K ++ + + P IG +G ++G+I A+ ++
Sbjct: 113 EDINTAIETTGKLEIYELEKNVSVLATVAGAAPMIGFLGTVIGMIVAIHEIANAGGQIDI 172
Query: 196 KILGTAIGVSLTGTLLGIILS 216
K+L + ++T T+ G+I+
Sbjct: 173 KMLSDGLYTAMTTTVAGLIVG 193
>gi|298370159|ref|ZP_06981475.1| biopolymer transport protein ExbB [Neisseria sp. oral taxon 014
str. F0314]
gi|298281619|gb|EFI23108.1| biopolymer transport protein ExbB [Neisseria sp. oral taxon 014
str. F0314]
Length = 219
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+++ +G + P IG+ G + GI A+ N+SQ S + IG +L T G+ ++
Sbjct: 126 SLASIGATAPFIGLFGTVWGIYHALINISQSGQMSIAAVAGPIGEALVSTAAGLFVA 182
>gi|295110190|emb|CBL24143.1| hypothetical protein [Ruminococcus obeum A2-162]
Length = 543
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Query: 93 SRNETENHIDDPYNSTIFTSIPTV--LENNELTTFICDYMRMIIVGNARSYE----IENL 146
+ + + ++D + + V L ++ M+ A+S E IE
Sbjct: 64 ALKDAADELEDAFKMPGRVAPDKVASLNGIFHHAYLDGKMKAFTDSIAKSQEGIVDIEEF 123
Query: 147 M-DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM--------GNLSQSPKI 197
+ ++++D+ ++++L + + +IGI+G +G++ + ++ S
Sbjct: 124 LNEDDLDMHVHKRL-----LEMAPDLFTSIGILGTFVGLVWGLKDFQPSDYAAMTSSVSS 178
Query: 198 LGTAIGVSLTGTLLGIILS 216
L I V+ ++ GI S
Sbjct: 179 LVDGIKVAFLTSIYGIAFS 197
>gi|254719703|ref|ZP_05181514.1| protein TolQ [Brucella sp. 83/13]
gi|265984717|ref|ZP_06097452.1| TolQ protein [Brucella sp. 83/13]
gi|306837838|ref|ZP_07470700.1| protein TolQ [Brucella sp. NF 2653]
gi|306841419|ref|ZP_07474121.1| protein TolQ [Brucella sp. BO2]
gi|306844692|ref|ZP_07477277.1| protein TolQ [Brucella sp. BO1]
gi|264663309|gb|EEZ33570.1| TolQ protein [Brucella sp. 83/13]
gi|306274864|gb|EFM56634.1| protein TolQ [Brucella sp. BO1]
gi|306288525|gb|EFM59877.1| protein TolQ [Brucella sp. BO2]
gi|306407077|gb|EFM63294.1| protein TolQ [Brucella sp. NF 2653]
Length = 236
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + + ++ +G + P IG+ G ++GI+ + + + S
Sbjct: 112 QMRIDKAMDVALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLLAA 192
>gi|294783464|ref|ZP_06748788.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
gi|294480342|gb|EFG28119.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
Length = 193
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIG 203
++ I+ I + + +S + P +G++G + G+I A ++ + IL I
Sbjct: 88 EKAIEQIKH-LERNMWLLSLAANASPLLGLLGTVTGMITAFNSIALNGTGDAGILAKGIS 146
Query: 204 VSLTGTLLGIILS 216
+L T G+ ++
Sbjct: 147 EALYTTAGGLFVA 159
>gi|17986619|ref|NP_539253.1| TOLQ protein [Brucella melitensis bv. 1 str. 16M]
gi|23502558|ref|NP_698685.1| tolQ protein [Brucella suis 1330]
gi|62290572|ref|YP_222365.1| TolQ protein [Brucella abortus bv. 1 str. 9-941]
gi|82700488|ref|YP_415062.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|161619629|ref|YP_001593516.1| protein TolQ [Brucella canis ATCC 23365]
gi|163845279|ref|YP_001622934.1| protein TolQ [Brucella suis ATCC 23445]
gi|189024790|ref|YP_001935558.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225628268|ref|ZP_03786302.1| protein TolQ [Brucella ceti str. Cudo]
gi|225853155|ref|YP_002733388.1| protein TolQ [Brucella melitensis ATCC 23457]
gi|237816077|ref|ZP_04595073.1| protein TolQ [Brucella abortus str. 2308 A]
gi|254689868|ref|ZP_05153122.1| protein TolQ [Brucella abortus bv. 6 str. 870]
gi|254694361|ref|ZP_05156189.1| protein TolQ [Brucella abortus bv. 3 str. Tulya]
gi|254698019|ref|ZP_05159847.1| protein TolQ [Brucella abortus bv. 2 str. 86/8/59]
gi|254700361|ref|ZP_05162189.1| protein TolQ [Brucella suis bv. 5 str. 513]
gi|254703478|ref|ZP_05165306.1| protein TolQ [Brucella suis bv. 3 str. 686]
gi|254708432|ref|ZP_05170260.1| protein TolQ [Brucella pinnipedialis M163/99/10]
gi|254708714|ref|ZP_05170525.1| protein TolQ [Brucella pinnipedialis B2/94]
gi|254714561|ref|ZP_05176372.1| protein TolQ [Brucella ceti M644/93/1]
gi|254717458|ref|ZP_05179269.1| protein TolQ [Brucella ceti M13/05/1]
gi|254730903|ref|ZP_05189481.1| protein TolQ [Brucella abortus bv. 4 str. 292]
gi|256030240|ref|ZP_05443854.1| protein TolQ [Brucella pinnipedialis M292/94/1]
gi|256045310|ref|ZP_05448204.1| protein TolQ [Brucella melitensis bv. 1 str. Rev.1]
gi|256061737|ref|ZP_05451874.1| protein TolQ [Brucella neotomae 5K33]
gi|256114268|ref|ZP_05455013.1| protein TolQ [Brucella melitensis bv. 3 str. Ether]
gi|256160415|ref|ZP_05458104.1| protein TolQ [Brucella ceti M490/95/1]
gi|256255621|ref|ZP_05461157.1| protein TolQ [Brucella ceti B1/94]
gi|256258122|ref|ZP_05463658.1| protein TolQ [Brucella abortus bv. 9 str. C68]
gi|256263353|ref|ZP_05465885.1| TolQ protein [Brucella melitensis bv. 2 str. 63/9]
gi|256370109|ref|YP_003107620.1| biopolymer transport protein TolQ [Brucella microti CCM 4915]
gi|260167915|ref|ZP_05754726.1| biopolymer transport protein TolQ [Brucella sp. F5/99]
gi|260565799|ref|ZP_05836282.1| TolQ protein [Brucella melitensis bv. 1 str. 16M]
gi|260568785|ref|ZP_05839253.1| TolQ protein [Brucella suis bv. 4 str. 40]
gi|260755399|ref|ZP_05867747.1| TolQ protein [Brucella abortus bv. 6 str. 870]
gi|260758621|ref|ZP_05870969.1| TolQ protein [Brucella abortus bv. 4 str. 292]
gi|260762453|ref|ZP_05874790.1| TolQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884415|ref|ZP_05896029.1| TolQ protein [Brucella abortus bv. 9 str. C68]
gi|261214670|ref|ZP_05928951.1| TolQ protein [Brucella abortus bv. 3 str. Tulya]
gi|261219289|ref|ZP_05933570.1| TolQ protein [Brucella ceti M13/05/1]
gi|261222824|ref|ZP_05937105.1| TolQ protein [Brucella ceti B1/94]
gi|261315932|ref|ZP_05955129.1| biopolymer transporter TolQ [Brucella pinnipedialis M163/99/10]
gi|261316205|ref|ZP_05955402.1| TolQ protein [Brucella pinnipedialis B2/94]
gi|261322350|ref|ZP_05961547.1| TolQ protein [Brucella ceti M644/93/1]
gi|261325741|ref|ZP_05964938.1| TolQ protein [Brucella neotomae 5K33]
gi|261750855|ref|ZP_05994564.1| TolQ protein [Brucella suis bv. 5 str. 513]
gi|261754108|ref|ZP_05997817.1| TolQ protein [Brucella suis bv. 3 str. 686]
gi|261757353|ref|ZP_06001062.1| TolQ protein [Brucella sp. F5/99]
gi|265987268|ref|ZP_06099825.1| TolQ protein [Brucella pinnipedialis M292/94/1]
gi|265991735|ref|ZP_06104292.1| TolQ protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265995572|ref|ZP_06108129.1| TolQ protein [Brucella melitensis bv. 3 str. Ether]
gi|265998783|ref|ZP_06111340.1| TolQ protein [Brucella ceti M490/95/1]
gi|294850951|ref|ZP_06791627.1| TolQ [Brucella sp. NVSL 07-0026]
gi|297248971|ref|ZP_06932679.1| TolQ protein [Brucella abortus bv. 5 str. B3196]
gi|13898973|gb|AAK48915.1|AF358662_2 TolQ protein [Brucella melitensis]
gi|17982232|gb|AAL51517.1| tolq protein [Brucella melitensis bv. 1 str. 16M]
gi|23348558|gb|AAN30600.1| tolQ protein [Brucella suis 1330]
gi|62196704|gb|AAX75004.1| TolQ, tolQ protein [Brucella abortus bv. 1 str. 9-941]
gi|82616589|emb|CAJ11668.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|161336440|gb|ABX62745.1| protein TolQ [Brucella canis ATCC 23365]
gi|163676002|gb|ABY40112.1| protein TolQ [Brucella suis ATCC 23445]
gi|189020362|gb|ACD73084.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225616114|gb|EEH13162.1| protein TolQ [Brucella ceti str. Cudo]
gi|225641520|gb|ACO01434.1| protein TolQ [Brucella melitensis ATCC 23457]
gi|237788740|gb|EEP62952.1| protein TolQ [Brucella abortus str. 2308 A]
gi|256000272|gb|ACU48671.1| biopolymer transport protein TolQ [Brucella microti CCM 4915]
gi|260151172|gb|EEW86267.1| TolQ protein [Brucella melitensis bv. 1 str. 16M]
gi|260154169|gb|EEW89251.1| TolQ protein [Brucella suis bv. 4 str. 40]
gi|260668939|gb|EEX55879.1| TolQ protein [Brucella abortus bv. 4 str. 292]
gi|260672879|gb|EEX59700.1| TolQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675507|gb|EEX62328.1| TolQ protein [Brucella abortus bv. 6 str. 870]
gi|260873943|gb|EEX81012.1| TolQ protein [Brucella abortus bv. 9 str. C68]
gi|260916277|gb|EEX83138.1| TolQ protein [Brucella abortus bv. 3 str. Tulya]
gi|260921408|gb|EEX88061.1| TolQ protein [Brucella ceti B1/94]
gi|260924378|gb|EEX90946.1| TolQ protein [Brucella ceti M13/05/1]
gi|261295040|gb|EEX98536.1| TolQ protein [Brucella ceti M644/93/1]
gi|261295428|gb|EEX98924.1| TolQ protein [Brucella pinnipedialis B2/94]
gi|261301721|gb|EEY05218.1| TolQ protein [Brucella neotomae 5K33]
gi|261304958|gb|EEY08455.1| biopolymer transporter TolQ [Brucella pinnipedialis M163/99/10]
gi|261737337|gb|EEY25333.1| TolQ protein [Brucella sp. F5/99]
gi|261740608|gb|EEY28534.1| TolQ protein [Brucella suis bv. 5 str. 513]
gi|261743861|gb|EEY31787.1| TolQ protein [Brucella suis bv. 3 str. 686]
gi|262553472|gb|EEZ09241.1| TolQ protein [Brucella ceti M490/95/1]
gi|262766856|gb|EEZ12474.1| TolQ protein [Brucella melitensis bv. 3 str. Ether]
gi|263002691|gb|EEZ15094.1| TolQ protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093352|gb|EEZ17421.1| TolQ protein [Brucella melitensis bv. 2 str. 63/9]
gi|264659465|gb|EEZ29726.1| TolQ protein [Brucella pinnipedialis M292/94/1]
gi|294821594|gb|EFG38590.1| TolQ [Brucella sp. NVSL 07-0026]
gi|297174104|gb|EFH33461.1| TolQ protein [Brucella abortus bv. 5 str. B3196]
gi|326409713|gb|ADZ66778.1| MotA/TolQ/ExbB proton channel [Brucella melitensis M28]
gi|326539420|gb|ADZ87635.1| protein TolQ [Brucella melitensis M5-90]
Length = 236
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + + ++ +G + P IG+ G ++GI+ + + + S
Sbjct: 112 QMRIDKAMDVALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLLAA 192
>gi|329122129|ref|ZP_08250737.1| MotA/TolQ/ExbB proton channel [Dialister micraerophilus DSM 19965]
gi|327466936|gb|EGF12452.1| MotA/TolQ/ExbB proton channel [Dialister micraerophilus DSM 19965]
Length = 202
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMG-------------ESLPAIGIV 178
+ G + I ++ EK+ AI +G P +G++
Sbjct: 65 LEKDGGIPAQIILEGINSTNRASSQEKIIEGAAIHAIGKLKEYITYLDVIVTLSPLMGLL 124
Query: 179 GAILGII---KAMGNLSQSPKILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKS 229
G ++G+I + +S P + + + +L T +G+ +L+Y+ +++
Sbjct: 125 GTVVGMIGSFNVLSVVSGQPFAVTSGVAEALVCTAIGLGVAIMALLAYTYLTARVNKLIL 184
Query: 230 TRLKQHRLYIIVKKA 244
K +Y+ + +
Sbjct: 185 DIEKISTVYLTMIEG 199
>gi|171320683|ref|ZP_02909699.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171094086|gb|EDT39179.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 243
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGISRMQAG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|28869675|ref|NP_792294.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|301386225|ref|ZP_07234643.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302060048|ref|ZP_07251589.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|302134430|ref|ZP_07260420.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28852917|gb|AAO55989.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 242
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 23/186 (12%)
Query: 46 VMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVL---------KLLYILMYNLKKGSRNE 96
++A+P + I+ + + LL IF G V K S +
Sbjct: 3 LLASPFESIEHAVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ 62
Query: 97 TENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE--IENLMDEEIDII 154
+ + D + + + +++ +E + ++I
Sbjct: 63 LAQEQPGAAARVALAGYAAIQ--------VPDGAQANDLSQSINHQDRLERALRQQIVRE 114
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTL 210
++ +G + P IG+ G + GI+ A+ + S S + + IG +L T
Sbjct: 115 RRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATG 174
Query: 211 LGIILS 216
+GI ++
Sbjct: 175 VGIAVA 180
>gi|86140668|ref|ZP_01059227.1| putative biopolymer transport protein [Leeuwenhoekiella blandensis
MED217]
gi|85832610|gb|EAQ51059.1| putative biopolymer transport protein [Leeuwenhoekiella blandensis
MED217]
Length = 234
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI--- 197
+I ++ + +Y K ++ + + P IG +G ++G++ A L+ S
Sbjct: 118 EDINTAIENSGRLEVYRLEKNVSVLATIAGAAPMIGFLGTVIGMVLAFHQLATSSGQAEM 177
Query: 198 --LGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 178 GNLAEGIYTAMTTTVAGLIVG 198
>gi|300718399|ref|YP_003743202.1| Biopolymer transport ExbB protein [Erwinia billingiae Eb661]
gi|299064235|emb|CAX61355.1| Biopolymer transport ExbB protein [Erwinia billingiae Eb661]
Length = 238
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 98 DDNGIKERTSFRLERRVAFFSRHAGRGNGFLATIGAIAPFVGLFGTVWGIMNSFIGIAQT 157
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 158 QTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|159043122|ref|YP_001531916.1| MotA/TolQ/ExbB proton channel [Dinoroseobacter shibae DFL 12]
gi|157910882|gb|ABV92315.1| MotA/TolQ/ExbB proton channel [Dinoroseobacter shibae DFL 12]
Length = 230
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLL 211
+ + + P IG++G +LG+I A L P L I +L T
Sbjct: 119 QSRAGLRVLELIATIAPLIGLLGTVLGMIAAFQALQDAGARADPGTLAGGIWEALLTTAA 178
Query: 212 GIILS 216
G+ ++
Sbjct: 179 GMAVA 183
>gi|186477201|ref|YP_001858671.1| protein TolQ [Burkholderia phymatum STM815]
gi|184193660|gb|ACC71625.1| protein TolQ [Burkholderia phymatum STM815]
Length = 225
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 45/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 92 EFLKGKEKRINDPGAILDGARRAMRAAFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ A L+ + + I +LT T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGLFAA 188
>gi|78065366|ref|YP_368135.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77966111|gb|ABB07491.1| Cell division and transport-associated protein TolQ [Burkholderia
sp. 383]
Length = 246
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 44/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 55 SWTFIFRKWFAIRRARVQTERFEKDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 112
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 113 EFLKAKEKRISDPGLVLDGARRAMRASFQREMDVLE-----------------ANLAFLA 155
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 156 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 209
>gi|292900653|ref|YP_003540022.1| biopolymer transport protein [Erwinia amylovora ATCC 49946]
gi|291200501|emb|CBJ47630.1| biopolymer transport protein [Erwinia amylovora ATCC 49946]
Length = 244
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ ++ I + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 103 DNNGIKERTAFRLERQVAAIGRHAGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQT 162
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 163 QTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|288962267|ref|YP_003452562.1| biopolymer transport protein [Azospirillum sp. B510]
gi|288914533|dbj|BAI76018.1| biopolymer transport protein [Azospirillum sp. B510]
Length = 386
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGT 200
+ ++ + ++ +G + P IG+ G + GI+ + +S+ + ++
Sbjct: 245 SRLERIEAAAGRRMARGTGILATIGSTGPFIGLFGTVWGIMTSFIGISRAQTTNLAVVAP 304
Query: 201 AIGVSLTGTLLGIILS 216
I +L T +G++ +
Sbjct: 305 GIAEALLATAIGLVAA 320
>gi|126667251|ref|ZP_01738224.1| Biopolymer transport protein [Marinobacter sp. ELB17]
gi|126628196|gb|EAZ98820.1| Biopolymer transport protein [Marinobacter sp. ELB17]
Length = 208
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISH-------MGESLPAIGIVGAILG 183
R++ G + +M + I +E + H + + P +G++G ++G
Sbjct: 72 RVLASGLLNAKHGREVM---KESIEHEASQVVHQLERFLNPLGTVATITPLLGLLGTVIG 128
Query: 184 IIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+IK + + L I +L T G+ ++
Sbjct: 129 MIKVFAEIQLAGVGNAGNLAGGISEALITTASGLSVA 165
>gi|49476144|ref|YP_034185.1| inner membrane tolQ protein [Bartonella henselae str. Houston-1]
gi|49238952|emb|CAF28250.1| inner membrane tolQ protein [Bartonella henselae str. Houston-1]
Length = 237
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIKAMGNL 191
G S +++ +D+ +D+IL + A ++ +G + P IG+ G ++GI+ + ++
Sbjct: 103 GIHTSISLQSRIDKAMDLILGRESAKIEAKLSFLATLGSAGPFIGLFGTVIGIMGSFLSI 162
Query: 192 SQSP----KILGTAIGVSLTGTLLGIILS 216
S S I+ I +L T +G+ +
Sbjct: 163 SASQNTSLAIVAPGIAEALLATAIGLFAA 191
>gi|86140775|ref|ZP_01059334.1| MotA/TolQ/ExbB proton channel family protein [Leeuwenhoekiella
blandensis MED217]
gi|85832717|gb|EAQ51166.1| MotA/TolQ/ExbB proton channel family protein [Leeuwenhoekiella
blandensis MED217]
Length = 263
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII 214
K +S P +G +G ++G+I+A + P ++ I V+L T+ G+I
Sbjct: 165 EKNVSWVSLFIALAPMLGFMGTVIGMIQAFDKIEAAGDMQPSLVAGGIKVALLTTVFGLI 224
Query: 215 LS 216
++
Sbjct: 225 VA 226
>gi|326561377|gb|EGE11733.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 46P47B1]
Length = 182
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E + ++I + YE K + P IG+ G + GI A+ ++ + + +
Sbjct: 72 EQKLLQQIALHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVA 131
Query: 204 V----SLTGTLLGIILSYS--LCNPLTSQIKSTR 231
+L T LG+ ++ + + ++I
Sbjct: 132 GPVGEALIMTGLGLAVAIPAVIFYNIATRINKQA 165
>gi|238755462|ref|ZP_04616802.1| TonB complex protein [Yersinia ruckeri ATCC 29473]
gi|238706303|gb|EEP98680.1| TonB complex protein [Yersinia ruckeri ATCC 29473]
Length = 339
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAI 202
++ + + + K ++ +G P +G+ G + GI+ + + + + ++ I
Sbjct: 210 LERRVAAVSRQMGKGTGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGI 269
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 270 AEALLATALGLVAA 283
>gi|149177142|ref|ZP_01855749.1| probable TolQ [Planctomyces maris DSM 8797]
gi|148844034|gb|EDL58390.1| probable TolQ [Planctomyces maris DSM 8797]
Length = 218
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 137 NARSYEIENLMDEEIDI-ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA------MG 189
+ ++ ++ E+ + IL + IS + +S P +G++G ++G+I A M
Sbjct: 94 ERPAKKLRQMLAEKFERDILADLEYRMSWISTIVKSAPMLGLLGTVIGMINAFDKIGNMQ 153
Query: 190 NLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
P L I +L T G+ ++ L + + R
Sbjct: 154 ESGGDPSQLAGEISFALFTTAAGLAVAIPLV--MAGALIHVR 193
>gi|315928677|gb|EFV07960.1| flagellar motor protein MotA domain protein [Campylobacter jejuni
subsp. jejuni 305]
Length = 61
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 20/51 (39%)
Query: 219 LCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSE 269
L P ++K+ + + I++ +A+ GA P+ L +
Sbjct: 2 LFAPWGKKLKANGMDLVKEQIVITEAIKGIAEGANPRDLEAKLFNFLSHDD 52
>gi|283479855|emb|CAY75771.1| Biopolymer transport exbB protein [Erwinia pyrifoliae DSM 12163]
Length = 337
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + I + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 196 DNNGIKERTAFRLERRVAAIGRHPGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQT 255
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 256 QTTNLAVVAPGIAEALLATAIGLVAA 281
>gi|260900757|ref|ZP_05909152.1| protein TolQ [Vibrio parahaemolyticus AQ4037]
gi|308110199|gb|EFO47739.1| protein TolQ [Vibrio parahaemolyticus AQ4037]
gi|328473196|gb|EGF44044.1| TolQ protein [Vibrio parahaemolyticus 10329]
Length = 232
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGLFAA 186
>gi|238750907|ref|ZP_04612404.1| TonB complex protein [Yersinia rohdei ATCC 43380]
gi|238710821|gb|EEQ03042.1| TonB complex protein [Yersinia rohdei ATCC 43380]
Length = 336
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 195 DNNGIKERAAFRLERRVAAISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 254
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 255 QTTNLAVVAPGIAEALLATALGLVAA 280
>gi|171057168|ref|YP_001789517.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170774613|gb|ACB32752.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 233
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-- 193
G ++ + + + +L + + ++ +G + P IG+ G + GI A+ +S
Sbjct: 95 GTHTQAQLTRRLRDALHGVLAQLQQGQVLLASVGATAPFIGLFGTVWGIYHALLGISAAG 154
Query: 194 --SPKILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRL-KQHRLYIIVKKA 244
S + +G +L T G+ +L+Y+L ++ H L ++ +
Sbjct: 155 SVSIDKVAGPVGEALIMTAAGLAVAIPAVLAYNLFGKWVGACEADLEGYAHDLREMLVE- 213
Query: 245 LIAYMNGAIPQ 255
G P+
Sbjct: 214 ----QAGLTPR 220
>gi|153948974|ref|YP_001399584.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis IP 31758]
gi|152960469|gb|ABS47930.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis IP 31758]
Length = 237
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 96 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 155
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 156 QTTNLAVVAPGIAEALLATALGLVAA 181
>gi|319943005|ref|ZP_08017288.1| TolQ colicin import protein [Lautropia mirabilis ATCC 51599]
gi|319743547|gb|EFV95951.1| TolQ colicin import protein [Lautropia mirabilis ATCC 51599]
Length = 230
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ G P IG+ G + GI+ A L+ + + I +L T +G+ +
Sbjct: 138 LASAGSVSPYIGLFGTVWGIMNAFRGLADVQQATLASVAPGIAEALVATAIGLFAA 193
>gi|255320525|ref|ZP_05361706.1| biopolymer transport protein [Acinetobacter radioresistens SK82]
gi|262378417|ref|ZP_06071574.1| biopolymer transporter [Acinetobacter radioresistens SH164]
gi|255302497|gb|EET81733.1| biopolymer transport protein [Acinetobacter radioresistens SK82]
gi|262299702|gb|EEY87614.1| biopolymer transporter [Acinetobacter radioresistens SH164]
Length = 210
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEK----LKPYHAISHMGESLPAIGIVGAILGIIK 186
++++ G A E E +++ ++ K + + + P IG++G +LGII+
Sbjct: 71 QILLTGYASRQESEQFARAQMEAKASQEIGYLEKNINFLGTLSAVAPLIGLLGTVLGIIE 130
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + +P ++ I +L T G++++
Sbjct: 131 SFLVIDLGTTSNPGLMIPGISKALITTAAGMLIA 164
>gi|229496787|ref|ZP_04390498.1| MotA/TolQ/ExbB proton channel family domain protein [Porphyromonas
endodontalis ATCC 35406]
gi|229316333|gb|EEN82255.1| MotA/TolQ/ExbB proton channel family domain protein [Porphyromonas
endodontalis ATCC 35406]
Length = 194
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-QSPKILGTAI 202
+L+ E D+ + +L ++ G P +G++G ++ + A+ LS + +
Sbjct: 93 RDLLIGEYDLAVEHRLGAAKILTKFG---PILGLMGTLIPMGPALVGLSSGDIASMAYNM 149
Query: 203 GVSLTGTLLGIILS 216
V+ T++G+ S
Sbjct: 150 QVAFATTVIGMFTS 163
>gi|172061160|ref|YP_001808812.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
gi|171993677|gb|ACB64596.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
Length = 243
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGISRMQAG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|154248193|ref|YP_001419151.1| TonB-system energizer ExbB type-1 [Xanthobacter autotrophicus Py2]
gi|154162278|gb|ABS69494.1| TonB-system energizer ExbB type-1 [Xanthobacter autotrophicus Py2]
Length = 327
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 11/111 (9%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLL 211
++ +G + P +G+ G + GI+ A +S+ + ++ I +L T L
Sbjct: 210 RRLSGGTGVLATIGATAPFVGLFGTVWGIMNAFIGISRAQTTNLAVVAPGIAEALLATAL 269
Query: 212 G-------IILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQ 255
G +++ + +Q + + + L +G P+
Sbjct: 270 GLVAAIPAVVIYNLFARAIAAQKARLADTSAEVMRHLSRDLDRAASGMEPR 320
>gi|119356687|ref|YP_911331.1| MotA/TolQ/ExbB proton channel [Chlorobium phaeobacteroides DSM 266]
gi|119354036|gb|ABL64907.1| Cell division and transport-associated protein TolQ [Chlorobium
phaeobacteroides DSM 266]
Length = 225
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 9/148 (6%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM--RMIIV 135
++ + + K SR + + IF ++ F Y+ R ++
Sbjct: 36 IIAFKFGYVNKSIKESREFLDCFFELSSVDKIFVESEKYRSSSLARVFRSAYIEYRALVE 95
Query: 136 GNARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
N + E + + E++ + ++ +G + P IG+ G + GI+ + +
Sbjct: 96 RNGERHVEERVARAVKREVNAESKRLVYLVPFLATVGNTAPFIGLFGTVWGIMTSFQQIG 155
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
S S + I +L T G++ +
Sbjct: 156 LTQSASLASVAPGISEALVATAAGLVAA 183
>gi|322379224|ref|ZP_08053615.1| Putative biopolymer transport protein exbB-like 1 [Helicobacter
suis HS1]
gi|321148364|gb|EFX42873.1| Putative biopolymer transport protein exbB-like 1 [Helicobacter
suis HS1]
Length = 183
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSPK--ILGTAIGVSLTGTLLGIIL---SYS 218
+S + + P +G+ G ++ I++ G+L ++ I +L T GI+ +YS
Sbjct: 94 VLSIIASTAPFVGLFGTVVEILETFGHLGGQVSFDVIAPTISKALVATAAGILTAIPAYS 153
Query: 219 LCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
+K + LIA
Sbjct: 154 FFL----ILKRKVYDLSVYVQMQIDMLIA 178
>gi|320016755|gb|ADW00327.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 345
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI----IKAMGN 190
N ++ + I + K ++ +G P +G+ G + GI I +
Sbjct: 204 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGITHS 263
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 264 QTTNLAVIAPGIAEALLATALGLVAA 289
>gi|116253712|ref|YP_769550.1| TolQ protein uptake system component [Rhizobium leguminosarum bv.
viciae 3841]
gi|115258360|emb|CAK09463.1| putative TolQ protein uptake system component [Rhizobium
leguminosarum bv. viciae 3841]
Length = 239
Score = 37.2 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 112 QMRIDRAMDVTLARETEFLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLVAA 192
>gi|134095581|ref|YP_001100656.1| inner membrane protein [Herminiimonas arsenicoxydans]
gi|133739484|emb|CAL62535.1| Protein TolQ [Herminiimonas arsenicoxydans]
Length = 230
Score = 37.2 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 62/203 (30%), Gaps = 32/203 (15%)
Query: 23 GNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY---CDVL 79
N +L+Q ++V + + I ++ + + D+
Sbjct: 14 ANASVLVQLVMALLVGVSVM-------SWTYIFRKMFAIKNARTQTEEFERAFWSGGDLN 66
Query: 80 KLLYILMYNLKK--GSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
L N +K GS E + + F + + D R
Sbjct: 67 ALYQDATSNRRKSSGSTGALERIFE--AGMSEFNK-SRASHDPSQASVRLDGAR------ 117
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---- 193
+ E+D + ++ +G P +G+ G + GI+ + L+
Sbjct: 118 ---RAMRAAYQREMDGLESHL----AFLASVGSVSPYVGLFGTVWGIMNSFRGLANVQQA 170
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+ + I +L T +G+ +
Sbjct: 171 TLAAVAPGIAEALIATAIGLFAA 193
>gi|332291240|ref|YP_004429849.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
gi|332169326|gb|AEE18581.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
Length = 234
Score = 37.2 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQSPKI 197
+I ++ + + +Y+ + ++ + + P IG +G ++G++ + S ++
Sbjct: 118 EDINTAIENQGKLEVYKLERNVSVLATIAGAAPMIGFLGTVIGMVLAFHTLATSSGQAEM 177
Query: 198 --LGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 178 GTLAEGIYTAMTTTVAGLIVG 198
>gi|22127369|ref|NP_670792.1| TonB complex protein [Yersinia pestis KIM 10]
gi|45442759|ref|NP_994298.1| TonB complex protein [Yersinia pestis biovar Microtus str. 91001]
gi|21960454|gb|AAM87043.1|AE013952_10 TonB complex protein [Yersinia pestis KIM 10]
gi|45437625|gb|AAS63175.1| TonB complex protein [Yersinia pestis biovar Microtus str. 91001]
Length = 353
Score = 37.2 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 212 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 271
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 272 QTTNLAVIAPGIAEALLATALGLVAA 297
>gi|326388394|ref|ZP_08209990.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
gi|326207126|gb|EGD57947.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
Length = 233
Score = 37.2 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 63/178 (35%), Gaps = 10/178 (5%)
Query: 49 NPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETEN-----HIDD 103
NP+++ + + + + G L ++ + M ++ R + ID
Sbjct: 18 NPVELFLHADIVVQIVMGGLVLASVWVWTIIVGFMVRMTLVRSRCRKYEDGFWSARDIDA 77
Query: 104 PYNSTIFTSIPTV-LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY 162
S IP+ + + L + I + M+ +
Sbjct: 78 YQKSHEDQDIPSARVVSAALAEWRRSTSGKSIDREGTRQRLSMAMESAVTQETDRLSNRL 137
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ ++ +G P +G+ G + G++ + N+ + S ++ I +L T +G+ +
Sbjct: 138 NFLATVGTVAPFVGLFGTVWGVMDSFFNIGAQQNSSLAVVAPGISEALFATAIGLFAA 195
>gi|163750976|ref|ZP_02158208.1| hypothetical protein KT99_07553 [Shewanella benthica KT99]
gi|161329266|gb|EDQ00264.1| hypothetical protein KT99_07553 [Shewanella benthica KT99]
Length = 173
Score = 37.2 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ + P +G++G + G+I + P ++ I +++ T G+ +
Sbjct: 87 QGVRLLAMVAPLLGLLGTVSGMIAMFDAGANYGFHDPAVISAGISMAMVTTQTGLFVG 144
>gi|299770411|ref|YP_003732437.1| biopolymer transport protein ExbB [Acinetobacter sp. DR1]
gi|298700499|gb|ADI91064.1| biopolymer transport protein ExbB [Acinetobacter sp. DR1]
Length = 211
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEVAASQEISYLEKNINFLGTLSAVAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 148 PGISKALITTAVGMLIA 164
>gi|241766457|ref|ZP_04764329.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241363354|gb|EER58874.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 239
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 52/180 (28%), Gaps = 18/180 (10%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
+ ++ L + L+I +K + +
Sbjct: 20 AVAILLLGMSLASWIVILIKALDIVKFKKHARAAQ-------DFWHSEDFAAGLTKLGAD 72
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
+P+ + + D + S + + ID
Sbjct: 73 PTNPFRHLALEGREATAHHRNTKAHLHDSL-------DVSDWVTRCLRNCIDEFTARIQS 125
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI A+ + + + IG +L T LG+ ++
Sbjct: 126 GLAILASVGSTAPFIGLFGTVWGIYHALLAIGTSGQSTIDKVAGPIGEALIMTALGLAVA 185
>gi|115525151|ref|YP_782062.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115519098|gb|ABJ07082.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 262
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + + ++ +G P +G+ G + GI+ A +S+ +
Sbjct: 135 ERVALRLERVEAAMARKIAIGTGVLASIGAVAPFVGLFGTVWGIMNAFIGISEAHSTNLA 194
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 195 VVAPGIAEALLATALGLVAA 214
>gi|108762277|ref|YP_632835.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108466157|gb|ABF91342.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 240
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 125 FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGI 184
F+ + RM A IE ++ E + + + ++ +G P +G+ G + GI
Sbjct: 79 FLAGFDRMERSRTAGGAGIEAAVERERAQVALKLRRYLWILATIGSITPFVGLFGTVAGI 138
Query: 185 IKAMGNLSQSPKILG--------TAIGVSLTGTLLGIILS 216
+++ +L + G T I +L T +GI+++
Sbjct: 139 MRSFKDLGLDVEAGGTGGSSAVMTGISEALVATAVGILVA 178
>gi|28897831|ref|NP_797436.1| TolQ protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260361762|ref|ZP_05774787.1| protein TolQ [Vibrio parahaemolyticus K5030]
gi|260876991|ref|ZP_05889346.1| protein TolQ [Vibrio parahaemolyticus AN-5034]
gi|260899062|ref|ZP_05907503.1| protein TolQ [Vibrio parahaemolyticus Peru-466]
gi|28806044|dbj|BAC59320.1| TolQ protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308089139|gb|EFO38834.1| protein TolQ [Vibrio parahaemolyticus Peru-466]
gi|308093873|gb|EFO43568.1| protein TolQ [Vibrio parahaemolyticus AN-5034]
gi|308113252|gb|EFO50792.1| protein TolQ [Vibrio parahaemolyticus K5030]
Length = 232
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGLFAA 186
>gi|313674448|ref|YP_004052444.1| outer membrane transport energization protein exbb [Marivirga
tractuosa DSM 4126]
gi|312941146|gb|ADR20336.1| outer membrane transport energization protein ExbB [Marivirga
tractuosa DSM 4126]
Length = 225
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKI 197
IE ++ + +Y K ++ + + P IG +G + G+I+A ++Q SPK+
Sbjct: 111 IEVSIENVGKVEIYRLEKNLSLLATISGAAPMIGFLGTVTGMIQAFIAIAQEEGSVSPKL 170
Query: 198 LGTAIGVSLTGTLLGI---ILSYS 218
L I ++ T +G+ I++Y
Sbjct: 171 LSEGIYEAMITTAVGLSVGIIAYL 194
>gi|167625523|ref|YP_001675817.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167355545|gb|ABZ78158.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 172
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Query: 128 DYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
DY + ++V + + L + I ++ + + P +G++G + G+I
Sbjct: 52 DYSKAMLVTTRHDWLNQRLSLLALRQIQAQQYADLQGVKLLAMVAPLLGLLGTVSGMIAM 111
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ P ++ I +++ T G+ +
Sbjct: 112 FDAGASYGFHDPAVISAGISMAMVTTQTGLFVG 144
>gi|241206188|ref|YP_002977284.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860078|gb|ACS57745.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 239
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + +++ +G + P IG+ G ++GI+ + + S +
Sbjct: 112 QMRIDRAMDVTLARETEFLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLVAA 192
>gi|50083746|ref|YP_045256.1| putative biopolymer transport protein (ExbB) [Acinetobacter sp.
ADP1]
gi|49529722|emb|CAG67434.1| putative biopolymer transport protein (ExbB) [Acinetobacter sp.
ADP1]
Length = 207
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 10/107 (9%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E + +I K + + P +G+ G + GI A+ + +S + +
Sbjct: 74 EQALLRQISAEKSNAEKGVAVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVA 133
Query: 204 V----SLTGTLLGI------ILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L T LG+ +L+Y++C + Q +I
Sbjct: 134 TPVGEALIMTGLGLAVAIPAVLAYNICVRFNRGLAHDLQDQAHSLLI 180
>gi|27365497|ref|NP_761025.1| protein TolQ [Vibrio vulnificus CMCP6]
gi|37680462|ref|NP_935071.1| tol biopolymer transport system, TolQ protein [Vibrio vulnificus
YJ016]
gi|320155879|ref|YP_004188258.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
gi|27361645|gb|AAO10552.1| protein TolQ [Vibrio vulnificus CMCP6]
gi|37199210|dbj|BAC95042.1| tol biopolymer transport system, TolQ protein [Vibrio vulnificus
YJ016]
gi|319931191|gb|ADV86055.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
Length = 227
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E ++ +G P IG+ G + GI+ A L + + ++ I
Sbjct: 113 MRVAVSREVDELETSLPFLATVGSITPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAMGLFAA 186
>gi|294507700|ref|YP_003571758.1| MotA/TolQ/ExbB proton channel [Salinibacter ruber M8]
gi|294344028|emb|CBH24806.1| MotA/TolQ/ExbB proton channel [Salinibacter ruber M8]
Length = 248
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 172 LPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS---YSLCNPLT 224
P +G +G ++G+I+A ++ Q SP+++ I ++L T G+I++ N
Sbjct: 144 APMLGFLGTVIGMIEAFDSIEQAGDISPRLVAGGIKIALLTTAFGLIVAVILQFFYNYAV 203
Query: 225 SQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
S+I + I + AL+A G
Sbjct: 204 SKIDRLVAEMEDASIELVDALVALERGES 232
>gi|304320245|ref|YP_003853888.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Parvularcula bermudensis HTCC2503]
gi|303299147|gb|ADM08746.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Parvularcula bermudensis HTCC2503]
Length = 231
Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E++ ++ L + ++ +G + P IG+ G + GI+ A + + +
Sbjct: 113 RLESVARVHVNRELEKIQSQLSVLATIGSAAPFIGLFGTVWGIMNAFRGIGATGDANLAV 172
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T LG++ +
Sbjct: 173 VAPGIAEALFATALGLVAA 191
>gi|292486957|ref|YP_003529827.1| biopolymer transport exbb protein [Erwinia amylovora CFBP1430]
gi|291552374|emb|CBA19419.1| Biopolymer transport exbB protein [Erwinia amylovora CFBP1430]
Length = 239
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ ++ I + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 98 DNNGIKERTAFRLERQVAAIGRHAGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQT 157
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 158 QTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|118594341|ref|ZP_01551688.1| MotA/TolQ/ExbB proton channel [Methylophilales bacterium HTCC2181]
gi|118440119|gb|EAV46746.1| MotA/TolQ/ExbB proton channel [Methylophilales bacterium HTCC2181]
Length = 223
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 15/121 (12%)
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH------- 163
+V N+ + + R E + + I+ + Y+
Sbjct: 67 KLYESVSNNSRGINGLAEIFRSGYKEYMGQKEHQAFDKKSIESVRRAMRASYNREIDTLD 126
Query: 164 ----AISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIIL 215
++ +G P IG+ G + GI+ A LS + I +L T +G+
Sbjct: 127 QHLPFLASVGSVSPYIGLFGTVWGIMNAFIGLSNVAQATLSQVAPGIAEALIATAIGLFA 186
Query: 216 S 216
+
Sbjct: 187 A 187
>gi|104784186|ref|YP_610684.1| biopolymer transport protein ExbB [Pseudomonas entomophila L48]
gi|95113173|emb|CAK17901.1| putative biopolymer transport protein ExbB [Pseudomonas entomophila
L48]
Length = 240
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 102 RLERALRQQIVRERRSLETGLAVVASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 161
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 162 VAGPIGAALVATGVGIAVA 180
>gi|37222145|gb|AAP49338.1| ExbB [uncultured bacterium]
Length = 238
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
+ ID + ++ +G + P +G+ G + GI A+ + S + +
Sbjct: 112 LRGSIDESAERLQRGLAILASVGSTAPFVGLFGTVWGIYHALVGIGISGQASIDKVAGPV 171
Query: 203 GVSLTGTLLGIILS 216
G +L T G+ ++
Sbjct: 172 GEALIMTAFGLAVA 185
>gi|254490479|ref|ZP_05103665.1| hypothetical protein MDMS009_811 [Methylophaga thiooxidans DMS010]
gi|224464223|gb|EEF80486.1| hypothetical protein MDMS009_811 [Methylophaga thiooxydans DMS010]
Length = 599
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 174 AIGIVGAILGIIKAM-----GNLSQSPKILGTAIGVSLTGTLLGIILSYSL-CNPLTSQI 227
+GI G +GI+ + N+ S + L + + +LLGII S + I
Sbjct: 55 TLGIFGTFVGIVIGLLEFDASNIDDSIEGLLAGLKTAFLTSLLGIITSILFKIIQTSGLI 114
Query: 228 KSTRLKQHRLYIIVKKALIAY 248
+ ++ ++ ++ L +
Sbjct: 115 SARVSEEQQISASPEEILTSI 135
>gi|56476435|ref|YP_158024.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
gi|56312478|emb|CAI07123.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
Length = 259
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP-- 195
+ M + I + + ++ +G + P +G+ G + GI A+ +S S
Sbjct: 107 DADEFVTRAMRKSIALSTAQLESGLTVLASIGSTAPFVGLFGTVWGIYHALIGISTSGMA 166
Query: 196 --KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLK 233
+ +G +L T G+ ++ + ++ RL+
Sbjct: 167 TLDKVAGPVGEALIMTAFGLFVAIPAVLAFNTFTRANRLE 206
>gi|114319407|ref|YP_741090.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114225801|gb|ABI55600.1| Cell division and transport-associated protein TolQ
[Alkalilimnicola ehrlichii MLHE-1]
Length = 235
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + + + ++ +G P +G+ G + GI+ + L + + + I
Sbjct: 113 MRVSLSREMDDLERHLPFLATVGSVSPYVGLFGTVWGIMNSFRALGEMQQATLATVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T LG+ +
Sbjct: 173 AEALIATALGLFAA 186
>gi|258542444|ref|YP_003187877.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256633522|dbj|BAH99497.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256636581|dbj|BAI02550.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256639634|dbj|BAI05596.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256642690|dbj|BAI08645.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256645745|dbj|BAI11693.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256648798|dbj|BAI14739.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256651851|dbj|BAI17785.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654842|dbj|BAI20769.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 249
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAI 202
++ ++ ++ +G + P IG+ G + GI+ + ++ S ++ I
Sbjct: 112 LERLEAAEGRRLMRGTGVLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGI 171
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 172 AEALLATALGLVAA 185
>gi|237738480|ref|ZP_04568961.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
gi|229420360|gb|EEO35407.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
Length = 203
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 137 NARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS- 192
N + IE L ++ + + E K IS + P +G++G + G+IKA +S
Sbjct: 83 NNPNSSIEKLEEKGKERAMAEIAGLEKNMWIISLVAHLTPFVGLLGTVTGMIKAFQAVSI 142
Query: 193 ---QSPKILGTAIGVSLTGTLLGIILS 216
+L I +L T G+ ++
Sbjct: 143 YGTGDASVLAKGISEALFTTAGGLFVA 169
>gi|225154950|ref|ZP_03723447.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224804309|gb|EEG22535.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 622
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 23/215 (10%), Positives = 71/215 (33%), Gaps = 32/215 (14%)
Query: 6 GLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIF 65
G +CII +I+ G + + K+ K S + +
Sbjct: 383 GWIAVFVCII-------------------MIIVGWSVAIAKFSYLNKIQKGSESFIKQW- 422
Query: 66 GYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTF 125
++ D+ L + +++ + S + + + E+
Sbjct: 423 ------KEVSSDLTALDHNNAESVQSLGGTASAATQKLIRQSPHYHVYQ--IGSEEIRHR 474
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ + I+ +D + + ++ P +G++G ++G++
Sbjct: 475 LTRKGGFAGLSARSIQAIKASLDSGLTHETDRLNRGLVYLTISIAGGPYVGLLGTVVGVM 534
Query: 186 KAMGNLSQSPKI----LGTAIGVSLTGTLLGIILS 216
++++ ++ + I +L T+ G++++
Sbjct: 535 ITFAVIAKTGEVEVNSIAPGIASALLATVAGLLVA 569
>gi|187922767|ref|YP_001894409.1| protein TolQ [Burkholderia phytofirmans PsJN]
gi|187713961|gb|ACD15185.1| protein TolQ [Burkholderia phytofirmans PsJN]
Length = 225
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 46/174 (26%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + ++ + MR E ++
Sbjct: 92 EFLKGKEKRLNDSGAILDGARRAMRAAFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ A L+ + + I +LT T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGLFAA 188
>gi|93006076|ref|YP_580513.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
gi|92393754|gb|ABE75029.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
Length = 213
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E ++ ++I Y+ + + P IG+ G + GI A+ ++ S + +
Sbjct: 74 EQMLLQQIGRYRYQSEQGLPLLGTTAAIAPFIGLFGTVWGIFHALRSIGDSGQAGLAQVA 133
Query: 204 V----SLTGTLLGIILS 216
+L T LG+ ++
Sbjct: 134 GPVGEALIMTGLGLAVA 150
>gi|262278905|ref|ZP_06056690.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
calcoaceticus RUH2202]
gi|262259256|gb|EEY77989.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
calcoaceticus RUH2202]
Length = 211
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEVAASQEISYLEKNINFLGTISAVAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 148 PGISKALITTAVGMLIA 164
>gi|192358852|ref|YP_001983769.1| adventurous gliding motility protein R [Cellvibrio japonicus
Ueda107]
gi|190685017|gb|ACE82695.1| adventurous gliding motility protein R [Cellvibrio japonicus
Ueda107]
Length = 231
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPK 196
+IE M+E + + K ++ + +G++G I+G+I A + ++
Sbjct: 97 DIELAMEEGVMEAMPRLEKRTAYLATLANISTLLGLLGTIIGLIAAFTAVANADPAEKAA 156
Query: 197 ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKK---ALIAYMNGAI 253
+L ++I V++ T G+I + L + S ++S + + +IA++
Sbjct: 157 LLSSSIAVAMNTTAFGLISAIPLLL-IHSMLQSKTTEIIDSLEMAGVKCLNIIAHVQEVT 215
Query: 254 PQ 255
P+
Sbjct: 216 PR 217
>gi|115350734|ref|YP_772573.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|115280722|gb|ABI86239.1| Cell division and transport-associated protein TolQ [Burkholderia
ambifaria AMMD]
Length = 242
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 44/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 51 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 108
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 109 EFLKAKEKRLTDPGLVLDGARRAMRASFQREMDVLE-----------------ANLAFLA 151
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 152 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 205
>gi|49082190|gb|AAT50495.1| PA0198 [synthetic construct]
Length = 240
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 101 RLERALRQQIQRERRSLGSGLAVLASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 160
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 161 VAGPIGSALIATGVGIAVA 179
>gi|326565865|gb|EGE16027.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis BC1]
Length = 182
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E + ++I + YE K + P IG+ G + GI A+ ++ + + +
Sbjct: 72 EQKLLQQIALHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVA 131
Query: 204 V----SLTGTLLGIILSYS--LCNPLTSQIKSTR 231
+L T LG+ ++ + + ++I
Sbjct: 132 GPVGEALIMTGLGLAVAIPAVIFYNIATRINKQA 165
>gi|170719483|ref|YP_001747171.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
gi|169757486|gb|ACA70802.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
Length = 239
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 101 RLERALHQQIVRERRSLETGLAVVASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 160
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 161 VAGPIGAALVATGVGIAVA 179
>gi|162419125|ref|YP_001604886.1| tonB-system energizer ExbB [Yersinia pestis Angola]
gi|162351940|gb|ABX85888.1| tonB-system energizer ExbB [Yersinia pestis Angola]
Length = 330
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 189 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 248
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 249 QTTNLAVIAPGIAEALLATALGLVAA 274
>gi|27366803|ref|NP_762330.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus CMCP6]
gi|320158686|ref|YP_004191064.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio vulnificus MO6-24/O]
gi|27358370|gb|AAO07320.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus CMCP6]
gi|319933998|gb|ADV88861.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio vulnificus MO6-24/O]
Length = 185
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSL 206
+D + K I + P +G++G + G+I + S +PK++ + I ++
Sbjct: 87 LDDAHQQLFKHLAFIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSNPKLMASGISLAT 146
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
T+ G++ + +K + ++ +L ++
Sbjct: 147 LPTMAGMVAALVGMFVHARLVKLCQNREVKLEQSLR 182
>gi|165924876|ref|ZP_02220708.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|167398853|ref|ZP_02304377.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|165923076|gb|EDR40227.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|167051357|gb|EDR62765.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
UG05-0454]
Length = 332
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 191 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 250
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 251 QTTNLAVIAPGIAEALLATALGLVAA 276
>gi|260424620|ref|ZP_05732695.2| MotA/TolQ/ExbB proton channel family protein [Dialister invisus DSM
15470]
gi|260402576|gb|EEW96123.1| MotA/TolQ/ExbB proton channel family protein [Dialister invisus DSM
15470]
Length = 208
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Query: 172 LPAIGIVGAILGIIK---AMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIK 228
P +G++G ++G+I + P + + +L T G+ ++ + + +
Sbjct: 124 SPLMGLLGTVIGMIGSFDVLSTADGQPFAITGGVAEALVCTATGLFVA-IIALIAYTYLS 182
Query: 229 STRLKQHRLYIIVKKALIAYMNGA 252
+ +A G
Sbjct: 183 QQVSHYISSIEKLSSVYLAIAEGK 206
>gi|260547184|ref|ZP_05822922.1| TolQ protein [Brucella abortus NCTC 8038]
gi|260095549|gb|EEW79427.1| TolQ protein [Brucella abortus NCTC 8038]
Length = 228
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
I+ MD + + ++ +G + P IG+ G ++GI+ + + + S
Sbjct: 112 QMRIDKAMDVALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSL 171
Query: 196 KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 172 AVVAPGIAEALLATAIGLLAA 192
>gi|258650297|ref|YP_003199453.1| glycogen/starch/alpha-glucan phosphorylase [Nakamurella
multipartita DSM 44233]
gi|258553522|gb|ACV76464.1| glycogen/starch/alpha-glucan phosphorylase [Nakamurella
multipartita DSM 44233]
Length = 814
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 16/154 (10%)
Query: 92 GSRNETENHIDDPYNSTIF--------TSIPTVLENNELTTFICDYMRMIIVGNARSYEI 143
G E E H DDP F + +LE + D M ++V Y+
Sbjct: 497 GRLVELEPHADDPAFLDAFAAIKVGNRKRLAGLLERRDGIVLPQDAMYDVMVKRLHEYKR 556
Query: 144 ENLMDEEIDIILYEKLKPY------HAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI 197
+ L I + + ++ P I + +I A+G + + I
Sbjct: 557 QTLKLLHIVTLYQRLQENPDLDIVPRVFLFGAKAAPGYWIAKQTIALINAVGRVIDNDPI 616
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
+ + V+ + L+ +L P +
Sbjct: 617 VAGRLKVAFPAN-YNVTLAETLI-PAADLSEQIS 648
>gi|152981708|ref|YP_001351935.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
gi|151281785|gb|ABR90195.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
Length = 279
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
+ +D + ++ +G + P +G+ G + GI A+ + S + +
Sbjct: 165 LHSSVDTVKNRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGLSGQASIDKVAGPV 224
Query: 203 GVSLTGTLLGIILS 216
G +L T +G+ ++
Sbjct: 225 GEALIMTAIGLAVA 238
>gi|15596166|ref|NP_249660.1| TolQ protein [Pseudomonas aeruginosa PAO1]
gi|107100425|ref|ZP_01364343.1| hypothetical protein PaerPA_01001450 [Pseudomonas aeruginosa PACS2]
gi|116048894|ref|YP_792305.1| TolQ protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|152986028|ref|YP_001349888.1| TolQ protein [Pseudomonas aeruginosa PA7]
gi|218893060|ref|YP_002441929.1| TolQ protein [Pseudomonas aeruginosa LESB58]
gi|254245252|ref|ZP_04938574.1| TolQ protein [Pseudomonas aeruginosa 2192]
gi|296390672|ref|ZP_06880147.1| TolQ protein [Pseudomonas aeruginosa PAb1]
gi|313105856|ref|ZP_07792119.1| TolQ protein [Pseudomonas aeruginosa 39016]
gi|1729993|sp|P50598|TOLQ_PSEAE RecName: Full=Protein tolQ
gi|9946876|gb|AAG04358.1|AE004530_11 TolQ protein [Pseudomonas aeruginosa PAO1]
gi|1103860|gb|AAC44658.1| TolQ [Pseudomonas aeruginosa]
gi|115584115|gb|ABJ10130.1| TolQ protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198630|gb|EAZ62693.1| TolQ protein [Pseudomonas aeruginosa 2192]
gi|150961186|gb|ABR83211.1| protein TolQ [Pseudomonas aeruginosa PA7]
gi|218773288|emb|CAW29100.1| TolQ protein [Pseudomonas aeruginosa LESB58]
gi|310878621|gb|EFQ37215.1| TolQ protein [Pseudomonas aeruginosa 39016]
Length = 231
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M I + ++ +G + P +G+ G + GI+ + L+ + + I
Sbjct: 117 MRVAISREEEKLEASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLATVQQATLATVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALIATAIGLFAA 190
>gi|196233275|ref|ZP_03132121.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196222746|gb|EDY17270.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 254
Score = 37.2 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
R+ I ++ + M+ + ++ P +G++G + G++
Sbjct: 115 RLDIAQRISPAQMRVVTTAMERAVGETALRLESQMILLATAVSGAPFLGLLGTVWGVMDT 174
Query: 188 MGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
G++ S + + + +L T+ G++++
Sbjct: 175 FGDVAAAGSANLAAMAPGVSAALITTVTGLLVA 207
>gi|312958329|ref|ZP_07772850.1| TonB system transport protein [Pseudomonas fluorescens WH6]
gi|311287393|gb|EFQ65953.1| TonB system transport protein [Pseudomonas fluorescens WH6]
Length = 239
Score = 37.2 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 101 RLERALRQQIVRERRSLETGLAVVASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 160
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 161 VAGPIGAALVATGVGIAVA 179
>gi|53803730|ref|YP_114656.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53757491|gb|AAU91782.1| MotA/TolQ/ExbB proton channel family domain protein [Methylococcus
capsulatus str. Bath]
Length = 607
Score = 37.2 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ P +G++G ++G++ + + + I +L T+ G+ ++
Sbjct: 507 LTIAIAGGPFLGLLGTVVGVMITFAVIAATGDVNINSIAPGIAAALLATVAGLAVA 562
>gi|148262289|ref|YP_001228995.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146395789|gb|ABQ24422.1| Cell division and transport-associated protein TolQ [Geobacter
uraniireducens Rf4]
Length = 224
Score = 37.2 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KIL 198
I + + K ++ G + P IG+ G + GI+ A + ++ ++
Sbjct: 108 ISRALRRATTSEITRLEKYLTFLATTGSTAPFIGLFGTVWGIMTAFKGIGETGSASLAVV 167
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G++ +
Sbjct: 168 APGIAEALIATAIGLVAA 185
>gi|49081978|gb|AAT50389.1| PA0969 [synthetic construct]
Length = 232
Score = 37.2 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M I + ++ +G + P +G+ G + GI+ + L+ + + I
Sbjct: 117 MRVAISREEEKLEASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLATVQQATLATVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALIATAIGLFAA 190
>gi|108809101|ref|YP_653017.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Antiqua]
gi|108810704|ref|YP_646471.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Nepal516]
gi|150260288|ref|ZP_01917016.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
CA88-4125]
gi|165939887|ref|ZP_02228426.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008741|ref|ZP_02229639.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212089|ref|ZP_02238124.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167419105|ref|ZP_02310858.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425209|ref|ZP_02316962.1| tonB-system energizer ExbB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167466386|ref|ZP_02331090.1| TonB complex protein [Yersinia pestis FV-1]
gi|229837364|ref|ZP_04457527.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Pestoides A]
gi|229840576|ref|ZP_04460735.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229842874|ref|ZP_04463026.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229900902|ref|ZP_04516026.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Nepal516]
gi|270487724|ref|ZP_06204798.1| TonB-system energizer ExbB [Yersinia pestis KIM D27]
gi|108774352|gb|ABG16871.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Nepal516]
gi|108781014|gb|ABG15072.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Antiqua]
gi|149289696|gb|EDM39773.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
CA88-4125]
gi|165912198|gb|EDR30836.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
IP275]
gi|165992080|gb|EDR44381.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206835|gb|EDR51315.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963099|gb|EDR59120.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167055972|gb|EDR65753.1| tonB-system energizer ExbB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229682241|gb|EEO78333.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Nepal516]
gi|229690141|gb|EEO82198.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229696942|gb|EEO86989.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229705487|gb|EEO91497.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Pestoides A]
gi|262360780|gb|ACY57501.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
D106004]
gi|262364725|gb|ACY61282.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
D182038]
gi|270336228|gb|EFA47005.1| TonB-system energizer ExbB [Yersinia pestis KIM D27]
Length = 345
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 204 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 263
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 264 QTTNLAVIAPGIAEALLATALGLVAA 289
>gi|83814961|ref|YP_445800.1| MotA/TolQ/ExbB proton channel family protein [Salinibacter ruber
DSM 13855]
gi|83756355|gb|ABC44468.1| MotA/TolQ/ExbB proton channel family protein [Salinibacter ruber
DSM 13855]
Length = 242
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 172 LPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS---YSLCNPLT 224
P +G +G ++G+I+A ++ Q SP+++ I ++L T G+I++ N
Sbjct: 138 APMLGFLGTVIGMIEAFDSIEQAGDISPRLVAGGIKIALLTTAFGLIVAVILQFFYNYAV 197
Query: 225 SQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
S+I + I + AL+A G
Sbjct: 198 SKIDRLVAEMEDASIELVDALVALERGES 226
>gi|75674900|ref|YP_317321.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74419770|gb|ABA03969.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 400
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEK----LKPYHAISHMGESLPAIGIVGAILGIIKA 187
+ G+ S I+ + + I + + ++ +G + P +G+ G + GI+ A
Sbjct: 250 LQRSGDLSSEGIKERLAIALSRIEAKAGRDIARGTGLLATIGATAPFVGLFGTVWGIMNA 309
Query: 188 MGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+SQ + ++ I +L T LG++ +
Sbjct: 310 FIGISQTKTTNLAVVAPGIAEALLATALGLVAA 342
>gi|70733732|ref|YP_257372.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
gi|68348031|gb|AAY95637.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
Length = 241
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 102 RLERALRQQIVRERRSLETGLAVVASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 161
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 162 VAGPIGAALVATGVGIAVA 180
>gi|77461776|ref|YP_351283.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77385779|gb|ABA77292.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 317
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 17/178 (9%), Positives = 57/178 (32%), Gaps = 15/178 (8%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN 137
+ K ++ + ++ + L N + + + MR+
Sbjct: 120 IAKGFELMGAKRRLRGEIAALKKAATLKEASATAAKEGTLANLLVHDALEE-MRLSTNAR 178
Query: 138 ARS---YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
+ + ++ + ++ +G + P +G+ G + GI+ + +++
Sbjct: 179 EKEGIKERVSFRLERLVAACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKT 238
Query: 194 ---SPKILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
+ ++ I +L T LG +++ + ++ ++V
Sbjct: 239 QTTNLAVVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 296
>gi|148550415|ref|YP_001270517.1| TonB-system energizer ExbB type-1 [Pseudomonas putida F1]
gi|148514473|gb|ABQ81333.1| TonB-system energizer ExbB type-1 [Pseudomonas putida F1]
Length = 324
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 57/169 (33%), Gaps = 19/169 (11%)
Query: 92 GSRNETENHIDDPYNSTIFTSIPTVL--ENNELTTFICDYMRMI--IVGNARSYEIENLM 147
G++ I ST V E T + D + + I+ +
Sbjct: 136 GAKRRLRGEIAQLKKSTTLKEASEVSNKEGTLAHTLVHDALEEMRLSTNAREKEGIKERV 195
Query: 148 DEEIDIILYE----KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILG 199
++ +++ ++ +G + P +G+ G + GI+ + +++ + ++
Sbjct: 196 SFRLERLVHASGRTMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVA 255
Query: 200 TAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
I +L T LG +++ + ++ ++V
Sbjct: 256 PGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 304
>gi|294502748|ref|YP_003566810.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Z176003]
gi|294353207|gb|ADE63548.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Z176003]
Length = 343
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 202 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 261
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 262 QTTNLAVIAPGIAEALLATALGLVAA 287
>gi|167586276|ref|ZP_02378664.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 225
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 44/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 92 EFLKAKEKRISDPGLVLDGARRAMRASFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|317060725|ref|ZP_07925210.1| LOW QUALITY PROTEIN: biopolymer transport exbB protein
[Fusobacterium sp. D12]
gi|313686401|gb|EFS23236.1| LOW QUALITY PROTEIN: biopolymer transport exbB protein
[Fusobacterium sp. D12]
Length = 215
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 143 IENLMDEEIDIILY---EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+E L ++ ++ + + IS P +G++G + G+IKA + + P
Sbjct: 101 LEALEEKGKEVAIQQLRHLERNMWLISVAAHVAPLVGLLGTVTGMIKAFQAVALYGTGDP 160
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+L I +L T G+ ++
Sbjct: 161 AVLAKGISEALYTTAGGLFVA 181
>gi|297182080|gb|ADI18253.1| biopolymer transport proteins [uncultured Chromatiales bacterium
HF0200_41F04]
Length = 222
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM------GNLS 192
+ E+ + LY K + + P +G++G +LG+I A +
Sbjct: 100 DTEELREELARRATNFLYPYGKYMRPLELIYYLAPVLGLLGTVLGMIDAFRGLESSAGMD 159
Query: 193 QSPKILGTAIGVSLTGTLLGIILSYSL 219
+ L I +L T +G+ ++
Sbjct: 160 KDSTALAGGIWEALLTTAVGLSIAIPF 186
>gi|289675557|ref|ZP_06496447.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
Length = 84
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+E + ++I ++ +G + P IG+ G + GII A+ +SQ
Sbjct: 30 LERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALSAISQ 80
>gi|257463129|ref|ZP_05627530.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
Length = 203
Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 143 IENLMDEEIDIILY---EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+E L ++ ++ + + IS P +G++G + G+IKA + + P
Sbjct: 89 LEALEEKGKEVAIQQLRHLERNMWLISVAAHVAPLVGLLGTVTGMIKAFQAVALYGTGDP 148
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+L I +L T G+ ++
Sbjct: 149 AVLAKGISEALYTTAGGLFVA 169
>gi|254239317|ref|ZP_04932640.1| TolQ protein [Pseudomonas aeruginosa C3719]
gi|126171248|gb|EAZ56759.1| TolQ protein [Pseudomonas aeruginosa C3719]
Length = 231
Score = 37.2 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
M I + ++ +G + P +G+ G + GI+ + L+ + + I
Sbjct: 117 MRVAISREEEKLEASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLATVQQATLATVAPGI 176
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 177 AEALIATAIGLFAA 190
>gi|255593120|ref|XP_002535793.1| Biopolymer transport exbB protein, putative [Ricinus communis]
gi|223521926|gb|EEF26588.1| Biopolymer transport exbB protein, putative [Ricinus communis]
Length = 294
Score = 37.2 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 61/181 (33%), Gaps = 11/181 (6%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYC-DVLKLLYILMYNLKKGSRNETEN 99
GLG V K + + L+ + + T + +L+ +
Sbjct: 74 GLGALWAQGDF-VAKGTLIILVIMSAFTWYIMVTKLWEQQRLISQAGAARRAWDAKSLGE 132
Query: 100 HIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKL 159
I + ++ V E+ D + A + + + +D I
Sbjct: 133 GIQKLAKN---SAYRAVAEDGLRAREHHDGK--LTDNIALPEWVTSNVQRSVDGINSRMQ 187
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIIL 215
++ +G + P +G+ G + GI A+ + S + +G +L T +G+ +
Sbjct: 188 GGLAFLATVGSTAPFVGLFGTVWGIYHALIAIGLAGQASIDKVAGPVGEALIMTAIGLAV 247
Query: 216 S 216
+
Sbjct: 248 A 248
>gi|296161441|ref|ZP_06844247.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295888256|gb|EFG68068.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 262
Score = 37.2 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
I + + +D + ++ +G + P +G+ G + GI A+ + + S +
Sbjct: 113 ITRRLQDTMDDAIARMQSGLAVLASIGSTAPFVGLFGTVWGIYHALILIGETGQTSIDHV 172
Query: 199 GTAIGVSLTGTLLGIILS 216
+G SL T G+ ++
Sbjct: 173 AGPVGESLIMTAFGLFVA 190
>gi|59711565|ref|YP_204341.1| membrane spanning protein in TolA-TolQ-TolR complex [Vibrio
fischeri ES114]
gi|197334878|ref|YP_002155720.1| protein TolQ [Vibrio fischeri MJ11]
gi|59479666|gb|AAW85453.1| membrane spanning protein in TolA-TolQ-TolR complex [Vibrio
fischeri ES114]
gi|197316368|gb|ACH65815.1| protein TolQ [Vibrio fischeri MJ11]
Length = 228
Score = 37.2 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLC 220
++ +G P IG+ G + GI+ A L + ++ I +L T +G+ +
Sbjct: 131 LATVGSITPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGLFAAIPAV 190
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+++ K Y + ++
Sbjct: 191 I-AYNRLSVKVGKLEHNYAAFMDEFSSILHRQA 222
>gi|308188108|ref|YP_003932239.1| Biopolymer transport exbB protein [Pantoea vagans C9-1]
gi|308058618|gb|ADO10790.1| Biopolymer transport exbB protein [Pantoea vagans C9-1]
Length = 240
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + ++ +G P IG+ G + GI+ + +++ + ++ I
Sbjct: 110 LERRVAAFSRHAGRGNGFLATIGSVAPFIGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGI 169
Query: 203 GVSLTGTLLGIILS 216
+L T +G++ +
Sbjct: 170 AEALLATAIGLVAA 183
>gi|258543290|ref|YP_003188723.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256634368|dbj|BAI00344.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256637426|dbj|BAI03395.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256640478|dbj|BAI06440.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256643535|dbj|BAI09490.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256646590|dbj|BAI12538.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256649643|dbj|BAI15584.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256652631|dbj|BAI18565.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655687|dbj|BAI21614.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 258
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAI 202
++ ++ ++ +G + P IG+ G + GI+ + ++ S ++ I
Sbjct: 126 LERLEAAEGRRLMRGTGLLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGI 185
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 186 AEALLATALGLVAA 199
>gi|91777657|ref|YP_552865.1| bipolymer transport protein MotA/TolQ/ExbB family [Burkholderia
xenovorans LB400]
gi|91690317|gb|ABE33515.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 262
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
I + + +D + ++ +G + P +G+ G + GI A+ + + S +
Sbjct: 113 ITRRLQDTMDDAIARMQSGLAVLASIGSTAPFVGLFGTVWGIYHALILIGETGQTSIDHV 172
Query: 199 GTAIGVSLTGTLLGIILS 216
+G SL T G+ ++
Sbjct: 173 AGPVGESLIMTAFGLFVA 190
>gi|226330932|ref|ZP_03806450.1| hypothetical protein PROPEN_04855 [Proteus penneri ATCC 35198]
gi|225201727|gb|EEG84081.1| hypothetical protein PROPEN_04855 [Proteus penneri ATCC 35198]
Length = 228
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ +G P IG+ G + GI+ A L + +++ I +L T +G+ +
Sbjct: 130 LGTVGSISPYIGLFGTVWGIMHAFIALGSVKQATLQMVAPGIAEALIATAIGLFAAIPAV 189
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
++ K + Y + + ++
Sbjct: 190 M-AYNRFTQRVNKLEQSYDNFMEEFLTILHRQA 221
>gi|170719354|ref|YP_001747042.1| tonB-system energizer ExbB [Pseudomonas putida W619]
gi|169757357|gb|ACA70673.1| tonB-system energizer ExbB [Pseudomonas putida W619]
Length = 323
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 192 ERVSFRLERLVHASGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 251
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + ++ ++V
Sbjct: 252 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 303
>gi|320104668|ref|YP_004180259.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
gi|319751950|gb|ADV63710.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
Length = 231
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 146 LMDEEIDIIL--YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---SPKILGT 200
+M+ +II +L I MG P +G++G + +I A +S PK L
Sbjct: 106 VMEFHTEIISVLEMRLASIGTIVRMG---PLLGLLGTVASMIAAFARISGAEVDPKTLSG 162
Query: 201 AIGVSLTGTLLGIILSYSLCNPLTS----QIKSTRLKQHRLYI 239
I ++L T G++++ + + + +++ R + R
Sbjct: 163 DISLALWATGSGLLIATPMMV-VANHYHAKLRHLRDRTERQLQ 204
>gi|299769118|ref|YP_003731144.1| protein TolQ [Acinetobacter sp. DR1]
gi|298699206|gb|ADI89771.1| protein TolQ [Acinetobacter sp. DR1]
Length = 232
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILG 199
E ++ + ++ +G P IG+ G + GI+ A + + Q + +
Sbjct: 112 ERILRVGLSRDQSHLEYGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVA 171
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 PGIAEALIATAIGLFAA 188
>gi|241767823|ref|ZP_04765411.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241361113|gb|EER57786.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 210
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ + S ++ ++ + + L ++ +G + P +G++G + GI A+ ++
Sbjct: 85 LATAGSLSQQLTRVLRDALHGALGRLQWGQVLLATVGSTAPFVGLLGTVWGIYHALTAMA 144
Query: 193 Q----SPKILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRL 232
+ + +G +L T G+ +L+Y++ +I++
Sbjct: 145 GAGQITIDRVAGPVGEALVMTAAGLAVAIPAVLAYNVFGRFVGRIEADLE 194
>gi|283780652|ref|YP_003371407.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283439105|gb|ADB17547.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 313
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 16/131 (12%)
Query: 93 SRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSY-EIENLMDEEI 151
+ + D I P+ N +R +++ R E+E+ + E
Sbjct: 119 GQLSLQGGFDPRKAYRICQQYPSSAANI---------VRSMLLKVGRPLSEVEHTVSEAS 169
Query: 152 DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA--MGNLSQSPK----ILGTAIGVS 205
++ P +G++G + G+I A M + + + L I +
Sbjct: 170 AREADRLYGNVRWLNLAASVTPLLGLLGTVQGMILAFHMTTVIDAGQNKSIALAEGIYTA 229
Query: 206 LTGTLLGIILS 216
L T G+ ++
Sbjct: 230 LVTTFAGLTVA 240
>gi|229587785|ref|YP_002869904.1| putative transporter-like membrane protein [Pseudomonas fluorescens
SBW25]
gi|229359651|emb|CAY46494.1| putative transport-related membrane protein [Pseudomonas
fluorescens SBW25]
Length = 239
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 101 RLERALRQQIVRERRSLETGLAVVASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 160
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 161 VAGPIGAALVATGVGIAVA 179
>gi|197284478|ref|YP_002150350.1| colicin uptake protein TolQ [Proteus mirabilis HI4320]
gi|227356656|ref|ZP_03841042.1| TonB family auxiliary protein TolQ [Proteus mirabilis ATCC 29906]
gi|194681965|emb|CAR41393.1| biopolymer transport protein [Proteus mirabilis HI4320]
gi|227163164|gb|EEI48095.1| TonB family auxiliary protein TolQ [Proteus mirabilis ATCC 29906]
Length = 228
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
+ +G P IG+ G + GI+ A L + +++ I +L T +G+ +
Sbjct: 130 LGTVGSISPYIGLFGTVWGIMHAFIALGSVKQATLQMVAPGIAEALIATAIGLFAAIPAV 189
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
++ K + Y + + ++
Sbjct: 190 M-AYNRFTQRVNKLEQSYDNFMEEFLTILHRQA 221
>gi|170022923|ref|YP_001719428.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis YPIII]
gi|169749457|gb|ACA66975.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis YPIII]
Length = 345
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 204 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 263
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 264 QTTNLAVVAPGIAEALLATALGLVAA 289
>gi|51597681|ref|YP_071872.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
pseudotuberculosis IP 32953]
gi|145597776|ref|YP_001161852.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Pestoides F]
gi|186896821|ref|YP_001873933.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis PB1/+]
gi|51590963|emb|CAH22621.1| Possible MotA/TolQ/ExbB proton channel family protein [Yersinia
pseudotuberculosis IP 32953]
gi|145209472|gb|ABP38879.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Pestoides F]
gi|186699847|gb|ACC90476.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis PB1/+]
Length = 345
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 204 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 263
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 264 QTTNLAVVAPGIAEALLATALGLVAA 289
>gi|89095499|ref|ZP_01168407.1| putative TonB system transport protein [Oceanospirillum sp. MED92]
gi|89080246|gb|EAR59510.1| putative TonB system transport protein [Oceanospirillum sp. MED92]
Length = 171
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYS 218
I ++ P IG++G + G+I+ +L + +P+++ + + T+ G+ ++ +
Sbjct: 84 QMIKNLIMLCPLIGLLGTVTGMIQVFDSLALYGTGNPRMMAAGVASATFPTMTGMAVAVA 143
Query: 219 LCNPLTSQIKSTRLKQHRLYII 240
+++ + +
Sbjct: 144 GLL-FYNRLSRWSESERNNLRL 164
>gi|296162183|ref|ZP_06844979.1| protein TolQ [Burkholderia sp. Ch1-1]
gi|295887569|gb|EFG67391.1| protein TolQ [Burkholderia sp. Ch1-1]
Length = 225
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 45/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 92 EFLKGKEKRLNDPGAILDGARRAMRAAFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ A L+ + + I +LT T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGLFAA 188
>gi|223044266|ref|ZP_03614302.1| mmpl domain protein [Staphylococcus capitis SK14]
gi|222442330|gb|EEE48439.1| mmpl domain protein [Staphylococcus capitis SK14]
Length = 949
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 21/193 (10%)
Query: 33 EIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL-LYILMYNLKK 91
+IV G + ++ +P + L + + ++ + D K + I+ ++ KK
Sbjct: 22 AWLIVLGVIITPLMINSPKFDDDITMNGLKSLDTNDKITKEFHQDSQKASMKIVFHSNKK 81
Query: 92 GS------RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN 145
+ + E +D+ + + ++ D + +++
Sbjct: 82 NGITDKDTKKDIEKALDNIKQDDDYVQNVSNPYDSHQVNDDKDTAIATVNYVVNQTALQD 141
Query: 146 ----LMDEEIDIILYEK------LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
++D E+D + + + S +G S +GIV A + ++ G+L
Sbjct: 142 SSKKIIDRELDDVKADHNLKIEQTQGGSMNSEVGGSSELVGIVTAFIILLITFGSLI--- 198
Query: 196 KILGTAIGVSLTG 208
G I +L G
Sbjct: 199 -AAGMPIVSALIG 210
>gi|213157114|ref|YP_002319159.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
gi|213056274|gb|ACJ41176.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
Length = 211
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFWFIDFGSAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 148 PGISKALITTAVGMLIA 164
>gi|149191102|ref|ZP_01869361.1| flagellar motor protein PomA [Vibrio shilonii AK1]
gi|148835030|gb|EDL52008.1| flagellar motor protein PomA [Vibrio shilonii AK1]
Length = 36
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 242 KKALIAYMNGAIPQVAIEYGRKVLPLSER 270
++A +G P+V Y + L S+R
Sbjct: 1 MDGVLAIQDGQNPRVIDGYLKNYLNESKR 29
>gi|121611697|ref|YP_999504.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121556337|gb|ABM60486.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 235
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
++ +G P +G+ G + GI+ A + + I +L T +G+ +
Sbjct: 132 LASVGSVSPYVGLFGTVWGIMHAFTGFAGMAQVTLATVAPGIAEALVATAIGLFAA 187
>gi|320104145|ref|YP_004179736.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
gi|319751427|gb|ADV63187.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
Length = 292
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS------P 195
E + M+ + ++ E ++ +G P IG+VG ILG+I A L+ S P
Sbjct: 165 EAKEAMEFVSNEVVTEMEAKISYLAVIGTLGPMIGLVGTILGMISAFRELATSVTAQPKP 224
Query: 196 KILGTAIGVSLTGTLLGIILSYS---LCNPLTSQIKSTRLKQHRLYIIVKKALI 246
+ I +L TL G+ L+ ++I ++ ++ +++
Sbjct: 225 YKVAEGIMEALFLTLEGVALAVPAIFFFAMFRNRIARVTVEANKSAERTINSIV 278
>gi|300310552|ref|YP_003774644.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum
seropedicae SmR1]
gi|300073337|gb|ADJ62736.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum
seropedicae SmR1]
Length = 234
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ E+D + ++ +G P +G+ G + GI+ A L+ + +
Sbjct: 124 MRAAYQREMDALESHL----AFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAV 179
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 180 APGIAEALIATAIGLFAA 197
>gi|183601006|ref|ZP_02962499.1| hypothetical protein PROSTU_04622 [Providencia stuartii ATCC 25827]
gi|188019339|gb|EDU57379.1| hypothetical protein PROSTU_04622 [Providencia stuartii ATCC 25827]
Length = 310
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAI 202
++ I I + ++ +G P +G+ G + GI+ + + + + ++ I
Sbjct: 193 LERSIAAISRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGI 252
Query: 203 GVSLTGTLLGIILS 216
+L T +G+I +
Sbjct: 253 AEALLATAIGLIAA 266
>gi|170691328|ref|ZP_02882493.1| protein TolQ [Burkholderia graminis C4D1M]
gi|295675615|ref|YP_003604139.1| protein TolQ [Burkholderia sp. CCGE1002]
gi|307728554|ref|YP_003905778.1| protein TolQ [Burkholderia sp. CCGE1003]
gi|323524841|ref|YP_004226994.1| protein TolQ [Burkholderia sp. CCGE1001]
gi|170143533|gb|EDT11696.1| protein TolQ [Burkholderia graminis C4D1M]
gi|295435458|gb|ADG14628.1| protein TolQ [Burkholderia sp. CCGE1002]
gi|307583089|gb|ADN56487.1| protein TolQ [Burkholderia sp. CCGE1003]
gi|323381843|gb|ADX53934.1| protein TolQ [Burkholderia sp. CCGE1001]
Length = 225
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 45/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 92 EFLKGKEKRLNDPGAILDGARRAMRAAFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ A L+ + + I +LT T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGLFAA 188
>gi|153812961|ref|ZP_01965629.1| hypothetical protein RUMOBE_03368 [Ruminococcus obeum ATCC 29174]
gi|149830908|gb|EDM85998.1| hypothetical protein RUMOBE_03368 [Ruminococcus obeum ATCC 29174]
Length = 543
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 78 VLKLLYILMYNLKK-GSRNETENHIDDPYNSTIFTSIPTV--LENNELTTFICDYMRMII 134
V+ L + + S + ++D + + + + ++ M+
Sbjct: 48 VVGLFGGMFRMNRLAQSLGDAAQELEDMFKMPGRVAPDKIESMNGIFHNHYLDAKMKAFT 107
Query: 135 VGNARSYE----IENLM-DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM- 188
G A+S E IE + +E++D+ +++KL + + +IGI+G +G++ +
Sbjct: 108 DGIAKSQEGIVDIEEYINEEDLDLHIHKKL-----LEMAPDLFTSIGILGTFVGLVWGLK 162
Query: 189 -------GNLSQSPKILGTAIGVSLTGTLLGIILS 216
++ S L I V+ ++ GI S
Sbjct: 163 DFQPANYEAMTSSVSSLVDGIKVAFLTSIYGIAFS 197
>gi|110638289|ref|YP_678498.1| Zn-dependent protease [Cytophaga hutchinsonii ATCC 33406]
gi|110280970|gb|ABG59156.1| possible Zn-dependent protease [Cytophaga hutchinsonii ATCC 33406]
Length = 273
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 14/106 (13%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYS 218
+ HAI+H G + I+ + G + +A+ L GT G Y
Sbjct: 142 HEVAHAIAHHGNERMSQEIIA------QTGGQVVDYALSTKSALTRQLFGTAYGAGAQYG 195
Query: 219 LCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGRKV 264
+ P + + +S K +++ M G P VA+++ +++
Sbjct: 196 VILPFSRKHESEADKMGLVFMA--------MAGYDPHVAVDFWKRM 233
>gi|330955761|gb|EGH56021.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 143
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI+ A+ + S S +
Sbjct: 3 RLERALRQQIVRERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLET 62
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 63 VAGPIGAALVATGVGIAVA 81
>gi|326560396|gb|EGE10778.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 7169]
Length = 182
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E + ++I YE K + P IG+ G + GI A+ ++ + + +
Sbjct: 72 EQKLLQQIARHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVA 131
Query: 204 V----SLTGTLLGIILSYS--LCNPLTSQIKSTR 231
+L T LG+ ++ + + ++I
Sbjct: 132 GPVGEALIMTGLGLAVAIPAVIFYNIATRINKQA 165
>gi|311694957|gb|ADP97830.1| MotA/TolQ/ExbB proton channel family protein [marine bacterium
HP15]
Length = 208
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R++ G + +M E I+ ++++ + + + + P +G++G ++G+IK
Sbjct: 72 RILAGGLLNAKHGREIMKESIEHEASQVIHDLERFLNPLGTVATITPLLGLLGTVIGMIK 131
Query: 187 AMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + L I +L T G+ ++
Sbjct: 132 VFAEIQLAGVGNAGNLAGGISEALITTAAGLSVA 165
>gi|257458274|ref|ZP_05623423.1| MotA/TolQ/ExbB proton channel [Treponema vincentii ATCC 35580]
gi|257444301|gb|EEV19395.1| MotA/TolQ/ExbB proton channel [Treponema vincentii ATCC 35580]
Length = 229
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKI 197
+E + + ++ + + + +S + P +G++G + G++ A + S +
Sbjct: 99 LEEAFERTVQGLIAVQERGFILLSRIAAVAPLLGLLGTVTGLMAAFQKIAALGGSVDIAV 158
Query: 198 LGTAIGVSLTGTLLGIILS 216
L I ++ T G++ +
Sbjct: 159 LSGGIWEAMITTATGLVTA 177
>gi|227112807|ref|ZP_03826463.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 239
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 98 DNNGIKERTAFRLERRVAATGRHMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQT 157
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 158 QTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|149370018|ref|ZP_01889869.1| putative biopolymer transport protein [unidentified eubacterium
SCB49]
gi|149356509|gb|EDM45065.1| putative biopolymer transport protein [unidentified eubacterium
SCB49]
Length = 232
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQSPKI 197
+I ++ + +Y+ K ++ + + P IG +G ++G++ + S ++
Sbjct: 116 EDINTAIENAGRLEVYKLEKNVSVLATIAGAAPMIGFLGTVIGMVLAFHTLATSSGQAEM 175
Query: 198 --LGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 176 GLLAEGIYTAMTTTVAGLIVG 196
>gi|326571203|gb|EGE21227.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis BC7]
gi|326573122|gb|EGE23091.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis CO72]
Length = 182
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E + ++I YE K + P IG+ G + GI A+ ++ + + +
Sbjct: 72 EQKLLQQIARHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVA 131
Query: 204 V----SLTGTLLGIILSYS--LCNPLTSQIKSTR 231
+L T LG+ ++ + + ++I
Sbjct: 132 GPVGEALIMTGLGLAVAIPAVIFYNIATRINKQA 165
>gi|293609861|ref|ZP_06692163.1| hypothetical protein HMPREF0013_02011 [Acinetobacter sp. SH024]
gi|292828313|gb|EFF86676.1| hypothetical protein HMPREF0013_02011 [Acinetobacter sp. SH024]
Length = 232
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILG 199
E ++ + ++ +G P IG+ G + GI+ A + + Q + +
Sbjct: 112 ERILHVGLSRDQSHLEYGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVA 171
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 172 PGIAEALIATAIGLFAA 188
>gi|227326942|ref|ZP_03830966.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 230
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 89 DNNGIKERTAFRLERRVAATGRHMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQT 148
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 149 QTTNLAVVAPGIAEALLATAIGLVAA 174
>gi|222106934|ref|YP_002547725.1| tonB-system energizer ExbB [Agrobacterium vitis S4]
gi|221738113|gb|ACM39009.1| tonB-system energizer ExbB [Agrobacterium vitis S4]
Length = 341
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ + + ++ +G P +G+ G + GI+ + +SQ +
Sbjct: 207 ERVSSALSRIESRAGRRMTAGTGILATIGSIGPFVGLFGTVWGIMNSFIGISQSQTTNLA 266
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 267 VVAPGIAEALLATAIGLVAA 286
>gi|322435210|ref|YP_004217422.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321162937|gb|ADW68642.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 256
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLGIILS 216
++ + P IG+ G ++GII A L S + I +L T GI+++
Sbjct: 148 LATIANIAPFIGLFGTVMGIIDAFHGLGASGTATLRAVAPGISEALITTAAGIVVA 203
>gi|253996019|ref|YP_003048083.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253982698|gb|ACT47556.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 201
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---SQSPKI 197
+ ++E + ++ K + + P +G++G ++G+++ G
Sbjct: 86 EVTKESIEETARAVAHQMEKYLSTLGTIATVSPLLGLLGTVIGMVELFGAFTTQGHDVAQ 145
Query: 198 LGTAIGVSLTGTLLGIILS 216
I V+L T GI+++
Sbjct: 146 FARGISVALYNTAAGIVVA 164
>gi|326795255|ref|YP_004313075.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326546019|gb|ADZ91239.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 204
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKA----MGNLSQSPKILGTAIGVSLTGTLL 211
+E + + + P +G++G ++G+IK M + + +L I +L T
Sbjct: 101 HELERFMSTLGTIAAISPLLGLLGTVVGMIKVFSVLMEEGAGNTSLLAGGISEALLTTAA 160
Query: 212 GIILS 216
G+ ++
Sbjct: 161 GLGIA 165
>gi|326795236|ref|YP_004313056.1| protein TolQ [Marinomonas mediterranea MMB-1]
gi|326546000|gb|ADZ91220.1| protein TolQ [Marinomonas mediterranea MMB-1]
Length = 226
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 30/177 (16%)
Query: 49 NPLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPY 105
VI L + ++ + D+ KL L + +K I++ +
Sbjct: 27 FSWIVIFQRVRILKRAKVVRNRFEEQFWSGIDLSKLYKQLTADGRKV------EGIENIF 80
Query: 106 NSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYH-- 163
S I F +R + + + E+ H
Sbjct: 81 TSGI-------------REFTR--LRQGSSVEPDAVMEGVARSMRVALYKEEEKLDQHLP 125
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ + L+Q + + I +L T +G+ +
Sbjct: 126 FLATVGSISPYIGLFGTVWGIMHSFIGLAQVQQATIATVAPGIAEALIATAIGLAAA 182
>gi|319956264|ref|YP_004167527.1| outer membrane transport energization protein exbb [Nitratifractor
salsuginis DSM 16511]
gi|319418668|gb|ADV45778.1| outer membrane transport energization protein ExbB [Nitratifractor
salsuginis DSM 16511]
Length = 145
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI----GV 204
+ + + +S +G S P IG++G +LGII L Q+ ++ +I +
Sbjct: 45 RHKEALETDLTANTTILSSIGSSAPYIGLLGTVLGIIITFYLLGQTKQMDAGSIMTSLSL 104
Query: 205 SLTGTLLGIILS 216
+L T +G++++
Sbjct: 105 ALKATAMGLVVA 116
>gi|296113018|ref|YP_003626956.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
gi|295920712|gb|ADG61063.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
gi|326564001|gb|EGE14246.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 103P14B1]
gi|326564055|gb|EGE14299.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 12P80B1]
gi|326570522|gb|EGE20562.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis BC8]
gi|326576119|gb|EGE26035.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 101P30B1]
gi|326577069|gb|EGE26963.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis O35E]
Length = 182
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAIG 203
E + ++I YE K + P IG+ G + GI A+ ++ + + +
Sbjct: 72 EQKLLQQIARHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVA 131
Query: 204 V----SLTGTLLGIILSYS--LCNPLTSQIKSTR 231
+L T LG+ ++ + + ++I
Sbjct: 132 GPVGEALIMTGLGLAVAIPAVIFYNIATRINKQA 165
>gi|171463100|ref|YP_001797213.1| protein TolQ [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171192638|gb|ACB43599.1| protein TolQ [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 218
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ + L+ + I +L T +G+ +
Sbjct: 124 LASVGSVSPYIGLFGTVWGIMHSFRGLANVQNAILSAVAPGIAEALIATAIGLFAA 179
>gi|149927729|ref|ZP_01915981.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
gi|149823555|gb|EDM82785.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
Length = 219
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ G P IG+ G + GI+ A + N+ Q + + I +L T +G+ +
Sbjct: 128 LASAGSVSPYIGLFGTVWGIMHAFVGLANVQQATLASVAPGIAEALIATAIGLFAA 183
>gi|288818978|ref|YP_003433326.1| biopolymer transport protein [Hydrogenobacter thermophilus TK-6]
gi|288788378|dbj|BAI70125.1| biopolymer transport protein [Hydrogenobacter thermophilus TK-6]
gi|308752563|gb|ADO46046.1| tonB-system energizer ExbB [Hydrogenobacter thermophilus TK-6]
Length = 141
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGT 209
I E K H I+ +G + P IG++G +LGI+ + Q K + + ++L T
Sbjct: 48 IELELTKNMHWIATIGSNAPYIGLLGTVLGIMLTFYTIGQEGFVDTKKVMVGLALALKAT 107
Query: 210 LLGIILS 216
+G++++
Sbjct: 108 AVGLLVA 114
>gi|326317083|ref|YP_004234755.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373919|gb|ADX46188.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 297
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIG 203
+ ID + ++ +G + P +G+ G + GI A+ + S + +G
Sbjct: 182 MQAIDAVGDRLQGGLAVLATVGSTAPFVGLFGTVWGIYHALTAIGLAGQASIDKVAGPVG 241
Query: 204 VSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 242 EALIMTAIGLAAA 254
>gi|296135462|ref|YP_003642704.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|295795584|gb|ADG30374.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 238
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 48/158 (30%), Gaps = 23/158 (14%)
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
K + + E+ D P + ++ L + D + ++ A + M
Sbjct: 61 KQLKAKVEDDADSPAAQVVAVALQHDLADP--LDHFTDRLEEAVMDQAPRIDRGLWM--- 115
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI---LGTAIGVSLT 207
+ + P +G++G I+G+ LS + +G +L
Sbjct: 116 --------------LDTIVTLAPLLGLLGTIIGMFNTFSALSNPGAATQAVTGGVGEALL 161
Query: 208 GTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
T G+ ++ + + +K L
Sbjct: 162 ATAAGLFIAVLGLVAF-NALNQRVRLVMHQLERIKLML 198
>gi|77456447|ref|YP_345952.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77380450|gb|ABA71963.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 241
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+E + ++I ++ +G + P IG+ G + GI++A+ + S S +
Sbjct: 102 RLERALRQQIVRERRSLETGLAVVASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET 161
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ IG +L T +GI ++
Sbjct: 162 VAGPIGAALVATGVGIAVA 180
>gi|86131527|ref|ZP_01050125.1| MotA/TolQ/ExbB proton channel family protein [Dokdonia donghaensis
MED134]
gi|85817972|gb|EAQ39140.1| MotA/TolQ/ExbB proton channel family protein [Dokdonia donghaensis
MED134]
Length = 234
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQSPKI 197
+I ++ + + +Y+ + ++ + + P IG +G ++G++ + S ++
Sbjct: 118 EDINTAIENQGKLEVYKLERNVSVLATIAGAAPMIGFLGTVIGMVLAFHTLATSSGQAEM 177
Query: 198 --LGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 178 GTLAEGIYTAMTTTVAGLIVG 198
>gi|330999341|ref|ZP_08323058.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
gi|329575199|gb|EGG56750.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
Length = 201
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAIL 182
T ++ +Y + + E ++ E I + K ++ +G P +G++G I+
Sbjct: 65 TPWLKNYASALGSSEKMPF-YEGVLAENISSLAAMMDKRLPLLATLGRISPLLGLLGTII 123
Query: 183 GIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILSYSLCNP 222
G+I+ ++Q ++L I +L T G+I++
Sbjct: 124 GMIQTFAVIAQSRSGIDMELLAEGIWQALITTATGLIIAIPAVFC 168
>gi|329888412|ref|ZP_08267010.1| protein TolQ [Brevundimonas diminuta ATCC 11568]
gi|328846968|gb|EGF96530.1| protein TolQ [Brevundimonas diminuta ATCC 11568]
Length = 262
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
GN I+ +D I + +S + + P IG+ G + GI+ A ++
Sbjct: 105 DTQGNMLIARIDRALDSVIARESQKIENGLGVLSVVATASPFIGLFGTVWGIMNAFDSIA 164
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
+ + + AI +L T +G+ +
Sbjct: 165 AAGNTNLTTVAPAIAEALFATAIGLAAA 192
>gi|242277831|ref|YP_002989960.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242120725|gb|ACS78421.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 196
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ + + P IG++G +LG+I+A LS +L I +L T G+ ++
Sbjct: 107 LATVATAAPLIGLLGTVLGMIQAFSRLSASGNVDITMLAGGIWQALLTTAAGLSVA 162
>gi|329115466|ref|ZP_08244215.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
gi|326695244|gb|EGE46936.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
Length = 271
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAI 202
++ ++ ++ +G + P IG+ G + GI+ + + + S ++ I
Sbjct: 139 LERLEAAEGRRLMRGTGLLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGI 198
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 199 AEALLATALGLVAA 212
>gi|260772524|ref|ZP_05881440.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
gi|260611663|gb|EEX36866.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
Length = 227
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 152 DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLT 207
++ E P+ ++ +G P IG+ G + GI+ A L + ++ I +L
Sbjct: 120 EVDELEAHLPF--LATVGSITPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALV 177
Query: 208 GTLLGIILS 216
T +G+ +
Sbjct: 178 ATAMGLFAA 186
>gi|171909542|ref|ZP_02925012.1| MotA/TolQ/ExbB proton channel [Verrucomicrobium spinosum DSM 4136]
Length = 207
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ I + E + +IL+ + + P +G++GA++G++
Sbjct: 66 GIIAISGKHETREENNEACETAAHVILHRLETGVPLLEVIVTVSPLLGLLGAVVGLVTVF 125
Query: 189 GNL-------SQSPKILGTAIGVSLTGTLLGIILS 216
+ + I +L T+ G++++
Sbjct: 126 STFGTGNVVPDADTQQVAKGIAEALHSTIAGLLVA 160
>gi|71892113|ref|YP_277845.1| hypothetical protein BPEN_345 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796219|gb|AAZ40970.1| TolQ [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 249
Score = 36.8 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 12/84 (14%)
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK-------- 196
+ M I+ L I +G P +G+ G +LGII L ++
Sbjct: 107 DSMHTAINTELKSLEDYIPLIGTIGSISPYLGLFGTVLGIIHVFIELGKTTATNNVATQM 166
Query: 197 ----ILGTAIGVSLTGTLLGIILS 216
I+ I SL T +G+ ++
Sbjct: 167 IHMQIVAPGIAESLISTAIGLFVA 190
>gi|238028093|ref|YP_002912324.1| Biopolymer transport protein [Burkholderia glumae BGR1]
gi|237877287|gb|ACR29620.1| Biopolymer transport protein [Burkholderia glumae BGR1]
Length = 246
Score = 36.8 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 11/135 (8%)
Query: 86 MYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN 145
+ R+ N D+P + + + + D M S I
Sbjct: 62 FDKGVQKLRDAAPNVQDNPLLALALAGQEAAEHHQQTQPHLHDRM-------DVSEWITR 114
Query: 146 LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTA 201
+ + +D + ++ +G + P +G+ G + GI A+ + S +
Sbjct: 115 CLKDTMDGSVARMQSGLAVLASIGSTAPFVGLFGTVWGIYHALLTIGATGQTSIDQVAGP 174
Query: 202 IGVSLTGTLLGIILS 216
+G SL T G+ ++
Sbjct: 175 VGESLIMTAFGLFVA 189
>gi|268679158|ref|YP_003303589.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
gi|268617189|gb|ACZ11554.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
Length = 195
Score = 36.8 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILG 199
E L++ ++ +S + + P IG+ G ++ I++ L QS ++
Sbjct: 81 EKLLNVCKNVAEKNATSALWMLSIIASTAPFIGLFGTVVSILETFSGLGQSGSASLGVIA 140
Query: 200 TAIGVSLTGTLLGIILS 216
AI +L T GI ++
Sbjct: 141 PAISEALVATAAGIFVA 157
>gi|113970706|ref|YP_734499.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113885390|gb|ABI39442.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
Length = 228
Score = 36.8 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
+Y R+ + N + + + + L +L+ A ++ +G + P IG+ G +
Sbjct: 87 FKEYSRLNKLNNKVPDAVMDGTSRAMRVTLSRELEKLEANLPLLATIGSTSPYIGLFGTV 146
Query: 182 LGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
GI+ + + ++ I +L T +G+ +
Sbjct: 147 WGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLFAA 185
>gi|310816632|ref|YP_003964596.1| ExbB family protein [Ketogulonicigenium vulgare Y25]
gi|308755367|gb|ADO43296.1| ExbB family protein [Ketogulonicigenium vulgare Y25]
Length = 291
Score = 36.8 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLL 211
+ ++ +G P +G+ G + GI+ + ++++ + ++ I +L T +
Sbjct: 179 RRLQRGTGILATVGAVAPFVGLFGTVWGIMNSFVSIAETQTTNLAVVAPGIAEALLATAI 238
Query: 212 GIILS 216
G++ +
Sbjct: 239 GLVAA 243
>gi|192362375|ref|YP_001981791.1| ExbB [Cellvibrio japonicus Ueda107]
gi|190688540|gb|ACE86218.1| ExbB [Cellvibrio japonicus Ueda107]
Length = 239
Score = 36.8 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
+ ID + ++ +G + P IG+ G + GI A+ + S + +
Sbjct: 112 LRGSIDESAERLQRGLAILASVGSTSPFIGLFGTVWGIYHALVGIGVSGQASIDKVAGPV 171
Query: 203 GVSLTGTLLGIILS 216
G +L T G+ ++
Sbjct: 172 GEALIMTAFGLAVA 185
>gi|126173972|ref|YP_001050121.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|125997177|gb|ABN61252.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
Length = 228
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
+Y R+ + + + + + + L +++ A + +G + P IG+ G +
Sbjct: 87 FKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKLEANLPLFATIGSTSPYIGLFGTV 146
Query: 182 LGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
GI+ + + ++ I +L T +G+ +
Sbjct: 147 WGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLFAA 185
>gi|83721248|ref|YP_441756.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
gi|167580571|ref|ZP_02373445.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis TXDOH]
gi|257137923|ref|ZP_05586185.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
gi|83655073|gb|ABC39136.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
Length = 235
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 105 ERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 164
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 165 QIENVAGPVGEALIMTAFGLVVA 187
>gi|314934766|ref|ZP_07842125.1| membrane protein YdfJ [Staphylococcus caprae C87]
gi|313652696|gb|EFS16459.1| membrane protein YdfJ [Staphylococcus caprae C87]
Length = 949
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 21/193 (10%)
Query: 33 EIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKL-LYILMYNLKK 91
+IV G + ++ +P + L + + ++ + D K + I+ ++ KK
Sbjct: 22 AWLIVLGVIITPLMINSPKFDDDITMNGLKSLDTNDKITKEFHQDSQKASMKIVFHSDKK 81
Query: 92 GS------RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN 145
+ + E +D+ + + ++ D + +++
Sbjct: 82 NGITDKDTKKDIEKALDNIKQDDDYVQNVSNPYDSHQVNDDKDTAIATVNYVVNQTALQD 141
Query: 146 ----LMDEEIDIILYEK------LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP 195
++D E+D + + + S +G S +GIV A + ++ G+L
Sbjct: 142 SSKKIIDRELDDVKADHNLKIEQTQGGSMNSEVGGSSELVGIVTAFIILLITFGSLI--- 198
Query: 196 KILGTAIGVSLTG 208
G I +L G
Sbjct: 199 -AAGMPIVSALIG 210
>gi|254469020|ref|ZP_05082426.1| protein TolQ [beta proteobacterium KB13]
gi|207087830|gb|EDZ65113.1| protein TolQ [beta proteobacterium KB13]
Length = 223
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILSYSLC 220
++ +G P IG+ G + GI+ + LS + I +L T +G+ +
Sbjct: 132 LASVGSVSPYIGLFGTVWGIMNSFIGLSNVAQSTLAQVAPGIAEALIATAIGLFAAIPAV 191
Query: 221 NP---LTSQIKSTRLKQHRLYI 239
+++ ++
Sbjct: 192 IAYNRFAAKVDRLAIRYESFME 213
>gi|332344963|gb|AEE58297.1| tonB-system energizer ExbB [Escherichia coli UMNK88]
Length = 239
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 62/171 (36%), Gaps = 20/171 (11%)
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
+ + V IF K++ LK L+ + N I + S +
Sbjct: 25 LILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARS---LNLANDIAADFGSKSLSLH 81
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMG 169
NEL + G+ + I+ ++ + + + + ++ +G
Sbjct: 82 LLNEAQNELE---------LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIG 132
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
P +G+ G + GI+ + ++Q + ++ I +L T +G++ +
Sbjct: 133 AISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|329119626|ref|ZP_08248307.1| TonB family auxiliary protein ExbB [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464223|gb|EGF10527.1| TonB family auxiliary protein ExbB [Neisseria bacilliformis ATCC
BAA-1200]
Length = 220
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
A++ +G S P IG+ G + GI KA+ N+ Q S + IG +L T +G+ +
Sbjct: 126 ALASIGSSAPFIGLFGTVWGIHKALLNIGQSGQVSIAAVAGPIGEALIATAVGLFAA 182
>gi|238782872|ref|ZP_04626901.1| TonB complex protein [Yersinia bercovieri ATCC 43970]
gi|238716295|gb|EEQ08278.1| TonB complex protein [Yersinia bercovieri ATCC 43970]
Length = 332
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 191 DNNGIKERAAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 250
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 251 QTTNLAVVAPGIAEALLATALGLVAA 276
>gi|195952777|ref|YP_002121067.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
gi|195932389|gb|ACG57089.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
Length = 151
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
++ G + P IG+ G +LG+IKA +L S K++ I +L T +G+ ++
Sbjct: 64 ILATFGNNAPFIGLFGTVLGVIKAFNDLGNSSQFGVKVVMEGISQALVSTAMGLFVA 120
>gi|90418655|ref|ZP_01226566.1| biopolymer transport protein exbB [Aurantimonas manganoxydans
SI85-9A1]
gi|90336735|gb|EAS50440.1| biopolymer transport protein exbB [Aurantimonas manganoxydans
SI85-9A1]
Length = 289
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 160 KPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIIL 215
+ ++ +G + P +G+ G + GI+ A +SQ + ++ I +L T +G++
Sbjct: 176 RGTGILATIGSTAPFVGLFGTVWGIMNAFIGISQANTTNLAVVAPGIAEALLATAIGLVA 235
Query: 216 S 216
+
Sbjct: 236 A 236
>gi|330991875|ref|ZP_08315824.1| Protein tolQ [Gluconacetobacter sp. SXCC-1]
gi|329760896|gb|EGG77391.1| Protein tolQ [Gluconacetobacter sp. SXCC-1]
Length = 221
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+ M I + + ++ +G P IG+ G + GI+ A G++ + + +
Sbjct: 102 RVNRAMAITITREMDRLNRWIIFLATIGPVAPFIGLFGTVWGIMHAFGSIAAMHNTNLSV 161
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 162 VAPGISEALFATAIGLVTA 180
>gi|294339570|emb|CAZ87929.1| putative MotA/TolQ/ExbB proton channel [Thiomonas sp. 3As]
Length = 238
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 35/106 (33%), Gaps = 4/106 (3%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI---LG 199
+ ++E + + + + P +G++G I+G+ LS +
Sbjct: 94 FTDRLEEAVMDQAPRIDRGLWMLDTIVTLAPLLGLLGTIIGMFNTFSALSNPGAATQAVT 153
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+G +L T G+ ++ + + +K L
Sbjct: 154 GGVGEALLATAAGLFIAVLGLVAF-NALNQRVRLVMHQLERIKLML 198
>gi|224025358|ref|ZP_03643724.1| hypothetical protein BACCOPRO_02097 [Bacteroides coprophilus DSM
18228]
gi|224018594|gb|EEF76592.1| hypothetical protein BACCOPRO_02097 [Bacteroides coprophilus DSM
18228]
Length = 239
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 112 SIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGES 171
+ ++ MRM N +++ ++ +I + + I+ +
Sbjct: 96 NYCRMINTPSARMIEKGIMRM----NRPVADVQAAIENTGNIEVAKLENGLSIIATISGG 151
Query: 172 LPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILS 216
P +G +G + G+++A N++ +L + I ++ T+ G+++
Sbjct: 152 APMLGFLGTVTGMVQAFWNMANAGNNIDITLLSSGIYEAMITTVGGLVVG 201
>gi|254253143|ref|ZP_04946461.1| MotA/TolQ/ExbB proton channel [Burkholderia dolosa AUO158]
gi|124895752|gb|EAY69632.1| MotA/TolQ/ExbB proton channel [Burkholderia dolosa AUO158]
Length = 237
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 19/174 (10%), Positives = 47/174 (27%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 46 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 103
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR +++ + ++
Sbjct: 104 EFLKAKEKRLSDPGLVLDGARRAMRASFQREMD------VLESNL-----------AFLA 146
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 147 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 200
>gi|167913730|ref|ZP_02500821.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 112]
gi|254296819|ref|ZP_04964273.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|157806604|gb|EDO83774.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
Length = 242
Score = 36.8 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQGG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLMIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|328470246|gb|EGF41157.1| ExbB-like protein [Vibrio parahaemolyticus 10329]
Length = 230
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 61/166 (36%), Gaps = 14/166 (8%)
Query: 93 SRNETENHID--DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
++ H+ DP NS ++ L + M + A+S E+
Sbjct: 43 GKSAIRQHLASLDPTNSRDIEALADELSGKRPLLYRGVAMLLAHHSFAKSLR-EDAAGMW 101
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVS 205
+ ++ ++ +G P IG++G +LG+I+ + + +P L +G++
Sbjct: 102 LQEKRHQLHSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLA 161
Query: 206 LTGTLLGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ T G+I++ + ++ + + + +
Sbjct: 162 MRTTAAGLIIALPAISGAQIIGLWADRVLAKLEHTLNYVNLWLEGI 207
>gi|297539697|ref|YP_003675466.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297259044|gb|ADI30889.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 247
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP-- 195
A+ + ++ I + ++ +G P +G+ G + GI A+ ++SQS
Sbjct: 103 AQDEFVARALNRSIAEENTKMENGLSVLASVGSVSPFVGLFGTVWGIYHALASISQSGQA 162
Query: 196 --KILGTAIGVSLTGTLLGIILS 216
+ +G +L T LG+ ++
Sbjct: 163 TLDKVAGPVGEALIMTALGLAVA 185
>gi|332851805|ref|ZP_08433730.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332865815|ref|ZP_08436599.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332729812|gb|EGJ61147.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332735027|gb|EGJ66112.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
Length = 211
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 148 PGISKALITTAVGMLIA 164
>gi|149191986|ref|ZP_01870215.1| ExbB-like protein [Vibrio shilonii AK1]
gi|148834164|gb|EDL51172.1| ExbB-like protein [Vibrio shilonii AK1]
Length = 232
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 11/113 (9%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTL 210
++ + +G P IG++G +LG+I+ ++ +P L +G+++ T
Sbjct: 107 HQLHSGLRILGLIGVISPLIGLLGTVLGLIEMFKGIAAASGNVTPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
G+I++ L +I + + + + + P V
Sbjct: 167 AGLIIALPAIAGSQLIGLWADRIVAKLEHTLNYVNLWLEGVEMQHSDKDPLVV 219
>gi|83859803|ref|ZP_00953323.1| TolQ, tolQ protein [Oceanicaulis alexandrii HTCC2633]
gi|83852162|gb|EAP90016.1| TolQ, tolQ protein [Oceanicaulis alexandrii HTCC2633]
Length = 217
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 5/100 (5%)
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGI 213
+S +G S P IG+ G + GI+ A +++ S ++ I +L T LG+
Sbjct: 119 MEAGLGVLSIIGSSAPFIGLFGTVWGIMNAFRSIAASENTSLAVVAPGISEALFATALGL 178
Query: 214 ILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+ + + + S K + L A +
Sbjct: 179 LAAIPAVI-FFNALSSNLAKYAARLEGLVDDLAALASRGN 217
>gi|313683196|ref|YP_004060934.1| outer membrane transport energization protein exbb [Sulfuricurvum
kujiense DSM 16994]
gi|313156056|gb|ADR34734.1| outer membrane transport energization protein ExbB [Sulfuricurvum
kujiense DSM 16994]
Length = 149
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R++ G+ R + E+ + E+D+ I+ +G + P +G++G +LGI+ +
Sbjct: 35 RLMAYGSIRIGDYESKEELELDL-----GNNVSTIATIGSNAPYVGLLGTVLGIMITFYS 89
Query: 191 LSQ----SPKILGTAIGVSLTGTLLGIILS 216
L PK + T + ++L T +G++++
Sbjct: 90 LGDVGAVDPKKIMTGLALALKATAMGLVVA 119
>gi|229593364|ref|YP_002875483.1| biopolymer transport membrane protein [Pseudomonas fluorescens
SBW25]
gi|229365230|emb|CAY53532.1| biopolymer transport membrane protein [Pseudomonas fluorescens
SBW25]
Length = 322
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 190 ERVAFRLERLVAACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 249
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 250 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAEVLLLV 301
>gi|76817585|ref|YP_337083.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|226199189|ref|ZP_03794750.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pakistan 9]
gi|76582058|gb|ABA51532.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|225928788|gb|EEH24814.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pakistan 9]
Length = 234
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 70 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQGG 122
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 123 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 181
>gi|28900280|ref|NP_799935.1| ExbB-like protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260364369|ref|ZP_05777017.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
gi|260880848|ref|ZP_05893203.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|260895991|ref|ZP_05904487.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|28808591|dbj|BAC61768.1| ExbB-like protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308087043|gb|EFO36738.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|308091553|gb|EFO41248.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|308113690|gb|EFO51230.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
Length = 230
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 61/166 (36%), Gaps = 14/166 (8%)
Query: 93 SRNETENHID--DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
++ H+ DP NS ++ L + M + A+S E+
Sbjct: 43 GKSAIRQHLASLDPTNSRDIEALADELSGKRPLLYRGVAMLLAHHSFAKSLR-EDAAGMW 101
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVS 205
+ ++ ++ +G P IG++G +LG+I+ + + +P L +G++
Sbjct: 102 LQEKRHQLHSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLA 161
Query: 206 LTGTLLGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ T G+I++ + ++ + + + +
Sbjct: 162 MRTTAAGLIIALPAISGAQIIGLWADRVLAKLEHTLNYVNLWLEGI 207
>gi|312114309|ref|YP_004011905.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
gi|311219438|gb|ADP70806.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
Length = 221
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 51/135 (37%), Gaps = 18/135 (13%)
Query: 100 HIDDPYNSTIFTSIPTVLE-----NNELTTFICDYMRMIIV-----GNARSYEIENLMDE 149
I+ F+ LE + ++++ MR I+ R E +++
Sbjct: 35 AIEKFARLIAFSKEVAALESANPADGAPSSWLVARMRQIVDEEPRSSGERPSEFSARLEK 94
Query: 150 EID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTA 201
+ L ++ +G + P +G+ G + GI+++ + S ++
Sbjct: 95 SLHGEAAAQLQRLQAGLPFLATVGSTAPFVGLFGTVWGIMRSFAGIAAAKDTSLAVVAPG 154
Query: 202 IGVSLTGTLLGIILS 216
I +L T +G++ +
Sbjct: 155 IAEALFATAVGLVAA 169
>gi|149187086|ref|ZP_01865391.1| biopolymer transport ExbB protein [Erythrobacter sp. SD-21]
gi|148829238|gb|EDL47684.1| biopolymer transport ExbB protein [Erythrobacter sp. SD-21]
Length = 270
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 65/203 (32%), Gaps = 38/203 (18%)
Query: 19 YAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDV 78
GG ++++ +G F + ++F + +
Sbjct: 23 MEEGGPVA--WSILAVMVIM--SVGSFYILFT------------KLFEQNKVMKQYKG-- 64
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ + S E +D V E +
Sbjct: 65 -----VRTNFWRTNSLKEGATKLDKNSAWRQLVDDALVAEEKHAK----------LNDQM 109
Query: 139 RSYE-IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQ 193
+++ + + I + ++ +G + P +G++G ++GI +A+ N+ S
Sbjct: 110 EAHDWMHGSLARSEHAIQAKLNGGLPFLATVGATAPFVGLLGTVIGIYRALINIGVAGSA 169
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
S + +G +L T +G++++
Sbjct: 170 SIDKVAGPVGEALIMTAIGLLVA 192
>gi|91776754|ref|YP_546510.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710741|gb|ABE50669.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
Length = 555
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ P +G++G ++G++ + + + I +L T+ G+ ++
Sbjct: 462 LTIAISGGPFLGLLGTVVGVMITFAEIAAAGDVNVNAIAPGIAAALMATVAGLAVA 517
>gi|167837877|ref|ZP_02464760.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis MSMB43]
Length = 231
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 105 ERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 164
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 165 QIENVAGPVGEALIMTAFGLVVA 187
>gi|163783488|ref|ZP_02178479.1| hypothetical protein HG1285_08744 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881252|gb|EDP74765.1| hypothetical protein HG1285_08744 [Hydrogenivirga sp. 128-5-R1-1]
Length = 208
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
+ + + GN + ++ LM+ E+ ++ K +S + P +G+ G I G+I
Sbjct: 80 LRAALEEYLKGNRKKSDLSLLMERELSSVVPAVEKNLMLLSAIASIAPLLGLFGTITGLI 139
Query: 186 KAMGNLSQSPKI-----LGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRLKQ 234
K + L + IG +LT G+ + +Y + L + I K+
Sbjct: 140 KVFSAYASVQTEEALRLLASGIGEALTAAATGLIVAIPALFAYWVFRNLGNDIIEKVEKE 199
Query: 235 HR 236
R
Sbjct: 200 AR 201
>gi|53721402|ref|YP_110387.1| bipolymer transport protein [Burkholderia pseudomallei K96243]
gi|126455682|ref|YP_001074558.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1106a]
gi|134282955|ref|ZP_01769657.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|167722444|ref|ZP_02405680.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei DM98]
gi|167741426|ref|ZP_02414200.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 14]
gi|167818609|ref|ZP_02450289.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 91]
gi|167826986|ref|ZP_02458457.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 9]
gi|167848501|ref|ZP_02474009.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei B7210]
gi|167897053|ref|ZP_02484455.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 7894]
gi|167905437|ref|ZP_02492642.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei NCTC 13177]
gi|167921671|ref|ZP_02508762.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei BCC215]
gi|217424563|ref|ZP_03456061.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|237508166|ref|ZP_04520881.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|242311243|ref|ZP_04810260.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|254185301|ref|ZP_04891889.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|254187187|ref|ZP_04893701.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|254198920|ref|ZP_04905338.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|254262799|ref|ZP_04953664.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
gi|52211816|emb|CAH37815.1| putative bipolymer transport protein [Burkholderia pseudomallei
K96243]
gi|126229450|gb|ABN92863.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106a]
gi|134245603|gb|EBA45695.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|157934869|gb|EDO90539.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|169657092|gb|EDS88486.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|184209536|gb|EDU06579.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|217392487|gb|EEC32511.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|235000371|gb|EEP49795.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|242134482|gb|EES20885.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|254213801|gb|EET03186.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
Length = 242
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQGG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|312963866|ref|ZP_07778337.1| TonB system transport protein [Pseudomonas fluorescens WH6]
gi|311281901|gb|EFQ60511.1| TonB system transport protein [Pseudomonas fluorescens WH6]
Length = 325
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 193 ERVSFRLERLVAACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 252
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 253 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAEVLLLV 304
>gi|300021817|ref|YP_003754428.1| MotA/TolQ/ExbB proton channel [Hyphomicrobium denitrificans ATCC
51888]
gi|299523638|gb|ADJ22107.1| MotA/TolQ/ExbB proton channel [Hyphomicrobium denitrificans ATCC
51888]
Length = 227
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 142 EIENLMDEEIDIILYEKLKPYH----AISHMGESLPAIGIVGAILGIIKAMGNLSQSP-- 195
E+ + ++ + +LK ++ +G + P IG+ G + GI+ + ++QS
Sbjct: 104 EVRDRLEIAMRSATKRQLKGIEQGLPFLATLGSAAPFIGLFGTVWGIMNSFTAIAQSKDT 163
Query: 196 --KILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ +
Sbjct: 164 SLAVVAPGIAEALFATAVGLAAA 186
>gi|238796986|ref|ZP_04640490.1| TonB complex protein [Yersinia mollaretii ATCC 43969]
gi|238719246|gb|EEQ11058.1| TonB complex protein [Yersinia mollaretii ATCC 43969]
Length = 332
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 191 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 250
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 251 QTTNLAVVAPGIAEALLATALGLVAA 276
>gi|184157920|ref|YP_001846259.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|239502203|ref|ZP_04661513.1| biopolymer transport protein [Acinetobacter baumannii AB900]
gi|260555201|ref|ZP_05827422.1| biopolymer transporter [Acinetobacter baumannii ATCC 19606]
gi|332872757|ref|ZP_08440723.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
gi|183209514|gb|ACC56912.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|193077188|gb|ABO11980.2| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii ATCC 17978]
gi|260411743|gb|EEX05040.1| biopolymer transporter [Acinetobacter baumannii ATCC 19606]
gi|322508239|gb|ADX03693.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii 1656-2]
gi|323517865|gb|ADX92246.1| biopolymer transport protein [Acinetobacter baumannii TCDC-AB0715]
gi|332739054|gb|EGJ69915.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
Length = 211
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 148 PGISKALITTAVGMLIA 164
>gi|126641598|ref|YP_001084582.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii ATCC 17978]
Length = 168
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 45 RAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMI 104
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 105 PGISKALITTAVGMLIA 121
>gi|291287516|ref|YP_003504332.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884676|gb|ADD68376.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 198
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 168 MGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ + P G+ G + G+I +S +P+ + + I V+L T G++++
Sbjct: 112 LASAAPLFGLFGTVSGMIDTFNVISYYGTGNPRAMASGISVALVTTQAGLVVA 164
>gi|147840237|emb|CAN70689.1| hypothetical protein VITISV_012155 [Vitis vinifera]
Length = 1199
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 10/129 (7%)
Query: 66 GYKALGQDTYCDVLKLLYILMYNLKKGSRNET-----ENHIDDPYNSTIFTSIPTVLENN 120
+ + DV++ + K G E I NS+IF P+
Sbjct: 991 KSGVFDAERFIDVMQAFEDFITAAKSGGGENMNGGMAELGILQSQNSSIFPGFPSSTSQL 1050
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEE---IDIILYEKLKPYHAISHMGESLPAIGI 177
+ + ++ + E L+DE +D I E+L A+ MG++ P +
Sbjct: 1051 QQPVQTRAALAFLLSDKGN-FFREFLLDEIVKGMDAIAREQLVQIMAVLGMGDAAPVFSM 1109
Query: 178 VGAILGIIK 186
V A G+IK
Sbjct: 1110 VPA-FGLIK 1117
>gi|56460191|ref|YP_155472.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56179201|gb|AAV81923.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 236
Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 31/180 (17%)
Query: 43 GGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHID 102
G ++ KV+K + L+ F + D+ +L + K E H
Sbjct: 32 GWVLIFQRKKVLKQARNDALK-FEDRFWSG---VDLARLYQEISARAKNARGMELLFH-- 85
Query: 103 DPYNSTIFTSIPTVLENNELTT--FICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
F + ++ T + R + V +AR E +D +
Sbjct: 86 -----AGFKEYARLRNHSTTNTQTMLEGAFRAMRVAHARETEK---LDNNL--------- 128
Query: 161 PYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A L + ++ I +L T +G+ +
Sbjct: 129 --GILATIGSISPYIGLFGTVWGIMNAFIALGAVQQATLAMVAPGIAEALIATAMGLFAA 186
>gi|237739471|ref|ZP_04569952.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
gi|229423079|gb|EEO38126.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
Length = 203
Score = 36.8 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIG 203
++ I+ I + + +S + P +G++G + G+I A ++ + IL I
Sbjct: 98 EKAIEQIKH-LERNMWLLSLAANASPLLGLLGTVTGMITAFNSIALNGTGDAGILAKGIS 156
Query: 204 VSLTGTLLGIILS 216
+L T G+ ++
Sbjct: 157 EALYTTAGGLFVA 169
>gi|224024442|ref|ZP_03642808.1| hypothetical protein BACCOPRO_01167 [Bacteroides coprophilus DSM
18228]
gi|224017664|gb|EEF75676.1| hypothetical protein BACCOPRO_01167 [Bacteroides coprophilus DSM
18228]
Length = 200
Score = 36.8 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII 185
I YMR ++ ++ L+ + +I + L ++ MG P +G++G ++ +
Sbjct: 78 IIRYMRQMLETRNSPAHVQRLL-ADYEIKADKDLALSKTLTKMG---PMLGLMGTLIPMG 133
Query: 186 KAMGNLS-QSPKILGTAIGVSLTGTLLGIILS 216
A+ LS + + V+ T++G+ +
Sbjct: 134 PALVGLSTGDISSMAYNMQVAFATTVVGLFAA 165
>gi|48374171|gb|AAT41883.1| putative biopolymer transport protein [Fremyella diplosiphon Fd33]
Length = 217
Score = 36.8 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSP------KILGTAIGVSLTGTLLGIILSY 217
+ P G++G +LG+I + +L+ + + I +L T G+I++
Sbjct: 112 IFDTIIGLSPLFGLLGTVLGLIVSFASLNLGDVGGTKTAGVTSGISEALVSTASGLIVA- 170
Query: 218 SLCNPLTSQIKSTRLKQHRLYI 239
+ + +Q L
Sbjct: 171 IFTLFFANSFRGLAQRQTGLIQ 192
>gi|296090500|emb|CBI40831.3| unnamed protein product [Vitis vinifera]
Length = 885
Score = 36.8 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 66/187 (35%), Gaps = 31/187 (16%)
Query: 29 IQPFEIVIV--AGAGLGGFVMANPLKVIKDSGVS-------------LLEIFGYKALGQ- 72
I P+ +I+ G G ++ NP I D L Y G+
Sbjct: 619 IPPYFALIIRAIGVLEGIALVGNPDFAIVDEAYPYLAQRLLTDESPRLRNALRYTIYGKS 678
Query: 73 -----DTYCDVLKLLYILMYNLKKGSRNET-----ENHIDDPYNSTIFTSIPTVLENNEL 122
+ + DV++ + K G E I NS+IF P+ +
Sbjct: 679 GVFDAERFIDVMQAFEDFITAAKSGGGENMNGGMAELGILQSQNSSIFPGFPSSTSQLQQ 738
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEE---IDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ ++ + E L+DE +D I E+L A+ MG++ P +V
Sbjct: 739 PVQTRAALAFLLSDKGN-FFREFLLDEIVKGMDAIAREQLVQIMAVLGMGDAAPVFSMVP 797
Query: 180 AILGIIK 186
A G+IK
Sbjct: 798 A-FGLIK 803
>gi|254294747|ref|YP_003060770.1| protein TolQ [Hirschia baltica ATCC 49814]
gi|254043278|gb|ACT60073.1| protein TolQ [Hirschia baltica ATCC 49814]
Length = 266
Score = 36.8 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
+ M+ ++ K ++ + S P IG+ G + GI+ A ++ + ++
Sbjct: 148 RSQMNVAVNREAARLEKGLSTLAIISSSAPFIGLFGTVWGIMTAFRDIGMAGETNLAVVA 207
Query: 200 TAIGVSLTGTLLGIILS 216
+ +L T LG++ +
Sbjct: 208 PGMAEALFATALGLLAA 224
>gi|262373119|ref|ZP_06066398.1| TolQ [Acinetobacter junii SH205]
gi|262313144|gb|EEY94229.1| TolQ [Acinetobacter junii SH205]
Length = 232
Score = 36.8 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGII 214
+++ +G P IG+ G + GI+ A + + Q + + I +L T +G+
Sbjct: 127 EVGLGSLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLF 186
Query: 215 LS 216
+
Sbjct: 187 AA 188
>gi|53720548|ref|YP_109534.1| putative transport-related membrane protein [Burkholderia
pseudomallei K96243]
gi|53725687|ref|YP_104002.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|67643541|ref|ZP_00442286.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|76810545|ref|YP_334825.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|121599718|ref|YP_991722.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
SAVP1]
gi|124384087|ref|YP_001027215.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10229]
gi|126450341|ref|YP_001082167.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10247]
gi|126455098|ref|YP_001067689.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1106a]
gi|134280497|ref|ZP_01767208.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|166998534|ref|ZP_02264392.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|167847308|ref|ZP_02472816.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei B7210]
gi|167895897|ref|ZP_02483299.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 7894]
gi|167904282|ref|ZP_02491487.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei NCTC 13177]
gi|167912543|ref|ZP_02499634.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 112]
gi|167920497|ref|ZP_02507588.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei BCC215]
gi|217420858|ref|ZP_03452363.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|237813819|ref|YP_002898270.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|242316904|ref|ZP_04815920.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|254178827|ref|ZP_04885481.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|254190926|ref|ZP_04897432.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|254199076|ref|ZP_04905491.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|254202721|ref|ZP_04909084.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|254208062|ref|ZP_04914412.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|254258328|ref|ZP_04949382.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
gi|254299273|ref|ZP_04966723.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|52210962|emb|CAH36950.1| putative transport-related membrane protein [Burkholderia
pseudomallei K96243]
gi|52429110|gb|AAU49703.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|76579998|gb|ABA49473.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|121228528|gb|ABM51046.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei SAVP1]
gi|124292107|gb|ABN01376.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10229]
gi|126228740|gb|ABN92280.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106a]
gi|126243211|gb|ABO06304.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei NCTC 10247]
gi|134248504|gb|EBA48587.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|147746968|gb|EDK54045.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|147751956|gb|EDK59023.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|157808866|gb|EDO86036.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|157938600|gb|EDO94270.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|160694741|gb|EDP84749.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|169656906|gb|EDS88303.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|217396270|gb|EEC36287.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|237504130|gb|ACQ96448.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|238524909|gb|EEP88339.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|242140143|gb|EES26545.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|243065219|gb|EES47405.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|254217017|gb|EET06401.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
Length = 235
Score = 36.8 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 105 ERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 164
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 165 QIENVAGPVGEALIMTAFGLVVA 187
>gi|209885841|ref|YP_002289698.1| ExbB [Oligotropha carboxidovorans OM5]
gi|209874037|gb|ACI93833.1| ExbB [Oligotropha carboxidovorans OM5]
Length = 308
Score = 36.8 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 86 MYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIEN 145
M K + N S TVL + M IVG+A E
Sbjct: 124 MQKRLKAALRAVSNSRTLAEARMALGSGKTVLSSFLAMAVHELRMSSGIVGDAGIKERAA 183
Query: 146 LMDEEIDIILYEKLK-PYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGT 200
+ E+ +++ ++ +G + P +G+ G + GI+ + +S+ + ++
Sbjct: 184 SLFAEVTRSEARRMRLGMGVLATIGATAPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAP 243
Query: 201 AIGVSLTGTLLGIILS 216
I +L T LG++ +
Sbjct: 244 GIAEALLATALGLVAA 259
>gi|167618681|ref|ZP_02387312.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis Bt4]
Length = 235
Score = 36.8 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 105 ERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 164
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 165 QIENVAGPVGEALIMTAFGLVVA 187
>gi|126662960|ref|ZP_01733958.1| hypothetical protein FBBAL38_06400 [Flavobacteria bacterium BAL38]
gi|126624618|gb|EAZ95308.1| hypothetical protein FBBAL38_06400 [Flavobacteria bacterium BAL38]
Length = 269
Score = 36.8 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLG 212
+ K IS P +G +G ++G+I+A + S P ++ I V+L T+ G
Sbjct: 168 QLEKNVSWISLFIALAPMLGFMGTVIGMIEAFDQIQSAGSMEPSLVAGGIKVALLTTVFG 227
Query: 213 IILS 216
+I++
Sbjct: 228 LIVA 231
>gi|37676578|ref|NP_936974.1| biopolymer transport protein ExbB2 [Vibrio vulnificus YJ016]
gi|37201121|dbj|BAC96944.1| biopolymer transport protein ExbB2 [Vibrio vulnificus YJ016]
Length = 188
Score = 36.8 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSL 206
+D + K I + P +G++G + G+I + S +PK++ + I ++
Sbjct: 90 LDDAHQQLFKHLAFIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSNPKLMASGISLAT 149
Query: 207 TGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVK 242
T+ G++ + +K + ++ +L ++
Sbjct: 150 LPTMAGMVAALVGMFVHARLVKLCQNREVKLEQSLR 185
>gi|163800276|ref|ZP_02194177.1| ExbB-like protein [Vibrio sp. AND4]
gi|159175719|gb|EDP60513.1| ExbB-like protein [Vibrio sp. AND4]
Length = 232
Score = 36.4 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 12/154 (7%)
Query: 103 DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPY 162
DP N+ ++ L + + M + ++S E+ + ++
Sbjct: 55 DPTNNKDIEALADELSDKRPLLYRGVAMLLAHHSFSKSLR-EDAAGIWLQEKRHQLHSGL 113
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILSY 217
++ +G P IG++G +LG+I ++ S P L +G+++ T G+I++
Sbjct: 114 RLLTLIGVISPLIGLLGTVLGLIDMFKGIASSTGNITPNDLADGLGLAMRTTAAGLIIAL 173
Query: 218 S------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
L ++ + + + +
Sbjct: 174 PAISGAQLIGLWADRVIAKLEHTLNYVNLWLEGI 207
>gi|118579677|ref|YP_900927.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118502387|gb|ABK98869.1| outer membrane transport energization protein ExbB [Pelobacter
propionicus DSM 2379]
Length = 147
Score = 36.4 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGV 204
E + E + H I+ +G + P +G++G ++GI+ + + + +
Sbjct: 43 REKRALELELTRKLHVIATIGSNAPYLGLLGTVMGIMLTFHTMGTEGFMDTNKIMVGLAL 102
Query: 205 SLTGTLLGIILS 216
+L T +G+ ++
Sbjct: 103 ALKATAVGLFVA 114
>gi|257459078|ref|ZP_05624197.1| ExbB\TolQ family transport protein [Campylobacter gracilis RM3268]
gi|257443463|gb|EEV18587.1| ExbB\TolQ family transport protein [Campylobacter gracilis RM3268]
Length = 191
Score = 36.4 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS---PKILGT 200
+ ++ + +S + + P IG+ G ++ I+ L +
Sbjct: 78 KEALEIYKGKAERDSTSGLTWLSIVASTSPFIGLFGTVVSILHTFSKLGGGNSGIDTIAP 137
Query: 201 AIGVSLTGTLLGIILS 216
AI +L T GI ++
Sbjct: 138 AISEALVATGCGIFVA 153
>gi|261415311|ref|YP_003248994.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371767|gb|ACX74512.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325879|gb|ADL25080.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 234
Score = 36.4 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
E + M + + + H +S M + P +G++G + G++ + +Q+P +
Sbjct: 113 EFRDYMQVRMMKSVRYMEQGNHIVSVMAAAAPLLGLLGTVTGMVSTFEVITLYGNQNPVL 172
Query: 198 LGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLY 238
+ I +L T G+++++ L +K ++ +
Sbjct: 173 MADGISEALISTQSGLLIAFPLTL-----MKQRLDERIEIL 208
>gi|294054892|ref|YP_003548550.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293614225|gb|ADE54380.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 189
Score = 36.4 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLL 211
+ + + + P +G++G + G+ + G S P + T I ++L T+L
Sbjct: 89 RMERGVFLLEIVVGAAPLLGLLGTVTGLTQVFGGFSAETGLPDPAVFITGIALALNTTIL 148
Query: 212 GIILS 216
G+ ++
Sbjct: 149 GLAVA 153
>gi|169796151|ref|YP_001713944.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii AYE]
gi|215483605|ref|YP_002325826.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
gi|301345168|ref|ZP_07225909.1| biopolymer transport protein ExbB [Acinetobacter baumannii AB056]
gi|301511294|ref|ZP_07236531.1| biopolymer transport protein ExbB [Acinetobacter baumannii AB058]
gi|301595464|ref|ZP_07240472.1| biopolymer transport protein ExbB [Acinetobacter baumannii AB059]
gi|169149078|emb|CAM86955.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii AYE]
gi|213985798|gb|ACJ56097.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
Length = 211
Score = 36.4 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 148 PGISKALITTAVGMLIA 164
>gi|116617391|ref|YP_817762.1| cell division membrane protein [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096238|gb|ABJ61389.1| cell division membrane protein [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 404
Score = 36.4 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
+G + + I GG + G + ++ P VI+ GA +G ++ VI +G ++L
Sbjct: 179 LGTLLVFVAIFGGVALVSGVTWRILAP---VIILGATVGTTLL---TLVISSAGRTILSK 232
Query: 65 FGYKAL 70
G+++
Sbjct: 233 LGFQSY 238
>gi|260550093|ref|ZP_05824307.1| biopolymer transporter [Acinetobacter sp. RUH2624]
gi|260406848|gb|EEX00327.1| biopolymer transporter [Acinetobacter sp. RUH2624]
Length = 211
Score = 36.4 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G++++
Sbjct: 148 PGISKALITTAVGMLIA 164
>gi|225849976|ref|YP_002730210.1| biopolymer transport protein ExbB [Persephonella marina EX-H1]
gi|225644778|gb|ACO02964.1| biopolymer transport protein ExbB [Persephonella marina EX-H1]
Length = 154
Score = 36.4 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILG 199
EN++D E + K ++ G + P IG+ G +LGIIKA +L S + ++
Sbjct: 45 ENMLDYEPLELKLALEKRLGILATFGNNAPFIGLFGTVLGIIKAFHDLGTSTEFGVRVVM 104
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 105 QGISEALVATAMGLFVA 121
>gi|269962824|ref|ZP_06177164.1| TonB system transport protein ExbB1 [Vibrio harveyi 1DA3]
gi|269832378|gb|EEZ86497.1| TonB system transport protein ExbB1 [Vibrio harveyi 1DA3]
Length = 232
Score = 36.4 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTL 210
++ ++ +G P IG++G +LG+I ++ S P L +G+++ T
Sbjct: 107 HQLHSGLRLLTLIGVISPLIGLLGTVLGLIDMFKGIASSTGNITPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
G+I++ L ++ + + + +
Sbjct: 167 AGLIIALPAISGAQLIGLWADRVIAKLEHTLNYVNLWLEGI 207
>gi|56478316|ref|YP_159905.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
gi|56314359|emb|CAI09004.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
Length = 202
Score = 36.4 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 115 TVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPA 174
V ++ L + +R + ++ ++E ++ +E + + + P
Sbjct: 63 RVAAHSPLGKVLAAGLRNVTSSRD---VMKEAIEESGRVVAHELERFLTTLGTIAAISPL 119
Query: 175 IGIVGAILGIIKAMGN---LSQSPKILGTAIGVSLTGTLLGIILS 216
+G+ G I+G+I + +P+ L I +L T LG+I++
Sbjct: 120 MGLFGTIVGMIDIFASQSAAGTNPQQLAQGISTALNSTGLGLIIA 164
>gi|254180641|ref|ZP_04887239.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|184211180|gb|EDU08223.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
Length = 235
Score = 36.4 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 105 ERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 164
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 165 QIENVAGPVGEALIMTAFGLVVA 187
>gi|329848727|ref|ZP_08263755.1| protein TolQ [Asticcacaulis biprosthecum C19]
gi|328843790|gb|EGF93359.1| protein TolQ [Asticcacaulis biprosthecum C19]
Length = 234
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 39/106 (36%), Gaps = 14/106 (13%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+++ M + ++ + + P +G+ G + GI+ A + +
Sbjct: 114 QVDREMSHIVTSEADSVEDGLSILAVIATATPFLGLFGTVWGIMNAFSAIAAQGDTNLAT 173
Query: 198 LGTAIGVSLTGTLLGIILS----------YSLCNPLTSQIKSTRLK 233
+ AI +L T +G+ + + + S+++S +
Sbjct: 174 VAPAISEALFATAMGLFAAIPAYVAFNLFNAKVSRFASRMESFADE 219
>gi|237756443|ref|ZP_04584981.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691391|gb|EEP60461.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 147
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLGIILS 216
++ G + P IG+ G +LGIIKA +LS S + ++ I +L T +G+ ++
Sbjct: 65 ILATFGNNAPFIGLFGTVLGIIKAFHSLSTSTEFGVRVVMAGISEALVATAMGLFVA 121
>gi|119505773|ref|ZP_01627841.1| MotA/TolQ/ExbB proton channel [marine gamma proteobacterium
HTCC2080]
gi|119458407|gb|EAW39514.1| MotA/TolQ/ExbB proton channel [marine gamma proteobacterium
HTCC2080]
Length = 207
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 132 MIIVGNARSYEIENLMDEEIDIIL----YEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
++ G A + ++M E I ++ + + + + P +G++G ++G+I+
Sbjct: 73 ILAAGLANRSQGRDVMKESIQEAAGHVVHDLERYLNTLGTVAAVAPLLGLLGTVVGMIRV 132
Query: 188 MGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + + L I +L T G++++
Sbjct: 133 FTEITVQGTGNANALAGGISEALITTAAGLVVA 165
>gi|332188251|ref|ZP_08389979.1| protein TolQ [Sphingomonas sp. S17]
gi|332011750|gb|EGI53827.1| protein TolQ [Sphingomonas sp. S17]
Length = 219
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P +G+ G + GI+++ ++Q S ++ I +L T +G+ +
Sbjct: 123 VLATVGSVAPFVGLFGTVWGIMRSFTGIAQAQNSSLAVVAPGIAEALFATAIGLFAA 179
>gi|311278071|ref|YP_003940302.1| tonB-system energizer ExbB [Enterobacter cloacae SCF1]
gi|308747266|gb|ADO47018.1| tonB-system energizer ExbB [Enterobacter cloacae SCF1]
Length = 243
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + + ++ +G P +G+ G + GI+ + ++Q + ++ I
Sbjct: 115 LERRVAAVGRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGI 174
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 175 AEALLATAIGLFAA 188
>gi|292493723|ref|YP_003529162.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582318|gb|ADE16775.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 174
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 139 RSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQS 194
++ I M E+ L + L P ++ + LP +G++G ++G+I+ + + +
Sbjct: 68 QAQRIREGMIAELSQNLRKFLLPIKTLTAV---LPMLGLLGTVIGMIQVFDVMTVFGTGN 124
Query: 195 PKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHR 236
+ I V+L T+ G++ + ++ ++ + +
Sbjct: 125 VRGFAGGISVALITTMAGLVTA-LSGLYFSANLEHRAQRAIQ 165
>gi|327404527|ref|YP_004345365.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
gi|327320035|gb|AEA44527.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
Length = 251
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTA 201
EIE+ MD+ +I + + K + + P G +G I G+IK N+S S +
Sbjct: 134 EIESNMDKVANIEIGKMEKGMGVLGLIAGIAPTFGFIGTIAGVIKIFYNISISENVSIGN 193
Query: 202 IGVSL 206
I L
Sbjct: 194 ISGGL 198
>gi|261416283|ref|YP_003249966.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372739|gb|ACX75484.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327438|gb|ADL26639.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 212
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 56/170 (32%), Gaps = 10/170 (5%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
L+ + +M KG + + + ++ + + D + +
Sbjct: 33 LERMTYIMIKSSKGRGKFMADFGKLVMQNQLEQALQFAKSSKLPIAKVMDAIVGAKLNCK 92
Query: 139 RSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS 194
+ + ++M D + IS M +G++G I G+I ++
Sbjct: 93 DADKARDMMTAASDAVFLTEAPRLTRYISIISVMASISTLLGLMGTIYGLIYTFDAVANK 152
Query: 195 PK-----ILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
P L I +++ TLLG++ + L + + + +
Sbjct: 153 PASERAKALADGIAIAMGTTLLGLLSAVPLLV-IVGLLNMNSERLIQEME 201
>gi|167578827|ref|ZP_02371701.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia thailandensis TXDOH]
Length = 242
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQGG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|37520710|ref|NP_924087.1| tolQ-type transport protein [Gloeobacter violaceus PCC 7421]
gi|35211705|dbj|BAC89082.1| gll1141 [Gloeobacter violaceus PCC 7421]
Length = 220
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 128 DYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
D +R++ V + E D I++ + + K + + +G P IG++G ++GI+++
Sbjct: 82 DGVRLLSV---PRVKFEQAFDITINLGMRKFEKHLNVLGTIGAVAPFIGLLGTVVGILRS 138
Query: 188 MGNLSQSPK---ILGTAIGVSLTGTLLGIILS 216
+ L IG +L T G+I++
Sbjct: 139 FQTFAGEGATSNKLAAEIGFALIATAAGLIVA 170
>gi|238762418|ref|ZP_04623389.1| TonB complex protein [Yersinia kristensenii ATCC 33638]
gi|238699403|gb|EEP92149.1| TonB complex protein [Yersinia kristensenii ATCC 33638]
Length = 332
Score = 36.4 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 191 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 250
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 251 QTTNLAVVAPGIAEALLATALGLVAA 276
>gi|221134417|ref|ZP_03560722.1| tolQ protein [Glaciecola sp. HTCC2999]
Length = 222
Score = 36.4 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + E ++ +G P IG+ G + GI+ A L Q + ++ I
Sbjct: 111 MRVALSREVDELESKLPFLATVGSISPYIGLFGTVWGIMNAFIALGQVQQATLAMVAPGI 170
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 171 AEALIATAIGLFAA 184
>gi|90426011|ref|YP_534381.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90108025|gb|ABD90062.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 301
Score = 36.4 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ +L + ++ +G P +G+ G + GI+ A +S+ +
Sbjct: 173 ERVGSLFSRIEAGAARRMTRGTGILATIGSIGPFVGLFGTVWGIMNAFIGISKSQTTNLA 232
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T LG++ +
Sbjct: 233 VVAPGIAEALLATALGLVAA 252
>gi|85058259|ref|YP_453961.1| biopolymer transport protein ExbB [Sodalis glossinidius str.
'morsitans']
gi|84778779|dbj|BAE73556.1| biopolymer transport protein [Sodalis glossinidius str.
'morsitans']
Length = 253
Score = 36.4 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 35/88 (39%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+ N + ++ + + K ++ +G P IG+ G + GI+ + +
Sbjct: 110 LSDNNGIKERVAFRLERRVAGVSRAMGKGNGFLATIGAISPFIGLFGTVWGIMNSFIGIA 169
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T +G+ +
Sbjct: 170 HTQTTNLAVVAPGIAEALLATAIGLFAA 197
>gi|330722473|gb|EGH00304.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC2047]
Length = 212
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIIL----YEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
+++ G + S ++M E I + ++ + + + + P +G++G ++G+IK
Sbjct: 72 KILAAGLSNSKYGRDIMKESIQEVASHVIHDMERYLNTLGTIAVITPLLGLLGTVIGMIK 131
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + + +L I +L T G+ ++
Sbjct: 132 VFTAIMIQGTGNANVLAGGISEALITTAAGLTVA 165
>gi|296448309|ref|ZP_06890201.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296254186|gb|EFH01321.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 224
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 165 ISHMGESLPAIGIVGAILGII---KAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCN 221
+ + P +G++G I+G+ + +G SP + + +L T G+ ++
Sbjct: 116 LDTIVTLAPLLGLLGTIIGMFNSFQVLGKPGSSPTDITAGVAEALVATAAGLFIAIVGVF 175
Query: 222 PLTSQIKSTRLKQHRLYIIVKKALI 246
+ +++ +K L+
Sbjct: 176 -FFNGLQTRVRLHVHQLETLKMVLV 199
>gi|206891066|ref|YP_002248792.1| TolQ protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743004|gb|ACI22061.1| TolQ protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 209
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGII------ 214
++ G + P IG+ G + GI+ A ++ S S + I +L T G+
Sbjct: 119 LATTGSTTPFIGLFGTVWGIMDAFRSIGIKGSASIATVAPGIAEALITTAAGLFAAIPAV 178
Query: 215 LSYSLCNPLTSQI 227
++Y+ ++I
Sbjct: 179 IAYNYFTSQANKI 191
>gi|148555051|ref|YP_001262633.1| Tol-Pal system, TolQ [Sphingomonas wittichii RW1]
gi|148500241|gb|ABQ68495.1| Tol-Pal system, TolQ [Sphingomonas wittichii RW1]
Length = 232
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSL 219
++ +G P +G+ G + GI+++ ++ + S ++ I +L T LG+ +
Sbjct: 137 ILATVGSVAPFVGLFGTVWGIMRSFTDIAASQNTSLGVVAPGIAEALFATALGLFAAIPA 196
Query: 220 CNPLTSQIKSTRLKQHRLYI 239
+ + +L+
Sbjct: 197 VIAYNRLLHRVSKIEGQLHR 216
>gi|302381974|ref|YP_003817797.1| protein TolQ [Brevundimonas subvibrioides ATCC 15264]
gi|302192602|gb|ADL00174.1| protein TolQ [Brevundimonas subvibrioides ATCC 15264]
Length = 255
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
GN I+ +D I + +S + + P IG+ G + GI+ A G +
Sbjct: 108 DTQGNLLVSRIDRALDSLIAREGQRIEEGLGVLSVVATASPFIGLFGTVWGIMNAFGRIA 167
Query: 192 ---SQSPKILGTAIGVSLTGTLLGI 213
+ + + AI +L T +G+
Sbjct: 168 AAGNTNLTTVAPAIAEALFATAVGL 192
>gi|196228133|ref|ZP_03127000.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196227536|gb|EDY22039.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 316
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI--- 197
+ + + E ++ +G P IG++G ++GII + G+L+
Sbjct: 184 EVVREIAETEAASQAASLQHRTVYLADIGMLAPMIGLLGTVIGIISSFGDLAHKDASQSR 243
Query: 198 ---LGTAIGVSLTGTLLGIILS 216
L + +L T G++L
Sbjct: 244 DMLLAGGVSQALVATASGLVLG 265
>gi|71280088|ref|YP_270421.1| biopolymer transport exbB protein [Colwellia psychrerythraea 34H]
gi|71145828|gb|AAZ26301.1| biopolymer transport exbB protein [Colwellia psychrerythraea 34H]
Length = 174
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SP 195
++ I E D +L +++ + M P IG++G + G+I +++ +P
Sbjct: 69 AHRIRETWISEADELLEQRMITIRTLVAM---CPLIGLLGTVTGMIGVFEVMAEQGTGNP 125
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRL 232
+++ I + T+ G++ + S +S++ +
Sbjct: 126 RLMAAGISQATIPTMAGMVAALSGVF-FSSRLDAKVK 161
>gi|83716181|ref|YP_440218.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
gi|83650006|gb|ABC34070.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
Length = 233
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 69 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQGG 121
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 122 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 180
>gi|90423486|ref|YP_531856.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90105500|gb|ABD87537.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 288
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 135 VGNARSYEIENLMDEEIDIILYEK----LKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
+ + ++ + + I E + ++ +G + P IG+ G + GI+ +
Sbjct: 140 SNDLSAEGVKERLAIALSRIEAEAGRDMARGTGLLATIGATAPFIGLFGTVWGIMNSFVG 199
Query: 191 LSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 200 IAQTKTTNLAVVAPGIAEALLATAIGLVAA 229
>gi|163746897|ref|ZP_02154254.1| biopolymer transport protein [Oceanibulbus indolifex HEL-45]
gi|161380011|gb|EDQ04423.1| biopolymer transport protein [Oceanibulbus indolifex HEL-45]
Length = 277
Score = 36.4 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLL 211
++ +G + P +G+ G + GI+ + ++S+ + I+ I +L T +
Sbjct: 152 RRMGHGAGVLAIVGSTAPFVGLFGTVWGIMNSFISISESNTTNLAIVAPGIAEALLATAI 211
Query: 212 GIILS 216
G++ +
Sbjct: 212 GLVAA 216
>gi|239906027|ref|YP_002952766.1| putative protein TolQ [Desulfovibrio magneticus RS-1]
gi|239795891|dbj|BAH74880.1| putative protein TolQ [Desulfovibrio magneticus RS-1]
Length = 255
Score = 36.4 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKIL 198
I ++ + + + L + K ++ + P IG+ G + GI+ + ++ S + +
Sbjct: 113 IRRVLRQGVSMELAKLSKNLAFLATTANATPFIGLFGTVWGIMNSFHSIGLQQSAALAAV 172
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 173 APGISEALVATAIGLAVA 190
>gi|167616913|ref|ZP_02385544.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia thailandensis Bt4]
gi|257140844|ref|ZP_05589106.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
Length = 241
Score = 36.4 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 77 DNPFLALALSGKEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQGG 129
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 130 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 188
>gi|332534225|ref|ZP_08410070.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis ANT/505]
gi|332036305|gb|EGI72776.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis ANT/505]
Length = 234
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + + ++ +G P IG+ G + GI+ A L + + +++ I
Sbjct: 113 MRVALSREIEKMESSLSFLATVGSISPYIGLFGTVWGIMNAFIALGEVKQATLQMVAPGI 172
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 173 AEALIATAMGLFAA 186
>gi|237746668|ref|ZP_04577148.1| TolQ protein [Oxalobacter formigenes HOxBLS]
gi|229378019|gb|EEO28110.1| TolQ protein [Oxalobacter formigenes HOxBLS]
Length = 229
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ E+D + ++ +G P +G+ G + GI+ A L+ + +
Sbjct: 120 MRAAYQREMDSLESHL----AFLASVGSVSPYVGLFGTVWGIMNAFRGLANVHQATLATV 175
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 176 APGIAEALIATAIGLFAA 193
>gi|126442171|ref|YP_001060428.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 668]
gi|126221664|gb|ABN85170.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 668]
Length = 235
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 105 ERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 164
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +LT T G++++
Sbjct: 165 QIENVAGPVGEALTMTAFGLVVA 187
>gi|257469132|ref|ZP_05633226.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|317063379|ref|ZP_07927864.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|313689055|gb|EFS25890.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
Length = 203
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMG 189
++ + +E E + K +S + P +G++G + G+IKA
Sbjct: 79 IQYYKSNSKDPVMLEEKGKESAMAQVPLLEKHMWMLSLVAHITPLLGLLGTVTGMIKAFQ 138
Query: 190 NLS----QSPKILGTAIGVSLTGTLLGIILS 216
+S +L I +L T G+ ++
Sbjct: 139 AVSVHGTGDASVLAKGISEALFTTAGGLFVA 169
>gi|294651069|ref|ZP_06728407.1| TonB family auxiliary protein TolQ [Acinetobacter haemolyticus ATCC
19194]
gi|292823048|gb|EFF81913.1| TonB family auxiliary protein TolQ [Acinetobacter haemolyticus ATCC
19194]
Length = 232
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A + + Q + + I +L T +G+ +
Sbjct: 132 VLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAA 188
>gi|241759355|ref|ZP_04757461.1| conserved hypothetical protein [Neisseria flavescens SK114]
gi|241320491|gb|EER56788.1| conserved hypothetical protein [Neisseria flavescens SK114]
Length = 620
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 79/250 (31%), Gaps = 37/250 (14%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M ++ G ++ L I G F +P LI +I ++ ++ S
Sbjct: 136 MISLNGFIVSALMISGAFIFS-SSPEFLIPASTFMI----TAAASIV---FALLSASPER 187
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
+ ++ + +D + + + + S P +L
Sbjct: 188 IGKMQAARTWLKDFV-------------RGRSKLRDLKTRLSSTETRFFGGSQPNILIYE 234
Query: 121 ELTTFICD-YMRMIIVGNARSYEIENLMDEEID--IILYEKLKPYHAISHMGESLPAIGI 177
+ D Y M+ +I M + + +L +K Y +S+ +
Sbjct: 235 DRVKLQKDQYWEMMQEIMGDRKQIYEKMSDHLYWLGLLADKQFKYINLSYAVFRWGLLAS 294
Query: 178 VGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLT------SQIKSTR 231
+ A +G +K + +L SP + LGI + + P ++
Sbjct: 295 LAAFIG-VKTLPSLLTSPANNAAELRS------LGINMFNGVFEPSAVQQLPDGKLLIAE 347
Query: 232 LKQHRLYIIV 241
+ + + I+
Sbjct: 348 DEPNHAFSII 357
>gi|329113833|ref|ZP_08242604.1| Protein TolQ [Acetobacter pomorum DM001]
gi|326696843|gb|EGE48513.1| Protein TolQ [Acetobacter pomorum DM001]
Length = 246
Score = 36.4 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
++ + I + + ++ + P +G+ G + GI+ + ++ + +
Sbjct: 127 ERVDRAIGITITREMDRLRRWVIFLATVAPVAPFVGLFGTVWGIMHSFSSIAAEHNTNLS 186
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 187 VVAPGISEALFATAIGLLTA 206
>gi|53725622|ref|YP_103657.1| tolQ protein [Burkholderia mallei ATCC 23344]
gi|67643923|ref|ZP_00442666.1| protein TolQ [Burkholderia mallei GB8 horse 4]
gi|121600116|ref|YP_992170.1| tolQ protein [Burkholderia mallei SAVP1]
gi|124383938|ref|YP_001028616.1| tolQ protein [Burkholderia mallei NCTC 10229]
gi|126441853|ref|YP_001060212.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 668]
gi|126448943|ref|YP_001081483.1| tolQ protein [Burkholderia mallei NCTC 10247]
gi|126452711|ref|YP_001067476.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1106a]
gi|166998273|ref|ZP_02264133.1| protein TolQ [Burkholderia mallei PRL-20]
gi|167720987|ref|ZP_02404223.1| tolQ protein [Burkholderia pseudomallei DM98]
gi|167739944|ref|ZP_02412718.1| tolQ protein [Burkholderia pseudomallei 14]
gi|167817181|ref|ZP_02448861.1| tolQ protein [Burkholderia pseudomallei 91]
gi|167825594|ref|ZP_02457065.1| tolQ protein [Burkholderia pseudomallei 9]
gi|167847078|ref|ZP_02472586.1| tolQ protein [Burkholderia pseudomallei B7210]
gi|167895662|ref|ZP_02483064.1| tolQ protein [Burkholderia pseudomallei 7894]
gi|167904055|ref|ZP_02491260.1| tolQ protein [Burkholderia pseudomallei NCTC 13177]
gi|167912312|ref|ZP_02499403.1| tolQ protein [Burkholderia pseudomallei 112]
gi|167920269|ref|ZP_02507360.1| tolQ protein [Burkholderia pseudomallei BCC215]
gi|226194311|ref|ZP_03789910.1| protein TolQ [Burkholderia pseudomallei Pakistan 9]
gi|237813602|ref|YP_002898053.1| protein TolQ [Burkholderia pseudomallei MSHR346]
gi|242314143|ref|ZP_04813159.1| protein TolQ [Burkholderia pseudomallei 1106b]
gi|254175704|ref|ZP_04882364.1| tolQ protein [Burkholderia mallei ATCC 10399]
gi|254180827|ref|ZP_04887425.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|254191665|ref|ZP_04898168.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|254194925|ref|ZP_04901355.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|254202354|ref|ZP_04908717.1| protein TolQ [Burkholderia mallei FMH]
gi|254207688|ref|ZP_04914038.1| protein TolQ [Burkholderia mallei JHU]
gi|254260751|ref|ZP_04951805.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
gi|254299062|ref|ZP_04966512.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|254356410|ref|ZP_04972686.1| protein TolQ [Burkholderia mallei 2002721280]
gi|52429045|gb|AAU49638.1| tolQ protein [Burkholderia mallei ATCC 23344]
gi|121228926|gb|ABM51444.1| tolQ protein [Burkholderia mallei SAVP1]
gi|124291958|gb|ABN01227.1| protein TolQ [Burkholderia mallei NCTC 10229]
gi|126221346|gb|ABN84852.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 668]
gi|126226353|gb|ABN89893.1| protein TolQ [Burkholderia pseudomallei 1106a]
gi|126241813|gb|ABO04906.1| protein TolQ [Burkholderia mallei NCTC 10247]
gi|147746601|gb|EDK53678.1| protein TolQ [Burkholderia mallei FMH]
gi|147751582|gb|EDK58649.1| protein TolQ [Burkholderia mallei JHU]
gi|148025407|gb|EDK83561.1| protein TolQ [Burkholderia mallei 2002721280]
gi|157808950|gb|EDO86120.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|157939336|gb|EDO95006.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|160696748|gb|EDP86718.1| tolQ protein [Burkholderia mallei ATCC 10399]
gi|169651674|gb|EDS84367.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|184211366|gb|EDU08409.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|225933776|gb|EEH29764.1| protein TolQ [Burkholderia pseudomallei Pakistan 9]
gi|237504440|gb|ACQ96758.1| protein TolQ [Burkholderia pseudomallei MSHR346]
gi|238525392|gb|EEP88820.1| protein TolQ [Burkholderia mallei GB8 horse 4]
gi|242137382|gb|EES23784.1| protein TolQ [Burkholderia pseudomallei 1106b]
gi|243065353|gb|EES47539.1| protein TolQ [Burkholderia mallei PRL-20]
gi|254219440|gb|EET08824.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
Length = 225
Score = 36.4 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 47/174 (27%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + L MR +++ + ++
Sbjct: 92 EFLKAKEKRLSDPALLLDGARRAMRASFQREMD------VLESNL-----------SFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|304309957|ref|YP_003809555.1| Hydrophobe/amphiphile efflux-1 HAE1 precursor [gamma
proteobacterium HdN1]
gi|301795690|emb|CBL43889.1| Hydrophobe/amphiphile efflux-1 HAE1 precursor [gamma
proteobacterium HdN1]
Length = 1047
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 19/49 (38%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMAN 49
+ IIG+ + + + GG+ + Q F + +V G +
Sbjct: 440 IGAIIGITVILCSVFLPMAFFGGSVGAIYQQFSVTLVLTMGFSALMAMT 488
>gi|258543666|ref|YP_003189099.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256634744|dbj|BAI00720.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256637800|dbj|BAI03769.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256640854|dbj|BAI06816.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256643909|dbj|BAI09864.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256646964|dbj|BAI12912.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256650017|dbj|BAI15958.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256653007|dbj|BAI18941.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256656061|dbj|BAI21988.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 246
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
++ + I + + ++ + P +G+ G + GI+ + ++ + +
Sbjct: 127 ERVDRAIGITITREMDRLRRWVIFLATVAPVAPFVGLFGTVWGIMHSFSSIAAEHNTNLS 186
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G++ +
Sbjct: 187 VVAPGISEALFATAIGLLTA 206
>gi|268680683|ref|YP_003305114.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
gi|268618714|gb|ACZ13079.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
Length = 148
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ G + P IG+ G +LGII+A + + + I +L T G+ ++
Sbjct: 64 ILATFGNNAPFIGLFGTVLGIIQAFHAIGSNNAFDVQPIMQGISEALIATATGLFVA 120
>gi|198284047|ref|YP_002220368.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218668040|ref|YP_002426695.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248568|gb|ACH84161.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520253|gb|ACK80839.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 225
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKA---MGNLSQSPKILGTAIGVSLTGTLLGIILS---Y 217
+ + P +G++G I+G+ A + N +Q+P ++ ++ +L T G+I++
Sbjct: 114 ILDTIVTLAPLLGLLGTIIGMFHAFQVLNNAAQNPTLITGSVAEALLATAAGLIIAIVGL 173
Query: 218 SLCNPLTSQIKSTRLKQHRLYIIVK 242
N L ++++ + L ++
Sbjct: 174 VAFNGLHNRMRYVVHQMETLRTMLI 198
>gi|167571243|ref|ZP_02364117.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia oklahomensis C6786]
Length = 132
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 6 ERGERVLRALRHALRTSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 65
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 66 QIENVAGPVGEALIMTAFGLVVA 88
>gi|149193989|ref|ZP_01871087.1| exbb\tolq family transport protein [Caminibacter mediatlanticus
TB-2]
gi|149135942|gb|EDM24420.1| exbb\tolq family transport protein [Caminibacter mediatlanticus
TB-2]
Length = 182
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ--SPKILGTAIGVSLTGTLLGIILS 216
+S + + P IG+ G ++GI+ A + + ++ AI +L T +GII++
Sbjct: 98 LSIVASTAPFIGLFGTVVGILNAFAGMQSVTTINMIAPAIADALIATAIGIIVA 151
>gi|83592427|ref|YP_426179.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83575341|gb|ABC21892.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 308
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
+ +E +M + L + ++ G P +G+ G + GI+ + + S
Sbjct: 188 AQRVERVMGITQNRELETLERRLGFLASTGAVAPFVGLFGTVWGIMNSFHAIGMSNDTSL 247
Query: 196 KILGTAIGVSLTGTLLGIILS 216
+ I +L T LG++ +
Sbjct: 248 ATVAPGIAEALFATALGLVAA 268
>gi|329113725|ref|ZP_08242500.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
gi|326696988|gb|EGE48654.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
Length = 249
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAI 202
++ ++ ++ +G + P IG+ G + GI+ + ++ S ++ I
Sbjct: 112 LERLEAAEGRRLMRGTGLLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGI 171
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 172 AEALLATALGLVAA 185
>gi|254787623|ref|YP_003075052.1| ATPase [Teredinibacter turnerae T7901]
gi|237685803|gb|ACR13067.1| ATPase [Teredinibacter turnerae T7901]
Length = 245
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-SPKI-- 197
E+E M+E + + K ++ + +G++G I+G+I A ++ P
Sbjct: 115 EEVEFAMEEGVMEAVPRLEKRTPYLATLANIATLLGLLGTIMGLIAAFTAVANADPAEKA 174
Query: 198 --LGTAIGVSLTGTLLGIILSYSLCN 221
L +I V++ T G++ + L
Sbjct: 175 NLLSQSISVAMNTTAFGLMSAIPLLL 200
>gi|170701070|ref|ZP_02892047.1| protein TolQ [Burkholderia ambifaria IOP40-10]
gi|171322374|ref|ZP_02911195.1| protein TolQ [Burkholderia ambifaria MEX-5]
gi|172059757|ref|YP_001807409.1| protein TolQ [Burkholderia ambifaria MC40-6]
gi|170134010|gb|EDT02361.1| protein TolQ [Burkholderia ambifaria IOP40-10]
gi|171092302|gb|EDT37674.1| protein TolQ [Burkholderia ambifaria MEX-5]
gi|171992274|gb|ACB63193.1| protein TolQ [Burkholderia ambifaria MC40-6]
Length = 225
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 44/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 92 EFLKAKEKRLTDPGLVLDGARRAMRASFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|94967626|ref|YP_589674.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
gi|94549676|gb|ABF39600.1| Cell division and transport-associated protein TolQ [Candidatus
Koribacter versatilis Ellin345]
Length = 235
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK 196
N S + + ++ E+ P+ ++ G P IG+ G + GII A L +
Sbjct: 104 NVTSIQRSTQIAASEELTRLERRLPW--LATTGAVTPFIGLFGTVWGIIDAFHGLGDAGA 161
Query: 197 ----ILGTAIGVSLTGTLLGIILS 216
+ I +L T G+ +
Sbjct: 162 ATLRAVAPGISEALITTAAGLFAA 185
>gi|120437235|ref|YP_862921.1| MotA/TolQ/ExbB family biopolymer transport protein [Gramella
forsetii KT0803]
gi|117579385|emb|CAL67854.1| MotA/TolQ/ExbB family biopolymer transport protein [Gramella
forsetii KT0803]
Length = 233
Score = 36.4 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----- 195
+I ++ + +Y+ K ++ + + P IG +G ++G++ A L+ S
Sbjct: 117 EDINTAIENAGRLEVYKLEKNVSILATIAGAAPMIGFLGTVIGMVLAFHELATSSGQAQM 176
Query: 196 KILGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 177 GALAEGIYTAMTTTVAGLIVG 197
>gi|332667284|ref|YP_004450072.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
gi|332336098|gb|AEE53199.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
Length = 231
Score = 36.4 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKI 197
+I+ ++ +I +++ K ++ + + P +G +G + G+I A +S +P +
Sbjct: 116 DIDAAIENVGNIEIFKLEKNLANLASIAGAAPMLGFLGTVTGMILAFYQMSTAESITPSL 175
Query: 198 LGTAIGVSLTGTLLGIILS 216
L I +L T G+ +
Sbjct: 176 LAGGIYQALLTTAFGLGVG 194
>gi|156932496|ref|YP_001436412.1| biopolymer transport protein ExbB [Cronobacter sakazakii ATCC
BAA-894]
gi|156530750|gb|ABU75576.1| hypothetical protein ESA_00276 [Cronobacter sakazakii ATCC BAA-894]
Length = 239
Score = 36.4 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R + G+ + I+ ++ + + ++ +G P +G+ G + GI+
Sbjct: 90 RELSAGSEDNEGIKERTGFRLERRVAAAGRHMGRGNGYLATIGAISPFVGLFGTVWGIMN 149
Query: 187 AMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ ++Q + ++ I +L T +G++ +
Sbjct: 150 SFIGIAQSQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|91218299|ref|ZP_01255245.1| putative biopolymer transport protein [Psychroflexus torquis ATCC
700755]
gi|91183574|gb|EAS69971.1| putative biopolymer transport protein [Psychroflexus torquis ATCC
700755]
Length = 229
Score = 36.4 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI--- 197
+I ++ + +Y+ K ++ + + P IG +G ++G++ A L+ S
Sbjct: 113 EDINTAIENAGRLEVYKLEKNVSVLATIAGAAPMIGFLGTVIGMVLAFHELATSSGQAQM 172
Query: 198 --LGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 173 GSLAEGIYTAMTTTVAGLIVG 193
>gi|260889026|ref|ZP_05900289.1| HDIG domain protein [Leptotrichia hofstadii F0254]
gi|260861086|gb|EEX75586.1| HDIG domain protein [Leptotrichia hofstadii F0254]
Length = 524
Score = 36.4 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 3/111 (2%)
Query: 53 VIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKK--GSRNETENHIDD-PYNSTI 109
VI + F ++ + Y D+ +L ++ ++ S+ E E I+ T+
Sbjct: 11 VIFSFLTFFIAYFFGSSIFKKKYGDLNELELKIVDAKRRLETSKKEVEREIESFRKEETL 70
Query: 110 FTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
+ E I + R + E ++ +++ + + K
Sbjct: 71 KVKEELLNEKKIADDEIKKMKSELATKEERIAKKEETLETKMERLEEREAK 121
>gi|238759130|ref|ZP_04620299.1| TonB complex protein [Yersinia aldovae ATCC 35236]
gi|238702678|gb|EEP95226.1| TonB complex protein [Yersinia aldovae ATCC 35236]
Length = 326
Score = 36.4 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 184 DNNGIKERTAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 243
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 244 QTTNLAVVAPGIAEALLATALGLVAA 269
>gi|237748802|ref|ZP_04579282.1| TolQ [Oxalobacter formigenes OXCC13]
gi|229380164|gb|EEO30255.1| TolQ [Oxalobacter formigenes OXCC13]
Length = 228
Score = 36.4 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ E+D + ++ +G P +G+ G + GI+ A L+ + +
Sbjct: 118 MRAAYQREMDSLESHL----AFLASVGSVSPYVGLFGTVWGIMNAFRGLANVHQATLATV 173
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 174 APGIAEALIATAIGLFAA 191
>gi|153834538|ref|ZP_01987205.1| biopolymer transport protein [Vibrio harveyi HY01]
gi|156976470|ref|YP_001447376.1| biopolymer transport protein [Vibrio harveyi ATCC BAA-1116]
gi|148869057|gb|EDL68098.1| biopolymer transport protein [Vibrio harveyi HY01]
gi|156528064|gb|ABU73149.1| hypothetical protein VIBHAR_05243 [Vibrio harveyi ATCC BAA-1116]
Length = 232
Score = 36.4 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTL 210
++ ++ +G P IG++G +LG+I ++ S P L +G+++ T
Sbjct: 107 HQLHSGLRLLTLIGVISPLIGLLGTVLGLIDMFKGIASSTGNITPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
G+I++ L ++ + + + +
Sbjct: 167 AGLIIALPAISGAQLIGLWADRVIAKLEHTLNYVNLWLEGI 207
>gi|134280048|ref|ZP_01766759.1| protein TolQ [Burkholderia pseudomallei 305]
gi|217421193|ref|ZP_03452698.1| protein TolQ [Burkholderia pseudomallei 576]
gi|134248055|gb|EBA48138.1| protein TolQ [Burkholderia pseudomallei 305]
gi|217396605|gb|EEC36622.1| protein TolQ [Burkholderia pseudomallei 576]
Length = 225
Score = 36.4 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 28/187 (14%)
Query: 37 VAGAGLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGS 93
V G L +M+ I ++ + + D+ L N
Sbjct: 23 VMGLLLALSLMS--WTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG 80
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
E + + + + L MR +++ +
Sbjct: 81 --ALERIFESGMREFLKAKEKRLSDPALLLDGARRAMRASFQREMD------VLESNL-- 130
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGT 209
++ +G P IG+ G + GI+ + L+ + + I +L T
Sbjct: 131 ---------SFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVAT 181
Query: 210 LLGIILS 216
+G+ +
Sbjct: 182 AIGLFAA 188
>gi|238793632|ref|ZP_04637255.1| TonB complex protein [Yersinia intermedia ATCC 29909]
gi|238727047|gb|EEQ18578.1| TonB complex protein [Yersinia intermedia ATCC 29909]
Length = 336
Score = 36.4 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + I + K ++ +G P +G+ G + GI+ + +
Sbjct: 195 DNNGIKERAAFRLERRVAAIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 254
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 255 QTTNLAVVAPGIAEALLATALGLVAA 280
>gi|89094840|ref|ZP_01167773.1| TolQ protein [Oceanospirillum sp. MED92]
gi|89080895|gb|EAR60134.1| TolQ protein [Oceanospirillum sp. MED92]
Length = 226
Score = 36.4 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
I+ M + + + ++ +G + P IG+ G + GI+ + L+ + +
Sbjct: 109 IQRSMRVALAREEDKLERHLPFLATVGSTSPYIGLFGTVWGIMNSFRGLANVHQATLASV 168
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 169 APGISEALIATAIGLFAA 186
>gi|304437088|ref|ZP_07397051.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304370039|gb|EFM23701.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 208
Score = 36.4 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 79 LKLLYILMYNLKKGSRNETENHI-DDPYNSTIFTSIPTV-LENNELTTFICDYMRMIIVG 136
+ + L+Y E E + + + P V ++N + + + G
Sbjct: 27 IAVDRFLLYRRASQGARELEATVAESLRKHKMDEVAPAVEGKDNMVAHLVRSALDARKAG 86
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---Q 193
+E E ++ + +S + P +G++G I G+I++ +
Sbjct: 87 EDVPMTLEGAYGEAAMLLRARL----NYLSMIVTLAPLLGLLGTISGMIQSFSIFNLQAG 142
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
P + IG +L T G+ ++
Sbjct: 143 QPMAITGGIGEALVATATGLFVA 165
>gi|226952121|ref|ZP_03822585.1| Tol-Pal system TolQ protein [Acinetobacter sp. ATCC 27244]
gi|226837130|gb|EEH69513.1| Tol-Pal system TolQ protein [Acinetobacter sp. ATCC 27244]
Length = 232
Score = 36.4 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A + + Q + + I +L T +G+ +
Sbjct: 132 VLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAA 188
>gi|103485826|ref|YP_615387.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
gi|98975903|gb|ABF52054.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
Length = 232
Score = 36.4 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
+I + + M+ I + + ++ +G P +G+ G + GI+++ +
Sbjct: 105 VIDRDGTRERLGIAMNSAIAGEIDRLAEKIGTLATIGAVAPFVGLFGTVWGIMRSFTAIA 164
Query: 192 ---SQSPKILGTAIGVSLTGTLLGIILS 216
+ S ++ I +L T +G+ +
Sbjct: 165 AENNSSLAVVAPGIAEALFATAIGLFAA 192
>gi|325275151|ref|ZP_08141124.1| TonB-system energizer ExbB type-1 [Pseudomonas sp. TJI-51]
gi|324099723|gb|EGB97596.1| TonB-system energizer ExbB type-1 [Pseudomonas sp. TJI-51]
Length = 321
Score = 36.4 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 190 ERVSFRLERLVHASGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 249
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + ++ ++V
Sbjct: 250 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 301
>gi|254427665|ref|ZP_05041372.1| protein TolQ [Alcanivorax sp. DG881]
gi|196193834|gb|EDX88793.1| protein TolQ [Alcanivorax sp. DG881]
Length = 228
Score = 36.4 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK---AMGNLSQ-SPKILGTAI 202
M + K ++ +G + P +G+ G + GI+ A+ N+ Q + ++ I
Sbjct: 114 MRVALQREQTRLTKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALANVKQATLSVVAPGI 173
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 174 AEALIATAIGLFAA 187
>gi|163869099|ref|YP_001610335.1| biopolymer transport exbB protein [Bartonella tribocorum CIP
105476]
gi|161018782|emb|CAK02340.1| biopolymer transport exbB protein [Bartonella tribocorum CIP
105476]
Length = 291
Score = 36.4 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----K 196
+ +L+ + + ++ +G P +G+ + GI+ + ++QS
Sbjct: 165 ERVHSLLSRCLLAAIRRVAYGNAVLATIGAIAPFVGLFATVWGIMNSFIGIAQSQTTRLD 224
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+ ++
Sbjct: 225 VVAPGIAEALFATAMGLFVA 244
>gi|167584779|ref|ZP_02377167.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 243
Score = 36.4 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + +++ + D RM + I + + +D +
Sbjct: 78 DNPFLALALAGKEAADHHHQTQPHLHD--RMDVSDW-----ITRCLKDTMDEGIARMQGG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|120601889|ref|YP_966289.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|120562118|gb|ABM27862.1| Cell division and transport-associated protein TolQ [Desulfovibrio
vulgaris DP4]
Length = 311
Score = 36.4 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLC 220
++ + P IG+ G + GI+ A L+ + + I +L T +G+ ++
Sbjct: 124 LATTANTAPFIGLFGTVWGIMDAFHKLAGAKTAAIASVAPGISEALIATAVGLGVAIPAA 183
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVAIEYGR 262
+ R Q RL + L M P A+E G+
Sbjct: 184 IGYNLHMTRVRRVQARLISLAGLTLNTIMLETAPLPAVENGK 225
>gi|58039002|ref|YP_190966.1| ExbB protein [Gluconobacter oxydans 621H]
gi|58001416|gb|AAW60310.1| ExbB protein [Gluconobacter oxydans 621H]
Length = 241
Score = 36.4 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ ++ ++ +G + P +G+ G + GI+ + ++ S ++ I
Sbjct: 111 LERLEAAEGRRLMRGTGVLATIGATSPFVGLFGTVWGIMSSFTGIAAAHATSLAVVAPGI 170
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 171 AEALLATALGLVAA 184
>gi|332300737|ref|YP_004442658.1| MotA/TolQ/ExbB proton channel [Porphyromonas asaccharolytica DSM
20707]
gi|332177800|gb|AEE13490.1| MotA/TolQ/ExbB proton channel [Porphyromonas asaccharolytica DSM
20707]
Length = 275
Score = 36.4 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 172 LPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
P++G +G ++G++ A + SP ++ + V+L T+ G+I++ + + I
Sbjct: 188 APSLGFLGTVVGMVMAFDKIEKVGDISPTVVAGGMKVALITTIGGLIVA-MILQVFYNYI 246
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAI 253
S L+ +
Sbjct: 247 LSKVESILNRMEDASITLVDFAIKYN 272
>gi|167036340|ref|YP_001671571.1| tonB-system energizer ExbB [Pseudomonas putida GB-1]
gi|166862828|gb|ABZ01236.1| tonB-system energizer ExbB [Pseudomonas putida GB-1]
Length = 326
Score = 36.4 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 195 ERVSFRLERLVHASGRTMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 254
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + ++ ++V
Sbjct: 255 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 306
>gi|118594611|ref|ZP_01551958.1| putative biopolymer transport protein [Methylophilales bacterium
HTCC2181]
gi|118440389|gb|EAV47016.1| putative biopolymer transport protein [Methylophilales bacterium
HTCC2181]
Length = 197
Score = 36.4 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---SQSPKI 197
+ + + + D I Y+ K H ++ + P +G+ G I+G+++ + ++
Sbjct: 86 EVMNDAIIKAGDSISYQLEKYLHILAMISTVAPLLGLFGTIIGMVELFSSFTSDGHDVEM 145
Query: 198 LGTAIGVSLTGTLLGIILS 216
I V+L T GI+++
Sbjct: 146 FARGISVALYNTAGGIVVA 164
>gi|149924036|ref|ZP_01912419.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
gi|149815119|gb|EDM74672.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
Length = 240
Score = 36.0 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 59/179 (32%), Gaps = 11/179 (6%)
Query: 42 LGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHI 101
L ++ + +S+ + Y + ++ L L + + + H
Sbjct: 31 LIVLIIQF----VITLIMSIERLMVYNKAKSQSISYIMMLRNFLNERKLEDAVAAVKQHS 86
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
P + + + L+ E + + M+ + K
Sbjct: 87 SSPVAKVVGSGMDEYLQGLEALQEEGPD---DVGDFDIVDAVNRQMERTKERETANLKKG 143
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMG----NLSQSPKILGTAIGVSLTGTLLGIILS 216
++ G + P +G++G ++GII + + + I +L T +G+I++
Sbjct: 144 LALVATTGSTAPFVGLLGTVVGIINSFQGLSSDGGGGLSSVAGGISEALVATAVGLIVA 202
>gi|221069917|ref|ZP_03546022.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|220714940|gb|EED70308.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
Length = 219
Score = 36.0 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
A + + E + + ++ +G + P +G++G + GI A+G L+ S
Sbjct: 100 APDQRLMRRLREALGQASTQLQWGQTLLATIGATAPFVGLLGTVWGIHHALGTLAGSGQV 159
Query: 195 -PKILGTAIGVSLTGTLLGI------ILSYSLCNPLTSQIKSTRL 232
L +G +L T G+ +L+Y+L SQ+++
Sbjct: 160 EIAQLAGPVGEALVMTAAGLAVALPAVLAYNLLGRSASQLEAVLE 204
>gi|254229077|ref|ZP_04922497.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262396649|ref|YP_003288502.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. Ex25]
gi|151938368|gb|EDN57206.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262340243|gb|ACY54037.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. Ex25]
Length = 232
Score = 36.0 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVSLTGTL 210
++ ++ +G P IG++G +LG+I+ + + +P L +G+++ T
Sbjct: 107 HQLHSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL-IAYMNGAIPQVAI 258
G+I++ + ++ + + + + + +++ +A+
Sbjct: 167 AGLIIALPAISGAQIIGLWADRVIAKLEHTLNYVNLWLEGISLQHVSPDNSTLAV 221
>gi|313501280|gb|ADR62646.1| TonB-system energizer ExbB type-1 [Pseudomonas putida BIRD-1]
Length = 324
Score = 36.0 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 193 ERVSFRLERLVHASGRTMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 252
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + ++ ++V
Sbjct: 253 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 304
>gi|14595284|gb|AAK70856.1|AF315582_1 ExbB [Pseudomonas putida]
Length = 320
Score = 36.0 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 189 ERVSFRLERLVHASGRTMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 248
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + ++ ++V
Sbjct: 249 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 300
>gi|187736348|ref|YP_001878460.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
gi|187426400|gb|ACD05679.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
Length = 210
Score = 36.0 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAILGIIK 186
R+++ E E + E I + E+ A + + P GI+G G+++
Sbjct: 81 RLVLDALNAPLEDEASLKEMIQVKAREEFVTLQAGLPLLDMIVMIAPMFGILGTASGLVQ 140
Query: 187 AMG--NLSQSPKILGTAIGVSLTGTLLGIILS 216
+ +S ++ I +L T+ G+ ++
Sbjct: 141 IFSVFGMDESHGMIAQGIAQALNTTIAGLAIA 172
>gi|161525753|ref|YP_001580765.1| protein TolQ [Burkholderia multivorans ATCC 17616]
gi|189349525|ref|YP_001945153.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221201009|ref|ZP_03574049.1| protein TolQ [Burkholderia multivorans CGD2M]
gi|221206539|ref|ZP_03579552.1| protein TolQ [Burkholderia multivorans CGD2]
gi|221214393|ref|ZP_03587364.1| protein TolQ [Burkholderia multivorans CGD1]
gi|160343182|gb|ABX16268.1| protein TolQ [Burkholderia multivorans ATCC 17616]
gi|189333547|dbj|BAG42617.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221165650|gb|EED98125.1| protein TolQ [Burkholderia multivorans CGD1]
gi|221173848|gb|EEE06282.1| protein TolQ [Burkholderia multivorans CGD2]
gi|221178859|gb|EEE11266.1| protein TolQ [Burkholderia multivorans CGD2M]
Length = 225
Score = 36.0 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 19/174 (10%), Positives = 47/174 (27%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR +++ + ++
Sbjct: 92 EFLKAKEKRLSDPGLVLDGARRAMRASFQREMD------VLESNL-----------AFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|206561544|ref|YP_002232309.1| putative TolQ transport transmembrane protein [Burkholderia
cenocepacia J2315]
gi|198037586|emb|CAR53524.1| putative TolQ transport transmembrane protein [Burkholderia
cenocepacia J2315]
gi|325522826|gb|EGD01298.1| putative TolQ transport transmembrane protein [Burkholderia sp.
TJI49]
Length = 225
Score = 36.0 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 44/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFEKDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 92 EFLKAKEKRLSDPGLVLDGARRAMRASFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|153838943|ref|ZP_01991610.1| biopolymer transport protein [Vibrio parahaemolyticus AQ3810]
gi|149747577|gb|EDM58507.1| biopolymer transport protein [Vibrio parahaemolyticus AQ3810]
Length = 213
Score = 36.0 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
Query: 93 SRNETENHID--DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
++ H+ DP NS ++ L + M + A+S E+
Sbjct: 43 GKSAIRQHLASLDPTNSRDIEALADELSGKRPLLYRGVAMLLAHHSFAKSLR-EDAAGMW 101
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVS 205
+ ++ ++ +G P IG++G +LG+I+ + + +P L +G++
Sbjct: 102 LQEKRHQLHSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLA 161
Query: 206 LTGTLLGIILS 216
+ T G+I++
Sbjct: 162 MRTTAAGLIIA 172
>gi|328953805|ref|YP_004371139.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328454129|gb|AEB09958.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 179
Score = 36.0 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 9/100 (9%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGI 213
+++ + P +G+ G + G+IKA ++ P +L I +L T G+
Sbjct: 83 ESGLGSLNLIAVIAPLLGLTGTVTGMIKAFQVIATMGTNVDPSLLAAGIWEALITTAAGL 142
Query: 214 ILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
+ + + + L + L +K+ ++ G
Sbjct: 143 FV--GIPTHVAAHYLDRSLDEVALR--MKEIILDLRGGNN 178
>gi|304396830|ref|ZP_07378710.1| tonB-system energizer ExbB [Pantoea sp. aB]
gi|304355626|gb|EFM19993.1| tonB-system energizer ExbB [Pantoea sp. aB]
Length = 246
Score = 36.0 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + ++ +G P IG+ G + GI+ + +++ + ++ I
Sbjct: 116 LERRVAAFSRHAGRGNGFLATIGSVAPFIGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGI 175
Query: 203 GVSLTGTLLGIILS 216
+L T +G++ +
Sbjct: 176 AEALLATAVGLVAA 189
>gi|254457999|ref|ZP_05071426.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
gi|207085392|gb|EDZ62677.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
Length = 375
Score = 36.0 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 13/103 (12%)
Query: 122 LTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
L +I + I + +++ ++EE + E S P +GI+G
Sbjct: 35 LLKYINKNLLSIAGIEKANAPLDDFLNEEAKKMRNENFS-----SIAAGIFPTLGILGTF 89
Query: 182 LGIIKAM--------GNLSQSPKILGTAIGVSLTGTLLGIILS 216
+ I +M L + L +G + ++ GI LS
Sbjct: 90 ISIAISMPDFSSQTSQVLEEEISKLLGGVGTAFYVSIYGIFLS 132
>gi|119898621|ref|YP_933834.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119671034|emb|CAL94947.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
Length = 273
Score = 36.0 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 111 TSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGE 170
++ + ++ T D + I N I+ + + + ++ +G
Sbjct: 110 SAYHYIAKSGNDATAHHDGLLQFIDVN---EWIQLSIHRATEKVQSRLQGGLAFLATVGS 166
Query: 171 SLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+ P +G+ G + GI A+ + S + +G +L T +G+ ++
Sbjct: 167 TAPFVGLFGTVWGIYHALTAIGVAGQASIDKVAGPVGEALIMTAIGLAVA 216
>gi|119472452|ref|ZP_01614551.1| inner membrane protein [Alteromonadales bacterium TW-7]
gi|119444889|gb|EAW26188.1| inner membrane protein [Alteromonadales bacterium TW-7]
Length = 234
Score = 36.0 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ + EI+ I K ++ +G P IG+ G + GI+ A L + + +++
Sbjct: 113 MRVALSREIEKIE----KSLSFLATVGSISPYIGLFGTVWGIMNAFIALGEVKQATLQMV 168
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ +
Sbjct: 169 APGIAEALIATAMGLFAA 186
>gi|313886930|ref|ZP_07820633.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|312923627|gb|EFR34433.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Porphyromonas asaccharolytica PR426713P-I]
Length = 265
Score = 36.0 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 172 LPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
P++G +G ++G++ A + SP ++ + V+L T+ G+I++ + + I
Sbjct: 178 APSLGFLGTVVGMVMAFDKIEKVGDISPTVVAGGMKVALITTIGGLIVA-MILQVFYNYI 236
Query: 228 KSTRLKQHRLYIIVKKALIAYMNGAI 253
S L+ +
Sbjct: 237 LSKVESILNRMEDASITLVDFAIKYN 262
>gi|78065214|ref|YP_367983.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77965959|gb|ABB07339.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
Length = 222
Score = 36.0 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
RS + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 103 DRSERVLRALRHAMLRSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 162
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 163 QIENVAGPVGEALIMTAFGLVVA 185
>gi|167838895|ref|ZP_02465672.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia thailandensis MSMB43]
Length = 243
Score = 36.0 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 89 LKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD 148
+KK R + D+P+ + + +++ + D RM + + +
Sbjct: 66 VKKLGRASSSAQ-DNPFLALALSGKEASDHHHQTQPHLHD--RMDVSDW-----VTRCLK 117
Query: 149 EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGV 204
+ +D + ++ +G + P +G+ G + GI A+ + S + +G
Sbjct: 118 DTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGE 177
Query: 205 SLTGTLLGIILS 216
SL T G+ ++
Sbjct: 178 SLIMTAFGLFVA 189
>gi|167563916|ref|ZP_02356832.1| tolQ protein [Burkholderia oklahomensis EO147]
gi|167571051|ref|ZP_02363925.1| tolQ protein [Burkholderia oklahomensis C6786]
Length = 225
Score = 36.0 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 47/174 (27%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + L MR +++ + ++
Sbjct: 92 EFLKAKEKRLSDPALLLDGARRAMRASFQREMD------VLESNL-----------SFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|114331602|ref|YP_747824.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
gi|114308616|gb|ABI59859.1| outer membrane transport energization protein ExbB [Nitrosomonas
eutropha C91]
Length = 265
Score = 36.0 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 4/107 (3%)
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ + + + + +D I+ G S P IG+ G + GI A+
Sbjct: 97 GLEKLAAAGGTNELLTRSLRNSLDQEAARIEYGLTIIASAGSSAPYIGLFGTVWGIYHAL 156
Query: 189 GNLS----QSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTR 231
+ + + +G +L T LG+ ++ + I+ R
Sbjct: 157 IQIGLSGQGTLDKVAGPVGEALIMTALGLAVAIPAVLAYNAFIRRNR 203
>gi|257054054|ref|YP_003131887.1| hypothetical protein Huta_2993 [Halorhabdus utahensis DSM 12940]
gi|256692817|gb|ACV13154.1| conserved hypothetical protein [Halorhabdus utahensis DSM 12940]
Length = 582
Score = 36.0 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Query: 4 IIGLFITILCIIGGF------YAMGGNPYILIQPFEIVIVAGAGLGGFVM 47
+G + IL II G G L P +V++ G + ++
Sbjct: 27 FLGKRVVILAIIVGIAFLVRPLVHGVVYAALFSPSGLVLIGGGTVTALIL 76
>gi|225462771|ref|XP_002263465.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 803
Score = 36.0 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 66/187 (35%), Gaps = 31/187 (16%)
Query: 29 IQPFEIVIV--AGAGLGGFVMANPLKVIKDSGVS-------------LLEIFGYKALGQ- 72
I P+ +I+ G G ++ NP I D L Y G+
Sbjct: 537 IPPYFALIIRAIGVLEGIALVGNPDFAIVDEAYPYLAQRLLTDESPRLRNALRYTIYGKS 596
Query: 73 -----DTYCDVLKLLYILMYNLKKGSRNET-----ENHIDDPYNSTIFTSIPTVLENNEL 122
+ + DV++ + K G E I NS+IF P+ +
Sbjct: 597 GVFDAERFIDVMQAFEDFITAAKSGGGENMNGGMAELGILQSQNSSIFPGFPSSTSQLQQ 656
Query: 123 TTFICDYMRMIIVGNARSYEIENLMDEE---IDIILYEKLKPYHAISHMGESLPAIGIVG 179
+ ++ + E L+DE +D I E+L A+ MG++ P +V
Sbjct: 657 PVQTRAALAFLLSDKGN-FFREFLLDEIVKGMDAIAREQLVQIMAVLGMGDAAPVFSMVP 715
Query: 180 AILGIIK 186
A G+IK
Sbjct: 716 A-FGLIK 721
>gi|126642626|ref|YP_001085610.1| tolerance to group A colicins single-stranded DNA filamentous phage
[Acinetobacter baumannii ATCC 17978]
Length = 207
Score = 36.0 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A + + Q + + I +L T +G+ +
Sbjct: 108 LASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAA 163
>gi|323496779|ref|ZP_08101824.1| ExbB-like protein [Vibrio sinaloensis DSM 21326]
gi|323318204|gb|EGA71170.1| ExbB-like protein [Vibrio sinaloensis DSM 21326]
Length = 235
Score = 36.0 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTL 210
++ ++ +G P IG++G +LG+I+ ++ S P L +G+++ T
Sbjct: 107 HQLNSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGVAASTGNITPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
G++++ L ++ + + + +
Sbjct: 167 AGLLIALPAIAGAQLLGLWADKVMAKLEHTLNYVNLWLEGI 207
>gi|326560564|gb|EGE10945.1| hypothetical protein E9K_09489 [Moraxella catarrhalis 103P14B1]
gi|326568445|gb|EGE18525.1| hypothetical protein E9S_08734 [Moraxella catarrhalis BC7]
gi|326574937|gb|EGE24867.1| hypothetical protein E9Y_04491 [Moraxella catarrhalis 101P30B1]
Length = 465
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG-----TAIGVSLTGTL 210
+ KP H I + L +IGI+G GI+ A+ S + + + ++
Sbjct: 37 DDGHKPRHFIDSIPTLLTSIGILGTFFGIVLALLAFDDSDIKSHINDIISGMKTAFITSV 96
Query: 211 LGIILS 216
G++LS
Sbjct: 97 TGLLLS 102
>gi|241767252|ref|ZP_04764992.1| protein TolQ [Acidovorax delafieldii 2AN]
gi|241362086|gb|EER58205.1| protein TolQ [Acidovorax delafieldii 2AN]
Length = 233
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
+ + P +G+ G + GI+ A + + I +L T +G+ +
Sbjct: 132 LGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVATAIGLFAA 187
>gi|78060438|ref|YP_367013.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77964988|gb|ABB06369.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 311
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
++ R+ IE ++ I + + +G + P +G+ G + GI A+ +
Sbjct: 166 LLDSVDRNTWIELNIERSITNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIG 225
Query: 193 ----QSPKILGTAIGVSLTGTLLGIILS 216
S + +G +L T +G+ ++
Sbjct: 226 IAGQASIDKVAGPVGEALIMTAIGLAVA 253
>gi|46198633|ref|YP_004300.1| tolQ protein [Thermus thermophilus HB27]
gi|55980653|ref|YP_143950.1| TolQ-type transport protein [Thermus thermophilus HB8]
gi|46196256|gb|AAS80673.1| tolQ protein [Thermus thermophilus HB27]
gi|55772066|dbj|BAD70507.1| probable TolQ-type transport protein [Thermus thermophilus HB8]
Length = 116
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 157 EKLKPYHAISHMGE---SLPAIGIVGAILGIIKAMGNLSQ--SPKILGTAIGVSLTGTLL 211
+ + +G+ P +G+ G LG+I+A L Q +P++L I +LT T +
Sbjct: 34 RRKATARTLDRLGDLAQFAPLLGLFGTSLGMIRAFLALGQGGNPELLAQGIAEALTNTGM 93
Query: 212 GIILS 216
G+ ++
Sbjct: 94 GLFVA 98
>gi|134294847|ref|YP_001118582.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134138004|gb|ABO53747.1| Cell division and transport-associated protein TolQ [Burkholderia
vietnamiensis G4]
Length = 225
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 44/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFEKDFWSGGDLQALYQSAANNRHTIG--ALERIFEAGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 92 EFLKAKEKRLSDPGLVLDGARRAMRAAFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|296113887|ref|YP_003627825.1| hypothetical protein MCR_1675 [Moraxella catarrhalis RH4]
gi|295921581|gb|ADG61932.1| putative membrane protein [Moraxella catarrhalis RH4]
gi|326561437|gb|EGE11787.1| hypothetical protein E9M_06288 [Moraxella catarrhalis 46P47B1]
Length = 465
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG-----TAIGVSLTGTL 210
+ KP H I + L +IGI+G GI+ A+ S + + + ++
Sbjct: 37 DDGHKPRHFIDSIPTLLTSIGILGTFFGIVLALLAFDDSDIKSHINDIISGMKTAFITSV 96
Query: 211 LGIILS 216
G++LS
Sbjct: 97 TGLLLS 102
>gi|254284318|ref|ZP_04959286.1| protein TolQ [gamma proteobacterium NOR51-B]
gi|219680521|gb|EED36870.1| protein TolQ [gamma proteobacterium NOR51-B]
Length = 234
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 134 LASVGSTSPYIGLFGTVWGIMHSFRGLANATQATLAAVAPGISEALIATAMGLFAA 189
>gi|254505844|ref|ZP_05117989.1| biopolymer transport protein ExbB1 [Vibrio parahaemolyticus 16]
gi|219551067|gb|EED28047.1| biopolymer transport protein ExbB1 [Vibrio parahaemolyticus 16]
Length = 235
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTL 210
++ ++ +G P IG++G +LG+I+ ++ S P L +G+++ T
Sbjct: 107 HQLNSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGVAASTGNITPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA--IEYGR 262
G++++ L ++ + + + + + + + + IE
Sbjct: 167 AGLLIALPAIAGAQLLGLWADKVMAKLEHTLNYVNLWLEGI-SLQHVSPERAIHNIESAP 225
Query: 263 KVLPLSE 269
K + SE
Sbjct: 226 KQIQPSE 232
>gi|184159153|ref|YP_001847492.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|183210747|gb|ACC58145.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
Length = 232
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A + + Q + + I +L T +G+ +
Sbjct: 133 LASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAA 188
>gi|225166410|ref|ZP_03728073.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224799348|gb|EEG17912.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 226
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLL 211
+ + P +G++G + G++ G L + + +G +L T
Sbjct: 124 RYQQGIAVLDTCITIAPLLGLLGTVTGMMNTFGALGSGDIAANAGQITGGVGEALIATAC 183
Query: 212 GIILSYSLCNPLTSQIKSTRLK 233
G+ ++ P + + + +
Sbjct: 184 GLAIAIVGLLPF-NALNTRIEQ 204
>gi|153000264|ref|YP_001365945.1| Tol-Pal system TolQ [Shewanella baltica OS185]
gi|160874897|ref|YP_001554213.1| protein TolQ [Shewanella baltica OS195]
gi|217973707|ref|YP_002358458.1| protein TolQ [Shewanella baltica OS223]
gi|304409841|ref|ZP_07391461.1| protein TolQ [Shewanella baltica OS183]
gi|307304197|ref|ZP_07583950.1| protein TolQ [Shewanella baltica BA175]
gi|151364882|gb|ABS07882.1| Tol-Pal system TolQ [Shewanella baltica OS185]
gi|160860419|gb|ABX48953.1| protein TolQ [Shewanella baltica OS195]
gi|217498842|gb|ACK47035.1| protein TolQ [Shewanella baltica OS223]
gi|304352359|gb|EFM16757.1| protein TolQ [Shewanella baltica OS183]
gi|306913095|gb|EFN43518.1| protein TolQ [Shewanella baltica BA175]
gi|315267134|gb|ADT93987.1| protein TolQ [Shewanella baltica OS678]
Length = 228
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
+Y R+ + + + + + + L +++ A ++ +G + P IG+ G +
Sbjct: 87 FKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKLEANLPLLATIGSTSPYIGLFGTV 146
Query: 182 LGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
GI+ + + ++ I +L T +G+ +
Sbjct: 147 WGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLFAA 185
>gi|110638417|ref|YP_678626.1| biopolymer transport protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281098|gb|ABG59284.1| outer membrane transport energization protein ExbB [Cytophaga
hutchinsonii ATCC 33406]
Length = 275
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ + +G++G ++G+IKA L+ + + L T I +L T LGI S
Sbjct: 174 ILATLASVATLVGLLGTVMGMIKAFAALASSGTPNAEALATGISEALINTALGIASS 230
>gi|260551458|ref|ZP_05825642.1| hypothetical protein HMPREF0014_02656 [Acinetobacter sp. RUH2624]
gi|260405452|gb|EEW98945.1| hypothetical protein HMPREF0014_02656 [Acinetobacter sp. RUH2624]
Length = 232
Score = 36.0 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A + + Q + + I +L T +G+ +
Sbjct: 133 LASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAA 188
>gi|255588558|ref|XP_002534642.1| Biopolymer transport exbB protein, putative [Ricinus communis]
gi|223524846|gb|EEF27737.1| Biopolymer transport exbB protein, putative [Ricinus communis]
Length = 240
Score = 36.0 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS----PKILGTAI 202
+ ID + ++ +G + P +G+ G + GI A+ L + +
Sbjct: 111 LKSSIDESTSRLQRGLAVLASIGSTAPFVGLFGTVWGIYHALLMLGTGGQARIDQVAGPV 170
Query: 203 GVSLTGTLLGIILS 216
G +L T G+ ++
Sbjct: 171 GEALIMTAFGLFVA 184
>gi|169632717|ref|YP_001706453.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii SDF]
gi|169795061|ref|YP_001712854.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii AYE]
gi|213158277|ref|YP_002320328.1| protein TolQ [Acinetobacter baumannii AB0057]
gi|215482610|ref|YP_002324802.1| protein TolQ [Acinetobacter baumannii AB307-0294]
gi|239501029|ref|ZP_04660339.1| protein TolQ [Acinetobacter baumannii AB900]
gi|260556545|ref|ZP_05828763.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|301344813|ref|ZP_07225554.1| protein TolQ [Acinetobacter baumannii AB056]
gi|301510232|ref|ZP_07235469.1| protein TolQ [Acinetobacter baumannii AB058]
gi|301595125|ref|ZP_07240133.1| protein TolQ [Acinetobacter baumannii AB059]
gi|332851091|ref|ZP_08433200.1| protein TolQ [Acinetobacter baumannii 6013150]
gi|332869660|ref|ZP_08438848.1| protein TolQ [Acinetobacter baumannii 6013113]
gi|332875981|ref|ZP_08443767.1| protein TolQ [Acinetobacter baumannii 6014059]
gi|169147988|emb|CAM85851.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii AYE]
gi|169151509|emb|CAP00272.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii]
gi|193078073|gb|ABO13008.2| tolerance to group A colicins single-stranded DNA filamentous phage
[Acinetobacter baumannii ATCC 17978]
gi|213057437|gb|ACJ42339.1| protein TolQ [Acinetobacter baumannii AB0057]
gi|213987830|gb|ACJ58129.1| protein TolQ [Acinetobacter baumannii AB307-0294]
gi|260409804|gb|EEX03104.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|322509066|gb|ADX04520.1| tolQ [Acinetobacter baumannii 1656-2]
gi|323519047|gb|ADX93428.1| group A colicins tolerance protein [Acinetobacter baumannii
TCDC-AB0715]
gi|332730255|gb|EGJ61580.1| protein TolQ [Acinetobacter baumannii 6013150]
gi|332732562|gb|EGJ63795.1| protein TolQ [Acinetobacter baumannii 6013113]
gi|332735847|gb|EGJ66888.1| protein TolQ [Acinetobacter baumannii 6014059]
Length = 232
Score = 36.0 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKA---MGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A + + Q + + I +L T +G+ +
Sbjct: 133 LASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAA 188
>gi|83719386|ref|YP_441922.1| tolQ protein [Burkholderia thailandensis E264]
gi|167580766|ref|ZP_02373640.1| tolQ protein [Burkholderia thailandensis TXDOH]
gi|167618869|ref|ZP_02387500.1| tolQ protein [Burkholderia thailandensis Bt4]
gi|167837691|ref|ZP_02464574.1| tolQ protein [Burkholderia thailandensis MSMB43]
gi|257138093|ref|ZP_05586355.1| tolQ protein [Burkholderia thailandensis E264]
gi|83653211|gb|ABC37274.1| tolQ protein [Burkholderia thailandensis E264]
Length = 225
Score = 36.0 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 47/174 (27%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFERDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + L MR +++ + ++
Sbjct: 92 EFLKAKEKRLNDPALLLDGARRAMRASFQREMD------VLESNL-----------SFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|162448919|ref|YP_001611286.1| putative transport transmembrane protein, tolQ [Sorangium
cellulosum 'So ce 56']
gi|161159501|emb|CAN90806.1| putative transport transmembrane protein, tolQ [Sorangium
cellulosum 'So ce 56']
Length = 246
Score = 36.0 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 5/112 (4%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----IL 198
++++ I +S + + P IG+ G + GI+ A + Q ++
Sbjct: 108 LDSIAKRAIVTETQRASALMPTLSSIAAASPFIGLFGTVYGIMDAFLRIGQQKSASLPVV 167
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
AIG +L T +G+ + + I + + +
Sbjct: 168 APAIGEALIATAIGLFAAIPAVI-AYNGINKRVDDLLAALEAASEGWVEIAS 218
>gi|149185614|ref|ZP_01863930.1| TolQ, tolQ protein [Erythrobacter sp. SD-21]
gi|148830834|gb|EDL49269.1| TolQ, tolQ protein [Erythrobacter sp. SD-21]
Length = 232
Score = 36.0 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I MD +I + + + ++ +G P +G+ G + GI+ + + S S +
Sbjct: 115 RIATAMDSQIAQEADDVAERLNFLATVGAVAPFVGLFGTVWGIMNSFFQIGAQESSSLAV 174
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 175 VAPGISEALFATAIGLFAA 193
>gi|110833616|ref|YP_692475.1| biopolymer transport protein TolQ [Alcanivorax borkumensis SK2]
gi|110646727|emb|CAL16203.1| biopolymer transport protein TolQ [Alcanivorax borkumensis SK2]
Length = 228
Score = 36.0 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK---AMGNLSQ-SPKILGTAI 202
M + K ++ +G + P +G+ G + GI+ A+ N+ Q + ++ I
Sbjct: 114 MRVALQREQTRLTKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALANVKQATLSVVAPGI 173
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 174 AEALIATAIGLFAA 187
>gi|87199036|ref|YP_496293.1| MotA/TolQ/ExbB proton channel [Novosphingobium aromaticivorans DSM
12444]
gi|87134717|gb|ABD25459.1| Cell division and transport-associated protein TolQ
[Novosphingobium aromaticivorans DSM 12444]
Length = 233
Score = 36.0 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 5/123 (4%)
Query: 99 NHIDDPYNSTIFTSIPTV-LENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE 157
ID + +P+V + LT + I + + +D +
Sbjct: 73 RDIDQFHKDNKGKDLPSVRVVAAALTEWRRSTSGSAIDRDGTRQRLTTALDGAVVAETDA 132
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGI 213
+ ++ +G P +G+ G + GI+ + N+ + S ++ I +L T +G+
Sbjct: 133 LASRLNFLATVGSVAPFVGLFGTVWGIMDSFFNIGAQQNSSLAVVAPGISEALFATAIGL 192
Query: 214 ILS 216
+
Sbjct: 193 FAA 195
>gi|326562209|gb|EGE12537.1| hypothetical protein E9G_01153 [Moraxella catarrhalis 7169]
gi|326567163|gb|EGE17285.1| hypothetical protein E9Q_07469 [Moraxella catarrhalis BC1]
Length = 465
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG-----TAIGVSLTGTL 210
+ KP H I + L +IGI+G GI+ A+ S + + + ++
Sbjct: 37 DDGHKPRHFIDSIPTLLTSIGILGTFFGIVLALLAFDDSDIKSHINDIISGMKTAFITSV 96
Query: 211 LGIILS 216
G++LS
Sbjct: 97 TGLLLS 102
>gi|256828397|ref|YP_003157125.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
gi|256577573|gb|ACU88709.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
Length = 263
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KIL 198
+ ++++ + L E + ++ + P IG+ G + GI+ + + Q +
Sbjct: 142 LRRVLEQGVSEGLGEMSRSLSFLATCANAAPFIGLFGTVWGIMNSFHAIGQMKTAALAAV 201
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 202 APGISEALVATAIGLAVA 219
>gi|206580290|ref|YP_002236568.1| TonB-system energizer ExbB [Klebsiella pneumoniae 342]
gi|238896519|ref|YP_002921259.1| biopolymer transport protein ExbB [Klebsiella pneumoniae
NTUH-K2044]
gi|288933551|ref|YP_003437610.1| tonB-system energizer ExbB [Klebsiella variicola At-22]
gi|206569348|gb|ACI11124.1| TonB-system energizer ExbB [Klebsiella pneumoniae 342]
gi|238548841|dbj|BAH65192.1| TonB-dependent enterochelin uptake/biopolymer transport protein
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288888280|gb|ADC56598.1| tonB-system energizer ExbB [Klebsiella variicola At-22]
Length = 243
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + + ++ +G P +G+ G + GI+ + ++Q + ++ I
Sbjct: 115 LERRVAAVGRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGI 174
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 175 AEALLATAIGLFAA 188
>gi|330890916|gb|EGH23577.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv. mori
str. 301020]
Length = 317
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 182 ERVSFRLERLVAACGRNMSMGTSVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 241
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 242 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 293
>gi|297537853|ref|YP_003673622.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297257200|gb|ADI29045.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 201
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 10/79 (12%)
Query: 148 DEEIDIILYEKLKPYHAIS-------HMGESLPAIGIVGAILGIIKAMG---NLSQSPKI 197
+ + I H++ + P +G++G ++G+++ G +
Sbjct: 86 EITKEAIEETGRAVAHSLEKYLSTLGTIATVAPLLGLLGTVIGMVELFGAFTSTGHDIAQ 145
Query: 198 LGTAIGVSLTGTLLGIILS 216
I V+L T GI+++
Sbjct: 146 FARGISVALYNTAAGIVVA 164
>gi|262037577|ref|ZP_06011033.1| 2',3'-cyclic-nucleotide 2'-phosphodiesterase [Leptotrichia
goodfellowii F0264]
gi|261748399|gb|EEY35782.1| 2',3'-cyclic-nucleotide 2'-phosphodiesterase [Leptotrichia
goodfellowii F0264]
Length = 524
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Query: 58 GVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKK--GSRNETENHIDDPYNSTIFTSIPT 115
+ F ++ + Y ++ +L ++ ++ S+ E E I+ T
Sbjct: 16 LAFFIAYFFGSSVFKKKYGELSELELRIVDAKRRLESSKKEVEREIESFKKEETLKVKET 75
Query: 116 VLENNELTTFICDYMRMIIVGNARSY-EIENLMDEEIDIILYEKLK 160
+L ++ M+ IV + E ++ +++ + + K
Sbjct: 76 LLNEKKIADEEIKKMKSEIVSKEERLAKKEETLETKMERLEERESK 121
>gi|152996172|ref|YP_001341007.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150837096|gb|ABR71072.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 208
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKA----MGNLSQSPKILGTAIGVSLTGTLL 211
+E + + + + P +G++G ++G+IK M + + + +L I +L T
Sbjct: 101 HELERFMNTLGTIAAISPLLGLLGTVVGMIKVFSVLMESGAGNTALLAGGISEALLTTAA 160
Query: 212 GIILS 216
G+ ++
Sbjct: 161 GLGVA 165
>gi|26991982|ref|NP_747407.1| ferric siderophore transport system protein ExbB [Pseudomonas
putida KT2440]
gi|24987113|gb|AAN70871.1|AE016731_6 ferric siderophore transport system protein ExbB [Pseudomonas
putida KT2440]
Length = 320
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 189 ERVSFRLERLVHASGRTMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 248
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + ++ ++V
Sbjct: 249 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 300
>gi|295135758|ref|YP_003586434.1| MotA/TolQ/ExbB family biopolymer transport protein [Zunongwangia
profunda SM-A87]
gi|294983773|gb|ADF54238.1| MotA/TolQ/ExbB family biopolymer transport protein [Zunongwangia
profunda SM-A87]
Length = 233
Score = 36.0 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI--- 197
+I ++ + +Y+ K ++ + + P IG +G ++G++ A L+ S
Sbjct: 117 EDINTAIENAGRLEVYKLEKNVSILATIAGAAPMIGFLGTVIGMVIAFHELATSSGQAQM 176
Query: 198 --LGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 177 GLLAEGIYTAMTTTVAGLIVG 197
>gi|257125476|ref|YP_003163590.1| RNA binding metal dependent phosphohydrolase [Leptotrichia buccalis
C-1013-b]
gi|257049415|gb|ACV38599.1| RNA binding metal dependent phosphohydrolase [Leptotrichia buccalis
C-1013-b]
Length = 524
Score = 36.0 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 3/111 (2%)
Query: 53 VIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKK--GSRNETENHIDD-PYNSTI 109
VI + F ++ + Y D+ +L ++ ++ S+ E E I+ T+
Sbjct: 11 VIFSFLTFFIAYFFGSSIFKKKYGDLNELELKIVDAKRRLETSKKEVEREIESFRKEETL 70
Query: 110 FTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLK 160
+ E I + R + E ++ +++ + + K
Sbjct: 71 KVKEELLNEKKIADDEIKKMKSELATKEERIAKKEETLETKMERLEEREAK 121
>gi|259909764|ref|YP_002650120.1| biopolymer transport protein ExbB [Erwinia pyrifoliae Ep1/96]
gi|224965386|emb|CAX56918.1| Biopolymer transport protein [Erwinia pyrifoliae Ep1/96]
Length = 244
Score = 36.0 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N ++ + I + ++ +G P +G+ G + GI+ + ++Q
Sbjct: 103 DNNGIKERTAFRLERRVAAIGRHPGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQT 162
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 163 QTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|152971943|ref|YP_001337052.1| biopolymer transport protein ExbB [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262042318|ref|ZP_06015483.1| TonB system transporter ExbB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|290511390|ref|ZP_06550759.1| tonB-system energizer ExbB [Klebsiella sp. 1_1_55]
gi|330008854|ref|ZP_08306316.1| tonB-system energizer ExbB [Klebsiella sp. MS 92-3]
gi|150956792|gb|ABR78822.1| hypothetical protein KPN_03426 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259040382|gb|EEW41488.1| TonB system transporter ExbB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|289776383|gb|EFD84382.1| tonB-system energizer ExbB [Klebsiella sp. 1_1_55]
gi|328535054|gb|EGF61576.1| tonB-system energizer ExbB [Klebsiella sp. MS 92-3]
Length = 238
Score = 36.0 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + + ++ +G P +G+ G + GI+ + ++Q + ++ I
Sbjct: 110 LERRVAAVGRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGI 169
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 170 AEALLATAIGLFAA 183
>gi|261251454|ref|ZP_05944028.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio orientalis CIP 102891]
gi|260938327|gb|EEX94315.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio orientalis CIP 102891]
Length = 228
Score = 36.0 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTL 210
++ ++ +G P IG++G +LG+I+ ++ S P L +G+++ T
Sbjct: 107 HQLNSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGVAASSGNITPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
G++++ L ++ + + + +
Sbjct: 167 AGLLIALPAIAGAQLLGLWADKVMAKLEHTLNYVNLWLEGI 207
>gi|220904135|ref|YP_002479447.1| protein TolQ [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219868434|gb|ACL48769.1| protein TolQ [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 231
Score = 36.0 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
R +GN+ ++N+ + + + L + ++ + P IG+ G + GI+ +
Sbjct: 89 RSKELGNSSEVVVDNVRRALRQGVGSELSRLQRSLSLLATTANTAPFIGLFGTVWGIMSS 148
Query: 188 MGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ S S + I +L T +G+ ++
Sbjct: 149 FHSIGMLKSASLATVAPGISEALVATAIGLAVA 181
>gi|106879758|emb|CAJ90448.1| putative MotA-TolQ-ExbB proton channel protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 296
Score = 36.0 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 73/179 (40%), Gaps = 15/179 (8%)
Query: 28 LIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSL--LEIFGYKALGQDTYCDVLKLLYIL 85
+Q F +++V G G + + ++ D G + L + L + + L +
Sbjct: 56 FLQIFSLIVVPGIGFCP-LEGSKMQEFVDIGEKIIFLVMLLASILAIAVFIERLIVYKRN 114
Query: 86 MYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYE-IE 144
+ + I +LE++ + ++ ++ +++ +
Sbjct: 115 FNKESESLLDSLTLLI----RHRDLKGTEKLLESHPMENSYTRFIHFVLEREKENHKGLS 170
Query: 145 NLMDEEI--DIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQSPKIL 198
LM+ +I + + E+ P ++ +G + P IG++G +LG+IKA +G L S +
Sbjct: 171 ELMEGKILKEKLSLEERLP--ILNTLGNNTPFIGLLGTVLGVIKAFYGLGTLGNSGAEV 227
>gi|237654176|ref|YP_002890490.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
gi|237625423|gb|ACR02113.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
Length = 253
Score = 36.0 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----Q 193
I + + I + ++ +G + P +G+ G + GI A+ N+S
Sbjct: 108 DTDEVITRALRKSIALSTAALESGLTVLASIGSTAPFVGLFGTVWGIYHALVNISVSGMA 167
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G+ ++
Sbjct: 168 TLDKVAGPVGEALIMTAFGLFVA 190
>gi|323492746|ref|ZP_08097890.1| TonB system transport protein ExbB3 [Vibrio brasiliensis LMG 20546]
gi|323313121|gb|EGA66241.1| TonB system transport protein ExbB3 [Vibrio brasiliensis LMG 20546]
Length = 185
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 172 LPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQI 227
P +G++G + G+I + S +PK++ + I ++ T+ G++ + + +
Sbjct: 108 CPMLGLLGTVTGMISVFDVMANQGSSNPKLMASGISLATLPTMAGMVAALTGMFSYARLV 167
Query: 228 KSTRLKQHRL 237
K+ ++K+ +L
Sbjct: 168 KACQMKEIKL 177
>gi|294775165|ref|ZP_06740691.1| conserved domain protein [Bacteroides vulgatus PC510]
gi|294450977|gb|EFG19451.1| conserved domain protein [Bacteroides vulgatus PC510]
Length = 199
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+ + Y+R ++ R ++ L+ + +I + L ++ MG P +G++G ++
Sbjct: 76 SLVIAYIRRVLESKDRPAHVQRLL-ADFEITADKDLAISKTLTKMG---PMLGLMGTLIP 131
Query: 184 IIKAMGNLS-QSPKILGTAIGVSLTGTLLGIILS 216
+ A+ LS + + V+ T++G+ S
Sbjct: 132 MGPALVGLSTGDIASMAYNMQVAFATTVVGLFSS 165
>gi|167721229|ref|ZP_02404465.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei DM98]
Length = 131
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 1 ERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 60
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 61 QIENVAGPVGEALIMTAFGLVVA 83
>gi|121595092|ref|YP_986988.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|222111435|ref|YP_002553699.1| protein tolq [Acidovorax ebreus TPSY]
gi|120607172|gb|ABM42912.1| Cell division and transport-associated protein TolQ [Acidovorax sp.
JS42]
gi|221730879|gb|ACM33699.1| protein TolQ [Acidovorax ebreus TPSY]
Length = 233
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
+ + P +G+ G + GI+ A + + I +L T +G+ +
Sbjct: 132 LGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVATAIGLFAA 187
>gi|107021878|ref|YP_620205.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116688826|ref|YP_834449.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|170732125|ref|YP_001764072.1| protein TolQ [Burkholderia cenocepacia MC0-3]
gi|254246217|ref|ZP_04939538.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|105892067|gb|ABF75232.1| Cell division and transport-associated protein TolQ [Burkholderia
cenocepacia AU 1054]
gi|116646915|gb|ABK07556.1| Cell division and transport-associated protein TolQ [Burkholderia
cenocepacia HI2424]
gi|124870993|gb|EAY62709.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|169815367|gb|ACA89950.1| protein TolQ [Burkholderia cenocepacia MC0-3]
Length = 225
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 44/174 (25%), Gaps = 26/174 (14%)
Query: 50 PLKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYN 106
I ++ + + D+ L N E +
Sbjct: 34 SWTFIFRKWFAIRRARAQTERFEKDFWSGGDLQALYQSAANNRHTIG--ALERIFESGMR 91
Query: 107 STIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
+ + + + MR E ++
Sbjct: 92 EFLKAKEKRLSDPGLVLDGARRAMRASFQREMDVLE-----------------ANLAFLA 134
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G P IG+ G + GI+ + L+ + + I +L T +G+ +
Sbjct: 135 SVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGLFAA 188
>gi|107021729|ref|YP_620056.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116688675|ref|YP_834298.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|105891918|gb|ABF75083.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116646764|gb|ABK07405.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
Length = 222
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 18/145 (12%), Positives = 46/145 (31%), Gaps = 12/145 (8%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRM--------IIV 135
L+ K+ P ++ +
Sbjct: 41 WLLVRAKRQGPRALAAFWRAPSLDAGIAALAGADRERVFVPLAEAARDAADDHDPTALAA 100
Query: 136 GNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
RS + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 101 RVERSERVLRALRHAMLRSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASG 160
Query: 195 ---PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 161 QAQIENVAGPVGEALIMTAFGLVVA 185
>gi|254448104|ref|ZP_05061567.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262230|gb|EDY86512.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 173
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 140 SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSP 195
++ I + ++++ L + I M P +G+ G + G+I+ + S SP
Sbjct: 67 AHNIRQDLVVQVEMALEANM---GLIKVMVAICPLLGLTGTVTGMIEVFDVMAYMGSGSP 123
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ + + I ++ T+ G++ + + + R++ +++I
Sbjct: 124 RAMASGIFKAMLPTMAGMVGA--ITGVFAHSLLQRRIESEKIHI 165
>gi|150004735|ref|YP_001299479.1| integral membrane protein [Bacteroides vulgatus ATCC 8482]
gi|149933159|gb|ABR39857.1| integral membrane protein [Bacteroides vulgatus ATCC 8482]
Length = 199
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+ + Y+R ++ R ++ L+ + +I + L ++ MG P +G++G ++
Sbjct: 76 SLVIAYIRRVLESKDRPAHVQRLL-ADFEITADKDLAISKTLTKMG---PMLGLMGTLIP 131
Query: 184 IIKAMGNLS-QSPKILGTAIGVSLTGTLLGIILS 216
+ A+ LS + + V+ T++G+ S
Sbjct: 132 MGPALVGLSTGDIASMAYNMQVAFATTVVGLFSS 165
>gi|330812607|ref|YP_004357069.1| transporter [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327380715|gb|AEA72065.1| putative transporter [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 323
Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 191 ERVSFRLERLVAACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 250
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 251 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAEVLLLV 302
>gi|264680774|ref|YP_003280684.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|262211290|gb|ACY35388.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
Length = 219
Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
+ E + + ++ +G + P +G++G + GI A+G L+ L +
Sbjct: 109 LREALGQASTQLQWGQTLLATIGATAPFVGLLGTVWGIHHALGTLAGSGQVDIAQLAGPV 168
Query: 203 GVSLTGTLLGI------ILSYSLCNPLTSQIKSTRL 232
G +L T G+ +L+Y+L SQ+++
Sbjct: 169 GEALVMTAAGLAVALPAVLAYNLLGRSASQLEAVLE 204
>gi|259418407|ref|ZP_05742325.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
gi|259345802|gb|EEW57646.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
Length = 321
Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-----QSPKILGTAIGVSLTGTLLG 212
A+ + P +G++G ++G+I A L P +L I +L T G
Sbjct: 216 ARSGLGALELISTIAPLLGLLGTVMGMIAAFQALQAAGSKADPAMLAGGIWEALLTTAAG 275
Query: 213 IILS 216
+ ++
Sbjct: 276 MAVA 279
>gi|254418272|ref|ZP_05031996.1| protein TolQ [Brevundimonas sp. BAL3]
gi|196184449|gb|EDX79425.1| protein TolQ [Brevundimonas sp. BAL3]
Length = 250
Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I+ ++ I +S + + P IG+ G + GI+ A G + + +
Sbjct: 114 RIDRALNSLISRESQRIENGLGVLSVVATASPFIGLFGTVWGIMNAFGRIAAAGNTNLTT 173
Query: 198 LGTAIGVSLTGTLLGI 213
+ AI +L T +G+
Sbjct: 174 VAPAIAEALFATAIGL 189
>gi|325281070|ref|YP_004253612.1| integral membrane protein [Odoribacter splanchnicus DSM 20712]
gi|324312879|gb|ADY33432.1| integral membrane protein [Odoribacter splanchnicus DSM 20712]
Length = 206
Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 90 KKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDE 149
+K + + +++ ++ T L + T F+ +++ G + + +
Sbjct: 44 RKKTERDLNEKLENMAEEEVY-GFRTDLGKMQPTPFVFTARKLLADGMTSIH--RDRLIG 100
Query: 150 EIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-QSPKILGTAIGVSLTG 208
+I +L ++ G P +G++G ++ + A+ LS + + V+
Sbjct: 101 GYEIQESARLNIAKNLTKFG---PILGLMGTLIPMGPALVGLSIGDVASMAYNMQVAFAT 157
Query: 209 TLLGIILS 216
T++G+
Sbjct: 158 TVIGLFSG 165
>gi|291514824|emb|CBK64034.1| Biopolymer transport proteins [Alistipes shahii WAL 8301]
Length = 250
Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 172 LPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS---YSLCNPLT 224
P +G +G ++G+I A + SP ++ I V+L TL+G+I + N +
Sbjct: 164 SPMLGFMGTVVGMIAAFDAIQAAGDISPTLVAGGIKVALLTTLMGLIAAVVLQLFYNYIV 223
Query: 225 SQIKSTRLKQHRLYIIVKKALIAY 248
S+I S I + L AY
Sbjct: 224 SKIDSLVNDMEDSSITLMDILTAY 247
>gi|253582118|ref|ZP_04859342.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
gi|251836467|gb|EES65004.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
Length = 203
Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
+S + P +G++G + G+IKA +S +L I +L T G+ ++
Sbjct: 113 ILSLVAHITPLLGLLGTVTGMIKAFQAVSIHGTGDASVLAKGISEALFTTAGGLFVA 169
>gi|170731972|ref|YP_001763919.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|254246339|ref|ZP_04939660.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|124871115|gb|EAY62831.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|169815214|gb|ACA89797.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 222
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 12/145 (8%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGN-----A 138
L+ K+ P ++ + A
Sbjct: 41 WLLVRAKRQGPRALAAFWRAPSLDAGIAALAGADRERVFVPLAEAARDAADDHDPTALAA 100
Query: 139 RSYEIENLMDEEIDIILY---EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS- 194
R E ++ +L+ ++ +G + P +G++G + GI A+G+++ S
Sbjct: 101 RVERSERVLRALRHAMLHSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASG 160
Query: 195 ---PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 161 QAQIENVAGPVGEALIMTAFGLVVA 185
>gi|300112855|ref|YP_003759430.1| protein TolQ [Nitrosococcus watsonii C-113]
gi|299538792|gb|ADJ27109.1| protein TolQ [Nitrosococcus watsonii C-113]
Length = 226
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
M + + ++ +G + P IG+ G + GI+ + L + ++ I
Sbjct: 114 MRVSLAREIDRLEASLPFLATVGSTSPYIGLFGTVWGIMNSFRGLGNAHQATLAMVAPGI 173
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 174 AEALIATAMGLFAA 187
>gi|260903141|ref|ZP_05911536.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
gi|308107793|gb|EFO45333.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
Length = 232
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 61/166 (36%), Gaps = 14/166 (8%)
Query: 93 SRNETENHID--DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
++ H+ DP NS ++ L + M + A+S E+
Sbjct: 43 GKSAIRQHLASLDPTNSRDIEALADELSGKRPLLYRGVAMLLAHHSFAKSLR-EDAAGMW 101
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVS 205
+ ++ ++ +G P IG++G +LG+I+ + + +P L +G++
Sbjct: 102 LQEKRHQLHSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLA 161
Query: 206 LTGTLLGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ T G+I++ + ++ + + + +
Sbjct: 162 MRTTAAGLIIALPAISGAQIIGLWADRVLAKLEHTLNYVNLWLEGI 207
>gi|241738338|ref|XP_002414074.1| transcription factor, putative [Ixodes scapularis]
gi|215507928|gb|EEC17382.1| transcription factor, putative [Ixodes scapularis]
Length = 374
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 21/128 (16%)
Query: 177 IVGAILGIIKAMGNLSQSPKILGTAIGVSLT-GTLLGIILS------YSLCNPLTSQIKS 229
+ A LG++ + P + + V + +++ Y + +
Sbjct: 120 MSSAWLGLVH----FASPPADIKLMLVVYMPDKNFYMGMIANDQETLYGAVKQVVDTHRK 175
Query: 230 TRLKQHRLYIIVKKALIAYMNGAI-------PQVAIEYGRKVLPLSERPSIEIVAQEVLQ 282
+ + ++ + +A G P +A+ LP S RPS A+
Sbjct: 176 QQQTKSKMLQTMSGGTMAQAGGMNMPVPVPNPAMAVNQVSLFLPPSLRPSF---AEWRRL 232
Query: 283 YNHNKKAS 290
Y +A+
Sbjct: 233 YGGPPRAA 240
>gi|167740202|ref|ZP_02412976.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 14]
gi|167817417|ref|ZP_02449097.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 91]
Length = 140
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
R + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 10 ERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 69
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 70 QIENVAGPVGEALIMTAFGLVVA 92
>gi|152993090|ref|YP_001358811.1| hypothetical protein SUN_1503 [Sulfurovum sp. NBC37-1]
gi|151424951|dbj|BAF72454.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 367
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 172 LPAIGIVGAILGI--------IKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPL 223
P +GI+G + I +K + +L Q IL + IG + ++ GI LS +
Sbjct: 127 FPMLGILGTFIAIAISMPDFTVKDLESLDQEISILLSGIGTAFYASIYGIALS-LIWTYF 185
Query: 224 TSQIKSTRLKQHRLYI 239
+ S K
Sbjct: 186 EKRGNSKVDKNLHDLE 201
>gi|153003741|ref|YP_001378066.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152027314|gb|ABS25082.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 240
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG------TAIGVSLTGTLLG 212
+ + +G + P +G+ G ++GII+A +L+ + I +L T +G
Sbjct: 106 ERGLSFLGTLGNNAPFLGLFGTVVGIIRAFSDLAVGAAQGAGASAVMSGISEALVATAVG 165
Query: 213 IILS 216
I ++
Sbjct: 166 IFVA 169
>gi|91976831|ref|YP_569490.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91683287|gb|ABE39589.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 265
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + ++ +G P +G+ G + GI+ A +S+ + ++ I
Sbjct: 146 LERVEAAAVRRVAIGTGLLASIGAVAPFVGLFGTVWGIMNAFIGISKANTTNLAVVAPGI 205
Query: 203 GVSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 206 AEALLATALGLVAA 219
>gi|167565058|ref|ZP_02357974.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia oklahomensis EO147]
Length = 243
Score = 36.0 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQGG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|87309286|ref|ZP_01091422.1| probable biopolymer transport protein [Blastopirellula marina DSM
3645]
gi|87287925|gb|EAQ79823.1| probable biopolymer transport protein [Blastopirellula marina DSM
3645]
Length = 419
Score = 36.0 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 12/135 (8%)
Query: 110 FTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMG 169
P L+ + L + + + V + + ++ + D + + + +
Sbjct: 84 LEEYPQRLQRHSLWRRLFQGIEHVHVNGSAAG-LQEELKYFADQEAERAYQSFSLVRIVI 142
Query: 170 ESLPAIGIVGAILGIIKAMGNLSQSP---------KILGTAIGVSLTGTLLGIILSYSLC 220
+ P +G +G ++GI A+GNLS + L + V+ T L + LS +
Sbjct: 143 WATPMLGFLGTVIGITLALGNLSPEALVNEPKAAMESLLAGLSVAFDTTALALSLS--IF 200
Query: 221 NPLTSQIKSTRLKQH 235
I +
Sbjct: 201 LMFAQFIADRIENEL 215
>gi|307129122|ref|YP_003881138.1| membrane spanning protein in TonB-ExbB-ExbD complex [Dickeya
dadantii 3937]
gi|306526651|gb|ADM96581.1| membrane spanning protein in TonB-ExbB-ExbD complex [Dickeya
dadantii 3937]
Length = 312
Score = 36.0 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ- 193
N + + + + ++ +G P IG+ G + GI+ + ++Q
Sbjct: 171 DNNGIKERTAFRFERRVAATGRQMGRGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAQS 230
Query: 194 ---SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T +G++ +
Sbjct: 231 QTTNLAVVAPGIAEALLATAIGLVAA 256
>gi|218264445|ref|ZP_03478286.1| hypothetical protein PRABACTJOHN_03982 [Parabacteroides johnsonii
DSM 18315]
gi|218221989|gb|EEC94639.1| hypothetical protein PRABACTJOHN_03982 [Parabacteroides johnsonii
DSM 18315]
Length = 245
Score = 36.0 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 65/182 (35%), Gaps = 9/182 (4%)
Query: 41 GLGGFVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENH 100
G V + +K + F + L I+ NL + + ++
Sbjct: 26 AAGTAVEGGMYQALKTKFIEGGADFMSLVAIALIFGLAFCLERIIYLNLAETNSSKLLKS 85
Query: 101 IDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMD--EEIDIILYEK 158
I+D + + + Y ++ + ++++ +L +
Sbjct: 86 IEDALDKGDVEGAKAIARDTRGPIASIAYQGLMRIDQGIDVVEKSIVSYGGVQGGLLEKN 145
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
+ M P++G +G ++G++ A + Q SP ++ + V+L T+ G++
Sbjct: 146 MSWITLFIAMA---PSLGFLGTVVGMVMAFDKIEQVGDISPTVVAGGMKVALITTVGGLV 202
Query: 215 LS 216
++
Sbjct: 203 VA 204
>gi|34540565|ref|NP_905044.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
gingivalis W83]
gi|188994670|ref|YP_001928922.1| putative MotA/TolQ/ExbB proton channel protein [Porphyromonas
gingivalis ATCC 33277]
gi|34396878|gb|AAQ65943.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
gingivalis W83]
gi|188594350|dbj|BAG33325.1| putative MotA/TolQ/ExbB proton channel protein [Porphyromonas
gingivalis ATCC 33277]
Length = 270
Score = 36.0 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 53/144 (36%), Gaps = 9/144 (6%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNA 138
+ L I+ NL + + ID T+ + Y ++ +
Sbjct: 89 ICLERIIYLNLADTNNEKLLADIDQALERGDVEGAKTIARDTRGPVASIAYQGLMRIDQG 148
Query: 139 RSYEIENLMD--EEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----S 192
+++ +L + L M P++G +G ++G++ A +
Sbjct: 149 VDIVERSIVSYGGVQSGLLEKNLSWITLFIAMA---PSLGFLGTVVGMVMAFDKIERVGD 205
Query: 193 QSPKILGTAIGVSLTGTLLGIILS 216
SP ++ + V+L T+ G+I++
Sbjct: 206 ISPTVVAGGMKVALITTIGGLIVA 229
>gi|298207908|ref|YP_003716087.1| putative biopolymer transport protein [Croceibacter atlanticus
HTCC2559]
gi|83850549|gb|EAP88417.1| putative biopolymer transport protein [Croceibacter atlanticus
HTCC2559]
Length = 228
Score = 36.0 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI--- 197
+I ++ + +Y+ K ++ + + P IG +G ++G++ A L+ S
Sbjct: 112 EDINTAIENAGRLEVYKLEKNVSVLATIAGAAPMIGFLGTVIGMVLAFHQLATSSGQAEM 171
Query: 198 --LGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 172 GNLAEGIYTAMTTTVAGLIVG 192
>gi|86749211|ref|YP_485707.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86572239|gb|ABD06796.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 313
Score = 36.0 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 64/178 (35%), Gaps = 12/178 (6%)
Query: 49 NPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNST 108
+P + + + + + AL +L I + + R+ + D S
Sbjct: 88 SPWSMFLQADIVVKAVMVGLALASMITWTILIAKKIELGRARWRLRSALKQIADARSMSE 147
Query: 109 IFTSIPTVLENNELTTFICDYMRM--IIVGNARSYEIENL----MDEEIDIILYEKLKPY 162
+ + + ++ + +R + G A I+ E +
Sbjct: 148 --AQLALGDKTSPVSMLLAAALREARVSAGLASDEGIKERAASSFSEIVRAESRHMRHGM 205
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P IG+ G + GI+ + +S+ + ++ I +L T +G++ +
Sbjct: 206 GFLATIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVAA 263
>gi|223938138|ref|ZP_03630035.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223893182|gb|EEF59646.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 244
Score = 36.0 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPK 196
++ ++ + + ++ P +G++G + G++ G + S S
Sbjct: 126 EHVKRSLENTVAQQSLKLESGLILLAIAVSGAPFLGLLGTVWGVMSTFGGIAREGSASLA 185
Query: 197 ILGTAIGVSLTGTLLGIILS 216
+ + +L T+ G++++
Sbjct: 186 AMAPGVSAALITTVAGLLVA 205
>gi|149376330|ref|ZP_01894093.1| Biopolymer transport protein [Marinobacter algicola DG893]
gi|149359344|gb|EDM47805.1| Biopolymer transport protein [Marinobacter algicola DG893]
Length = 235
Score = 36.0 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSP 195
EIE M+E + ++ K +S + +G++G I+G+I A + SQ
Sbjct: 92 EEIEYAMEEGLLEVMPRLEKRTQYLSTLANISTLMGLLGTIIGLIAAFTAVAAADPSQKA 151
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +I V++ T G++ + L + S +++ + + +
Sbjct: 152 SLLSQSISVAMNTTAFGLMSAIPLLL-IHSVLQTKTNEIIDSFEM 195
>gi|319956778|ref|YP_004168041.1| hypothetical protein Nitsa_1034 [Nitratifractor salsuginis DSM
16511]
gi|319419182|gb|ADV46292.1| hypothetical protein Nitsa_1034 [Nitratifractor salsuginis DSM
16511]
Length = 376
Score = 36.0 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 168 MGESLPAIGIVGAILGIIKAM--------GNLSQSPKILGTAIGVSLTGTLLGIILS 216
P +GI+G L I +M L Q IL +G + ++ GI LS
Sbjct: 124 AATIFPMLGILGTFLAIAISMPDFTVNSSEKLDQQISILLAGVGTAFYASIYGIFLS 180
>gi|255020127|ref|ZP_05292197.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
gi|254970420|gb|EET27912.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
Length = 233
Score = 36.0 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILSYSLC 220
++ + P +G++G + GI+ N+ + + + +L TL G+ +
Sbjct: 137 LASISSVAPFVGLLGTVWGIMTTFMNIGAAQQATLATVAPPVAEALIATLAGLFAAIPAT 196
Query: 221 NPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
++ + Y + ++ P
Sbjct: 197 F-FYNRFVHRLDELDSHYEVFMDEFTNILHRQTP 229
>gi|157148574|ref|YP_001455893.1| biopolymer transport protein ExbB [Citrobacter koseri ATCC BAA-895]
gi|157085779|gb|ABV15457.1| hypothetical protein CKO_04401 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 36.0 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + + ++ +G P +G+ G + GI+ + ++Q + ++ I
Sbjct: 110 LERRVAAVGRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGI 169
Query: 203 GVSLTGTLLGIILS 216
+L T +G++ +
Sbjct: 170 AEALLATAIGLVAA 183
>gi|254362581|ref|ZP_04978678.1| TonB family auxiliary protein TolQ [Mannheimia haemolytica PHL213]
gi|261493431|ref|ZP_05989956.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496880|ref|ZP_05993248.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. OVINE]
gi|110735353|gb|ABG89247.1| TolQ [Mannheimia haemolytica]
gi|153094187|gb|EDN75074.1| TonB family auxiliary protein TolQ [Mannheimia haemolytica PHL213]
gi|261307404|gb|EEY08739.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310925|gb|EEY12103.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 226
Score = 36.0 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ R+ I M+ ++ + + +G P IG+ G +
Sbjct: 88 FKEFTRLQQANPDAPESIIQGSTRAMNLALNREMESLENYIPFLGTVGSISPYIGLFGTV 147
Query: 182 LGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
GI+ + LS + + + I +L T +G+ +
Sbjct: 148 WGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLFAA 186
>gi|5106982|gb|AAD39910.1|AF119047_3 ExbB-like protein [Vibrio parahaemolyticus]
Length = 231
Score = 36.0 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 61/166 (36%), Gaps = 14/166 (8%)
Query: 93 SRNETENHID--DPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEE 150
++ H+ DP NS ++ L + M + A+S E+
Sbjct: 43 GKSAIRQHLASLDPTNSRDIEALADELSGKRPLLYRGVAMLLAHHSFAKSLR-EDAAGMW 101
Query: 151 IDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVS 205
+ ++ ++ +G P IG++G +LG+I+ + + +P L +G++
Sbjct: 102 LQEKRHQLHSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLA 161
Query: 206 LTGTLLGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
+ T G+I++ + ++ + + + +
Sbjct: 162 MRTTAAGLIIALPAISGAQIIGLWADRVLAKLEHTLNYVNLWLEGI 207
>gi|303246170|ref|ZP_07332451.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302492566|gb|EFL52437.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 235
Score = 35.6 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAI---SHMGESLPAIGIVGAIL 182
++ ++ + G+A +N+ I E A+ + + P IG+ G +
Sbjct: 84 FKEFTKLSLSGDAEKLVSDNVRRILHHGIAEEMRGLSRALPLLAIAANAAPFIGLFGTVW 143
Query: 183 GIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
GI+ + + Q S + I +L T +G+ ++
Sbjct: 144 GIMHSFHAIGQMQSASLATVAPGISEALIATAVGLAVA 181
>gi|289625454|ref|ZP_06458408.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289646380|ref|ZP_06477723.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330866519|gb|EGH01228.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 317
Score = 35.6 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 182 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 241
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 242 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 293
>gi|33152787|ref|NP_874140.1| colicin transport protein, TolQ [Haemophilus ducreyi 35000HP]
gi|33149011|gb|AAP96529.1| colicin transport protein, TolQ [Haemophilus ducreyi 35000HP]
Length = 226
Score = 35.6 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+++R+ V M ++ + + +G P IG+ G +
Sbjct: 88 FKEFLRLQQVNPEAPEATMKGTSRAMHLALNREVESLESYIPFLGTVGSISPYIGLFGTV 147
Query: 182 LGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
GI+ + LS + + + I +L T +G+ +
Sbjct: 148 WGIMHSFMGLSGVKQATLQSVAPGIAEALIATAIGLFAA 186
>gi|299529347|ref|ZP_07042785.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|298722596|gb|EFI63515.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 215
Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
+ E + + ++ +G + P +G++G + GI A+G L+ L +
Sbjct: 105 LREALGQASTQLQWGQTLLATIGATAPFVGLLGTVWGIHHALGTLAGSGQVDIAQLAGPV 164
Query: 203 GVSLTGTLLGI------ILSYSLCNPLTSQIKSTRL 232
G +L T G+ +L+Y+L SQ+++
Sbjct: 165 GEALVMTAAGLAVALPAVLAYNLLGRSASQLEAVLE 200
>gi|298374697|ref|ZP_06984655.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_19]
gi|298269065|gb|EFI10720.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_19]
Length = 247
Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+I A + Q +P ++ + V+L T+ G+I
Sbjct: 145 EKNMSWITLFIAMAPSLGFLGTVVGMIMAFDKIEQVGDINPTVVAGGMKVALITTVGGLI 204
Query: 215 LS 216
++
Sbjct: 205 VA 206
>gi|227431261|ref|ZP_03913315.1| bacterial cell division membrane protein FtsW [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227353023|gb|EEJ43195.1| bacterial cell division membrane protein FtsW [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 404
Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVM 47
+G + + I GG + G + ++ P VI+ GA +G ++
Sbjct: 179 LGTLLVFVAIFGGVALVSGVTWRILAP---VIILGATVGTTLL 218
>gi|171915259|ref|ZP_02930729.1| MotA/TolQ/ExbB proton channel family domain protein
[Verrucomicrobium spinosum DSM 4136]
Length = 231
Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ---- 193
+++ ++ E + + + + + + P IG++G I G++ L+
Sbjct: 83 VPREQLKEIVQEAGQLEVPRLERYLSVLHGIAHAAPLIGLLGTIAGLMDTFTQLNNVNGY 142
Query: 194 -SPKILGTAIGVSLTGTLLGIILS---YSLCNPLTSQIKSTRLK 233
+P + + SL + LG++++ + + L ++ +
Sbjct: 143 ATPADVARGVYQSLITSALGLVVAIPSFLFYSFLAAKARHLMHD 186
>gi|319764772|ref|YP_004128709.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330826988|ref|YP_004390291.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
gi|317119333|gb|ADV01822.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329312360|gb|AEB86775.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
Length = 217
Score = 35.6 bits (81), Expect = 7.4, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 53/144 (36%), Gaps = 12/144 (8%)
Query: 85 LMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVG-------- 136
LM+ + T P + +P + + ++ G
Sbjct: 38 LMWRARVDVPRSTAAFWQSPSLAAGLERLPPCDREALVLPLVRAAAQVACSGSGAALADQ 97
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
A + + + + + +L ++ +G + P +G++G + GI A+G L+
Sbjct: 98 GAIAQRLTRALRDALHGVLGRLQFGQVLLATVGSTAPFVGLLGTVWGIHHALGALAGAEQ 157
Query: 194 -SPKILGTAIGVSLTGTLLGIILS 216
+ + L +G +L T G+ ++
Sbjct: 158 ITIERLAGPVGEALVMTAAGLSVA 181
>gi|119477232|ref|ZP_01617468.1| TolQ protein [marine gamma proteobacterium HTCC2143]
gi|119449595|gb|EAW30833.1| TolQ protein [marine gamma proteobacterium HTCC2143]
Length = 240
Score = 35.6 bits (81), Expect = 7.4, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ +G P +G+ G + GI+ + +L+ + + I +L T +G+ +
Sbjct: 134 LATVGSISPYVGLFGTVWGIMTSFQSLATMNQATLATVAPGISEALVATAMGLFAA 189
>gi|157372444|ref|YP_001480433.1| TonB-system energizer ExbB type-1 [Serratia proteamaculans 568]
gi|157324208|gb|ABV43305.1| TonB-system energizer ExbB type-1 [Serratia proteamaculans 568]
Length = 323
Score = 35.6 bits (81), Expect = 7.4, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + + ++ +G P +G+ G + GI+ + +
Sbjct: 182 DNNGIKERTGFRLERRVAGYSRNMGRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 241
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 242 QTTNLAVVAPGIAEALLATALGLVAA 267
>gi|313632070|gb|EFR99167.1| rod shape-determining protein RodA [Listeria seeligeri FSL N1-067]
Length = 389
Score = 35.6 bits (81), Expect = 7.4, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 5 IGLFITILCIIGGFY-AMGGNPYILIQPFEIVIVAGAGLGGFVMANP--LKVIKDSGVSL 61
+G + + II G G IL+ F + V GA L V+ N L+ +
Sbjct: 168 LGTILVFIAIIIGMVFISGVTWKILVPLFSAITVIGATLIYLVLYNQAFLQKLGFEPYQF 227
Query: 62 LEIFGYKALGQDTYCDVLKLLYIL 85
I + +D D ++LL +
Sbjct: 228 KRITSWLRPEEDPLGDGMQLLRSM 251
>gi|295097525|emb|CBK86615.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 228
Score = 35.6 bits (81), Expect = 7.4, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 60/167 (35%), Gaps = 7/167 (4%)
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
I G+ L + + + ++L L K+ + + + D +S S+
Sbjct: 11 IVMIGLILASVITWAIFFSKS-AELLSQKRRLKREQKQLAEARSLDQASDITSSFHAKSL 69
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
T+L N G ++ + + + ++ +G P
Sbjct: 70 TTLLVNEAQNELELSAGSEDNEGIKERTGFR--LERRVAAVGRHMGRGNGYLATIGAISP 127
Query: 174 AIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+G+ G + GI+ + ++Q + ++ I +L T +G++ +
Sbjct: 128 FVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 174
>gi|84388526|ref|ZP_00991073.1| TolQ protein [Vibrio splendidus 12B01]
gi|84377075|gb|EAP93946.1| TolQ protein [Vibrio splendidus 12B01]
Length = 227
Score = 35.6 bits (81), Expect = 7.4, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ + L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHSFIALGEVKQATLAMVAPGIAEALIATAMGLFAA 186
>gi|95929656|ref|ZP_01312398.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134353|gb|EAT16010.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 144
Score = 35.6 bits (81), Expect = 7.4, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILGTAI----GVSLTGTLLGIILSYS 218
H I+ +G + P IG++G +LGI+ + Q + AI ++L T +G++++
Sbjct: 57 HIIATIGSNAPFIGLLGTVLGIMLTFYTMGQQGAVDTHAIMTGLALALKVTAIGLVIAIP 116
Query: 219 LCNPLTSQIKSTRLKQHRLYII 240
+ + + + I
Sbjct: 117 TVA-FYNVLIRRAKEMLLEWEI 137
>gi|330986877|gb|EGH84980.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 317
Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 182 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 241
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 242 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 293
>gi|292490338|ref|YP_003525777.1| protein TolQ [Nitrosococcus halophilus Nc4]
gi|291578933|gb|ADE13390.1| protein TolQ [Nitrosococcus halophilus Nc4]
Length = 225
Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R ++ G R+ + + EID + ++ G + P IG+ G + GI+ +
Sbjct: 103 RAVLDGTQRAMRVS--LAREIDTLE----AALPFLATAGSTSPYIGLFGTVWGIMNSFRA 156
Query: 191 LSQ----SPKILGTAIGVSLTGTLLGIILS 216
L + ++ I +L T +G+ +
Sbjct: 157 LGNAHQATLAMVAPGIAEALIATAMGLFAA 186
>gi|90022177|ref|YP_528004.1| peptidase A8, signal peptidase II [Saccharophagus degradans 2-40]
gi|89951777|gb|ABD81792.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 231
Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 9/133 (6%)
Query: 126 ICDYMRMIIVGNARSYEI----ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
++ R+ G+ I + M + + ++ + P IG+ G +
Sbjct: 91 FKEFTRLRQQGSTDPDAIMEGTQRTMRVAMAREEEKLEVFLPFLASVASVSPYIGLFGTV 150
Query: 182 LGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRL 237
GI+ + L+ ++ I +L T +G+ + ++ S
Sbjct: 151 WGIMNSFRGLATESQATLALVAPGISEALVATAMGLFAAIPAVL-AYNRFSSNAESLISR 209
Query: 238 YIIVKKALIAYMN 250
Y + A ++
Sbjct: 210 YETFAEEFSAILH 222
>gi|15805483|ref|NP_294179.1| biopolymer transport protein [Deinococcus radiodurans R1]
gi|6458137|gb|AAF10032.1|AE001904_8 biopolymer transport protein, putative [Deinococcus radiodurans R1]
Length = 230
Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAIGVSLTGTLLG 212
A+ + P +G++G ++G++++ + +P L I +L T G
Sbjct: 106 RMYAGLSALGTAAQIAPLLGLLGTVVGMVRSFLVFSATNNPTPTELAQGISEALINTAAG 165
Query: 213 I---ILSYSLCNPLTSQIKSTRLKQHRLYI 239
+ I++Y N L ++ + + R+
Sbjct: 166 LIVAIVAYVARNALRNKANAVAAQAERVRE 195
>gi|228470105|ref|ZP_04055014.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas uenonis
60-3]
gi|228308243|gb|EEK17098.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas uenonis
60-3]
Length = 267
Score = 35.6 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 172 LPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
P++G +G ++G++ A + SP ++ + V+L T+ G+I++
Sbjct: 180 APSLGFLGTVVGMVMAFDKIEKVGDISPTVVAGGMKVALITTIGGLIVA 228
>gi|167589397|ref|ZP_02381785.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 151
Score = 35.6 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
RS + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 32 ERSERVLRALRHAMLRSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 91
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 92 QIESVAGPVGEALIMTAFGLVVA 114
>gi|146282081|ref|YP_001172234.1| TonB system transport protein ExbB [Pseudomonas stutzeri A1501]
gi|145570286|gb|ABP79392.1| TonB system transport protein ExbB [Pseudomonas stutzeri A1501]
Length = 206
Score = 35.6 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ R +E + ++I ++ +G + P IG+ G + GI+ A+ +
Sbjct: 64 LAQSIDRGNRVERNLRQQILKERRALEAGLAVLASIGSTSPFIGLFGTVWGIMDALTMIG 123
Query: 193 QSP----KILGTAIGVSLTGTLLGIILS 216
+ + IG +L T +GI ++
Sbjct: 124 VTGNAGLDTVAGPIGHALIATGVGIAVA 151
>gi|170727079|ref|YP_001761105.1| protein TolQ [Shewanella woodyi ATCC 51908]
gi|169812426|gb|ACA87010.1| protein TolQ [Shewanella woodyi ATCC 51908]
Length = 229
Score = 35.6 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEIEN----LMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAI 181
+Y R+ + N + + M + + + ++ +G + P IG+ G +
Sbjct: 88 FKEYARLSKLNNKVPEAVMDGSYRAMRVSLSREMEKLETHLPLLATIGSTSPYIGLFGTV 147
Query: 182 LGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
GI+ + L + + ++ I +L T +G+ +
Sbjct: 148 WGIMNSFIALGAVENATLAMVAPGIAEALIATAMGLFAA 186
>gi|32471118|ref|NP_864111.1| biopolymer transport protein [Rhodopirellula baltica SH 1]
gi|32396820|emb|CAD71788.1| probable biopolymer transport protein [Rhodopirellula baltica SH 1]
Length = 499
Score = 35.6 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP- 195
++ + + + D + I + ++P +G +G ++GI + +G L +
Sbjct: 199 GDLPQDLREMSERDADAAHD----SFGLIRIIVWAIPMLGFLGTVIGITQTLGGLDFTDG 254
Query: 196 ----KILGTAIGVSLTGTLLGIILS 216
L + + V+ T LG++LS
Sbjct: 255 TAAVDRLKSGLYVAFDTTALGLVLS 279
>gi|255691966|ref|ZP_05415641.1| putative TolQ-type transport protein [Bacteroides finegoldii DSM
17565]
gi|260622375|gb|EEX45246.1| putative TolQ-type transport protein [Bacteroides finegoldii DSM
17565]
Length = 462
Score = 35.6 bits (81), Expect = 7.7, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-----QSPKILGTAIGVSLTGTLLG 212
L + +S + P IG++G ++G+I+A G ++ IL +I +L T G
Sbjct: 354 HLARIYPLSVIASLAPLIGLLGTVVGMIEAFGLVALYGDEGGASILSDSISKALITTAAG 413
Query: 213 IILS 216
+I++
Sbjct: 414 LIIA 417
>gi|209695362|ref|YP_002263291.1| TolQ protein, inner membrane component [Aliivibrio salmonicida
LFI1238]
gi|208009314|emb|CAQ79580.1| TolQ protein, inner membrane component [Aliivibrio salmonicida
LFI1238]
Length = 228
Score = 35.6 bits (81), Expect = 7.7, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIK---AMGNLSQ-SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ A+G + Q + ++ I +L T +G+ +
Sbjct: 131 LATVGSITPYIGLFGTVWGIMHSFIALGAVKQATLAMVAPGIAEALVATAMGLFAA 186
>gi|149910562|ref|ZP_01899201.1| Putative TolQ protein [Moritella sp. PE36]
gi|149806405|gb|EDM66378.1| Putative TolQ protein [Moritella sp. PE36]
Length = 230
Score = 35.6 bits (81), Expect = 7.7, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGII---KAMGNLSQ-SPKILGTAI 202
M + + E + ++ +G P IG+ G + GI+ A+G + Q + ++ I
Sbjct: 114 MRVALSREVDELEVHLNNLATIGSISPYIGLFGTVWGIMSSFIALGAVQQATLAMVAPGI 173
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 174 AEALIATAMGLFAA 187
>gi|104784347|ref|YP_610845.1| solvent/drug/ferric siderophore transport protein ExbB [Pseudomonas
entomophila L48]
gi|95113334|emb|CAK18062.1| solvent/drug/ferric siderophore transport protein ExbB [Pseudomonas
entomophila L48]
Length = 320
Score = 35.6 bits (81), Expect = 7.7, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 189 ERVSFRLERLVAASGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 248
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + ++ ++V
Sbjct: 249 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 300
>gi|330957280|gb|EGH57540.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 287
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 152 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 211
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 212 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 263
>gi|323497269|ref|ZP_08102288.1| TonB-system energizer ExbB type-1 [Vibrio sinaloensis DSM 21326]
gi|323317626|gb|EGA70618.1| TonB-system energizer ExbB type-1 [Vibrio sinaloensis DSM 21326]
Length = 281
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 130 MRMIIVGNARSYEIENLMDEEIDIILYEKLKP----YHAISHMGESLPAIGIVGAILGII 185
M M +G I+ + ++ + E + ++ +G P +G+ G + GI+
Sbjct: 135 MHMSSLGATSEDGIKERVQLRLERVQAELGRKMTSLTGVLATIGSVSPFVGLFGTVWGIM 194
Query: 186 KAMGNLSQSPK----ILGTAIGVSLTGTLLGIILS 216
A ++++ ++ I +L T +G+I +
Sbjct: 195 NAFIGIAKAKSTTLVVVAPGIAEALLATAIGLIAA 229
>gi|260777293|ref|ZP_05886187.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio coralliilyticus ATCC BAA-450]
gi|260606959|gb|EEX33233.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio coralliilyticus ATCC BAA-450]
Length = 229
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 46/113 (40%), Gaps = 13/113 (11%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVSLTGTL 210
++ ++ +G P IG++G +LG+I+ + S +P L +G+++ T
Sbjct: 107 HQLNSGLRLLTLIGVISPLIGLLGTVLGLIEMFKGVAASTGSITPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIPQVA 257
G++++ L ++ + + + + + PQV+
Sbjct: 167 AGLLIALPAIAGAQLLGLWADKVMAKLEHTLNYVNLWLEGI--SLQHVSPQVS 217
>gi|237729936|ref|ZP_04560417.1| biopolymer transporter ExbB [Citrobacter sp. 30_2]
gi|226908542|gb|EEH94460.1| biopolymer transporter ExbB [Citrobacter sp. 30_2]
Length = 244
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + ++ +G P +G+ G + GI+ +
Sbjct: 97 LSEGSDDNEGIKERTGFRLERRVAAVGRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 156
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 157 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|121612706|ref|YP_999833.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 81-176]
gi|167004804|ref|ZP_02270562.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 81-176]
gi|87248976|gb|EAQ71938.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 81-176]
Length = 184
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS--QSPKILGTAIGV 204
++ ++ +S + + P IG+ G ++ I++ G L S I+ I
Sbjct: 81 LEIYKNLASRRASAGLTWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISE 140
Query: 205 SLTGTLLGIILS 216
+L T GI+++
Sbjct: 141 ALVATGCGILVA 152
>gi|325286942|ref|YP_004262732.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
gi|324322396|gb|ADY29861.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
Length = 230
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA---MGNLSQSPKI- 197
+I ++ + +Y+ K ++ + + P IG +G ++G+I A M + ++
Sbjct: 115 DINTAIENAGTLEVYKLEKNVSVLATVAGAAPMIGFLGTVIGMILAFHEMASAGGQAEMG 174
Query: 198 -LGTAIGVSLTGTLLGIILS 216
L + I ++T T+ G+++
Sbjct: 175 SLASGIYTAMTTTVAGLVVG 194
>gi|289435689|ref|YP_003465561.1| cell division protein, FtsW/RodA/SpoVE family [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289171933|emb|CBH28479.1| cell division protein, FtsW/RodA/SpoVE family [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 389
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 5 IGLFITILCIIGGFY-AMGGNPYILIQPFEIVIVAGAGLGGFVMANP--LKVIKDSGVSL 61
+G + + II G G IL+ F + V GA L V+ N L+ +
Sbjct: 168 LGTILVFIAIIIGMVFISGVTWKILVPLFSAITVIGATLIYLVLYNQAFLQKLGFEPYQF 227
Query: 62 LEIFGYKALGQDTYCDVLKLLYIL 85
I + +D D ++LL +
Sbjct: 228 KRITSWLRPEEDPLGDGMQLLRSM 251
>gi|269966082|ref|ZP_06180172.1| TonB system transport protein ExbB1 [Vibrio alginolyticus 40B]
gi|269829229|gb|EEZ83473.1| TonB system transport protein ExbB1 [Vibrio alginolyticus 40B]
Length = 232
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVSLTGTL 210
++ ++ +G P IG++G +LG+I + + +P L +G+++ T
Sbjct: 107 HQLHSGLRLLTLIGVISPLIGLLGTVLGLIDMFKGIAVSTGNITPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
G+I++ + ++ + + + +
Sbjct: 167 AGLIIALPAISGAQIIGLWADRVIAKLEHTLNYVNLWLEGI 207
>gi|257481748|ref|ZP_05635789.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 317
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 182 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 241
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 242 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 293
>gi|19705139|ref|NP_602634.1| biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713074|gb|AAL93933.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 187
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 138 ARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL--- 191
+ L ++ + + + +S + P +G++G + G+IKA ++
Sbjct: 68 ENKETLSALEEKGKEKAIERIKSLERNMWLLSLAANASPLLGLLGTVTGMIKAFNSIALN 127
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILS 216
+ +L I +L T G+I++
Sbjct: 128 GTGDAGVLAKGISEALYTTAGGLIVA 153
>gi|329895073|ref|ZP_08270818.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
gi|328922518|gb|EGG29856.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
Length = 213
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
++ G + ++M E I +++E + + + + P +G++G ++G+I
Sbjct: 74 HILAAGLMNAKAGRDIMKESIQDAGSQVVHELERFLNTLGTIAAIAPLMGLLGTVIGMIS 133
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + + L I +L T G+ ++
Sbjct: 134 VFTEIVTQGTGNAGALAGGISQALITTAAGLTVA 167
>gi|167572230|ref|ZP_02365104.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia oklahomensis C6786]
Length = 243
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 102 DDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKP 161
D+P+ + + +++ + D RM + + + + +D +
Sbjct: 78 DNPFLALALSGQEAADHHHQTQPHLHD--RMDVSDW-----VTRCLKDTMDEGIARMQGG 130
Query: 162 YHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G + P +G+ G + GI A+ + S + +G SL T G+ ++
Sbjct: 131 LAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 189
>gi|163754134|ref|ZP_02161257.1| putative biopolymer transport protein [Kordia algicida OT-1]
gi|161326348|gb|EDP97674.1| putative biopolymer transport protein [Kordia algicida OT-1]
Length = 231
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKI--- 197
+I ++ + +Y+ K ++ + + P IG +G ++G+I A ++ S
Sbjct: 115 EDINKAIENAGTLEVYKLEKNVSILATVAGAAPMIGFLGTVIGMILAFHEMATSGGQAEM 174
Query: 198 --LGTAIGVSLTGTLLGIILS 216
L I ++T T+ G+I+
Sbjct: 175 GSLAGGIYTAMTTTVAGLIVG 195
>gi|91228743|ref|ZP_01262654.1| ExbB-like protein [Vibrio alginolyticus 12G01]
gi|91187689|gb|EAS74010.1| ExbB-like protein [Vibrio alginolyticus 12G01]
gi|175362672|gb|ACB72439.1| periplasmic protein TonB1 [Vibrio alginolyticus]
Length = 232
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSPKILGTAIGVSLTGTL 210
++ ++ +G P IG++G +LG+I + + +P L +G+++ T
Sbjct: 107 HQLHSGLRLLTLIGVISPLIGLLGTVLGLIDMFKGIAVSTGNITPNDLADGLGLAMRTTA 166
Query: 211 LGIILSYS------LCNPLTSQIKSTRLKQHRLYIIVKKAL 245
G+I++ + ++ + + + +
Sbjct: 167 AGLIIALPAISGAQIIGLWADRVIAKLEHTLNYVNLWLEGI 207
>gi|307545153|ref|YP_003897632.1| biopolymer transporter TolQ [Halomonas elongata DSM 2581]
gi|307217177|emb|CBV42447.1| K03562 biopolymer transport protein TolQ [Halomonas elongata DSM
2581]
Length = 225
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGIILS 216
++ + S P IG+ G + GI+ + +LS + + I +L T +G+ +
Sbjct: 125 LATVASSSPYIGLFGTVWGIMGSFQSLSMAQQATLATVAPWIAEALIATAMGLFAA 180
>gi|296282705|ref|ZP_06860703.1| LacI family transcription regulator [Citromicrobium bathyomarinum
JL354]
Length = 342
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 28/172 (16%)
Query: 91 KGSRNETENHIDDPYNSTIFTSIPTVLENNELTTF------ICDYMRMIIVGNARSYEIE 144
R E+ I+ F + F +CD +R V + + +
Sbjct: 176 DAGRLVGEHFIERGRRKVAFLGH----ADEHYPEFAHRYQGLCDALRSNGVQPDPALQFD 231
Query: 145 NLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK--AMGNLSQSPKILGTAI 202
+ +E Y A + ES A V A +I AM L ++ + +
Sbjct: 232 AVTSDE---------AGYAAARRLIESGAAFDAVFAASDVIAIGAMRALDEAGLSVPGDV 282
Query: 203 GVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMNGAIP 254
V G I + PL++ ++ T+ ++ + L+A++ G+ P
Sbjct: 283 AV--VG-FDNIPAASMTHPPLSTIMQDTQGAG----ELLVETLLAHIEGSDP 327
>gi|154175493|ref|YP_001408807.1| transcription elongation factor GreA [Campylobacter curvus 525.92]
gi|112803733|gb|EAU01077.1| transcription elongation factor GreA (Transcript cleavage
factorgreA) [Campylobacter curvus 525.92]
Length = 135
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 5/109 (4%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILG 199
++ I I +S + + P IG+ G ++ I++ L S ++
Sbjct: 22 REKLNVCISIAEKNATSGLTWLSVIASTSPFIGLFGTVVSILETFSQLGNSANSSLGVIA 81
Query: 200 TAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAY 248
AI +L T GI ++ IK + + L+A
Sbjct: 82 PAISEALVATGAGIFVAIPAYT-FNLLIKRKAYELMSVIERQADVLVAL 129
>gi|148977422|ref|ZP_01814022.1| tol biopolymer transport system, TolQ protein [Vibrionales
bacterium SWAT-3]
gi|145963374|gb|EDK28639.1| tol biopolymer transport system, TolQ protein [Vibrionales
bacterium SWAT-3]
Length = 227
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ + L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHSFIALGEVKQATLAMVAPGIAEALIATAMGLFAA 186
>gi|93006729|ref|YP_581166.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
gi|92394407|gb|ABE75682.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
Length = 238
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ R E + + I + + + P IG+ G + GI A+ N+
Sbjct: 72 VADAATRRLITEQTLLKHIGRYRFASERGLPILGTTAAIAPFIGLFGTVWGIFHALRNIG 131
Query: 193 QSPKILGTAIGV----SLTGTLLGIILS 216
S + + +L T LGI ++
Sbjct: 132 MSGQAGLGQVAGPVGEALIMTGLGIAVA 159
>gi|114763046|ref|ZP_01442476.1| probable multidrug efflux transporter protein [Pelagibaca
bermudensis HTCC2601]
gi|114544370|gb|EAU47378.1| probable multidrug efflux transporter protein [Roseovarius sp.
HTCC2601]
Length = 1037
Score = 35.6 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 23/216 (10%), Positives = 63/216 (29%), Gaps = 6/216 (2%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLG---GFVMANPLKVIKDSG 58
S ++G+ + + + GG+ ++ + F I +V L +++ P+
Sbjct: 439 SALLGINVVLAAVFLPMAFFGGSTGVIYRQFSITMVTAMTLSLLVAIILSPPMSAKLLRP 498
Query: 59 VSLLEIFGYKALGQDTYCDVLKLLYILMYN-LKKGSRNETENHIDDPYNSTIFTSIPTVL 117
+ F + V + L+ + + + + +
Sbjct: 499 RDEMIRFAPARWFNRSLDRVTDAYGGGVKASLRAPAVMLGLLALVLGGAWWVNERLESSF 558
Query: 118 ENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGI 177
E + M + G +E + + E ++ E + +G G
Sbjct: 559 IPTEDQGVLI-TMVSLSEGATSQQTLETVKEVETYLLEEEGEAVEATFAALGFGFGGSGQ 617
Query: 178 VGAILGI-IKAMGNLSQSPKILGTAIGVSLTGTLLG 212
A++ + ++ P + + G
Sbjct: 618 NSAMVFVKLRDFEARQDDPALSAANVSARANARFAG 653
>gi|327542814|gb|EGF29275.1| biopolymer transport protein [Rhodopirellula baltica WH47]
Length = 499
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSP- 195
++ + + + D + I + ++P +G +G ++GI + +G L +
Sbjct: 199 GDLPQDLREMSERDADAAHD----SFGLIRIIVWAIPMLGFLGTVIGITQTLGGLDFTDG 254
Query: 196 ----KILGTAIGVSLTGTLLGIILS 216
L + + V+ T LG++LS
Sbjct: 255 TAAVDRLKSGLYVAFDTTALGLVLS 279
>gi|260170937|ref|ZP_05757349.1| putative tolQ-type transport protein [Bacteroides sp. D2]
gi|315919263|ref|ZP_07915503.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313693138|gb|EFS29973.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 461
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 158 KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS-----QSPKILGTAIGVSLTGTLLG 212
L + +S + P IG++G ++G+I+A G ++ IL +I +L T G
Sbjct: 353 HLARIYPLSVIASLAPLIGLLGTVVGMIEAFGLVALYGDEGGASILSDSISKALITTAAG 412
Query: 213 IILS 216
+I++
Sbjct: 413 LIIA 416
>gi|149200004|ref|ZP_01877030.1| putative biopolymer transport protein [Lentisphaera araneosa
HTCC2155]
gi|149136877|gb|EDM25304.1| putative biopolymer transport protein [Lentisphaera araneosa
HTCC2155]
Length = 224
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQS-----PKILGTAIGVSLTGTLLGIILS 216
+S + + P IG++G +LG+++A L Q P L I ++ T G+I+
Sbjct: 132 VSDIAKIAPMIGLLGTVLGMMQAFSGLKQDFGAVKPIALADGIAQAMVTTAAGLIVG 188
>gi|323698928|ref|ZP_08110840.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323458860|gb|EGB14725.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 196
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+S + P +G++G +LG+I A L +L I +L T G+ ++
Sbjct: 106 LSTAAATAPLMGLLGTVLGMINAFSRLASSADVDITVLAGGIWQALLTTAAGLCIA 161
>gi|188997280|ref|YP_001931531.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932347|gb|ACD66977.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
Length = 147
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILGTAIGVSLTGTLLGIILS 216
++ G + P IG+ G +LGIIKA +L+ S + ++ I +L T +G+ ++
Sbjct: 65 ILATFGNNAPFIGLFGTVLGIIKAFHSLATSTEFGVRVVMAGISEALVATAMGLFVA 121
>gi|71066218|ref|YP_264945.1| MotA/TolQ/ExbB proton channel [Psychrobacter arcticus 273-4]
gi|71039203|gb|AAZ19511.1| MotA/TolQ/ExbB proton channel [Psychrobacter arcticus 273-4]
Length = 193
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ R E + + I + + + P IG+ G + GI A+ N+
Sbjct: 63 VADAATRRLITEQTLLKHIGRYRFSSERGLPILGTTAAIAPFIGLFGTVWGIFHALHNIG 122
Query: 193 QSPKILGTAIGV----SLTGTLLGIILS 216
S + + +L T LGI ++
Sbjct: 123 MSGQAGLGQVAGPVGEALIMTGLGIAVA 150
>gi|86151285|ref|ZP_01069500.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 260.94]
gi|86154031|ref|ZP_01072232.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88597685|ref|ZP_01100918.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 84-25]
gi|153952561|ref|YP_001397363.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. doylei 269.97]
gi|157414422|ref|YP_001481678.1| ExbB/TolQ family transport protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|205356484|ref|ZP_03223248.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|218561790|ref|YP_002343569.1| putative MotA/TolQ/ExbB proton channel family protein
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|283955553|ref|ZP_06373048.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni 1336]
gi|315123711|ref|YP_004065715.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841632|gb|EAQ58879.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 260.94]
gi|85842445|gb|EAQ59659.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88189989|gb|EAQ93965.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 84-25]
gi|112359496|emb|CAL34280.1| putative MotA/TolQ/ExbB proton channel family protein
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|152940007|gb|ABS44748.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. doylei 269.97]
gi|157385386|gb|ABV51701.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|205345671|gb|EDZ32310.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|283793014|gb|EFC31788.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni 1336]
gi|307747066|gb|ADN90336.1| ExbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni M1]
gi|315017433|gb|ADT65526.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315926953|gb|EFV06315.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
gi|315929750|gb|EFV08921.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 305]
Length = 184
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS--QSPKILGTAIGV 204
++ ++ +S + + P IG+ G ++ I++ G L S I+ I
Sbjct: 81 LEIYKNLASRRASAGLTWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISE 140
Query: 205 SLTGTLLGIILS 216
+L T GI+++
Sbjct: 141 ALVATGCGILVA 152
>gi|330964243|gb|EGH64503.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 318
Score = 35.6 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 183 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 242
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 243 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 294
>gi|320322263|gb|EFW78359.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331912|gb|EFW87850.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 314
Score = 35.6 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 179 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 238
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 239 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 290
>gi|301325646|ref|ZP_07219110.1| TonB-system energizer ExbB [Escherichia coli MS 78-1]
gi|300847564|gb|EFK75324.1| TonB-system energizer ExbB [Escherichia coli MS 78-1]
gi|323966535|gb|EGB61968.1| tonB-system energizer ExbB [Escherichia coli M863]
gi|327251789|gb|EGE63475.1| tonB-system energizer ExbB [Escherichia coli STEC_7v]
Length = 239
Score = 35.6 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 92 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 151
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 152 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|296283274|ref|ZP_06861272.1| TolQ, tolQ protein [Citromicrobium bathyomarinum JL354]
Length = 237
Score = 35.6 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
I +MD + ++ +G P +G+ G + GI+ + + + S +
Sbjct: 120 RIAAVMDSHVAEEADRMANRLTFLATLGSVAPFVGLFGTVWGIMNSFFQIGAQNNSSLAV 179
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G+ +
Sbjct: 180 VAPGISEALFATAIGLFAA 198
>gi|86146490|ref|ZP_01064813.1| TolQ protein [Vibrio sp. MED222]
gi|218709107|ref|YP_002416728.1| TolQ protein [Vibrio splendidus LGP32]
gi|85835753|gb|EAQ53888.1| TolQ protein [Vibrio sp. MED222]
gi|218322126|emb|CAV18240.1| TolQ protein [Vibrio splendidus LGP32]
Length = 227
Score = 35.6 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P IG+ G + GI+ + L + + ++ I +L T +G+ +
Sbjct: 131 LATVGSISPYIGLFGTVWGIMHSFIALGEVKQATLAMVAPGIAEALIATAMGLFAA 186
>gi|301019984|ref|ZP_07184117.1| TonB-system energizer ExbB [Escherichia coli MS 196-1]
gi|331664621|ref|ZP_08365527.1| TonB-system energizer ExbB [Escherichia coli TA143]
gi|299881990|gb|EFI90201.1| TonB-system energizer ExbB [Escherichia coli MS 196-1]
gi|331058552|gb|EGI30533.1| TonB-system energizer ExbB [Escherichia coli TA143]
Length = 244
Score = 35.6 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 97 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 156
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 157 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|330873188|gb|EGH07337.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 302
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 167 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 226
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 227 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 278
>gi|311695028|gb|ADP97901.1| biopolymer transport protein [marine bacterium HP15]
Length = 235
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSP 195
EIE M+E + ++ K ++ + +G++G I+G+I A + +Q
Sbjct: 92 EEIEYAMEEGLLDVMPRLEKRTQYLATLANIATLLGLLGTIIGLIAAFTAVAAADPAQKA 151
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +I V++ T G++ + + + S +++ + + +
Sbjct: 152 SLLSQSISVAMNTTAFGLMSAIPMLL-IHSLLQTKTNEIVDSFEM 195
>gi|301017299|ref|ZP_07182063.1| TonB-system energizer ExbB [Escherichia coli MS 69-1]
gi|300400272|gb|EFJ83810.1| TonB-system energizer ExbB [Escherichia coli MS 69-1]
Length = 239
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 92 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 151
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 152 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|150010300|ref|YP_001305043.1| MotA/TolQ/ExbB proton channel family protein biopolymer transport
protein [Parabacteroides distasonis ATCC 8503]
gi|255012434|ref|ZP_05284560.1| MotA/TolQ/ExbB proton channel family protein, putative biopolymer
transport protein [Bacteroides sp. 2_1_7]
gi|256839151|ref|ZP_05544661.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262382415|ref|ZP_06075552.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|149938724|gb|ABR45421.1| MotA/TolQ/ExbB proton channel family protein, putative biopolymer
transport protein [Parabacteroides distasonis ATCC 8503]
gi|256740070|gb|EEU53394.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262295293|gb|EEY83224.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 247
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+I A + Q SP ++ + V+L T+ G+I
Sbjct: 145 EKNMSWITLFIAMAPSLGFLGTVVGMIMAFDKIEQVGDISPTVVAGGMKVALITTVGGLI 204
Query: 215 LS 216
++
Sbjct: 205 VA 206
>gi|332091439|gb|EGI96524.1| tonB-system energizer ExbB [Shigella boydii 3594-74]
Length = 239
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 92 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 151
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 152 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|82545391|ref|YP_409338.1| biopolymer transport protein ExbB [Shigella boydii Sb227]
gi|187730205|ref|YP_001881769.1| biopolymer transport protein ExbB [Shigella boydii CDC 3083-94]
gi|81246802|gb|ABB67510.1| ExbB [Shigella boydii Sb227]
gi|187427197|gb|ACD06471.1| tonB-system energizer ExbB [Shigella boydii CDC 3083-94]
gi|320175247|gb|EFW50355.1| MotA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
CDC 74-1112]
gi|320187488|gb|EFW62175.1| MotA/TolQ/ExbB proton channel family protein [Shigella flexneri CDC
796-83]
Length = 244
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 97 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 156
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 157 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|24114312|ref|NP_708822.1| biopolymer transport protein ExbB [Shigella flexneri 2a str. 301]
gi|30064360|ref|NP_838531.1| biopolymer transport protein ExbB [Shigella flexneri 2a str. 2457T]
gi|24053470|gb|AAN44529.1| enterochelin transporter (uptake) [Shigella flexneri 2a str. 301]
gi|30042617|gb|AAP18341.1| enterochelin transporter (uptake) [Shigella flexneri 2a str. 2457T]
gi|281602396|gb|ADA75380.1| Biopolymer transport protein exbB [Shigella flexneri 2002017]
Length = 244
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 97 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 156
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 157 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|320354284|ref|YP_004195623.1| cell division and transport-associated protein TolQ [Desulfobulbus
propionicus DSM 2032]
gi|320122786|gb|ADW18332.1| Cell division and transport-associated protein TolQ [Desulfobulbus
propionicus DSM 2032]
Length = 230
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 155 LYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTL 210
++ G + P IG+ G + GI+ + ++ + S ++ I +L T
Sbjct: 125 SDRLASYISVLATTGSATPFIGLFGTVWGIMASFQSIGERGSASLAVVAPGISEALVATA 184
Query: 211 LGIILS 216
G+ ++
Sbjct: 185 AGLAVA 190
>gi|313648123|gb|EFS12569.1| tonB-system energizer ExbB [Shigella flexneri 2a str. 2457T]
gi|332752681|gb|EGJ83066.1| tonB-system energizer ExbB [Shigella flexneri K-671]
gi|332753066|gb|EGJ83450.1| tonB-system energizer ExbB [Shigella flexneri 4343-70]
gi|332754574|gb|EGJ84940.1| tonB-system energizer ExbB [Shigella flexneri 2747-71]
gi|332765487|gb|EGJ95705.1| tonB-system energizer ExbB [Shigella flexneri 2930-71]
gi|333000327|gb|EGK19910.1| tonB-system energizer ExbB [Shigella flexneri K-218]
gi|333014917|gb|EGK34262.1| tonB-system energizer ExbB [Shigella flexneri K-304]
Length = 239
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 92 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 151
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 152 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|301643625|ref|ZP_07243666.1| TonB-system energizer ExbB [Escherichia coli MS 146-1]
gi|301078009|gb|EFK92815.1| TonB-system energizer ExbB [Escherichia coli MS 146-1]
Length = 239
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 92 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 151
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 152 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|298484814|ref|ZP_07002914.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298160668|gb|EFI01689.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 317
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 182 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 241
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + ++ ++V
Sbjct: 242 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 293
>gi|110180256|gb|ABG54367.1| ExbB [Klebsiella pneumoniae]
Length = 200
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + + ++ +G P +G+ G + GI+ + ++Q + ++ I
Sbjct: 115 LERRVAAVGRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGI 174
Query: 203 GVSLTGTLLGIILS 216
+L T +G+ +
Sbjct: 175 AEALLATAIGLFAA 188
>gi|108756839|ref|YP_629081.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108460719|gb|ABF85904.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 226
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPKILG--- 199
+E ++ + + + +G + P IG+ G +LGIIKA +L + G
Sbjct: 107 VEQVIASTLSRERPRYERFLSYLGTLGNNAPFIGLFGTVLGIIKAFNDLGKMNAQGGGGA 166
Query: 200 ------TAIGVSLTGTLLGIILS 216
I +L T +G+ ++
Sbjct: 167 MQQTVMAGISEALVATAVGLAVA 189
>gi|15803550|ref|NP_289583.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 EDL933]
gi|15833144|ref|NP_311917.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
Sakai]
gi|16130904|ref|NP_417479.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. MG1655]
gi|74313549|ref|YP_311968.1| biopolymer transport protein ExbB [Shigella sonnei Ss046]
gi|82778226|ref|YP_404575.1| biopolymer transport protein ExbB [Shigella dysenteriae Sd197]
gi|89109778|ref|AP_003558.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. W3110]
gi|91212418|ref|YP_542404.1| biopolymer transport protein ExbB [Escherichia coli UTI89]
gi|117625309|ref|YP_854510.1| biopolymer transport protein ExbB [Escherichia coli APEC O1]
gi|157156078|ref|YP_001464472.1| biopolymer transport protein ExbB [Escherichia coli E24377A]
gi|168747488|ref|ZP_02772510.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4113]
gi|168753971|ref|ZP_02778978.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4401]
gi|168760162|ref|ZP_02785169.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4501]
gi|168767025|ref|ZP_02792032.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4486]
gi|168773341|ref|ZP_02798348.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4196]
gi|168781878|ref|ZP_02806885.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4076]
gi|168785876|ref|ZP_02810883.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC869]
gi|168797594|ref|ZP_02822601.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC508]
gi|170018738|ref|YP_001723692.1| biopolymer transport protein ExbB [Escherichia coli ATCC 8739]
gi|170082551|ref|YP_001731871.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170680008|ref|YP_001745271.1| biopolymer transport protein ExbB [Escherichia coli SMS-3-5]
gi|188492681|ref|ZP_02999951.1| tonB-system energizer ExbB [Escherichia coli 53638]
gi|191167568|ref|ZP_03029380.1| TonB-system energizer ExbB [Escherichia coli B7A]
gi|191172531|ref|ZP_03034071.1| TonB-system energizer ExbB [Escherichia coli F11]
gi|193062063|ref|ZP_03043159.1| TonB-system energizer ExbB [Escherichia coli E22]
gi|193067250|ref|ZP_03048218.1| TonB-system energizer ExbB [Escherichia coli E110019]
gi|194426357|ref|ZP_03058912.1| TonB-system energizer ExbB [Escherichia coli B171]
gi|194431783|ref|ZP_03064074.1| TonB-system energizer ExbB [Shigella dysenteriae 1012]
gi|194436750|ref|ZP_03068850.1| TonB-system energizer ExbB [Escherichia coli 101-1]
gi|195937151|ref|ZP_03082533.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
EC4024]
gi|208807245|ref|ZP_03249582.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4206]
gi|208813577|ref|ZP_03254906.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4045]
gi|208818524|ref|ZP_03258844.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4042]
gi|209397203|ref|YP_002272484.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4115]
gi|209920481|ref|YP_002294565.1| biopolymer transport protein ExbB [Escherichia coli SE11]
gi|215488331|ref|YP_002330762.1| biopolymer transport protein ExbB [Escherichia coli O127:H6 str.
E2348/69]
gi|217327909|ref|ZP_03443992.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. TW14588]
gi|218555579|ref|YP_002388492.1| biopolymer transport protein ExbB [Escherichia coli IAI1]
gi|218560080|ref|YP_002392993.1| biopolymer transport protein ExbB [Escherichia coli S88]
gi|218691296|ref|YP_002399508.1| biopolymer transport protein ExbB [Escherichia coli ED1a]
gi|218696715|ref|YP_002404382.1| biopolymer transport protein ExbB [Escherichia coli 55989]
gi|218701779|ref|YP_002409408.1| biopolymer transport protein ExbB [Escherichia coli IAI39]
gi|218706634|ref|YP_002414153.1| biopolymer transport protein ExbB [Escherichia coli UMN026]
gi|227887711|ref|ZP_04005516.1| biopolymer transport protein ExbB [Escherichia coli 83972]
gi|237706248|ref|ZP_04536729.1| biopolymer transporter ExbB [Escherichia sp. 3_2_53FAA]
gi|238902121|ref|YP_002927917.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BW2952]
gi|253772156|ref|YP_003034987.1| biopolymer transporter ExbB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254038176|ref|ZP_04872234.1| biopolymer transporter ExbB [Escherichia sp. 1_1_43]
gi|254162957|ref|YP_003046065.1| biopolymer transport protein ExbB [Escherichia coli B str. REL606]
gi|254794961|ref|YP_003079798.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
TW14359]
gi|256019072|ref|ZP_05432937.1| biopolymer transport protein ExbB [Shigella sp. D9]
gi|256024410|ref|ZP_05438275.1| biopolymer transport protein ExbB [Escherichia sp. 4_1_40B]
gi|260845765|ref|YP_003223543.1| membrane spanning protein ExbB [Escherichia coli O103:H2 str.
12009]
gi|260857144|ref|YP_003231035.1| membrane spanning protein ExbB [Escherichia coli O26:H11 str.
11368]
gi|260869765|ref|YP_003236167.1| membrane spanning protein ExbB [Escherichia coli O111:H- str.
11128]
gi|261228020|ref|ZP_05942301.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli O157:H7 str. FRIK2000]
gi|261254877|ref|ZP_05947410.1| membrane spanning protein ExbB [Escherichia coli O157:H7 str.
FRIK966]
gi|291284387|ref|YP_003501205.1| Biopolymer transport protein exbB [Escherichia coli O55:H7 str.
CB9615]
gi|293406623|ref|ZP_06650549.1| biopolymer transporter ExbB [Escherichia coli FVEC1412]
gi|293412383|ref|ZP_06655106.1| tonB-system energizer ExbB [Escherichia coli B354]
gi|293416450|ref|ZP_06659089.1| tonB-system energizer ExbB [Escherichia coli B185]
gi|293449353|ref|ZP_06663774.1| tonB-system energizer ExbB [Escherichia coli B088]
gi|298382362|ref|ZP_06991959.1| biopolymer transporter exbB [Escherichia coli FVEC1302]
gi|307139696|ref|ZP_07499052.1| biopolymer transport protein ExbB [Escherichia coli H736]
gi|307310361|ref|ZP_07590009.1| tonB-system energizer ExbB [Escherichia coli W]
gi|331643708|ref|ZP_08344839.1| TonB-system energizer ExbB [Escherichia coli H736]
gi|331648796|ref|ZP_08349884.1| TonB-system energizer ExbB [Escherichia coli M605]
gi|331669972|ref|ZP_08370817.1| TonB-system energizer ExbB [Escherichia coli TA271]
gi|331674557|ref|ZP_08375317.1| TonB-system energizer ExbB [Escherichia coli TA280]
gi|331679081|ref|ZP_08379753.1| TonB-system energizer ExbB [Escherichia coli H591]
gi|332280174|ref|ZP_08392587.1| membrane spanning protein in TonB-ExbB-ExbD complex [Shigella sp.
D9]
gi|78099974|sp|P0ABU8|EXBB_ECO57 RecName: Full=Biopolymer transport protein exbB
gi|78099975|sp|P0ABU7|EXBB_ECOLI RecName: Full=Biopolymer transport protein exbB
gi|12517572|gb|AAG58142.1|AE005530_8 uptake of enterochelin; tonB-dependent uptake of B colicins
[Escherichia coli O157:H7 str. EDL933]
gi|882535|gb|AAA69173.1| exbB [Escherichia coli str. K-12 substr. MG1655]
gi|1789381|gb|AAC76042.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. MG1655]
gi|13363362|dbj|BAB37313.1| biopolymer transport ExbB protein [Escherichia coli O157:H7 str.
Sakai]
gi|73857026|gb|AAZ89733.1| uptake of enterochelin; tonB-dependent uptake of B colicins
[Shigella sonnei Ss046]
gi|81242374|gb|ABB63084.1| ExbB [Shigella dysenteriae Sd197]
gi|85675811|dbj|BAE77064.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K12 substr. W3110]
gi|91073992|gb|ABE08873.1| TonB-dependent enterochelin uptake protein [Escherichia coli UTI89]
gi|115514433|gb|ABJ02508.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli APEC O1]
gi|157078108|gb|ABV17816.1| TonB-system energizer ExbB [Escherichia coli E24377A]
gi|169753666|gb|ACA76365.1| tonB-system energizer ExbB [Escherichia coli ATCC 8739]
gi|169890386|gb|ACB04093.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170517726|gb|ACB15904.1| TonB-system energizer ExbB [Escherichia coli SMS-3-5]
gi|187770997|gb|EDU34841.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4196]
gi|188017796|gb|EDU55918.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4113]
gi|188487880|gb|EDU62983.1| tonB-system energizer ExbB [Escherichia coli 53638]
gi|189000633|gb|EDU69619.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4076]
gi|189358565|gb|EDU76984.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4401]
gi|189363812|gb|EDU82231.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4486]
gi|189369243|gb|EDU87659.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4501]
gi|189373966|gb|EDU92382.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC869]
gi|189379738|gb|EDU98154.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC508]
gi|190902425|gb|EDV62162.1| TonB-system energizer ExbB [Escherichia coli B7A]
gi|190907199|gb|EDV66798.1| TonB-system energizer ExbB [Escherichia coli F11]
gi|192932283|gb|EDV84881.1| TonB-system energizer ExbB [Escherichia coli E22]
gi|192959207|gb|EDV89642.1| TonB-system energizer ExbB [Escherichia coli E110019]
gi|194415665|gb|EDX31932.1| TonB-system energizer ExbB [Escherichia coli B171]
gi|194420139|gb|EDX36217.1| TonB-system energizer ExbB [Shigella dysenteriae 1012]
gi|194424232|gb|EDX40219.1| TonB-system energizer ExbB [Escherichia coli 101-1]
gi|208727046|gb|EDZ76647.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4206]
gi|208734854|gb|EDZ83541.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4045]
gi|208738647|gb|EDZ86329.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4042]
gi|209158603|gb|ACI36036.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4115]
gi|209759718|gb|ACI78171.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759720|gb|ACI78172.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759722|gb|ACI78173.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759724|gb|ACI78174.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759726|gb|ACI78175.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209913740|dbj|BAG78814.1| biopolymer transport protein [Escherichia coli SE11]
gi|215266403|emb|CAS10841.1| membrane spanning protein ExbB in TonB-ExbB-ExbD complex
[Escherichia coli O127:H6 str. E2348/69]
gi|217320276|gb|EEC28701.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. TW14588]
gi|218353447|emb|CAU99531.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli 55989]
gi|218362347|emb|CAQ99969.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli IAI1]
gi|218366849|emb|CAR04619.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli S88]
gi|218371765|emb|CAR19618.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli IAI39]
gi|218428860|emb|CAR09805.2| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli ED1a]
gi|218433731|emb|CAR14648.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli UMN026]
gi|222034727|emb|CAP77469.1| biopolymer transport exbB protein [Escherichia coli LF82]
gi|226839800|gb|EEH71821.1| biopolymer transporter ExbB [Escherichia sp. 1_1_43]
gi|226899288|gb|EEH85547.1| biopolymer transporter ExbB [Escherichia sp. 3_2_53FAA]
gi|227835107|gb|EEJ45573.1| biopolymer transport protein ExbB [Escherichia coli 83972]
gi|238861747|gb|ACR63745.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BW2952]
gi|242378560|emb|CAQ33347.1| ExbB protein; uptake of enterochelin; tonB-dependent uptake of B
colicins, subunit of TonB energy transducing system,
vitamin B12 outer membrane transport complex, vitamin
B12 transport system, Outer Membrane Ferric Enterobactin
Transport System, Ferric Enterobactin Transport System,
Outer Membrane Ferrichrome Transport System, ferrichrome
uptake system, Outer Membrane Ferric Citrate Transport
System and ferric dicitrate uptake system [Escherichia
coli BL21(DE3)]
gi|253323200|gb|ACT27802.1| tonB-system energizer ExbB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974858|gb|ACT40529.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli B str. REL606]
gi|253979014|gb|ACT44684.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BL21(DE3)]
gi|254594361|gb|ACT73722.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli O157:H7 str. TW14359]
gi|257755793|dbj|BAI27295.1| membrane spanning protein ExbB [Escherichia coli O26:H11 str.
11368]
gi|257760912|dbj|BAI32409.1| membrane spanning protein ExbB [Escherichia coli O103:H2 str.
12009]
gi|257766121|dbj|BAI37616.1| membrane spanning protein ExbB [Escherichia coli O111:H- str.
11128]
gi|260447955|gb|ACX38377.1| tonB-system energizer ExbB [Escherichia coli DH1]
gi|281180045|dbj|BAI56375.1| biopolymer transport protein [Escherichia coli SE15]
gi|284923031|emb|CBG36124.1| biopolymer transport protein [Escherichia coli 042]
gi|290764260|gb|ADD58221.1| Biopolymer transport protein exbB [Escherichia coli O55:H7 str.
CB9615]
gi|291322443|gb|EFE61872.1| tonB-system energizer ExbB [Escherichia coli B088]
gi|291426629|gb|EFE99661.1| biopolymer transporter ExbB [Escherichia coli FVEC1412]
gi|291431806|gb|EFF04789.1| tonB-system energizer ExbB [Escherichia coli B185]
gi|291469154|gb|EFF11645.1| tonB-system energizer ExbB [Escherichia coli B354]
gi|294491817|gb|ADE90573.1| TonB-system energizer ExbB [Escherichia coli IHE3034]
gi|298277502|gb|EFI19018.1| biopolymer transporter exbB [Escherichia coli FVEC1302]
gi|306909256|gb|EFN39751.1| tonB-system energizer ExbB [Escherichia coli W]
gi|307625392|gb|ADN69696.1| biopolymer transport protein ExbB [Escherichia coli UM146]
gi|309703439|emb|CBJ02779.1| biopolymer transport protein [Escherichia coli ETEC H10407]
gi|312947565|gb|ADR28392.1| biopolymer transport protein ExbB [Escherichia coli O83:H1 str. NRG
857C]
gi|315062322|gb|ADT76649.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli W]
gi|315137602|dbj|BAJ44761.1| biopolymer transport protein exbB [Escherichia coli DH1]
gi|320180965|gb|EFW55886.1| MotA/TolQ/ExbB proton channel family protein [Shigella boydii ATCC
9905]
gi|320189361|gb|EFW64020.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. EC1212]
gi|320195155|gb|EFW69784.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
WV_060327]
gi|320201922|gb|EFW76497.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
EC4100B]
gi|320640082|gb|EFX09654.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
G5101]
gi|320645380|gb|EFX14389.1| biopolymer transport protein ExbB [Escherichia coli O157:H- str.
493-89]
gi|320650693|gb|EFX19150.1| biopolymer transport protein ExbB [Escherichia coli O157:H- str. H
2687]
gi|320656387|gb|EFX24294.1| biopolymer transport protein ExbB [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661760|gb|EFX29168.1| biopolymer transport protein ExbB [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666911|gb|EFX33887.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
LSU-61]
gi|323377092|gb|ADX49360.1| tonB-system energizer ExbB [Escherichia coli KO11]
gi|326337715|gb|EGD61549.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1125]
gi|326347279|gb|EGD71004.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1044]
gi|330909062|gb|EGH37576.1| motA/TolQ/ExbB proton channel family protein [Escherichia coli
AA86]
gi|331037179|gb|EGI09403.1| TonB-system energizer ExbB [Escherichia coli H736]
gi|331042543|gb|EGI14685.1| TonB-system energizer ExbB [Escherichia coli M605]
gi|331062885|gb|EGI34799.1| TonB-system energizer ExbB [Escherichia coli TA271]
gi|331068651|gb|EGI40046.1| TonB-system energizer ExbB [Escherichia coli TA280]
gi|331073146|gb|EGI44469.1| TonB-system energizer ExbB [Escherichia coli H591]
gi|332102526|gb|EGJ05872.1| membrane spanning protein in TonB-ExbB-ExbD complex [Shigella sp.
D9]
Length = 244
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 97 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 156
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 157 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|110643244|ref|YP_670974.1| biopolymer transport protein ExbB [Escherichia coli 536]
gi|110806907|ref|YP_690427.1| biopolymer transport protein ExbB [Shigella flexneri 5 str. 8401]
gi|300818770|ref|ZP_07098976.1| TonB-system energizer ExbB [Escherichia coli MS 107-1]
gi|300821591|ref|ZP_07101737.1| TonB-system energizer ExbB [Escherichia coli MS 119-7]
gi|300901385|ref|ZP_07119471.1| TonB-system energizer ExbB [Escherichia coli MS 198-1]
gi|300905865|ref|ZP_07123598.1| TonB-system energizer ExbB [Escherichia coli MS 84-1]
gi|300916885|ref|ZP_07133588.1| TonB-system energizer ExbB [Escherichia coli MS 115-1]
gi|300923665|ref|ZP_07139692.1| TonB-system energizer ExbB [Escherichia coli MS 182-1]
gi|300931892|ref|ZP_07147189.1| TonB-system energizer ExbB [Escherichia coli MS 187-1]
gi|300935666|ref|ZP_07150638.1| TonB-system energizer ExbB [Escherichia coli MS 21-1]
gi|300950785|ref|ZP_07164672.1| TonB-system energizer ExbB [Escherichia coli MS 116-1]
gi|300958391|ref|ZP_07170531.1| TonB-system energizer ExbB [Escherichia coli MS 175-1]
gi|300973363|ref|ZP_07172163.1| TonB-system energizer ExbB [Escherichia coli MS 45-1]
gi|300993145|ref|ZP_07180231.1| TonB-system energizer ExbB [Escherichia coli MS 200-1]
gi|301048179|ref|ZP_07195215.1| TonB-system energizer ExbB [Escherichia coli MS 185-1]
gi|301304190|ref|ZP_07210306.1| TonB-system energizer ExbB [Escherichia coli MS 124-1]
gi|309785160|ref|ZP_07679791.1| tonB-system energizer ExbB [Shigella dysenteriae 1617]
gi|309793571|ref|ZP_07687997.1| TonB-system energizer ExbB [Escherichia coli MS 145-7]
gi|312968660|ref|ZP_07782869.1| tonB-system energizer ExbB [Escherichia coli 2362-75]
gi|312972731|ref|ZP_07786904.1| tonB-system energizer ExbB [Escherichia coli 1827-70]
gi|331659287|ref|ZP_08360229.1| TonB-system energizer ExbB [Escherichia coli TA206]
gi|331684650|ref|ZP_08385242.1| TonB-system energizer ExbB [Escherichia coli H299]
gi|110344836|gb|ABG71073.1| biopolymer transport ExbB protein [Escherichia coli 536]
gi|110616455|gb|ABF05122.1| Biopolymer transport exbB protein [Shigella flexneri 5 str. 8401]
gi|300299937|gb|EFJ56322.1| TonB-system energizer ExbB [Escherichia coli MS 185-1]
gi|300305160|gb|EFJ59680.1| TonB-system energizer ExbB [Escherichia coli MS 200-1]
gi|300314900|gb|EFJ64684.1| TonB-system energizer ExbB [Escherichia coli MS 175-1]
gi|300355157|gb|EFJ71027.1| TonB-system energizer ExbB [Escherichia coli MS 198-1]
gi|300402334|gb|EFJ85872.1| TonB-system energizer ExbB [Escherichia coli MS 84-1]
gi|300410792|gb|EFJ94330.1| TonB-system energizer ExbB [Escherichia coli MS 45-1]
gi|300415855|gb|EFJ99165.1| TonB-system energizer ExbB [Escherichia coli MS 115-1]
gi|300420032|gb|EFK03343.1| TonB-system energizer ExbB [Escherichia coli MS 182-1]
gi|300449955|gb|EFK13575.1| TonB-system energizer ExbB [Escherichia coli MS 116-1]
gi|300459139|gb|EFK22632.1| TonB-system energizer ExbB [Escherichia coli MS 21-1]
gi|300460315|gb|EFK23808.1| TonB-system energizer ExbB [Escherichia coli MS 187-1]
gi|300525729|gb|EFK46798.1| TonB-system energizer ExbB [Escherichia coli MS 119-7]
gi|300528555|gb|EFK49617.1| TonB-system energizer ExbB [Escherichia coli MS 107-1]
gi|300840603|gb|EFK68363.1| TonB-system energizer ExbB [Escherichia coli MS 124-1]
gi|307555099|gb|ADN47874.1| TonB-dependent enterochelin uptake protein [Escherichia coli ABU
83972]
gi|308122528|gb|EFO59790.1| TonB-system energizer ExbB [Escherichia coli MS 145-7]
gi|308926280|gb|EFP71756.1| tonB-system energizer ExbB [Shigella dysenteriae 1617]
gi|310332673|gb|EFP99886.1| tonB-system energizer ExbB [Escherichia coli 1827-70]
gi|312286878|gb|EFR14789.1| tonB-system energizer ExbB [Escherichia coli 2362-75]
gi|315256907|gb|EFU36875.1| TonB-system energizer ExbB [Escherichia coli MS 85-1]
gi|315288761|gb|EFU48159.1| TonB-system energizer ExbB [Escherichia coli MS 110-3]
gi|315295040|gb|EFU54377.1| TonB-system energizer ExbB [Escherichia coli MS 153-1]
gi|315297741|gb|EFU57018.1| TonB-system energizer ExbB [Escherichia coli MS 16-3]
gi|315615009|gb|EFU95647.1| tonB-system energizer ExbB [Escherichia coli 3431]
gi|323154705|gb|EFZ40904.1| tonB-system energizer ExbB [Escherichia coli EPECa14]
gi|323163060|gb|EFZ48893.1| tonB-system energizer ExbB [Escherichia coli E128010]
gi|323168150|gb|EFZ53837.1| tonB-system energizer ExbB [Shigella sonnei 53G]
gi|323178714|gb|EFZ64290.1| tonB-system energizer ExbB [Escherichia coli 1180]
gi|323183595|gb|EFZ68992.1| tonB-system energizer ExbB [Escherichia coli 1357]
gi|323935990|gb|EGB32285.1| tonB-system energizer ExbB [Escherichia coli E1520]
gi|323941893|gb|EGB38072.1| tonB-system energizer ExbB [Escherichia coli E482]
gi|323946747|gb|EGB42767.1| tonB-system energizer ExbB [Escherichia coli H120]
gi|323951473|gb|EGB47348.1| tonB-system energizer ExbB [Escherichia coli H252]
gi|323957845|gb|EGB53559.1| tonB-system energizer ExbB [Escherichia coli H263]
gi|323960945|gb|EGB56564.1| tonB-system energizer ExbB [Escherichia coli H489]
gi|323971866|gb|EGB67091.1| tonB-system energizer ExbB [Escherichia coli TA007]
gi|323978920|gb|EGB74000.1| tonB-system energizer ExbB [Escherichia coli TW10509]
gi|324005413|gb|EGB74632.1| TonB-system energizer ExbB [Escherichia coli MS 57-2]
gi|324011898|gb|EGB81117.1| TonB-system energizer ExbB [Escherichia coli MS 60-1]
gi|324018149|gb|EGB87368.1| TonB-system energizer ExbB [Escherichia coli MS 117-3]
gi|324119620|gb|EGC13501.1| tonB-system energizer ExbB [Escherichia coli E1167]
gi|331053869|gb|EGI25898.1| TonB-system energizer ExbB [Escherichia coli TA206]
gi|331078265|gb|EGI49471.1| TonB-system energizer ExbB [Escherichia coli H299]
gi|332088502|gb|EGI93619.1| tonB-system energizer ExbB [Shigella dysenteriae 155-74]
gi|332998949|gb|EGK18540.1| tonB-system energizer ExbB [Shigella flexneri VA-6]
gi|332999759|gb|EGK19343.1| tonB-system energizer ExbB [Shigella flexneri K-272]
gi|333015625|gb|EGK34964.1| tonB-system energizer ExbB [Shigella flexneri K-227]
Length = 239
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 92 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 151
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 152 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|331654615|ref|ZP_08355615.1| TonB-system energizer ExbB [Escherichia coli M718]
gi|331047997|gb|EGI20074.1| TonB-system energizer ExbB [Escherichia coli M718]
Length = 244
Score = 35.6 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 97 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 156
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 157 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|292669418|ref|ZP_06602844.1| MotA/TolQ/ExbB proton channel [Selenomonas noxia ATCC 43541]
gi|292648939|gb|EFF66911.1| MotA/TolQ/ExbB proton channel [Selenomonas noxia ATCC 43541]
Length = 212
Score = 35.6 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 10/174 (5%)
Query: 79 LKLLYILMYNLKKGSRNETENHIDDP-YNSTIFTSIPTV-LENNELTTFICDYMRMIIVG 136
+ + L+Y + E I I P V ++N + + + G
Sbjct: 31 IAIDRFLLYRRAAQGASGLEADISAALRKRKIDEVAPAVEGKDNMVAYLVRSALDARAAG 90
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS---Q 193
++ E ++ + +S + P +G++G I G+I++ +
Sbjct: 91 EDVPMTLDAAYGEAAMLLRARL----NYLSMLVTLAPLLGLLGTISGMIQSFSIFNLQAG 146
Query: 194 SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIA 247
P + IG +L T G+ ++ + + L L+A
Sbjct: 147 QPMAITGGIGEALIATATGLFVA-IFALVVHTYFAQRMDTMLTLLEKTMNTLLA 199
>gi|254442811|ref|ZP_05056287.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198257119|gb|EDY81427.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 460
Score = 35.6 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 163 HAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
I+ + P +G++G + G+I + + K L I +L T G++++
Sbjct: 366 SVIAVTAATAPLLGLLGTVTGMINTFKLITIFGTGDAKSLSGGISEALITTEFGLVVA 423
>gi|313159736|gb|EFR59093.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alistipes sp. HGB5]
Length = 252
Score = 35.6 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 172 LPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS---YSLCNPLT 224
P +G +G ++G+I A + SP ++ I V+L TL+G+I + N +
Sbjct: 166 SPMLGFMGTVVGMIAAFDAIQAAGDISPTLVAGGIKVALLTTLMGLIAAVILQLFYNYIV 225
Query: 225 SQIKSTRLKQHRLYIIVKKALIAY 248
S+I S I + L AY
Sbjct: 226 SKIDSLVNDMEDSSITLMDILTAY 249
>gi|296117352|ref|ZP_06835942.1| protein TolQ [Gluconacetobacter hansenii ATCC 23769]
gi|295976118|gb|EFG82906.1| protein TolQ [Gluconacetobacter hansenii ATCC 23769]
Length = 254
Score = 35.6 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKI 197
+ M I + + ++ +G P IG+ G + GI+ A G++ + + +
Sbjct: 136 RVNRAMSITITREMDRLNRWLIFVATIGPVAPFIGLFGTVWGIMHAFGSIAAMHNTNLSV 195
Query: 198 LGTAIGVSLTGTLLGIILS 216
+ I +L T +G++ +
Sbjct: 196 VAPGISEALFATAIGLVTA 214
>gi|237797794|ref|ZP_04586255.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331020644|gb|EGI00701.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 313
Score = 35.6 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 178 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 237
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 238 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 289
>gi|154491790|ref|ZP_02031416.1| hypothetical protein PARMER_01407 [Parabacteroides merdae ATCC
43184]
gi|154088031|gb|EDN87076.1| hypothetical protein PARMER_01407 [Parabacteroides merdae ATCC
43184]
Length = 245
Score = 35.6 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+I A + Q SP ++ + V+L T+ G+I
Sbjct: 143 EKNMSWITLFIAMAPSLGFLGTVVGMIMAFDKIEQVGDISPTVVAGGMKVALITTVGGLI 202
Query: 215 LS 216
++
Sbjct: 203 VA 204
>gi|153955382|ref|YP_001396147.1| GerKA3 [Clostridium kluyveri DSM 555]
gi|219855798|ref|YP_002472920.1| hypothetical protein CKR_2455 [Clostridium kluyveri NBRC 12016]
gi|146348240|gb|EDK34776.1| GerKA3 [Clostridium kluyveri DSM 555]
gi|219569522|dbj|BAH07506.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 493
Score = 35.6 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 12 LCIIGGFYAMGGNPYI-LIQPFEIVIVAGAGLGGFVMAN 49
L ++GGF L+ P +V+V A +G F++ N
Sbjct: 359 LSVVGGFIIGSAALEAKLVSPATLVVVGVATIGTFIIPN 397
>gi|86149755|ref|ZP_01067985.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|85840023|gb|EAQ57282.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni CF93-6]
Length = 184
Score = 35.6 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS--QSPKILGTAIGV 204
++ ++ +S + + P IG+ G ++ I++ G L S I+ I
Sbjct: 81 LEIYKNLASRRASAGLTWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSIVAPKISE 140
Query: 205 SLTGTLLGIILS 216
+L T GI+++
Sbjct: 141 ALVATGCGILVA 152
>gi|330972214|gb|EGH72280.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 320
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 185 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 244
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 245 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 296
>gi|303328318|ref|ZP_07358756.1| protein TolQ [Desulfovibrio sp. 3_1_syn3]
gi|302861648|gb|EFL84584.1| protein TolQ [Desulfovibrio sp. 3_1_syn3]
Length = 231
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 131 RMIIVGNARSYEIENL---MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKA 187
R +GN+ ++N+ + + + L + ++ + P IG+ G + GI+ +
Sbjct: 89 RSKELGNSSEVVVDNVRRALRQGVASELARLQRSLSLLATTANTAPFIGLFGTVWGIMNS 148
Query: 188 MGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
++ S S + I +L T +G+ ++
Sbjct: 149 FHSIGMLKSASLATVAPGISEALVATAIGLGVA 181
>gi|294784540|ref|ZP_06749829.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
gi|294487756|gb|EFG35115.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
Length = 193
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 138 ARSYEIENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL--- 191
+ L ++ + + + +S + + P +G++G + G+IKA ++
Sbjct: 74 ENKETLSALEEKGKEKAIERIKSLERNMWLLSLVANASPLLGLLGTVTGMIKAFNSIALN 133
Query: 192 -SQSPKILGTAIGVSLTGTLLGIILS 216
+ +L I +L T G+I++
Sbjct: 134 GTGDAGVLAKGISEALYTTAGGLIVA 159
>gi|317052095|ref|YP_004113211.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316947179|gb|ADU66655.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 208
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 149 EEIDIILYEKLKPYHAI--SHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAI 202
++++I + P +G++G ++G+I+ L + +P+ + T +
Sbjct: 70 QQMEISRLRQQLGASLFLIRTFIAMCPLLGLLGTVVGMIQVFEVLEYSGTGNPRAIATGV 129
Query: 203 GVSLTGTLLGIILS 216
++ T+ G++++
Sbjct: 130 SMATLPTMSGLVVA 143
>gi|323528304|ref|YP_004230456.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323385306|gb|ADX57396.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 250
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
I + ID + ++ +G + P +G+ G + GI A+ + + S +
Sbjct: 132 IARRLQSSIDDAVAHMQSGLAVLASIGSTAPFVGLFGTVWGIYHALIVIGETGQASIDRV 191
Query: 199 GTAIGVSLTGTLLGIILS 216
+G SL T G+ ++
Sbjct: 192 AGPVGESLIMTAFGLFVA 209
>gi|237751981|ref|ZP_04582461.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
gi|229376548|gb|EEO26639.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
Length = 190
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQSPK----ILG 199
E ++ +D + + ++ + + P IG+ G ++ I++A L ++ K ++
Sbjct: 79 EPMLQYALDKAIKDATIGLTFLAIVASTAPFIGLFGTVVEILEAFSKLGENSKATLDVIA 138
Query: 200 TAIGVSLTGTLLGIILS 216
I +L T GI+ +
Sbjct: 139 PIISKALVATAAGILTA 155
>gi|146343118|ref|YP_001208166.1| biopolymer transport protein [Bradyrhizobium sp. ORS278]
gi|146195924|emb|CAL79951.1| biopolymer transport protein [Bradyrhizobium sp. ORS278]
Length = 325
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 61/177 (34%), Gaps = 11/177 (6%)
Query: 49 NPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNST 108
+P + + + + + AL V + L++ R+ D + S
Sbjct: 85 SPWSMFLAADILVKSVMMGLALASLATWTVFIAKTVEFAILRRKLRSALRKVDDVRWLSE 144
Query: 109 IFTSIPTVLENNELTTFICDYMRMIIVG-NARSYEIENL----MDEEIDIILYEKLKPYH 163
+ + + LT I M I + + + E +
Sbjct: 145 --AKLALGSKQSVLTVLIDAAMHEIRMSSELPPHGVNERAASSFAEIVRAEGRRCRTGMG 202
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++ +G P +G+ G + GI+ + +S+ + ++ I +L T +G++ +
Sbjct: 203 LLATIGSISPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVAA 259
>gi|92116361|ref|YP_576090.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799255|gb|ABE61630.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 337
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 156 YEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLL 211
E + ++ +G + P +G+ G + GI+ A +S + ++ I +L T L
Sbjct: 215 REVARGTGLLATIGATAPFVGLFGTVWGIMNAFIGISLSKTTNLAVVAPGIAEALLATAL 274
Query: 212 GIILS 216
G++ +
Sbjct: 275 GLVAA 279
>gi|305665280|ref|YP_003861567.1| putative biopolymer transport protein [Maribacter sp. HTCC2170]
gi|88710035|gb|EAR02267.1| putative biopolymer transport protein [Maribacter sp. HTCC2170]
Length = 239
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLG 212
+ K +S P +G +G ++G+I+A +S S ++ I V+L T+ G
Sbjct: 139 QLEKNVSWLSLFIAIAPMLGFMGTVIGMIQAFQKISAVGNLSASLIAGDIQVALLTTVFG 198
Query: 213 IILS 216
+I +
Sbjct: 199 LITA 202
>gi|332086664|gb|EGI91804.1| tonB-system energizer ExbB [Shigella boydii 5216-82]
Length = 239
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 92 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 151
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 152 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|331009381|gb|EGH89437.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 219
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 84 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 143
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 144 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 195
>gi|316977640|gb|EFV60713.1| putative angiotensin-converting enzyme, somatic isoform
[Trichinella spiralis]
Length = 3635
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 215 LSYSLCNPLTSQIKSTRLKQHR-LYIIVKKALIAYMNGAIPQVAIEYGRKVLPLSERPSI 273
LS + P+ IKS +K + + + +I M +A + G+ PL +R S+
Sbjct: 435 LSNVIVAPMPGMIKSVSVKVGQAVSECQETCVIEAMKMQNSLLAPKSGKA--PLEQRASL 492
Query: 274 EIVAQEVLQYNHNK 287
E V + + +Y+ +
Sbjct: 493 EEVEEWLAKYDRDA 506
>gi|261493324|ref|ZP_05989850.1| Biopolymer transport protein exbB [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261496589|ref|ZP_05992969.1| Biopolymer transport protein exbB [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261307792|gb|EEY09115.1| Biopolymer transport protein exbB [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261310968|gb|EEY12145.1| Biopolymer transport protein exbB [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 170
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGN 190
R++ + + L + +ID+ IS +G + P IG++G ++GI+ +
Sbjct: 52 RIMFYSKVDISKYDTLEELDIDLTH-----NLTTISTIGSNAPYIGLLGTVVGILLTFYH 106
Query: 191 LSQ-----SPKILGTAIGVSLTGTLLGII---LSYSLCNPLTSQIKSTRLK 233
L Q + + ++L T +GI+ ++ N +++ +LK
Sbjct: 107 LGQSGGDIDAASIMVNLSLALKATAVGILVAIIAMVFYNGFGRKVEENKLK 157
>gi|71279709|ref|YP_268466.1| tolQ protein [Colwellia psychrerythraea 34H]
gi|71145449|gb|AAZ25922.1| tolQ protein [Colwellia psychrerythraea 34H]
Length = 228
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 28/189 (14%)
Query: 54 IKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSI 113
I + + L+ F K D+ KL + F
Sbjct: 42 ILRTAAAELKAFEDKFWSGA---DLSKLYSETSAKSQIQGIESL--------FIAGFKEF 90
Query: 114 PTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLP 173
+ +++ D ++I+ G R+ + + E+D + ++ +G P
Sbjct: 91 ARLRKSHI------DNPQIIVDGTHRAMRV--ALSREVDSLETHLP----FMATVGSISP 138
Query: 174 AIGIVGAILGII---KAMGNLSQ-SPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKS 229
IG+ G + GI+ A+G + Q + ++ I +L T +G+ + ++
Sbjct: 139 YIGLFGTVWGIMNSFIALGAVKQATLAMVAPGIAEALIATAMGLFAAIPAVIAF-NRFSH 197
Query: 230 TRLKQHRLY 238
K Y
Sbjct: 198 KVEKLENSY 206
>gi|120599222|ref|YP_963796.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|146292704|ref|YP_001183128.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|120559315|gb|ABM25242.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|145564394|gb|ABP75329.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|319426008|gb|ADV54082.1| TonB system biopolymer transport inner membrane component, TolQ
[Shewanella putrefaciens 200]
Length = 228
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
+Y R+ + + + + + + L +++ A ++ +G + P IG+ G +
Sbjct: 87 FKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKLEANLPLLATIGSTSPYIGLFGTV 146
Query: 182 LGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
GI+ + + ++ I +L T +G+ +
Sbjct: 147 WGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLFAA 185
>gi|194333404|ref|YP_002015264.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
gi|194311222|gb|ACF45617.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
Length = 199
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ--- 193
N + E E ++ +I + I + + P +GI+G +LG++ A N++
Sbjct: 83 NRKELEEEVILVGNREI--KRLNQHLDLIELISRTAPLVGILGTVLGMVTAFQNVADAGG 140
Query: 194 --SPKILGTAIGVSLTGTLLGIILS 216
+P IL + I +L T G+ ++
Sbjct: 141 SANPAILASGIWEALLTTAAGLSVA 165
>gi|170766052|ref|ZP_02900863.1| TonB-system energizer ExbB [Escherichia albertii TW07627]
gi|170125198|gb|EDS94129.1| TonB-system energizer ExbB [Escherichia albertii TW07627]
Length = 244
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 97 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 156
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 157 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|326335793|ref|ZP_08201973.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325692032|gb|EGD33991.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 238
Score = 35.6 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGII 214
K IS P +G +G ++G+I+A +S ++ I V+L T+ G+I
Sbjct: 140 EKNVSWISLFISIAPMLGFMGTVIGMIQAFEKISLAGGLDASLIAGDIQVALLTTVFGLI 199
Query: 215 LS 216
++
Sbjct: 200 VA 201
>gi|254445763|ref|ZP_05059239.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260071|gb|EDY84379.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 231
Score = 35.6 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS-- 194
N E + + + H +S + P IG++G + G+I +S
Sbjct: 115 NETREPFETEVGAALSAQENAISQWIHYLSVIANVAPMIGLLGTVSGMIGGFQTMSAGGM 174
Query: 195 --PKILGTAIGVSLTGTLLGIILS 216
P++ IG +L T G+ +
Sbjct: 175 GRPELFAGDIGEALITTATGLCIG 198
>gi|29345695|ref|NP_809198.1| putative tolQ-type transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29337588|gb|AAO75392.1| putative tolQ-type transport protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 472
Score = 35.6 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS-----QSPKILGTAIGVSLTGTLLGIILS 216
+S + P IG++G ++G+I+A G ++ IL +I +L T G+I++
Sbjct: 361 LSVIASLSPLIGLLGTVVGMIEAFGLVALYGDEGGASILSDSISKALITTAAGLIIA 417
>gi|87307367|ref|ZP_01089512.1| probable tolQ-type transport protein [Blastopirellula marina DSM
3645]
gi|87290107|gb|EAQ81996.1| probable tolQ-type transport protein [Blastopirellula marina DSM
3645]
Length = 289
Score = 35.6 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 132 MIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL 191
M+ E+ + ++E + ++ P +G++G + GII A
Sbjct: 140 MLARVGRPQAEVVHAVNEASEREADRLYSNVRWLTLAAGVTPLMGLLGTVWGIIWAFYKT 199
Query: 192 SQ------SPKILGTAIGVSLTGTLLGIILS 216
+Q L I V+L TL G++++
Sbjct: 200 TQLEIGGNRANQLAEGIYVALVTTLGGLVVA 230
>gi|301308382|ref|ZP_07214336.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. 20_3]
gi|300833852|gb|EFK64468.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. 20_3]
Length = 244
Score = 35.6 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGII 214
K I+ P++G +G ++G+I A + Q SP ++ + V+L T+ G+I
Sbjct: 142 EKNMSWITLFIAMAPSLGFLGTVVGMIMAFDKIEQVGDISPTVVAGGMKVALITTVGGLI 201
Query: 215 LS 216
++
Sbjct: 202 VA 203
>gi|291086577|ref|ZP_06356197.2| TonB-system energizer ExbB [Citrobacter youngae ATCC 29220]
gi|291067834|gb|EFE05943.1| TonB-system energizer ExbB [Citrobacter youngae ATCC 29220]
Length = 239
Score = 35.6 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + ++ +G P +G+ G + GI+ +
Sbjct: 92 LSEGSDDNEGIKERTGFRLERRVAAVGRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 151
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 152 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 183
>gi|254883124|ref|ZP_05255834.1| integral membrane protein [Bacteroides sp. 4_3_47FAA]
gi|319641793|ref|ZP_07996473.1| integral membrane protein [Bacteroides sp. 3_1_40A]
gi|254835917|gb|EET16226.1| integral membrane protein [Bacteroides sp. 4_3_47FAA]
gi|317386582|gb|EFV67481.1| integral membrane protein [Bacteroides sp. 3_1_40A]
Length = 199
Score = 35.6 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 124 TFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILG 183
+ + Y+R ++ R ++ L+ + +I + L ++ MG P +G++G ++
Sbjct: 76 SLVIAYIRRVLETKDRPAHVQRLL-ADFEITADKDLAISKTLTKMG---PMLGLMGTLIP 131
Query: 184 IIKAMGNLS-QSPKILGTAIGVSLTGTLLGIILS 216
+ A+ LS + + V+ T++G+ S
Sbjct: 132 MGPALVGLSTGDIASMAYNMQVAFATTVVGLFSS 165
>gi|87198042|ref|YP_495299.1| MotA/TolQ/ExbB proton channel [Novosphingobium aromaticivorans DSM
12444]
gi|87133723|gb|ABD24465.1| outer membrane transport energization protein ExbB [Novosphingobium
aromaticivorans DSM 12444]
Length = 249
Score = 35.6 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 45/104 (43%), Gaps = 18/104 (17%)
Query: 131 RMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA--------------ISHMGESLPAIG 176
R ++ + + + M + ++ + + ++ +G + P IG
Sbjct: 91 RQLVDDGISAEDQHSKMTDALEAHDWLHGSLARSEASINSRLASGLPFLATVGATSPFIG 150
Query: 177 IVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ G ++GI +A+ N+ S S + +G +L T LG++++
Sbjct: 151 LFGTVVGIYRALINIGLAGSASIDKVAGPVGEALIMTALGLLVA 194
>gi|304413880|ref|ZP_07395297.1| membrane spanning protein in TolA-TolQ-TolR complex [Candidatus
Regiella insecticola LSR1]
gi|304283600|gb|EFL91995.1| membrane spanning protein in TolA-TolQ-TolR complex [Candidatus
Regiella insecticola LSR1]
Length = 117
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 44/112 (39%), Gaps = 9/112 (8%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
+ M+ E++++ + +G P IG+ G + GI+ A L + +++
Sbjct: 1 MRIAMNRELEMLETH----IPFLGTVGSISPYIGLFGTVWGIMNAFIALGAAKQATLQMV 56
Query: 199 GTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYIIVKKALIAYMN 250
I +L T +G+ + +++ K + Y + A ++
Sbjct: 57 APGIAEALIATAIGLFAAIPAVM-AYNRLNLRVNKLEQNYDNFMEEFTAILH 107
>gi|319762693|ref|YP_004126630.1| protein tolq [Alicycliphilus denitrificans BC]
gi|330824834|ref|YP_004388137.1| protein TolQ [Alicycliphilus denitrificans K601]
gi|317117254|gb|ADU99742.1| protein TolQ [Alicycliphilus denitrificans BC]
gi|329310206|gb|AEB84621.1| protein TolQ [Alicycliphilus denitrificans K601]
Length = 233
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
+ + P +G+ G + GI+ A + + I +L T +G+ +
Sbjct: 132 LGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVATAIGLFAA 187
>gi|253998349|ref|YP_003050412.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313200423|ref|YP_004039081.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253985028|gb|ACT49885.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312439739|gb|ADQ83845.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 201
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL---SQ 193
++ ++ ++E + ++ K + + P +G++G ++G+++ G
Sbjct: 82 DSSREVMKEAIEESGRAVAHKLEKYLTTLGTIATVSPLLGLLGTVIGMVELFGAFTATGH 141
Query: 194 SPKILGTAIGVSLTGTLLGIILS 216
I V+L T GI+++
Sbjct: 142 DVAQFARGISVALYNTAGGIVVA 164
>gi|89092891|ref|ZP_01165843.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
gi|89082916|gb|EAR62136.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
Length = 206
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENLMDEEID----IILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
++++ G + +M E I ++++ + + + + P +G++G ++G+I
Sbjct: 72 QILVAGLNNASHGREIMKESIQEAAGQVVHDLERFLNPLGTIAAITPLLGLLGTVIGMID 131
Query: 187 AMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
+ + + +L I +L T G+ ++
Sbjct: 132 VFTEIMVQGTGNANVLAGGISQALITTATGLTIA 165
>gi|310816769|ref|YP_003964733.1| tonB-system energizer ExbB [Ketogulonicigenium vulgare Y25]
gi|308755504|gb|ADO43433.1| tonB-system energizer ExbB [Ketogulonicigenium vulgare Y25]
Length = 311
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 134 IVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ 193
+ G + + M+ + ++ +G P +G+ G + GI+ + +++
Sbjct: 178 VDGEGVKERVASRMNRIEIAAGRRIGRGVGLLATIGSVGPFVGLFGTVWGIMNSFIGIAE 237
Query: 194 ----SPKILGTAIGVSLTGTLLGIILS 216
+ ++ I +L T LG++ +
Sbjct: 238 TQTTNLAVVAPGIAEALLATALGLVAA 264
>gi|256420471|ref|YP_003121124.1| MotA/TolQ/ExbB proton channel [Chitinophaga pinensis DSM 2588]
gi|256035379|gb|ACU58923.1| MotA/TolQ/ExbB proton channel [Chitinophaga pinensis DSM 2588]
Length = 286
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYE-IENLMDEEIDIILYE---KLKPYHAISHMGESLPAIGIVGAI 181
+ Y MI + + I + +E + E K +S + +G+ G +
Sbjct: 151 LKKYKEMITNTELDTEQKILTIKNEIEETTALELPMMEKNLVFLSTIASVATLLGLFGTV 210
Query: 182 LGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
LG+IK+ +S L I +L T LGI S
Sbjct: 211 LGMIKSFSAMSAGGAPDSAKLALGISEALINTALGIGTS 249
>gi|300774591|ref|ZP_07084454.1| biopolymer transporter [Chryseobacterium gleum ATCC 35910]
gi|300506406|gb|EFK37541.1| biopolymer transporter [Chryseobacterium gleum ATCC 35910]
Length = 234
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 142 EIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPK 196
+I + M+ + + + K + ++ + P +G++G ++G+I A NLS SPK
Sbjct: 119 DIVSAMEAQAQVEVANMEKNLNLLAVVPSIAPMLGLLGTVIGMIIAFFNLSHATGSFSPK 178
Query: 197 ILGTAIGVSLTGTLLGIILS 216
L I +L T +G+ ++
Sbjct: 179 TLSEGIYTALGQTAVGLAVA 198
>gi|212693948|ref|ZP_03302076.1| hypothetical protein BACDOR_03472 [Bacteroides dorei DSM 17855]
gi|237710391|ref|ZP_04540872.1| integral membrane protein [Bacteroides sp. 9_1_42FAA]
gi|237723920|ref|ZP_04554401.1| integral membrane protein [Bacteroides sp. D4]
gi|265751199|ref|ZP_06087262.1| integral membrane protein [Bacteroides sp. 3_1_33FAA]
gi|212663480|gb|EEB24054.1| hypothetical protein BACDOR_03472 [Bacteroides dorei DSM 17855]
gi|229437746|gb|EEO47823.1| integral membrane protein [Bacteroides dorei 5_1_36/D4]
gi|229455853|gb|EEO61574.1| integral membrane protein [Bacteroides sp. 9_1_42FAA]
gi|263238095|gb|EEZ23545.1| integral membrane protein [Bacteroides sp. 3_1_33FAA]
Length = 199
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 129 YMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
Y+R ++ R ++ L+ + +I + L ++ MG P +G++G ++ + A+
Sbjct: 81 YIRRVLGSKDRPAHVQRLL-ADFEITADKDLAISKTLTKMG---PMLGLMGTLIPMGPAL 136
Query: 189 GNLS-QSPKILGTAIGVSLTGTLLGIILS 216
LS + + V+ T++G+ S
Sbjct: 137 VGLSTGDIASMAYNMQVAFATTVVGLFSS 165
>gi|326385756|ref|ZP_08207385.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
gi|326209735|gb|EGD60523.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
Length = 575
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKI----LGTAIGVSLTGTLLGIILS 216
P +G++G ++G++ ++ S + + I +L T++G++++
Sbjct: 477 GAPFLGLLGTVIGVMITFAAIAASGDVNVNTIAPGISAALACTVVGLVVA 526
>gi|283787142|ref|YP_003367007.1| biopolymer transport protein [Citrobacter rodentium ICC168]
gi|282950596|emb|CBG90266.1| biopolymer transport protein [Citrobacter rodentium ICC168]
Length = 244
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAI 202
++ + + + ++ +G P +G+ G + GI+ + ++Q + ++ I
Sbjct: 115 LERRVAAAGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGI 174
Query: 203 GVSLTGTLLGIILS 216
+L T +G++ +
Sbjct: 175 AEALLATAIGLVAA 188
>gi|157162484|ref|YP_001459802.1| biopolymer transport protein ExbB [Escherichia coli HS]
gi|157068164|gb|ABV07419.1| TonB-system energizer ExbB [Escherichia coli HS]
Length = 244
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 97 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 156
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 157 IGIAQTQTANLAVVAPGIAEALLATAIGLVAA 188
>gi|152981614|ref|YP_001352054.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
gi|151281691|gb|ABR90101.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
Length = 242
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
+ + ID + ++ +G + P +G+ G + GI A+ + S + +
Sbjct: 112 LRQAIDETSAKLQSGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQASIDKVAGPV 171
Query: 203 GVSLTGTLLGIILS 216
G +L T LG+ ++
Sbjct: 172 GEALIMTALGLAVA 185
>gi|71735760|ref|YP_272498.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556313|gb|AAZ35524.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 314
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 179 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 238
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 239 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 290
>gi|66043475|ref|YP_233316.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63254182|gb|AAY35278.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 320
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 185 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 244
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 245 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 296
>gi|114047935|ref|YP_738485.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|117920975|ref|YP_870167.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
gi|113889377|gb|ABI43428.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|117613307|gb|ABK48761.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 228
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 126 ICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA----ISHMGESLPAIGIVGAI 181
+Y R+ + + + + + + L +L+ A ++ +G + P IG+ G +
Sbjct: 87 FKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSRELEKLEANLPLLATIGSTSPYIGLFGTV 146
Query: 182 LGIIKAMGNLSQSP----KILGTAIGVSLTGTLLGIILS 216
GI+ + + ++ I +L T +G+ +
Sbjct: 147 WGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLFAA 185
>gi|194333581|ref|YP_002015441.1| protein TolQ [Prosthecochloris aestuarii DSM 271]
gi|194311399|gb|ACF45794.1| protein TolQ [Prosthecochloris aestuarii DSM 271]
Length = 220
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 9/135 (6%)
Query: 78 VLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYM--RMIIV 135
++ Y L+ SR+ + + +F F Y+ R +
Sbjct: 36 IIIFKYGLIRKAMSESRDFLDYFFEVSSLDKVFGESERYRNGALARVFRAGYIEYRALSD 95
Query: 136 GNAR---SYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL- 191
I + E + + ++ +G + P IG+ G + GI+ + ++
Sbjct: 96 RQDTRFCEERIARAIKREANAESSRLSRYVAFLATVGNTAPFIGLFGTVWGIMNSFQSIG 155
Query: 192 ---SQSPKILGTAIG 203
S S + I
Sbjct: 156 LTQSASLATVAPGIA 170
>gi|270263128|ref|ZP_06191398.1| TonB-system energizer ExbB type-1 [Serratia odorifera 4Rx13]
gi|270042816|gb|EFA15910.1| TonB-system energizer ExbB type-1 [Serratia odorifera 4Rx13]
Length = 323
Score = 35.6 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 135 VGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GN 190
N ++ + + ++ +G P +G+ G + GI+ + +
Sbjct: 182 DNNGIKERTGFRLERRVAGYSRNMGRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHS 241
Query: 191 LSQSPKILGTAIGVSLTGTLLGIILS 216
+ + ++ I +L T LG++ +
Sbjct: 242 QTTNLAVVAPGIAEALLATALGLVAA 267
>gi|169633365|ref|YP_001707101.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii SDF]
gi|169152157|emb|CAP01059.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii]
Length = 211
Score = 35.6 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 144 ENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILG 199
M+ + K + + + P +G++G ++GII++ + SP ++
Sbjct: 88 RAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGLAGSPSLMI 147
Query: 200 TAIGVSLTGTLLGIILS 216
+ I +L T +G++++
Sbjct: 148 SGISKALITTAVGMLIA 164
>gi|330876516|gb|EGH10665.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|331018570|gb|EGH98626.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 318
Score = 35.3 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 183 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 242
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 243 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 294
>gi|329898121|ref|ZP_08272325.1| hypothetical protein IMCC3088_325 [gamma proteobacterium IMCC3088]
gi|328920923|gb|EGG28353.1| hypothetical protein IMCC3088_325 [gamma proteobacterium IMCC3088]
Length = 249
Score = 35.3 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 171 SLPAIGIVGAILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSY 217
+LP IGI G G++ M N+ P L AI V+ L I+ +
Sbjct: 37 ALPEIGIFGMYAGLVIMMSNMYD-PANLPPAIAVAFMPILYASIIGF 82
>gi|157278618|ref|NP_001098409.1| membrane protein MLC1 [Danio rerio]
gi|156230284|gb|AAI51968.1| Mlc1 protein [Danio rerio]
Length = 391
Score = 35.3 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 13/73 (17%)
Query: 2 STIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIV---------AGAGLGGFVMA-NPL 51
+I L + I + GG A+ N L+ P + V + + V+A NP
Sbjct: 214 FAVIELIVGIAAVFGGIIAL--NLGALL-PEPYLSVTFFWILAACFPSAIASHVVAENPS 270
Query: 52 KVIKDSGVSLLEI 64
K + + +++ +
Sbjct: 271 KSLVEMLIAISSV 283
>gi|145297919|ref|YP_001140760.1| TonB system transport protein ExbB2 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850691|gb|ABO89012.1| TonB system transport protein ExbB2 [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 175
Score = 35.3 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNL----SQSPKILGTAIGVSLTGTLLGIILS 216
I + P +G++G ++G+++ L + SP+ + + I + T+ G+I +
Sbjct: 91 VIKVLIALCPLMGLLGTVVGMVQVFDTLAITGTGSPRAMASGISKATVPTMAGMIAA 147
>gi|308050001|ref|YP_003913567.1| Cell division and transport-associated protein TolQ [Ferrimonas
balearica DSM 9799]
gi|307632191|gb|ADN76493.1| Cell division and transport-associated protein TolQ [Ferrimonas
balearica DSM 9799]
Length = 230
Score = 35.3 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 30/211 (14%)
Query: 51 LKVIKDSGVSLLEIFGYKALGQDTY---CDVLKLLYILMYNLKKGSRNETENHIDDPYNS 107
VI +L E +D + D+ +L L + S E +
Sbjct: 33 WTVIFQRQKALKEAQRRAQRFEDRFWSGVDLNRLYQELSARGDQNSGLEL-------MFT 85
Query: 108 TIFTSIPTVLENNELTTFICDY-MRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAIS 166
F + +++ + D R + V + E+D + ++
Sbjct: 86 NGFKEYARLSKSSRSAEAVMDGSYRAMRVS----------LSREVDKLEQHLP----MLA 131
Query: 167 HMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILSYSLCNP 222
+G + P IG+ G + GI+ + L + ++ I +L T +G+ +
Sbjct: 132 TIGSTSPYIGLFGTVWGIMNSFIALGSVQHATLNMVAPGIAEALIATAMGLFAAIPAVI- 190
Query: 223 LTSQIKSTRLKQHRLYIIVKKALIAYMNGAI 253
++ + K Y A ++
Sbjct: 191 FFNRFSTRVEKLENSYANFMDEFSAILHRQA 221
>gi|260599390|ref|YP_003211961.1| biopolymer transport protein ExbB [Cronobacter turicensis z3032]
gi|260218567|emb|CBA33808.1| Biopolymer transport protein exbB [Cronobacter turicensis z3032]
Length = 239
Score = 35.3 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 131 RMIIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIK 186
R + G + I+ ++ + + ++ +G P +G+ G + GI+
Sbjct: 90 RELSAGCEDNEGIKERTGFRLERRVAAAGRHMGRGNGYLATIGAISPFVGLFGTVWGIMN 149
Query: 187 AMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ ++Q + ++ I +L T +G+I +
Sbjct: 150 SFIGIAQSQTTNLAVVAPGIAEALLATAIGLIAA 183
>gi|271498917|ref|YP_003331942.1| tonB-system energizer ExbB [Dickeya dadantii Ech586]
gi|270342472|gb|ACZ75237.1| tonB-system energizer ExbB [Dickeya dadantii Ech586]
Length = 311
Score = 35.3 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIG 203
+ + + + ++ +G P IG+ G + GI+ + ++Q + ++ I
Sbjct: 183 ERRVAATGRQMGRGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIA 242
Query: 204 VSLTGTLLGIILS 216
+L T +G++ +
Sbjct: 243 EALLATAIGLVAA 255
>gi|292491864|ref|YP_003527303.1| tonB-system energizer ExbB [Nitrosococcus halophilus Nc4]
gi|291580459|gb|ADE14916.1| tonB-system energizer ExbB [Nitrosococcus halophilus Nc4]
Length = 311
Score = 35.3 bits (80), Expect = 9.6, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
I + + ++ +G + P +G+ G + GI+ + +S+ +
Sbjct: 174 ERIATGLGRIEVAASRRISRGTGILATIGSTAPFVGLFGTVWGIMNSFIGISEAQTTNLA 233
Query: 197 ILGTAIGVSLTGTLLGIILS 216
++ I +L T +G+I +
Sbjct: 234 VVAPGIAEALLVTAIGLIAA 253
>gi|262373303|ref|ZP_06066582.1| TolQ [Acinetobacter junii SH205]
gi|262313328|gb|EEY94413.1| TolQ [Acinetobacter junii SH205]
Length = 291
Score = 35.3 bits (80), Expect = 9.6, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
+ ID + ++ +G + P +G+ G + GI A+ + S + +
Sbjct: 171 IQRAIDKVQSHLGNGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPV 230
Query: 203 GVSLTGTLLGIILS 216
G +L T +G+ ++
Sbjct: 231 GEALIMTAIGLAVA 244
>gi|228471649|ref|ZP_04056423.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228277068|gb|EEK15754.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 233
Score = 35.3 bits (80), Expect = 9.6, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 159 LKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGTLLGII 214
K IS P +G +G ++G+I+A +S ++ I V+L T+ G+I
Sbjct: 135 EKNISWISLFISIAPMLGFMGTVIGMIQAFEKISLAGGLDASLIAGDIQVALLTTVFGLI 194
Query: 215 LS 216
++
Sbjct: 195 VA 196
>gi|77919741|ref|YP_357556.1| putative general protein secretion protein [Pelobacter carbinolicus
DSM 2380]
gi|77545824|gb|ABA89386.1| putative general protein secretion protein [Pelobacter carbinolicus
DSM 2380]
Length = 405
Score = 35.3 bits (80), Expect = 9.6, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 36/221 (16%)
Query: 2 STIIGLFITILCIIGGFYAM---------GGNP----------YILIQPFEIVIVAGAGL 42
+T++G+ + ++ +I F GG IQ + I+ G L
Sbjct: 174 ATVVGIAVIVIGVILVFVIPAFEKMFADFGGVLPLPTRIVIAISNFIQSWIFAIIGGVLL 233
Query: 43 GGFVM----ANPL-KVIKDSGVSLLEIFGY--KALGQDTYCDVLK--------LLYILMY 87
F+ A P + + D+ L +FG + + + L +L L
Sbjct: 234 TSFLFKRFYATPKGRTLVDAYALKLPVFGVLIRKVAVAKFSRTLGTMISSGVPILDGLDI 293
Query: 88 NLKKGSRNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLM 147
K EN + S + T+ E E T + +I +S I+ ++
Sbjct: 294 VAKTAGNKTVENAVYKVRQS--ISEGKTIAEPLEKTGVFPPMVCQMIGVGEQSGSIDGML 351
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
++ D E + ++ M E + + + + G++ AM
Sbjct: 352 NKIADFYDDEVDEAVGNLTAMMEPMLMLFLGTTVGGLVIAM 392
>gi|89899566|ref|YP_522037.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89344303|gb|ABD68506.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 217
Score = 35.3 bits (80), Expect = 9.6, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 133 IIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS 192
+ +S ++ ++ + + L + ++ +G + P +G++G + GI A+ ++
Sbjct: 90 LSSAGDKSQQLTRVLRDALHAALTKLHYGQVLLATVGATAPFVGLLGTVWGIYHALIGIA 149
Query: 193 Q----SPKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G+ ++
Sbjct: 150 NAGQVTIDKISGPVGEALIMTAAGLAVA 177
>gi|145868|gb|AAA23732.1| exbB peptide [Escherichia coli]
Length = 244
Score = 35.3 bits (80), Expect = 9.6, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 97 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 156
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 157 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 188
>gi|120554728|ref|YP_959079.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120324577|gb|ABM18892.1| outer membrane transport energization protein ExbB [Marinobacter
aquaeolei VT8]
Length = 235
Score = 35.3 bits (80), Expect = 9.6, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNL-----SQSP 195
EIE M+E + ++ K ++ + +G++G I+G+I A + +Q
Sbjct: 92 EEIEYAMEEGLLDVMPRLEKRTQYLATLANIATLLGLLGTIIGLIAAFTAVAAADPAQKA 151
Query: 196 KILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+L +I V++ T G++ + + + S +++ + + +
Sbjct: 152 SLLSQSISVAMNTTAFGLMSAIPMLL-IHSLLQTKTNEIVDSFEM 195
>gi|302189232|ref|ZP_07265905.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
Length = 320
Score = 35.3 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 185 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 244
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 245 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 296
>gi|291513614|emb|CBK62824.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Alistipes shahii WAL 8301]
Length = 206
Score = 35.3 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILS 216
++ + P IG +G +LG+++ ++S +L + + V++ T++G+I+
Sbjct: 112 LATIAGGAPMIGFLGTVLGMVQTFMDMSAAGGTVDLGLLSSGMYVAMVTTVMGLIVG 168
>gi|268325269|emb|CBH38857.1| conserved hypothetical membrane protein, MotA/TolQ/ExbB proton
channel family [uncultured archaeon]
Length = 205
Score = 35.3 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 45 FVMANPLKVIKDSGVSLLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDP 104
F+++N L + ++LL + + + + + L N+ + HI
Sbjct: 12 FMISNSL--LYPVIIALLGLIAWSLMTFGQFVSEYASRSRDITKL-DAGCNDAKKHIKMG 68
Query: 105 YNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHA 164
ST + + N+ L FI D + I + S IE L+ ++ ++ + +L+
Sbjct: 69 DFSTASAVLISCGSNDLLMKFIRD-LSEFIGVDMFSVRIEKLL-QDYELKIARELEKARL 126
Query: 165 ISHMGESLPAIGIVGAILGI-IKAMGNLSQSPKILGTAIGVSLTGTLLGIILS 216
++ +G P +G++G ++ + MG + + + L + + ++ + T+LG++
Sbjct: 127 VARLG---PVLGLMGTLIPMGPALMGLSTGNIQQLASNLTIAFSTTVLGLLAG 176
>gi|170697552|ref|ZP_02888642.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|170137575|gb|EDT05813.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
Length = 312
Score = 35.3 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
Query: 94 RNETENHIDDPYNSTIFTSIPTVLENNELTTFICDYMRMIIVGNARSYEIENLMDEEIDI 153
E +DD + F + + T + D + R+ I+ ++ I
Sbjct: 136 LAEGAAQLDD-ASPFRFIAENAIEAGEHHDTALLDSV-------DRNTWIDLNIERSITS 187
Query: 154 ILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAIGVSLTGT 209
+ + +G + P +G+ G + GI A+ + S + +G +L T
Sbjct: 188 VSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALIMT 247
Query: 210 LLGIILS 216
+G+ ++
Sbjct: 248 AIGLAVA 254
>gi|148926909|ref|ZP_01810587.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni CG8486]
gi|145844486|gb|EDK21594.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni CG8486]
Length = 184
Score = 35.3 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS--QSPKILGTAIGV 204
++ ++ +S + + P IG+ G ++ I++ G L S I+ I
Sbjct: 81 LEIYKNLASRRASAGLTWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISE 140
Query: 205 SLTGTLLGIILS 216
+L T GI+++
Sbjct: 141 ALVATGCGILVA 152
>gi|28867309|ref|NP_789928.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213970702|ref|ZP_03398827.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|301382589|ref|ZP_07231007.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302063044|ref|ZP_07254585.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|302133608|ref|ZP_07259598.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28850543|gb|AAO53623.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213924536|gb|EEB58106.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
Length = 318
Score = 35.3 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 183 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 242
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 243 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 294
>gi|34497427|ref|NP_901642.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
gi|34497439|ref|NP_901654.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
gi|34103282|gb|AAQ59644.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
gi|34103294|gb|AAQ59656.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
Length = 248
Score = 35.3 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 147 MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKILGTAI 202
+ + +D + I+ +G + P +G+ G + GI A+ + S + +
Sbjct: 137 ISDAVDSASHHMQNGLSVIATVGSTAPFVGLFGTVWGIYHALVKIGTSGQASIDKVAGPV 196
Query: 203 GVSLTGTLLGIILS 216
G +L T +G+ ++
Sbjct: 197 GEALIMTAIGLAVA 210
>gi|87118937|ref|ZP_01074835.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MED121]
gi|86165328|gb|EAQ66595.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MED121]
Length = 210
Score = 35.3 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKIL 198
++ + E +++E + + + + P +G++G ++G+IK L + +L
Sbjct: 88 MKESIQEAASHVIHELERFMNTLGTIAAISPLLGLLGTVVGMIKVFAVLMEQGVGDTALL 147
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T G+ ++
Sbjct: 148 AGGISEALLTTAAGLGVA 165
>gi|289672859|ref|ZP_06493749.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
gi|330977354|gb|EGH77304.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 317
Score = 35.3 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 182 ERVSFRLERLVAACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 241
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + + ++V
Sbjct: 242 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLV 293
>gi|302382824|ref|YP_003818647.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
gi|302193452|gb|ADL01024.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
Length = 293
Score = 35.3 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGI----IKAMGNLSQSPKILGTAIGVSLTGTLLG 212
++ +G + P +G+ G + GI I + + + + + I +L T +G
Sbjct: 190 RLSGGQQFLASVGSTGPFVGLFGTVYGIMNSFIGIVESNTTNLAAVAPGIAEALLATGIG 249
Query: 213 IILS 216
+ +
Sbjct: 250 LFAA 253
>gi|253567682|ref|ZP_04845093.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251841755|gb|EES69835.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 467
Score = 35.3 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLS-----QSPKILGTAIGVSLTGTLLGIILS 216
+S + P IG++G ++G+I+A G ++ IL +I +L T G+I++
Sbjct: 356 LSVIASLSPLIGLLGTVVGMIEAFGLVALYGDEGGASILSDSISKALITTAAGLIIA 412
>gi|209518569|ref|ZP_03267389.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209501019|gb|EEA01055.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 207
Score = 35.3 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 16/149 (10%)
Query: 84 ILMYNLKKGSRNETENHIDDPYNSTIFTSIP-TVLENNELTTFICDYM-------RMI-- 133
+MY L I+ Y F S P +L+ D + RM
Sbjct: 16 WIMYPLSLLGVLALTIIIERAYVFARFASAPARLLQPTSGDDNRLDGLAPHHAFRRMAAP 75
Query: 134 -IVGNARSYEIENLMDEEIDIILYEKL-KPYHAISHMGESLPAIGIVGAILGIIKAM--- 188
+ + + + I + + + + + + P +G++G I+G++K+
Sbjct: 76 WLPESDSPLWLREASAQSIAAQIERDMGRGLWLLETIVTAAPLLGLLGTIVGMMKSFQLF 135
Query: 189 -GNLSQSPKILGTAIGVSLTGTLLGIILS 216
GN P + + SL T +G+I++
Sbjct: 136 GGNGLVDPGGVTGGVAQSLVATAIGLIVA 164
>gi|206561712|ref|YP_002232477.1| putative transport-related membrane protein [Burkholderia
cenocepacia J2315]
gi|198037754|emb|CAR53698.1| putative transport-related membrane protein [Burkholderia
cenocepacia J2315]
Length = 222
Score = 35.3 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
RS + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 103 ERSERVLRALRHAMLRSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 162
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 163 QIENVAGPVGEALIMTAFGLVVA 185
>gi|171322985|ref|ZP_02911656.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171091638|gb|EDT37214.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 222
Score = 35.3 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 138 ARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQS--- 194
RS + + + ++ +G + P +G++G + GI A+G+++ S
Sbjct: 103 ERSERVLRALRHAMLRSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQA 162
Query: 195 -PKILGTAIGVSLTGTLLGIILS 216
+ + +G +L T G++++
Sbjct: 163 QIENVAGPVGEALIMTAFGLVVA 185
>gi|260060705|ref|YP_003193785.1| putative biopolymer transport protein [Robiginitalea biformata
HTCC2501]
gi|88784835|gb|EAR16004.1| putative biopolymer transport protein [Robiginitalea biformata
HTCC2501]
Length = 220
Score = 35.3 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 157 EKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLG 212
+ K +S P +G +G ++G+I+A +S S ++ I V+L T+ G
Sbjct: 120 QLEKNVSWLSLFIAIAPMLGFMGTVIGMIQAFQKISAVGNLSASLIAGDIQVALLTTVFG 179
Query: 213 IILS 216
+I +
Sbjct: 180 LITA 183
>gi|313159658|gb|EFR59016.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alistipes sp. HGB5]
Length = 223
Score = 35.3 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ-----SPKILGTAIGVSLTGTLLGIILS 216
++ + P IG +G +LG+++ ++S +L + + V++ T++G+I+
Sbjct: 129 LATIAGGAPMIGFLGTVLGMVQTFMDMSAAGGTVDLGLLSSGMYVAMVTTVMGLIVG 185
>gi|302343859|ref|YP_003808388.1| protein TolQ [Desulfarculus baarsii DSM 2075]
gi|301640472|gb|ADK85794.1| protein TolQ [Desulfarculus baarsii DSM 2075]
Length = 277
Score = 35.3 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 143 IENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLS----QSPKIL 198
I+ + + + ++ + P IG+ G + GI+ A N+ + +
Sbjct: 149 IKRALSRGTAAEATKLARSVTFLATCANTSPFIGLFGTVWGIMDAFSNIGALKTANLATV 208
Query: 199 GTAIGVSLTGTLLGIILS 216
I +L T G+ +
Sbjct: 209 APGIAEALVATATGLFAA 226
>gi|293394345|ref|ZP_06638645.1| TonB system transporter ExbB [Serratia odorifera DSM 4582]
gi|291423323|gb|EFE96552.1| TonB system transporter ExbB [Serratia odorifera DSM 4582]
Length = 317
Score = 35.3 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 148 DEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM----GNLSQSPKILGTAIG 203
+ + + K ++ +G P +G+ G + GI+ + + + + ++ I
Sbjct: 189 ERRVAAYGRQLGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIA 248
Query: 204 VSLTGTLLGIILS 216
+L T LG++ +
Sbjct: 249 EALLATALGLVAA 261
>gi|240948552|ref|ZP_04752925.1| colicin transport protein TolQ [Actinobacillus minor NM305]
gi|240297060|gb|EER47631.1| colicin transport protein TolQ [Actinobacillus minor NM305]
Length = 226
Score = 35.3 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 165 ISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
+ +G P IG+ G + GI+ + LS + + + I +L T +G+ +
Sbjct: 131 LGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLFAA 186
>gi|258405043|ref|YP_003197785.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257797270|gb|ACV68207.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 200
Score = 35.3 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 164 AISHMGESLPAIGIVGAILGIIKAMGNLSQSP-----KILGTAIGVSLTGTLLGI----- 213
+S + P +G++G +LG+I +S +P +L I +L T G+
Sbjct: 106 VLSAGAAAAPLMGLLGTVLGMINVFSRVSSAPGGVDIALLADGIWQALLTTAAGLGVAIP 165
Query: 214 -ILSYSLCNPLTSQIKSTRLKQHRLY 238
+L+Y L +I + + +
Sbjct: 166 SLLAYHFLIRLQDKIGFRMAHEGQNF 191
>gi|222825086|dbj|BAH22244.1| phage tail tape measure protein [Wolbachia endosymbiont of Cadra
cautella]
Length = 723
Score = 35.3 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 60/159 (37%), Gaps = 11/159 (6%)
Query: 5 IGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVSLLEI 64
IGL II GF A+ L+ +++ G + ++ +V+K+ V++ E
Sbjct: 561 IGLSAVFPAIIVGFKALT---IALMSNPMGLVIGGLAVAATLIITKWQVVKNFFVTIWES 617
Query: 65 FG-----YKALGQDTYCDVLKLLYILMYNLKKGSRNETE-NHIDDPYNSTIFTSIPTVLE 118
+ + ++ + + K + ++ E +++ + ++ P
Sbjct: 618 VKIVWKSFSDWVGKFWNNITQPFRTISNLWNKRNESKLEVKSVNNVISDSL--KYPIAAH 675
Query: 119 NNELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYE 157
+ + + I + + + ++ DE ++ I +
Sbjct: 676 SKAVENKTQNNHFSINIHSTPGQDTRSIADEVMERIREQ 714
>gi|323173751|gb|EFZ59380.1| tonB-system energizer ExbB [Escherichia coli LT-68]
gi|323188563|gb|EFZ73848.1| tonB-system energizer ExbB [Escherichia coli RN587/1]
Length = 230
Score = 35.3 bits (80), Expect = 10.0, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 133 IIVGNARSYEIENL----MDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAM 188
+ G+ + I+ ++ + + + + ++ +G P +G+ G + GI+ +
Sbjct: 83 LSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSF 142
Query: 189 GNLSQ----SPKILGTAIGVSLTGTLLGIILS 216
++Q + ++ I +L T +G++ +
Sbjct: 143 IGIAQTQTTNLAVVAPGIAEALLATAIGLVAA 174
>gi|585111|sp|Q05605|EXBB_PSEPU RecName: Full=Biopolymer transport protein exbB
gi|49193|emb|CAA49714.1| inner-membrane protein ExbB [Pseudomonas putida]
Length = 329
Score = 35.3 bits (80), Expect = 10.0, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 141 YEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPK 196
+ ++ + ++ +G + P +G+ G + GI+ + +++ +
Sbjct: 198 ERVAFRLERLVAASGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLA 257
Query: 197 ILGTAIGVSLTGTLLG-------IILSYSLCNPLTSQIKSTRLKQHRLYIIV 241
++ I +L T LG +++ + ++ ++V
Sbjct: 258 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLV 309
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.151 0.399
Lambda K H
0.267 0.0465 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,508,742,126
Number of Sequences: 14124377
Number of extensions: 259152733
Number of successful extensions: 1072139
Number of sequences better than 10.0: 4804
Number of HSP's better than 10.0 without gapping: 2521
Number of HSP's successfully gapped in prelim test: 3749
Number of HSP's that attempted gapping in prelim test: 1062862
Number of HSP's gapped (non-prelim): 7533
length of query: 290
length of database: 4,842,793,630
effective HSP length: 138
effective length of query: 152
effective length of database: 2,893,629,604
effective search space: 439831699808
effective search space used: 439831699808
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 81 (35.6 bits)