Query         gi|255764489|ref|YP_003065094.2| stationary phase survival protein SurE [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 250
No_of_seqs    158 out of 1614
Neff          7.7 
Searched_HMMs 33803
Date          Wed Jun  1 14:52:16 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 255764489.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >2phj_A 5'-nucleotidase SURE;  100.0       0       0  566.3  22.0  247    1-250     2-250 (251)
  2 >2v4n_A Multifunctional protei 100.0       0       0  556.6  21.8  231    1-236     2-233 (233)
  3 >2e6c_A 5'-nucleotidase SURE;  100.0       0       0  548.6  18.1  236    1-247     1-243 (244)
  4 >1j9j_A Stationary phase survi 100.0       0       0  542.4  20.7  229    1-235     1-233 (233)
  5 >1l5x_A SurviVal protein E; st 100.0       0       0  524.5  17.7  243    1-247     1-253 (280)
  6 >1f0k_A MURG, UDP-N-acetylgluc  95.4   0.055 1.6E-06   32.3   6.3  112    1-126     7-128 (196)
  7 >2r60_A Glycosyl transferase,   95.3    0.23 6.9E-06   28.5  10.4  114    1-126     8-152 (290)
  8 >2p6p_A Glycosyl transferase;   94.9    0.12 3.5E-06   30.3   7.0  110    1-126     1-137 (217)
  9 >2gek_A Phosphatidylinositol m  94.1    0.29 8.6E-06   27.9   7.4  114    1-127    21-140 (237)
 10 >1iir_A Glycosyltransferase GT  93.7   0.095 2.8E-06   30.9   4.3  113    1-126     1-126 (254)
 11 >3c48_A Predicted glycosyltran  92.6    0.78 2.3E-05   25.3   9.9  115    1-127    21-155 (250)
 12 >2iw1_A Lipopolysaccharide cor  92.4    0.28 8.2E-06   28.1   5.1   87    1-94      1-91  (190)
 13 >1rzu_A Glycogen synthase 1; g  92.3    0.14   4E-06   29.9   3.5   39    1-39      1-46  (285)
 14 >1rrv_A Glycosyltransferase GT  91.1    0.11 3.2E-06   30.5   1.8  113    1-126     1-127 (257)
 15 >2qzs_A Glycogen synthase; gly  90.9    0.25 7.5E-06   28.3   3.6  112    1-122     1-158 (284)
 16 >2jjm_A Glycosyl transferase,   89.9     1.4 4.1E-05   23.8   6.7  112    1-126    16-134 (216)
 17 >3fro_A GLGA glycogen synthase  89.0    0.64 1.9E-05   25.8   4.4   43    1-43      3-51  (251)
 18 >2iyf_A OLED, oleandomycin gly  88.1    0.24 7.2E-06   28.4   1.8  113    1-126     8-134 (267)
 19 >3beo_A UDP-N-acetylglucosamin  85.4     2.8 8.2E-05   21.9   6.2  118    1-128     9-130 (211)
 20 >2vyc_A Biodegradative arginin  84.2     2.3 6.9E-05   22.4   5.2   88    1-126     1-94  (139)
 21 >2iuy_A Avigt4, glycosyltransf  83.8     2.9 8.6E-05   21.8   5.5   93    1-126     4-113 (177)
 22 >2x0d_A WSAF; GT4 family, tran  77.6     1.7 5.1E-05   23.2   2.6   40    1-40     47-92  (253)
 23 >1qo0_D AMIR; binding protein,  75.5     4.3 0.00013   20.8   4.2   32    1-35      2-33  (101)
 24 >1p80_A Catalase HPII; beta ba  71.3     2.4 7.1E-05   22.3   2.0   47    2-48     21-67  (172)
 25 >3h4t_A Glycosyltransferase GT  70.6     2.3 6.9E-05   22.4   1.9  113    1-126     1-125 (244)
 26 >1kjq_A GART 2, phosphoribosyl  65.8     6.6  0.0002   19.6   3.4   73    1-93     12-84  (125)
 27 >2iya_A OLEI, oleandomycin gly  64.9     7.5 0.00022   19.3   3.5  110    1-125    13-138 (262)
 28 >3d0r_A Protein CALG3; caliche  64.5     8.9 0.00026   18.8   3.8  112    1-126    21-160 (237)
 29 >2ggs_A 273AA long hypothetica  57.0      11 0.00033   18.2   3.3   41    1-44      1-41  (273)
 30 >2hqr_A Putative transcription  56.7     7.6 0.00022   19.2   2.3   31    1-34      1-31  (99)
 31 >2p5y_A UDP-glucose 4-epimeras  53.7      13 0.00037   17.9   3.1  103    1-120     1-111 (311)
 32 >1udb_A Epimerase, UDP-galacto  51.3      15 0.00044   17.4   3.1  139    1-152     1-166 (338)
 33 >1gsa_A Glutathione synthetase  51.0      10  0.0003   18.5   2.2   39    1-39      2-44  (129)
 34 >1kgs_A DRRD, DNA binding resp  48.2      19 0.00056   16.8   3.3   80    1-125     3-82  (124)
 35 >2bll_A Protein YFBG; decarbox  47.9      18 0.00053   16.9   3.1   33    1-36      1-33  (345)
 36 >1dcf_A ETR1 protein; beta-alp  47.6      20  0.0006   16.7   3.3   60    1-100     8-67  (136)
 37 >2b4a_A BH3024; 10175646, stru  46.9      21 0.00061   16.6   4.3   80    1-125    16-96  (138)
 38 >3i42_A Response regulator rec  46.8     9.6 0.00028   18.6   1.6   81    1-126     4-86  (127)
 39 >3gvp_A Adenosylhomocysteinase  46.8      16 0.00047   17.3   2.7  125   17-152    68-226 (256)
 40 >1a9x_B Carbamoyl phosphate sy  46.8      19 0.00057   16.8   3.1   30    1-34     38-68  (228)
 41 >2fex_A Conserved hypothetical  45.7      11 0.00032   18.3   1.7   49    1-49      2-53  (188)
 42 >2nlz_A Cephalosporin acylase;  44.5      19 0.00055   16.9   2.8   20   17-36     18-37  (38)
 43 >1o1x_A Ribose-5-phosphate iso  44.0      23 0.00068   16.3   3.3   37    1-40     13-51  (141)
 44 >3hbf_A Flavonoid 3-O-glucosyl  44.0      11 0.00033   18.2   1.5   98   16-126    30-147 (270)
 45 >1ny5_A Transcriptional regula  43.9      16 0.00047   17.3   2.3   79    1-124     1-79  (139)
 46 >2zkl_A Capsular polysaccharid  43.0      24  0.0007   16.2   3.5   37    1-40      1-37  (130)
 47 >3c1o_A Eugenol synthase; phen  43.0      24  0.0007   16.2   3.9   37    1-40      5-41  (321)
 48 >1n2s_A DTDP-4-, DTDP-glucose   42.8      15 0.00043   17.5   2.0   36    1-39      1-36  (299)
 49 >3c97_A Signal transduction hi  41.8      25 0.00073   16.1   3.7   54    1-93     11-64  (65)
 50 >1kew_A RMLB;, DTDP-D-glucose   41.4      23 0.00068   16.3   2.8  111    1-121     1-119 (342)
 51 >3l4b_C TRKA K+ channel protie  40.9      19 0.00056   16.8   2.3   36    1-40      1-36  (117)
 52 >3hdg_A Uncharacterized protei  39.6      27 0.00079   15.9   3.0   80    1-125     8-87  (137)
 53 >3h9u_A Adenosylhomocysteinase  39.5      27  0.0008   15.9   3.4  126   17-153    57-217 (251)
 54 >3he8_A Ribose-5-phosphate iso  36.9      30 0.00088   15.6   2.9   37    1-40      1-39  (128)
 55 >1vhq_A Enhancing lycopene bio  36.7      30 0.00088   15.6   4.0   38    3-40     11-51  (232)
 56 >2pk3_A GDP-6-deoxy-D-LYXO-4-h  36.3      30 0.00089   15.6   3.1   34    1-37     13-46  (321)
 57 >2ayx_A Sensor kinase protein   35.2      31 0.00093   15.5   2.7   81    1-126    13-93  (137)
 58 >2c1i_A Peptidoglycan glcnac d  35.0      32 0.00094   15.4   3.5   38    3-40      3-42  (196)
 59 >3gpi_A NAD-dependent epimeras  34.9      32 0.00094   15.4   3.2   40    1-43      3-42  (286)
 60 >1p2f_A Response regulator; DR  32.9      18 0.00052   17.0   1.1   78    1-91      3-80  (146)
 61 >2pzm_A Putative nucleotide su  30.8      37  0.0011   15.0   3.6   37    1-40     21-57  (184)
 62 >2r6j_A Eugenol synthase 1; ph  30.6      38  0.0011   15.0   4.6   38    1-41     12-49  (318)
 63 >3dhn_A NAD-dependent epimeras  30.5      38  0.0011   15.0   2.7  101    1-121     5-107 (227)
 64 >1efv_A Electron transfer flav  30.4      38  0.0011   15.0   5.0  111    1-124     2-117 (183)
 65 >2r25_B Osmosensing histidine   29.7      39  0.0012   14.9   2.8   85    1-125     3-89  (133)
 66 >1smk_A Malate dehydrogenase,   28.8      40  0.0012   14.8   3.1  108    1-123     9-122 (154)
 67 >1ys7_A Transcriptional regula  28.5      41  0.0012   14.8   3.3   82    1-127     8-89  (131)
 68 >3f5d_A Protein YDEA; unknow p  28.4      41  0.0012   14.8   3.2   43    1-43      3-47  (206)
 69 >1tmy_A CHEY protein, TMY; che  27.7      40  0.0012   14.8   2.2   81    1-125     3-83  (120)
 70 >1js1_X Transcarbamylase; alph  27.4      43  0.0013   14.7   4.0   31    9-39     14-44  (120)
 71 >2j48_A Two-component sensor k  26.1      45  0.0013   14.5   2.4   79    2-125     3-83  (119)
 72 >1pch_A Phosphocarrier protein  26.1      45  0.0013   14.5   3.1   77    2-80      4-80  (88)
 73 >1n57_A Chaperone HSP31, prote  25.2      47  0.0014   14.4   2.7   28   10-37     72-99  (291)
 74 >2yvt_A Hypothetical protein A  25.2      47  0.0014   14.4   4.5   42    1-42      6-47  (260)
 75 >2bka_A CC3, TAT-interacting p  24.7      44  0.0013   14.6   2.0   37    1-40     19-55  (242)
 76 >2vvr_A Ribose-5-phosphate iso  24.4      49  0.0014   14.3   4.5   38    1-40      2-40  (130)
 77 >1m1n_A Nitrogenase molybdenum  24.2      49  0.0014   14.3   2.6   57   80-152   170-226 (248)
 78 >1v4v_A UDP-N-acetylglucosamin  24.0      49  0.0015   14.3   8.0   98   16-125    21-123 (204)
 79 >1e6u_A GDP-fucose synthetase;  23.8      42  0.0012   14.7   1.7   36    1-39      4-39  (321)
 80 >1r6d_A TDP-glucose-4,6-dehydr  23.6      23 0.00069   16.3   0.4  114    1-124     1-125 (337)
 81 >1r8j_A KAIA; circadian clock   23.4      48  0.0014   14.4   2.0   30    1-33     10-39  (178)
 82 >3ccd_A Phosphocarrier protein  23.3      51  0.0015   14.2   2.7   78    2-81      5-82  (85)
 83 >1qyc_A Phenylcoumaran benzyli  23.2      51  0.0015   14.2   4.7  106    1-123     5-110 (308)
 84 >3d64_A Adenosylhomocysteinase  22.8      52  0.0015   14.1   3.2   65   17-89     89-159 (303)
 85 >2pn1_A Carbamoylphosphate syn  22.4      53  0.0016   14.1   4.2   71    1-91      5-80  (104)
 86 >1ptf_A Histidine-containing p  22.1      54  0.0016   14.0   2.7   76    2-81      5-82  (88)
 87 >1sy7_A Catalase 1; heme oxida  22.0      54  0.0016   14.0   3.0  110    2-123     5-124 (184)
 88 >2hpi_A DNA polymerase III alp  21.6      16 0.00048   17.2  -0.7   40    4-46     31-70  (83)
 89 >2oqr_A Sensory transduction p  21.6      55  0.0016   14.0   4.3   79    1-125     5-83  (101)
 90 >2vyo_A ECU11_0510, chitooligo  21.5      55  0.0016   14.0   4.1   33    2-34     27-61  (254)
 91 >1qkk_A DCTD, C4-dicarboxylate  21.4      56  0.0016   14.0   2.6   80    1-125     4-83  (155)
 92 >3enk_A UDP-glucose 4-epimeras  21.3      56  0.0017   13.9   3.2  113    1-124     6-127 (341)
 93 >1sph_A Histidine-containing p  21.1      57  0.0017   13.9   2.8   79    2-82      5-83  (88)
 94 >2w3z_A Putative deacetylase;   21.0      57  0.0017   13.9   2.8   12   64-75    113-124 (311)
 95 >2gkg_A Response regulator hom  20.9      57  0.0017   13.9   3.9   80    2-126     7-89  (127)
 96 >1vi1_A Fatty acid/phospholipi  20.4      28 0.00084   15.8   0.3   92    1-95      3-105 (345)
 97 >1v7c_A Threonine synthase; PL  20.3      43  0.0013   14.6   1.2   34   58-92     67-100 (109)
 98 >3da8_A Probable 5'-phosphorib  20.3      59  0.0017   13.8   2.4  118    1-127    13-148 (215)
 99 >2gt1_A Lipopolysaccharide hep  20.1      54  0.0016   14.0   1.7  101    1-120     1-110 (165)

No 1  
>>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} (A:)
Probab=100.00  E-value=0  Score=566.29  Aligned_cols=247  Identities=31%  Similarity=0.476  Sum_probs=235.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEE-EEEECCCHHHHHHHHHHHC
Q ss_conf             926882689868856999999998548919998179985650320224897058897110-4763272799999998750
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKK-RFAVHGTPVDCVVIALQKM   79 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~-~~~v~GtPaDcv~~~l~~l   79 (250)
                      +||||||||||+||||++|+++|++.| +|+||||++||||+|||+|+++|+++++++.. .|+|+|||||||++||++|
T Consensus         2 ~~ILlTNDDGi~a~Gl~~L~~~l~~~g-~V~VvAP~~~qSg~g~ait~~~p~~v~~~~~~~~~~v~GTPaDcV~~al~~l   80 (251)
T 2phj_A            2 PTFLLVNDDGYFSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFYTVIDGTPADCVHLGYRVI   80 (251)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEEEETTCCHHHHHHHHHHTT
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCC-CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             989997279888788999999998579-9999821898755736757899833477023442046894688888755554


Q ss_pred             CC-CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             46-45419997148885310233345777899889871898532220013567661478888849999999867786673
Q gi|255764489|r   80 SD-KKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQAYTYENMIPWEVSETHAPRVLRQLLKTQIPNTT  158 (250)
Q Consensus        80 ~~-~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~~~~~~~~~~~~a~~~~~~ii~~l~~~~~p~~~  158 (250)
                      ++ +||||||||||+|.|+|.+++|||||||||||+++||||||+|+++.  +..+|+.+++++.+++++++++++|.+.
T Consensus        81 ~~~~kPDLViSGIN~G~N~G~~v~~SGTVgAA~eaa~~GiPaIA~S~~~~--~~~~~~~a~~~~~~li~~l~~~~~~~~~  158 (251)
T 2phj_A           81 LEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR--ENIMFEEIAKVCVDIVKKVLNEGIPEDT  158 (251)
T ss_dssp             TTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS--SSCCHHHHHHHHHHHHHHHHHHCCCTTE
T ss_pred             CCCCCCEEEEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC--CCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             15887349991798926727052116677899999974998058862676--3320067899889999999742788562


Q ss_pred             EEECCCCCCCCHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCH
Q ss_conf             54314567881015883891376654355427840688651699723677778988550789968988990215356488
Q gi|255764489|r  159 LCNINFPRCSPEEVQKTVVTAQGKPCFSIDAKQISTNDNMSHYCLTFGDHLKNLCEKSDAFAIQHNMISVTPITTDLTDY  238 (250)
Q Consensus       159 vlNINiP~~~~~~ikg~k~t~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~e~TD~~Al~~GyISVTPL~~DlT~~  238 (250)
                      +||||||.++..++||+|+|+|+++.|...+.+..+++++.|||+.......+.+++||.+++++||||||||++|+|++
T Consensus       159 ~lNVNiP~~~~~~~~g~~~t~~~~~~~~~~~~~~~d~~g~~~~w~~~~~~~~~~~~~tD~~al~~G~ISVTpl~~d~t~~  238 (251)
T 2phj_A          159 YLNVNIPNLRYEEIKGIKVTRQGKRAYKERVFKYIDPYGKPFYWIAAEEFGWHAEEGTDYWAVLNGYVSVTPLHLDLTNY  238 (251)
T ss_dssp             EEEEEEESSCGGGCCEEEECBCCCCSSEEEEEEEECTTSCEEEEEEEESTTTTCCTTBHHHHHHTTEEEEEEEESCCBCG
T ss_pred             EEEEECCCCCHHHCCCCEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHCCEEEEEEECCCCCCH
T ss_conf             79860688874444653142024443233304667799967788546656778999978999869908981306287597


Q ss_pred             HHHHHHHHHHCC
Q ss_conf             999999987459
Q gi|255764489|r  239 NSQQYISLSLET  250 (250)
Q Consensus       239 ~~l~~L~~~l~~  250 (250)
                      +.|+.|++|+++
T Consensus       239 ~~l~~l~~~~~~  250 (251)
T 2phj_A          239 KVMKSIKYLEDS  250 (251)
T ss_dssp             GGGGGGGGGGC-
T ss_pred             HHHHHHHHHHHC
T ss_conf             999998788619


No 2  
>>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosphatase, mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A (A:1-233)
Probab=100.00  E-value=0  Score=556.63  Aligned_cols=231  Identities=29%  Similarity=0.447  Sum_probs=223.0

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEE-EEEECCCHHHHHHHHHHHC
Q ss_conf             926882689868856999999998548919998179985650320224897058897110-4763272799999998750
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKK-RFAVHGTPVDCVVIALQKM   79 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~-~~~v~GtPaDcv~~~l~~l   79 (250)
                      |||||||||||+||||++|+++|+++| +|+||||++||||+|||+|+++|++++++++. .|+|+|||||||++||+++
T Consensus         2 M~ILiTNDDGi~s~Gl~~L~~al~~~g-~V~VvAP~~~qSg~g~ait~~~pl~v~~~~~~~~~~v~GTPaDcv~~al~~l   80 (233)
T 2v4n_A            2 MRILLSNDDGVHAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNAL   80 (233)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCEEEECTTSCEEEETCCHHHHHHHHHHTT
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCC
T ss_conf             679997079889888999999998669-9899922999865614656899816899548258996388267898864101


Q ss_pred             CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf             46454199971488853102333457778998898718985322200135676614788888499999998677866735
Q gi|255764489|r   80 SDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQAYTYENMIPWEVSETHAPRVLRQLLKTQIPNTTL  159 (250)
Q Consensus        80 ~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~~~~~~~~~~~~a~~~~~~ii~~l~~~~~p~~~v  159 (250)
                      ++++|||||||||+|.|+|.+++||||||||+||+++||||||+|+++    ..+|+.+.+++.+++++++++++|+.++
T Consensus        81 ~~~~pDLViSGIN~G~N~G~~v~ySGTVgAA~eaa~~GipaiA~S~~~----~~~~~~a~~~~~~li~~l~~~~~~~~~~  156 (233)
T 2v4n_A           81 MRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNG----YQHYDTAAAVTCALLRGLSREPLRTGRI  156 (233)
T ss_dssp             SSSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEESS----SSCHHHHHHHHHHHHHHHHHSCCCSCSE
T ss_pred             CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCC----CCCHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf             579999899898389748864120178999999997599832897156----6454688876899998887557654317


Q ss_pred             EECCCCCCCCHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCC
Q ss_conf             43145678810158838913766543554278406886516997236777789885507899689889902153564
Q gi|255764489|r  160 CNINFPRCSPEEVQKTVVTAQGKPCFSIDAKQISTNDNMSHYCLTFGDHLKNLCEKSDAFAIQHNMISVTPITTDLT  236 (250)
Q Consensus       160 lNINiP~~~~~~ikg~k~t~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~e~TD~~Al~~GyISVTPL~~DlT  236 (250)
                      ||||||.++..+++|+|+|+|+++.|...+.+..+++++.|||+.......+.+++||.+++++||||||||++|||
T Consensus       157 lNVNiP~~~~~~~~g~~~t~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~tD~~a~~~G~isVTPl~~d~T  233 (233)
T 2v4n_A          157 LNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLT  233 (233)
T ss_dssp             EEEEECSSCGGGCCCEEECBCCEESCCCCEEEEECTTSCEEEEECCCCCEEECSTTBHHHHHHTTCEEEEEECSCCC
T ss_pred             EEEECCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHCCEEEEEEECCCCC
T ss_conf             89866898300378659775466244433211007999748998788777889998799999799489814575774


No 3  
>>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP, hydrolase; 2.05A {Thermus thermophilus HB8} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A (A:)
Probab=100.00  E-value=0  Score=548.60  Aligned_cols=236  Identities=31%  Similarity=0.425  Sum_probs=218.9

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEE-------EEEEEECCCHHHHHH
Q ss_conf             9268826898688569999999985489199981799856503202248970588971-------104763272799999
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTIS-------KKRFAVHGTPVDCVV   73 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~-------~~~~~v~GtPaDcv~   73 (250)
                      |||||||||||+||||++|+++|++.| +|+||||++||||+|||+|+++|+++.++.       .+.|+|+|||||||+
T Consensus         1 M~ILiTNDDGi~a~Gi~~L~~aL~~~g-~V~VvAP~~~qSg~g~ait~~~~l~~~~~~~~~~~~~~~~~~v~GTPaDcv~   79 (244)
T 2e6c_A            1 MRILVTNDDGIYSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCVA   79 (244)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHHH
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCHHHHHH
T ss_conf             959997279989766999999998669-9899951899853762455799806898335555788733898074068998


Q ss_pred             HHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             99875046454199971488853102333457778998898718985322200135676614788888499999998677
Q gi|255764489|r   74 IALQKMSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQAYTYENMIPWEVSETHAPRVLRQLLKTQ  153 (250)
Q Consensus        74 ~~l~~l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~~~~~~~~~~~~a~~~~~~ii~~l~~~~  153 (250)
                      +||+++  +||||||||||+|.|+|.+++|||||||||||+++||||||+|+++.. +..+|+.+++++.++++++++. 
T Consensus        80 ~al~~~--~~pDLViSGIN~G~N~G~~v~ySGTVgAA~eaa~~GiPaIA~S~~~~~-~~~~~~~a~~~~~~li~~~~~~-  155 (244)
T 2e6c_A           80 LGLHLF--GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVPLNG-EVPDFAGLRPWLLRTLETLLRL-  155 (244)
T ss_dssp             HHHHHS--CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEECCSS-SCCCHHHHHHHHHHHHHHHTTS-
T ss_pred             HHHHCC--CCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCC-CCCHHHHHHHHHHHHHHHHHHH-
T ss_conf             865136--898879968988517564252552777888888631354224420477-6520367999999999998742-


Q ss_pred             CCCCCEEECCCCCCCCHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCC
Q ss_conf             86673543145678810158838913766543554278406886516997236777789885507899689889902153
Q gi|255764489|r  154 IPNTTLCNINFPRCSPEEVQKTVVTAQGKPCFSIDAKQISTNDNMSHYCLTFGDHLKNLCEKSDAFAIQHNMISVTPITT  233 (250)
Q Consensus       154 ~p~~~vlNINiP~~~~~~ikg~k~t~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~e~TD~~Al~~GyISVTPL~~  233 (250)
                       |.+.+||||||.    ..+|+|+|+|+++.|...+.+..+++++.+||+. ++...+.+++||.+|+.+||||||||++
T Consensus       156 -~~~~~lNVN~P~----~~~gi~~tr~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~tD~~al~~G~isvTPl~~  229 (244)
T 2e6c_A          156 -ERPFLVNVNLPL----RPKGFLWTRQSVRAYEGVVIPGEDPMGRPFYWFA-PRPLKEAEEGTDRWAVAQGFVSATPLRL  229 (244)
T ss_dssp             -CSSCEEEEECCS----SCCEEEECBCCCCCEECCEEEEECTTSCEEEEEC-CEESSCCCTTBHHHHHHTTEEEEEEBCS
T ss_pred             -CCCEEEECCCCC----CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEC-CCCCCCCCCCCHHHHHHCCCEEEEEECC
T ss_conf             -210477202343----2221589850100235552334288885479967-8767778999899999789289802066


Q ss_pred             CCCCHHHHHHHHHH
Q ss_conf             56488999999987
Q gi|255764489|r  234 DLTDYNSQQYISLS  247 (250)
Q Consensus       234 DlT~~~~l~~L~~~  247 (250)
                      |||||+.|++|++|
T Consensus       230 d~t~~~~l~~l~~~  243 (244)
T 2e6c_A          230 DLTDETRLQPTLAH  243 (244)
T ss_dssp             CCBCTTCSSCCCCC
T ss_pred             CCCCHHHHHHHHCC
T ss_conf             77583888887667


No 4  
>>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} (A:1-233)
Probab=100.00  E-value=0  Score=542.40  Aligned_cols=229  Identities=29%  Similarity=0.407  Sum_probs=217.2

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEE----EEEEEEECCCHHHHHHHHH
Q ss_conf             926882689868856999999998548919998179985650320224897058897----1104763272799999998
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTI----SKKRFAVHGTPVDCVVIAL   76 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~----~~~~~~v~GtPaDcv~~~l   76 (250)
                      |||||||||||+||||++|+++|++. |+|+||||++||||+|||||+++|++++++    +.+.|+|+|||||||++||
T Consensus         1 M~ILlTNDDGi~spGi~aL~~~L~~~-~~V~VvAP~~~qSg~g~ait~~~~~~v~~~~~~~~~~~~~v~GTPaDcV~~gl   79 (233)
T 1j9j_A            1 MRILVTNDDGIQSKGIIVLAELLSEE-HEVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLAY   79 (233)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHTTT-SEEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHHH
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHH
T ss_conf             95999727998976799999998669-91999956998766603444799835555215888238984797089999666


Q ss_pred             HHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             75046454199971488853102333457778998898718985322200135676614788888499999998677866
Q gi|255764489|r   77 QKMSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQAYTYENMIPWEVSETHAPRVLRQLLKTQIPN  156 (250)
Q Consensus        77 ~~l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~~~~~~~~~~~~a~~~~~~ii~~l~~~~~p~  156 (250)
                      +++++++|||||||||+|.|+|.+++|||||||||||+++||||||+||++.  ...+|+.+++++.+++++++++++|+
T Consensus        80 ~~~~~~~pDLViSGIN~G~N~G~~v~~SGTVgAA~eAa~~GipaIA~S~~~~--~~~~~~~a~~~~~~li~~l~~~~~p~  157 (233)
T 1j9j_A           80 NVVMDKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSANY--ESPDFEGAARFLIDFLKEFDFSLLDP  157 (233)
T ss_dssp             HTTSTTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEESCS--SSCCHHHHHHHHHHHHHHCCGGGSCT
T ss_pred             HHHCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCCCCEEEECCCC--CCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             4102689888996654787565435530254588613246888047772668--87377999999999999998457765


Q ss_pred             CCEEECCCCCCCCHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCC
Q ss_conf             7354314567881015883891376654355427840688651699723677778988550789968988990215356
Q gi|255764489|r  157 TTLCNINFPRCSPEEVQKTVVTAQGKPCFSIDAKQISTNDNMSHYCLTFGDHLKNLCEKSDAFAIQHNMISVTPITTDL  235 (250)
Q Consensus       157 ~~vlNINiP~~~~~~ikg~k~t~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~e~TD~~Al~~GyISVTPL~~Dl  235 (250)
                      +++||||||..   +++|+|+|+|+++.|...+.+..+++++.+||+.......+.+++||.+|+++||||||||++||
T Consensus       158 ~~~lNVN~P~~---~~~g~~~t~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~tD~~al~~g~isVTPL~~dl  233 (233)
T 1j9j_A          158 FTMLNINVPAG---EIKGWRFTRQSRRRWNDYFEERVSPFGEKYYWMMGEVIEDDDRDDVDYKAVREGYVSITPIHPFL  233 (233)
T ss_dssp             TCEEEEEECSS---CCCEEEECBCCCCEEEEEEEEEECTTSCEEEEEEEEEECCCCCSSBHHHHHHTTEEEEEEECSCC
T ss_pred             CCCCCCCCCHH---HHCCCEEEEECCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCEEEEEECCCCC
T ss_conf             52036889836---60783788843104666410211899972799636766788999749999979908982326687


No 5  
>>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/beta protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} (A:)
Probab=100.00  E-value=0  Score=524.47  Aligned_cols=243  Identities=28%  Similarity=0.402  Sum_probs=214.1

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEE---EEEEECCCHHHHHHHHHH
Q ss_conf             92688268986885699999999854891999817998565032022489705889711---047632727999999987
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISK---KRFAVHGTPVDCVVIALQ   77 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~---~~~~v~GtPaDcv~~~l~   77 (250)
                      .||||||||||+||||++|+++|++.+ +|+||||++||||+|||+|+++|+++++++.   +.|+|+|||||||++||+
T Consensus         1 ~rILiTNDDGi~spGi~aL~~aL~~~~-~V~VvAP~~~qSg~g~a~t~~~~l~~~~v~~~~~~~~~v~GTPaDcV~~aL~   79 (280)
T 1l5x_A            1 XKILVTNDDGVHSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRXYEVDLCGFRAIATSGTPSDTVYLATF   79 (280)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHHH
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCC-CEEEEEECCCCCCCCCCEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHH
T ss_conf             969997479989778999999998569-9899941898776748875799856999615882489964770888988775


Q ss_pred             HCCCCCCCEEEECCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHHHH
Q ss_conf             504645419997148885310233-345777899889871898532220013567-----66147888884999999986
Q gi|255764489|r   78 KMSDKKPDLILSGVNVGTNTSNHV-AYSGTLAAAFEGSLQGIRSFALSQAYTYEN-----MIPWEVSETHAPRVLRQLLK  151 (250)
Q Consensus        78 ~l~~~~pDlViSGiN~G~N~g~~v-~ySGTvgAA~ea~~~GipsIAiS~~~~~~~-----~~~~~~a~~~~~~ii~~l~~  151 (250)
                      +++ ++|||||||||+|.|+|.++ +|||||||||||+++||||||+|+++....     ...|+.+.+++.++++++++
T Consensus        80 ~l~-~~pDLVvSGIN~G~N~G~~v~~~SGTVgAA~EAa~~GiPaIA~S~~~~~~~~~~~~~~a~~~a~~~v~~l~~~~~~  158 (280)
T 1l5x_A           80 GLG-RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAYLENWNELLNNKEAVEIXGAVVSSTASYVLK  158 (280)
T ss_dssp             HHT-SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEECCSCHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HCC-CCCCEEEECCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             138-9987899677776557835585579999999999709985255520268521002067899999999999999986


Q ss_pred             CCCCCC-CEEECCCCCCCCHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCEEEEC
Q ss_conf             778667-3543145678810158838913766543554278406886516997236777789885507899689889902
Q gi|255764489|r  152 TQIPNT-TLCNINFPRCSPEEVQKTVVTAQGKPCFSIDAKQISTNDNMSHYCLTFGDHLKNLCEKSDAFAIQHNMISVTP  230 (250)
Q Consensus       152 ~~~p~~-~vlNINiP~~~~~~ikg~k~t~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~e~TD~~Al~~GyISVTP  230 (250)
                      .++|.+ .+||||||.++..+ +|+++|+++++.|...+.+..+++++.|||.. +......++++|.+++++|||||||
T Consensus       159 ~~~~~~~~~lNVNiP~~~~~~-~g~~~t~~~~~~~~~~~~~~~d~~g~~~~~~~-~~~~~~~~~~~d~~~l~~G~isvTp  236 (280)
T 1l5x_A          159 NGXPQGVDVISVNFPRRLGRG-VRAKLVKAAKLRYAQQVVERVDPRGVRYYWLY-GRDLAPEPETDVYVVLKEGGIAITP  236 (280)
T ss_dssp             HCSCTTCSEEEEEECSCCCTT-CCEEECBCCSCSBCSCCEEEECTTSCEEEECS-CSBCCCCTTBHHHHHHTSCCEEEEE
T ss_pred             CCCCCCCCEECCCCCCCCCCC-CCEEEEEECCCCCCCCEEEEECCCCCEEEEEC-CCCCCCCCCCCHHHHHHCCEEEEEE
T ss_conf             389878834315787564557-83169982572467733785379998688505-8757899998899999799899804


Q ss_pred             CCCCCCCHHHHHHHHHH
Q ss_conf             15356488999999987
Q gi|255764489|r  231 ITTDLTDYNSQQYISLS  247 (250)
Q Consensus       231 L~~DlT~~~~l~~L~~~  247 (250)
                      |++|+|++..++.|+.|
T Consensus       237 L~~d~t~~~~l~~l~~~  253 (280)
T 1l5x_A          237 LTLNLNAVDAHREVDXD  253 (280)
T ss_dssp             ECCCCBSSCCBCCCCHH
T ss_pred             EECCCCCHHHHHHHCHH
T ss_conf             10158775888753699


No 6  
>>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} (A:1-171,A:340-364)
Probab=95.36  E-value=0.055  Score=32.34  Aligned_cols=112  Identities=12%  Similarity=0.019  Sum_probs=65.6

Q ss_pred             CEEEEECCC-CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEE------CCCHHHHH-
Q ss_conf             926882689-8688569999999985489199981799856503202248970588971104763------27279999-
Q gi|255764489|r    1 MRILLTNDD-GIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAV------HGTPVDCV-   72 (250)
Q Consensus         1 m~ILitNDD-G~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v------~GtPaDcv-   72 (250)
                      ||||++-.. |=...-+..|++.|.+.||+|.|+.+....+..-   -....+++..+....+.-      .-.+...- 
T Consensus         7 mrIL~v~~~~gG~~~~~~~la~~L~~~G~eV~v~~~~~~~~~~~---~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~   83 (196)
T 1f0k_A            7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADL---VPKHGIEIDFIRISGLRGKGIKALIAAPLRIFN   83 (196)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHH---GGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH---HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             87999917846879999999999997889799997887065544---444297089984578677778999986999999


Q ss_pred             -HHHHHH-CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             -999875-046454199971488853102333457778998898718985322200
Q gi|255764489|r   73 -VIALQK-MSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        73 -~~~l~~-l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                       ...+.. +...+||+|++-           ....+..+++.+...|+|-|-.-+.
T Consensus        84 ~~~~l~~~l~~~kpDiI~~~-----------~~~~~~~~~~~~~~~~ip~v~~~h~  128 (196)
T 1f0k_A           84 AWRQARAIMKAYKPDVVLGM-----------GGYVSGPGGLAAWSLGIPVVLHEQN  128 (196)
T ss_dssp             HHHHHHHHHHHHCCSEEEEC-----------SSTTHHHHHHHHHHTTCCEEEEECS
T ss_pred             HHHHHHHHHHCCCCCEEEEC-----------CCCCHHHHHHHHHHCCCCEEEEECC
T ss_conf             99999999750299789978-----------9734199999998669988998268


No 7  
>>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* (A:1-234,A:444-499)
Probab=95.26  E-value=0.23  Score=28.53  Aligned_cols=114  Identities=10%  Similarity=0.066  Sum_probs=67.1

Q ss_pred             CEEEEECCCCCCC----------------HHHHHHHHHHHHCCCCEEEECCCCCCCCEE------EEECCCCCEEEEEEE
Q ss_conf             9268826898688----------------569999999985489199981799856503------202248970588971
Q gi|255764489|r    1 MRILLTNDDGIKS----------------KGLITLENIARSISDDIWICAPEMDQSCLA------NSLTMSRNIACRTIS   58 (250)
Q Consensus         1 m~ILitNDDG~~a----------------~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~------~ait~~~~~~~~~~~   58 (250)
                      ||||+.+..+...                .-+..|++.|.+.||+|.|++|..+..-..      ........+...++.
T Consensus         8 mrIl~vs~~~~~~~~~~~~~~~P~~GG~~~~~~~La~~L~~~Gh~V~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~   87 (290)
T 2r60_A            8 KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIP   87 (290)
T ss_dssp             CEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEEC
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEEC
T ss_conf             35999868766674344658895989899999999999996699699994568888875456764236425966999946


Q ss_pred             EE---EEE------ECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             10---476------327279999999875046454199971488853102333457778998898718985322200
Q gi|255764489|r   59 KK---RFA------VHGTPVDCVVIALQKMSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        59 ~~---~~~------v~GtPaDcv~~~l~~l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                      ..   .+.      .......+....+ .....+||+|.+           ..+.....|++-+...|+|-|..-..
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~DiIh~-----------~~~~~~~~a~~~ar~~~iP~V~t~H~  152 (290)
T 2r60_A           88 FGGDKFLPKEELWPYLHEYVNKIINFY-REEGKFPQVVTT-----------HYGDGGLAGVLLKNIKGLPFTFTGHS  152 (290)
T ss_dssp             CSCSSCCCGGGCGGGHHHHHHHHHHHH-HHHTCCCSEEEE-----------EHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHCCCCEEEEE-----------CCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             786456678888899999999999999-972899739997-----------87427778888776329988999246


No 8  
>>2p6p_A Glycosyl transferase; GT-B family, X-RAY-diffraction,urdamycina- biosynthesis; 1.88A {Streptomyces fradiae} (A:1-200,A:368-384)
Probab=94.93  E-value=0.12  Score=30.31  Aligned_cols=110  Identities=15%  Similarity=0.120  Sum_probs=60.4

Q ss_pred             CEEEEECCCCCCCHH----HHHHHHHHHHCCCCEEEECCCCCCCCEEEEEC----CCCCEEEE-----EEEEEEEEECCC
Q ss_conf             926882689868856----99999999854891999817998565032022----48970588-----971104763272
Q gi|255764489|r    1 MRILLTNDDGIKSKG----LITLENIARSISDDIWICAPEMDQSCLANSLT----MSRNIACR-----TISKKRFAVHGT   67 (250)
Q Consensus         1 m~ILitNDDG~~a~g----l~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait----~~~~~~~~-----~~~~~~~~v~Gt   67 (250)
                      ||||+.-=   -+.|    +..|++.|.+.||+|+++.|....+-......    +.......     ..........+.
T Consensus         1 MkIli~~~---~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (217)
T 2p6p_A            1 MRILFVAA---GSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDP   77 (217)
T ss_dssp             CEEEEECC---SSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSH
T ss_pred             CEEEEECC---CCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCCCCCCHHH
T ss_conf             93999899---977589999999999998899899991852666787669757744874066540232245631131026


Q ss_pred             HHHH----------HHHH---HH-HCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             7999----------9999---87-5046454199971488853102333457778998898718985322200
Q gi|255764489|r   68 PVDC----------VVIA---LQ-KMSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        68 PaDc----------v~~~---l~-~l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                      ....          +.--   +. .+.+.+||+||++...             .+|..-|...|||.+.++..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~D~~~-------------~~~~~vA~~l~IP~v~~~~~  137 (217)
T 2p6p_A           78 VAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMS-------------YVAPLLALHLGVPHARQTWD  137 (217)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC-------------THHHHHHHHHTCCEEEECCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC-------------HHHHHHHHHHHCCCCEEECC
T ss_conf             7899999999999999999999999875065533034444-------------17889999851431001023


No 9  
>>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, binary complex; HET: GDP; 2.40A {Mycobacterium smegmatis str} PDB: 2gej_A* (A:1-197,A:367-406)
Probab=94.07  E-value=0.29  Score=27.91  Aligned_cols=114  Identities=11%  Similarity=0.068  Sum_probs=61.8

Q ss_pred             CEEEEECCCCC-CCHH----HHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHH
Q ss_conf             92688268986-8856----999999998548919998179985650320224897058897110476327279999999
Q gi|255764489|r    1 MRILLTNDDGI-KSKG----LITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIA   75 (250)
Q Consensus         1 m~ILitNDDG~-~a~g----l~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~   75 (250)
                      ||||+..+.-. ..-|    +..|.+.|.+.||+|.|+++..+...........-++.............-.+  .....
T Consensus        21 MkIl~v~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vi~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~   98 (237)
T 2gek_A           21 MRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGP--ATHRK   98 (237)
T ss_dssp             CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCH--HHHHH
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCEEEECCCCCCHHHHHCCH--HHHHH
T ss_conf             8899989986899988999999999999977998999941898877763032372699815676312220358--99999


Q ss_pred             HHH-CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             875-0464541999714888531023334577789988987189853222001
Q gi|255764489|r   76 LQK-MSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQAY  127 (250)
Q Consensus        76 l~~-l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~~  127 (250)
                      +.. +...+||+|.+--..-           ..-+++-+...++|-|......
T Consensus        99 l~~~l~~~~~DiI~~~~~~~-----------~~~~~~~~~~~~~p~v~~~h~~  140 (237)
T 2gek_A           99 VKKWIAEGDFDVLHIHEPNA-----------PSLSMLALQAAEGPIVATFHTS  140 (237)
T ss_dssp             HHHHHHHHCCSEEEEECCCS-----------SSHHHHHHHHEESSEEEEECCC
T ss_pred             HHHHHHHCCCCEEEEEEECC-----------CCHHHHHHHHCCCCCCEEEEEC
T ss_conf             99999860776368864033-----------2024667875289852144210


No 10 
>>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} (A:1-222,A:384-415)
Probab=93.68  E-value=0.095  Score=30.91  Aligned_cols=113  Identities=17%  Similarity=0.115  Sum_probs=56.7

Q ss_pred             CEEEEECCCCC-CCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHH-------HHH
Q ss_conf             92688268986-8856999999998548919998179985650320224897058897110476327279-------999
Q gi|255764489|r    1 MRILLTNDDGI-KSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPV-------DCV   72 (250)
Q Consensus         1 m~ILitNDDG~-~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPa-------Dcv   72 (250)
                      ||||+.--=+. +---+..|.++|.+.||+|+++.|...++-....---..++...........-...+.       ++.
T Consensus         1 MrIli~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (254)
T 1iir_A            1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDVRRFTTEAI   80 (254)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             97999889856489999999999998899799996833566676579869977986666542155213899999999999


Q ss_pred             HH---HHHHCC-CCC-CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99---987504-645-4199971488853102333457778998898718985322200
Q gi|255764489|r   73 VI---ALQKMS-DKK-PDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        73 ~~---~l~~l~-~~~-pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                      ..   .+..+. ..+ +|+|+++          .+   ...+..-|..+|||.+.++..
T Consensus        81 ~~~~~~~~~l~~~~~~~~~ii~d----------~~---~~~~~~vA~~lgiP~v~~~~~  126 (254)
T 1iir_A           81 ATQFDEIPAAAEGCAAVVTTGLL----------AA---AIGVRSVAEKLGIPYFYAFHC  126 (254)
T ss_dssp             HHHHHHHHHHTTTCSEEEEESCH----------HH---HHHHHHHHHHHTCCEEEEESS
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEE----------EC---HHHHHHHHHHHCCCEEEECCC
T ss_conf             99999999986104303500899----------72---558999999839980210255


No 11 
>>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate assisted catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* (A:1-222,A:411-438)
Probab=92.62  E-value=0.78  Score=25.31  Aligned_cols=115  Identities=12%  Similarity=0.000  Sum_probs=64.2

Q ss_pred             CEEEEECCCCCC--------CHH----HHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEE---EEEC
Q ss_conf             926882689868--------856----9999999985489199981799856503202248970588971104---7632
Q gi|255764489|r    1 MRILLTNDDGIK--------SKG----LITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKR---FAVH   65 (250)
Q Consensus         1 m~ILitNDDG~~--------a~g----l~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~---~~v~   65 (250)
                      ||||+.++.-.-        .-|    +..|.+.|.+.||+|.|+++.....-...... ...+.........   +...
T Consensus        21 mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   99 (250)
T 3c48_A           21 MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRV-AENLRVINIAAGPYEGLSKE   99 (250)
T ss_dssp             CEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEE-ETTEEEEEECCSCSSSCCGG
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEC-CCCEEEEECCCCCCCCCCHH
T ss_conf             78999846536300059998678999999999999977996999945898876330112-69728998047762334476


Q ss_pred             ----CCHHHHHHHHHHH-CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             ----7279999999875-0464541999714888531023334577789988987189853222001
Q gi|255764489|r   66 ----GTPVDCVVIALQK-MSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQAY  127 (250)
Q Consensus        66 ----GtPaDcv~~~l~~-l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~~  127 (250)
                          -.........+.. +...+||+|.+           -.+....-+.+-+...++|-+......
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~Diih~-----------~~~~~~~~~~~~~~~~~~p~v~~~h~~  155 (250)
T 3c48_A          100 ELPTQLAAFTGGMLSFTRREKVTYDLIHS-----------HYWLSGQVGWLLRDLWRIPLIHTAHTL  155 (250)
T ss_dssp             GGGGGHHHHHHHHHHHHHHHTCCCSEEEE-----------EHHHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEEE-----------CCCCHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             65788865327899999842799559998-----------774227899887650488525421454


No 12 
>>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} (A:1-173,A:358-374)
Probab=92.36  E-value=0.28  Score=28.06  Aligned_cols=87  Identities=8%  Similarity=0.161  Sum_probs=47.5

Q ss_pred             CEEEEECCCCCCCHH----HHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHH
Q ss_conf             926882689868856----9999999985489199981799856503202248970588971104763272799999998
Q gi|255764489|r    1 MRILLTNDDGIKSKG----LITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIAL   76 (250)
Q Consensus         1 m~ILitNDDG~~a~g----l~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l   76 (250)
                      ||||+..+.-...-|    +..|.+.|.+.||+|.++++..+..-.       ..++...+......-....--......
T Consensus         1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~   73 (190)
T 2iw1_A            1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP-------KAFELIQVPVKSHTNHGRNAEYYAWVQ   73 (190)
T ss_dssp             -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC-------TTCEEEECCCCCSSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC-------CCEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf             9899993777999989999999999999779969999667887888-------862899878645353111578999999


Q ss_pred             HHCCCCCCCEEEECCCCC
Q ss_conf             750464541999714888
Q gi|255764489|r   77 QKMSDKKPDLILSGVNVG   94 (250)
Q Consensus        77 ~~l~~~~pDlViSGiN~G   94 (250)
                      ..+...+||+|.+--...
T Consensus        74 ~~~~~~~~Div~~~~~~~   91 (190)
T 2iw1_A           74 NHLKEHPADRVVGFNKMP   91 (190)
T ss_dssp             HHHHHSCCSEEEESSCCT
T ss_pred             HHHHHCCCCEEEEECCCC
T ss_conf             999855775699730432


No 13 
>>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding; HET: ADP; 2.30A {Agrobacterium tumefaciens} (A:1-259,A:460-485)
Probab=92.31  E-value=0.14  Score=29.94  Aligned_cols=39  Identities=13%  Similarity=0.076  Sum_probs=30.3

Q ss_pred             CEEEEECCCCCC---CHH----HHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             926882689868---856----999999998548919998179985
Q gi|255764489|r    1 MRILLTNDDGIK---SKG----LITLENIARSISDDIWICAPEMDQ   39 (250)
Q Consensus         1 m~ILitNDDG~~---a~g----l~~l~~~l~~~~~~v~vvAP~~~~   39 (250)
                      ||||+.+.-=.-   ..|    ...|.++|++.||+|.|+.|.-..
T Consensus         1 MkIl~vs~e~~P~~k~GGl~~~v~~La~~L~~~GheV~Vit~~~~~   46 (285)
T 1rzu_A            1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPA   46 (285)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHH
T ss_pred             CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             9899998866061135779999999999999869969999669875


No 14 
>>1rrv_A Glycosyltransferase GTFD; GT-B, rossmann fold; HET: DVV TYD; 2.00A {Amycolatopsis orientalis} (A:1-221,A:381-416)
Probab=91.06  E-value=0.11  Score=30.55  Aligned_cols=113  Identities=12%  Similarity=0.058  Sum_probs=57.7

Q ss_pred             CEEEEECCCCC-CCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE-E---CCCCCEEEEEE-EEEE---EEECCCHHHH
Q ss_conf             92688268986-8856999999998548919998179985650320-2---24897058897-1104---7632727999
Q gi|255764489|r    1 MRILLTNDDGI-KSKGLITLENIARSISDDIWICAPEMDQSCLANS-L---TMSRNIACRTI-SKKR---FAVHGTPVDC   71 (250)
Q Consensus         1 m~ILitNDDG~-~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~a-i---t~~~~~~~~~~-~~~~---~~v~GtPaDc   71 (250)
                      ||||+.-=-+. +-.-+..|+++|++.||+|+++.+...++-.... +   .+......... ....   ....-.+.+.
T Consensus         1 MrILl~p~~~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (257)
T 1rrv_A            1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMT   80 (257)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             95999889876789999999999998899899996856777898779759986872665124552023357899879999


Q ss_pred             HHHH---HHHCCC--CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             9999---875046--454199971488853102333457778998898718985322200
Q gi|255764489|r   72 VVIA---LQKMSD--KKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        72 v~~~---l~~l~~--~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                      ...-   +..+..  .++|+||++             .=+..+..-|..+|||.+.++..
T Consensus        81 ~~~~~~~~~~l~~~~~~~d~vi~d-------------~~~~~~~~vA~~~gIP~v~~~~~  127 (257)
T 1rrv_A           81 VEMQFDAVPGAAEGCAAVVAVGDL-------------AAATGVRSVAEKLGLPFFYSVPS  127 (257)
T ss_dssp             HHHHHHHHHHHTTTCSEEEEEECH-------------HHHHHHHHHHHHHTCCEEEEESS
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEEC-------------CHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             999999999998438980999968-------------31569999999852033433456


No 15 
>>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A (A:1-259,A:461-485)
Probab=90.85  E-value=0.25  Score=28.29  Aligned_cols=112  Identities=14%  Similarity=0.087  Sum_probs=63.2

Q ss_pred             CEEEEECCCCC---CCHH----HHHHHHHHHHCCCCEEEECCCCCCCCEE-----EEEC---CCCCEEEEEE---EEEEE
Q ss_conf             92688268986---8856----9999999985489199981799856503-----2022---4897058897---11047
Q gi|255764489|r    1 MRILLTNDDGI---KSKG----LITLENIARSISDDIWICAPEMDQSCLA-----NSLT---MSRNIACRTI---SKKRF   62 (250)
Q Consensus         1 m~ILitNDDG~---~a~g----l~~l~~~l~~~~~~v~vvAP~~~~S~~~-----~ait---~~~~~~~~~~---~~~~~   62 (250)
                      ||||+-+..-.   ...|    ...|+++|++.||+|.|++|....---.     ....   .....++.+.   +...|
T Consensus         1 MkIL~is~e~~P~~~~GG~~~~v~~La~~L~~~Gh~V~V~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   80 (284)
T 2qzs_A            1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY   80 (284)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred             CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCEEEEEEECCCEEEEEEEEEECCCEEE
T ss_conf             98999977362655566199999999999997699699997898561134677558889714773788999998895599


Q ss_pred             E------------------ECCCHHHHHHHHHHH------C----CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             6------------------327279999999875------0----46454199971488853102333457778998898
Q gi|255764489|r   63 A------------------VHGTPVDCVVIALQK------M----SDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGS  114 (250)
Q Consensus        63 ~------------------v~GtPaDcv~~~l~~------l----~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~  114 (250)
                      .                  ..+....+..+++..      +    ...+||+|-+          .-.+++-+++...+.
T Consensus        81 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDVIH~----------h~~~~~~~~~~~~~~  150 (284)
T 2qzs_A           81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHA----------HDWHAGLAPAYLAAR  150 (284)
T ss_dssp             EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEE----------ETGGGTTHHHHHHHT
T ss_pred             EECCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE----------CCCHHHHHHHHHHCC
T ss_conf             9458355137787677854455411577888875555555431134678868996----------460576667887334


Q ss_pred             HHCCCCCC
Q ss_conf             71898532
Q gi|255764489|r  115 LQGIRSFA  122 (250)
Q Consensus       115 ~~GipsIA  122 (250)
                      ..++|-+-
T Consensus       151 ~~~ip~V~  158 (284)
T 2qzs_A          151 GRPAKSVF  158 (284)
T ss_dssp             TCSSEEEE
T ss_pred             CCCCCEEE
T ss_conf             67777899


No 16 
>>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} (A:1-191,A:370-394)
Probab=89.89  E-value=1.4  Score=23.75  Aligned_cols=112  Identities=11%  Similarity=0.112  Sum_probs=58.9

Q ss_pred             CEEEEECCCCCC--CHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHH--HHHHHH
Q ss_conf             926882689868--8569999999985489199981799856503202248970588971104763272799--999998
Q gi|255764489|r    1 MRILLTNDDGIK--SKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVD--CVVIAL   76 (250)
Q Consensus         1 m~ILitNDDG~~--a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaD--cv~~~l   76 (250)
                      |||+++--..+.  +--+..|++.|.+.||+|.|++|.....-..    ....+.+..+....+-.-..+.-  .....+
T Consensus        16 mkI~~v~~p~~GG~~~~~~~la~~L~~~G~eV~vit~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l   91 (216)
T 2jjm_A           16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK----VYPNIYFHEVTVNQYSVFQYPPYDLALASKM   91 (216)
T ss_dssp             CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C----CCTTEEEECCCCC----CCSCCHHHHHHHHH
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC----CCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf             779998999999699999999999997799899994799864211----3797069970456666101560358999999


Q ss_pred             HH-CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH--HCCCCCCCCCC
Q ss_conf             75-0464541999714888531023334577789988987--18985322200
Q gi|255764489|r   77 QK-MSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSL--QGIRSFALSQA  126 (250)
Q Consensus        77 ~~-l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~--~GipsIAiS~~  126 (250)
                      .. +...+||+|.+-     .     .++....|.+-..+  .++|-+.-...
T Consensus        92 ~~~i~~~~~DiIh~h-----~-----~~~~~~~~~l~~~~~~~~ip~v~~~h~  134 (216)
T 2jjm_A           92 AEVAQRENLDILHVH-----Y-----AIPHAICAYLAKQMIGERIKIVTTLHG  134 (216)
T ss_dssp             HHHHHHHTCSEEEEC-----S-----STTHHHHHHHHHHHTTTCSEEEEECCH
T ss_pred             HHHHHHHCCCEEEEC-----C-----CCCHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             999887098489832-----4-----331168999998750567733553112


No 17 
>>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthase, two rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* (A:1-226,A:415-439)
Probab=89.04  E-value=0.64  Score=25.83  Aligned_cols=43  Identities=16%  Similarity=0.269  Sum_probs=31.9

Q ss_pred             CEEEEECCCCCC--CHH----HHHHHHHHHHCCCCEEEECCCCCCCCEE
Q ss_conf             926882689868--856----9999999985489199981799856503
Q gi|255764489|r    1 MRILLTNDDGIK--SKG----LITLENIARSISDDIWICAPEMDQSCLA   43 (250)
Q Consensus         1 m~ILitNDDG~~--a~g----l~~l~~~l~~~~~~v~vvAP~~~~S~~~   43 (250)
                      ||||+-+..-.-  ..|    ...|.++|.+.||+|.|++|+.......
T Consensus         3 MkIl~i~~~~pp~~~GG~~~~~~~L~~~L~~~Gh~V~v~t~~~~~~~~~   51 (251)
T 3fro_A            3 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGE   51 (251)
T ss_dssp             CEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCE
T ss_pred             EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHH
T ss_conf             0899988856974568799999999999997699899991589865544


No 18 
>>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} (A:1-222,A:386-430)
Probab=88.10  E-value=0.24  Score=28.40  Aligned_cols=113  Identities=13%  Similarity=0.062  Sum_probs=60.9

Q ss_pred             CEEEEECCCCC-CCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCC--EEEEEEEEEEEEECCCHHH-------
Q ss_conf             92688268986-8856999999998548919998179985650320224897--0588971104763272799-------
Q gi|255764489|r    1 MRILLTNDDGI-KSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRN--IACRTISKKRFAVHGTPVD-------   70 (250)
Q Consensus         1 m~ILitNDDG~-~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~--~~~~~~~~~~~~v~GtPaD-------   70 (250)
                      ||||+.-=-|. +---+..|++.|.+.||+|+++.|...++-....-.-..+  ..+.........-.+.+.+       
T Consensus         8 ~~Illv~~p~~GHi~P~l~LA~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (267)
T 2iyf_A            8 AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLN   87 (267)
T ss_dssp             CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             88999388526389999999999997899899996810666788669857883577873223513456678999999999


Q ss_pred             ----HHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             ----99999875046454199971488853102333457778998898718985322200
Q gi|255764489|r   71 ----CVVIALQKMSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        71 ----cv~~~l~~l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                          ++.-.+..+.+.+||+||+...             ..++..-|..+|||.+.++..
T Consensus        88 ~~~~~~~~l~~~l~~~~~d~Iv~d~~-------------~~~~~~vA~~l~IP~v~~~~~  134 (267)
T 2iyf_A           88 DAIQALPQLADAYADDIPDLVLHDIT-------------SYPARVLARRWGVPAVSLSPN  134 (267)
T ss_dssp             HHHHHHHHHHHHHTTSCCSEEEEETT-------------CHHHHHHHHHHTCCEEEEESS
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCC-------------CCHHHHHHHHCCCCEEEECCC
T ss_conf             99999999999985559829997575-------------406788999829998995056


No 19 
>>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A (A:1-192,A:357-375)
Probab=85.38  E-value=2.8  Score=21.93  Aligned_cols=118  Identities=13%  Similarity=0.044  Sum_probs=62.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE--EECCCCCEEEEEE--EEEEEEECCCHHHHHHHHH
Q ss_conf             92688268986885699999999854891999817998565032--0224897058897--1104763272799999998
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLAN--SLTMSRNIACRTI--SKKRFAVHGTPVDCVVIAL   76 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~--ait~~~~~~~~~~--~~~~~~v~GtPaDcv~~~l   76 (250)
                      ||||+.-..-=+.--...|.++|++.++++.+..-...++....  .+..........+  ........-.|.++..-..
T Consensus         9 ~kIli~ags~g~~~~~~~li~~L~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (211)
T 3beo_A            9 LKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGLEGLD   88 (211)
T ss_dssp             EEEEEEECSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHHHHHHHH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf             56999997267299999999999838789888999916878999999997199988111058899779999999999889


Q ss_pred             HHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             7504645419997148885310233345777899889871898532220013
Q gi|255764489|r   77 QKMSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQAYT  128 (250)
Q Consensus        77 ~~l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~~~  128 (250)
                      ..+...+||+|+..=....          ++.+++.|..+|||-+-+.+...
T Consensus        89 ~~l~~~kPD~V~v~~~~~~----------~l~~~laA~~~~IPvv~~~~~~~  130 (211)
T 3beo_A           89 KVMKEAKPDIVLVHGDTTT----------TFIASLAAFYNQIPVGHVEAGLR  130 (211)
T ss_dssp             HHHHHHCCSEEEEETTSHH----------HHHHHHHHHHTTCCEEEESCCCC
T ss_pred             HHHHHCCCCEEEEECCCCC----------CHHHHHHHHHCCCEEEEEECCCC
T ss_conf             9887447550442014564----------20158888730631799852455


No 20 
>>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent enzyme, lyase, cytoplasm, acid resistance; HET: LLP; 2.4A {Escherichia coli} (A:1-139)
Probab=84.22  E-value=2.3  Score=22.37  Aligned_cols=88  Identities=10%  Similarity=0.137  Sum_probs=55.9

Q ss_pred             CEEEEECCCCCCCH-----HHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHH
Q ss_conf             92688268986885-----6999999998548919998179985650320224897058897110476327279999999
Q gi|255764489|r    1 MRILLTNDDGIKSK-----GLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIA   75 (250)
Q Consensus         1 m~ILitNDDG~~a~-----gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~   75 (250)
                      ||||+..||-....     .++.|.+.++..|++|..+ .+                               .    .-|
T Consensus         1 mrILiVDD~~~~~~~~~~~~~~~l~~~L~~~g~~v~~a-~s-------------------------------~----~~a   44 (139)
T 2vyc_A            1 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKS-TS-------------------------------F----DDG   44 (139)
T ss_dssp             CEEEEECCTTSTTSHHHHHHHHHHHHHHHHTTCEEEEE-SS-------------------------------H----HHH
T ss_pred             CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEE-CC-------------------------------H----HHH
T ss_conf             96999925455767401157999999998689189984-87-------------------------------8----999


Q ss_pred             HHHCCC-CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             875046-454199971488853102333457778998898718985322200
Q gi|255764489|r   76 LQKMSD-KKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        76 l~~l~~-~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                      +..+.. .+||+||.-++...--|.+..  -.+=.........+|-|.+|-.
T Consensus        45 l~~l~~~~~~DliilD~~mP~~dG~e~~--~~l~~~~~~~~~~iPii~lt~~   94 (139)
T 2vyc_A           45 FAILSSNEAIDCLMFSYQMEHPDEHQNV--RQLIGKLHERQQNVPVFLLGDR   94 (139)
T ss_dssp             HHHHTTTCCCSEEEEECCCCSHHHHHHH--HHHHHHHHHHSTTCCEEEEECH
T ss_pred             HHHHHHCCCCCEEEEEECCCCCCCCHHH--HHHHHHHHHHCCCCCEEEEECC
T ss_conf             9999757787689997047784200459--9999999973889998999556


No 21 
>>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* (A:1-154,A:320-342)
Probab=83.80  E-value=2.9  Score=21.81  Aligned_cols=93  Identities=9%  Similarity=0.025  Sum_probs=53.6

Q ss_pred             CEEEEECCCCCCC-------------HHH----HHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEE
Q ss_conf             9268826898688-------------569----99999998548919998179985650320224897058897110476
Q gi|255764489|r    1 MRILLTNDDGIKS-------------KGL----ITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFA   63 (250)
Q Consensus         1 m~ILitNDDG~~a-------------~gl----~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~   63 (250)
                      ||||.-++.....             -|+    ..|++.|.+.|++|+|++|...+.-...-          ....-.+ 
T Consensus         4 MrIl~i~~~~~~~~~~i~~~~~~~~~GG~e~~v~~L~~~L~~~G~ev~v~~~~~~~~~~~~~----------~~~~~~~-   72 (177)
T 2iuy_A            4 LKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLXDGLLELGHEVFLLGAPGSPAGRPGL----------TVVPAGE-   72 (177)
T ss_dssp             CEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCSTTE----------EECSCCS-
T ss_pred             CEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC----------EECCCCH-
T ss_conf             37999866656777776757989998829999999999999769989999579986667763----------0068541-


Q ss_pred             ECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             327279999999875046454199971488853102333457778998898718985322200
Q gi|255764489|r   64 VHGTPVDCVVIALQKMSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        64 v~GtPaDcv~~~l~~l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                              ..-....+...+||+|-+.--...-.              -+...|+|-|.....
T Consensus        73 --------~~~l~~~i~~~~pDIVH~h~~~~~~~--------------~a~~~~~p~V~t~H~  113 (177)
T 2iuy_A           73 --------PEEIERWLRTADVDVVHDHSGGVIGP--------------AGLPPGTAFISSHHF  113 (177)
T ss_dssp             --------HHHHHHHHHHCCCSEEEECSSSSSCS--------------TTCCTTCEEEEEECS
T ss_pred             --------HHHHHHHHHHCCCCEEEECCCCHHHH--------------HHHCCCCEEEEEECC
T ss_conf             --------99999999876998999877310448--------------984559728998324


No 22 
>>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* (A:1-232,A:393-413)
Probab=77.59  E-value=1.7  Score=23.20  Aligned_cols=40  Identities=13%  Similarity=-0.005  Sum_probs=27.7

Q ss_pred             CEEEEECCC-CCC--CHHHH---HHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             926882689-868--85699---99999985489199981799856
Q gi|255764489|r    1 MRILLTNDD-GIK--SKGLI---TLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         1 m~ILitNDD-G~~--a~gl~---~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      ||||+..+- ...  .-|.+   .|++.|.+.||+|.|+++.....
T Consensus        47 MkIl~v~~~~~p~~~gGg~~~~~~La~~L~~~GheV~vit~~~~~~   92 (253)
T 2x0d_A           47 KRLNLLVPSINQEHXFGGISTALKLFEQFDNKKFKKRIILTDATPN   92 (253)
T ss_dssp             CEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCC
T ss_pred             CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             7799996728999888789999999999997799889998279997


No 23 
>>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} (D:12-112)
Probab=75.54  E-value=4.3  Score=20.77  Aligned_cols=32  Identities=22%  Similarity=0.225  Sum_probs=25.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECC
Q ss_conf             92688268986885699999999854891999817
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAP   35 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP   35 (250)
                      |||||..||...   .+.+.+.|+..|++|..+..
T Consensus         2 ~rILiVdD~~~~---~~~l~~~L~~~g~~v~~a~~   33 (101)
T 1qo0_D            2 LQVLVLNPPGEV---SDALVLQLIRIGCSVRQCWP   33 (101)
T ss_dssp             CEEEEESCTTHH---HHHHHHHHHHHTCEEEEECS
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEECCCC
T ss_conf             869999678989---99999999987997762699


No 24 
>>1p80_A Catalase HPII; beta barrel, channel, variant, oxidoreductase; HET: HEM; 1.65A {Escherichia coli} (A:582-753)
Probab=71.29  E-value=2.4  Score=22.33  Aligned_cols=47  Identities=9%  Similarity=0.150  Sum_probs=39.6

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECC
Q ss_conf             26882689868856999999998548919998179985650320224
Q gi|255764489|r    2 RILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTM   48 (250)
Q Consensus         2 ~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~   48 (250)
                      ||++---||++...+..+.++++..+++|.+++|+...--.+..+++
T Consensus        21 ~v~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~v~~~~g~~v   67 (172)
T 1p80_A           21 VVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVL   67 (172)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSSEEECTTSCEE
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCEE
T ss_conf             79999678878899999999999779937998136564565899672


No 25 
>>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A* 1pn3_A* 1pnv_A* (A:1-205,A:366-404)
Probab=70.61  E-value=2.3  Score=22.37  Aligned_cols=113  Identities=13%  Similarity=0.044  Sum_probs=60.3

Q ss_pred             CEEEEECCCCC-CCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE----CCCCCEEE-EE-EEE----EEEEECCCHH
Q ss_conf             92688268986-88569999999985489199981799856503202----24897058-89-711----0476327279
Q gi|255764489|r    1 MRILLTNDDGI-KSKGLITLENIARSISDDIWICAPEMDQSCLANSL----TMSRNIAC-RT-ISK----KRFAVHGTPV   69 (250)
Q Consensus         1 m~ILitNDDG~-~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ai----t~~~~~~~-~~-~~~----~~~~v~GtPa   69 (250)
                      ||||+..=-+. +-.-+..|+++|.+.||+|+++.+....+-....-    ++..++.. .. ...    ........-.
T Consensus         1 MrIll~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~~~~~~~~~v~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (244)
T 3h4t_A            1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA   80 (244)
T ss_dssp             -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf             96999915883479999999999998799899997824778998779848987825887735966666899999999999


Q ss_pred             HHHHHHHHHCC-CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99999987504-6454199971488853102333457778998898718985322200
Q gi|255764489|r   70 DCVVIALQKMS-DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        70 Dcv~~~l~~l~-~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                      .+...-+..+. ..++|+||+.             .-...|..-|..+|||.+.++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~vi~d-------------~~~~~a~~vA~~lgIP~v~~~~~  125 (244)
T 3h4t_A           81 EWFDKVPAAIEGCDAVVTTGLL-------------PAAVAVRSMAEKLGIPYRYTVLS  125 (244)
T ss_dssp             HHHHHHHHHHTTCSEEEEEECH-------------HHHHHHHHHHHHHTCCEEEEESS
T ss_pred             HHHHHHHHHHCCCCEEEECCCC-------------HHHHHHHHHHHHHCCCEEECCCC
T ss_conf             9999999874599999999863-------------37889999999819984630457


No 26 
>>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} (A:1-125)
Probab=65.78  E-value=6.6  Score=19.61  Aligned_cols=73  Identities=10%  Similarity=0.170  Sum_probs=49.2

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      |||||-+.-+..    +.|.+++++.|.+|.++.|..+..+...+             ++.+.++=+..|-+.---   .
T Consensus        12 kkilIiG~G~~~----~~l~~~a~~~g~~~~~~~~~~~~~~~~~a-------------d~~~~~~~~d~~~i~~~a---~   71 (125)
T 1kjq_A           12 TRVMLLGSGELG----KEVAIECQRLGVEVIAVDRYADAPAMHVA-------------HRSHVINMLDGDALRRVV---E   71 (125)
T ss_dssp             CEEEEESCSHHH----HHHHHHHHTTTCEEEEEESSTTCGGGGGS-------------SEEEECCTTCHHHHHHHH---H
T ss_pred             CEEEEECCCHHH----HHHHHHHHHCCCEEEEEECCCCCCHHHHC-------------CEEEECCCCCHHHHHHHH---H
T ss_conf             899998978999----99999999879989999799998267625-------------506871788999999999---9


Q ss_pred             CCCCCEEEECCCC
Q ss_conf             6454199971488
Q gi|255764489|r   81 DKKPDLILSGVNV   93 (250)
Q Consensus        81 ~~~pDlViSGiN~   93 (250)
                      ...+|.|++|.-+
T Consensus        72 ~~~vd~v~~~~~~   84 (125)
T 1kjq_A           72 LEKPHYIVPEIEA   84 (125)
T ss_dssp             HHCCSEEEECSSC
T ss_pred             HHCCCEEECCCCC
T ss_conf             8399999827762


No 27 
>>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} (A:1-245,A:408-424)
Probab=64.92  E-value=7.5  Score=19.30  Aligned_cols=110  Identities=15%  Similarity=0.086  Sum_probs=57.9

Q ss_pred             CEEEEECCCCC-CCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE-EC---CCCCEEEEEEEEEEEEECCCHHH-----
Q ss_conf             92688268986-8856999999998548919998179985650320-22---48970588971104763272799-----
Q gi|255764489|r    1 MRILLTNDDGI-KSKGLITLENIARSISDDIWICAPEMDQSCLANS-LT---MSRNIACRTISKKRFAVHGTPVD-----   70 (250)
Q Consensus         1 m~ILitNDDG~-~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~a-it---~~~~~~~~~~~~~~~~v~GtPaD-----   70 (250)
                      ||||+..--+. +---+..|+++|.+.||+|+++.|.....-..+. ++   +..+..  ..............+     
T Consensus        13 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   90 (262)
T 2iya_A           13 RHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILP--KESNPEESWPEDQESAMGLF   90 (262)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCCCSC--CTTCTTCCCCSSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCEEEECCCCCC--CCCCCCCCCHHHHHHHHHHH
T ss_conf             9489989861637999999999999789989999682166678756985661177663--10132223504578999999


Q ss_pred             -----HHHHHHHH-CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             -----99999875-04645419997148885310233345777899889871898532220
Q gi|255764489|r   71 -----CVVIALQK-MSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQ  125 (250)
Q Consensus        71 -----cv~~~l~~-l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~  125 (250)
                           -....+.. +...+||+||+....+.             +..-|..+|||.+.++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~d~ii~d~~~~~-------------~~~vA~~~giP~v~~~~  138 (262)
T 2iya_A           91 LDEAVRVLPQLEDAYADDRPDLIVYDIASWP-------------APVLGRKWDIPFVQLSP  138 (262)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCSEEEEETTCTH-------------HHHHHHHHTCCEEEEES
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEECCCCHH-------------HHHHHHHHHCCEEEEEC
T ss_conf             9999999999999984469838951332216-------------99999985145489841


No 28 
>>3d0r_A Protein CALG3; calicheamicin synthesis, glycosyltransferase, enediyne antibiotic; HET: PE4; 1.90A {Micromonospora echinospora} PDB: 3d0q_A* (A:1-222,A:384-398)
Probab=64.48  E-value=8.9  Score=18.82  Aligned_cols=112  Identities=17%  Similarity=0.177  Sum_probs=59.9

Q ss_pred             CEEEEECC--CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCC---CCEEEEEEE---------------EE
Q ss_conf             92688268--98688569999999985489199981799856503202248---970588971---------------10
Q gi|255764489|r    1 MRILLTND--DGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMS---RNIACRTIS---------------KK   60 (250)
Q Consensus         1 m~ILitND--DG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~---~~~~~~~~~---------------~~   60 (250)
                      ||||+.-=  -|- ---+..|+++|.+.||+|+++.|..........++..   .........               ..
T Consensus        21 ~~Il~~p~~~~GH-~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (237)
T 3d0r_A           21 MRVLFVSSPGIGH-LFPLIQLAWGFRTAGHDVLIAVAEHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATR   99 (237)
T ss_dssp             CEEEEECCSSTTS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHTBTCEEEESCTTCCHHHHHHHHHHHCHHHHHTGGGS
T ss_pred             EEEEEECCCCCCH-HHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHCCC
T ss_conf             7999965897420-458899876111468616764032100466458557750686278999999850483066552257


Q ss_pred             ----EEEECCCHHHHHHH---HHHH-CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             ----47632727999999---9875-046454199971488853102333457778998898718985322200
Q gi|255764489|r   61 ----RFAVHGTPVDCVVI---ALQK-MSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        61 ----~~~v~GtPaDcv~~---~l~~-l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                          .+..-..-.+...-   .+.. +...+||+||+....          .   .|..-|..+|||.+.++..
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vI~D~~~----------~---~~~~vA~~lgiP~v~~~~~  160 (237)
T 3d0r_A          100 PAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGA----------T---VGLLAADRAGVPAVQRNQS  160 (237)
T ss_dssp             CCSCSGGGHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC----------H---HHHHHHHHHTCCEEEECCS
T ss_pred             CCCCHHHHCEEEEECCCCCCCCEEEHHCCCCCCEEEEECCC----------E---EEEEECCCCCCCHHHCCHH
T ss_conf             65367884404334157454660120105678658984486----------4---5554124458834430457


No 29 
>>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} (A:)
Probab=56.97  E-value=11  Score=18.20  Aligned_cols=41  Identities=20%  Similarity=0.146  Sum_probs=31.2

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE
Q ss_conf             92688268986885699999999854891999817998565032
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLAN   44 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~   44 (250)
                      ||||||=--|+=..   .|++.|.+.||+|.+..........-.
T Consensus         1 MkIlVtGatGfIG~---~l~~~L~~~G~~v~~~~r~~~~~~~~~   41 (273)
T 2ggs_A            1 MRTLITGASGQLGI---ELSRLLSERHEVIKVYNSSEIQGGYKL   41 (273)
T ss_dssp             CCEEEETTTSHHHH---HHHHHHTTTSCEEEEESSSCCTTCEEC
T ss_pred             CEEEEECCCCHHHH---HHHHHHHCCCCEEEEECCCCCCCCEEE
T ss_conf             98999899988999---999999729989999778766775156


No 30 
>>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, symmetric dimer, signaling protein; NMR {Helicobacter pylori J99} (A:1-99)
Probab=56.66  E-value=7.6  Score=19.25  Aligned_cols=31  Identities=16%  Similarity=0.042  Sum_probs=23.1

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             9268826898688569999999985489199981
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICA   34 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvA   34 (250)
                      |||||.-||--.   -+.+.+.|+..|++|.++.
T Consensus         1 mrILiVeDd~~~---~~~i~~~L~~~g~~v~~a~   31 (99)
T 2hqr_A            1 MRVLLIEKNSVL---GGEIEKGLNVKGFMADVTE   31 (99)
T ss_dssp             CCEEEECSCHHH---HHHHHHHHGGGTCCEEEES
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEEEEC
T ss_conf             989999579999---9999999998799999989


No 31 
>>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* (A:)
Probab=53.67  E-value=13  Score=17.91  Aligned_cols=103  Identities=14%  Similarity=0.077  Sum_probs=51.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      ||||||---|+=..   .|.+.|.+.||+|+++.=..........    ..       ...+..+-+-.+...-.+.   
T Consensus         1 MkVlVtGatG~iG~---~lv~~Ll~~g~~V~~~~~~~~~~~~~~~----~~-------~~~~~~d~~d~~~~~~~~~---   63 (311)
T 2p5y_A            1 MRVLVTGGAGFIGS---HIVEDLLARGLEVAVLDNLATGKRENVP----KG-------VPFFRVDLRDKEGVERAFR---   63 (311)
T ss_dssp             CEEEEETTTSHHHH---HHHHHHHTTTCEEEEECCCSSCCGGGSC----TT-------CCEECCCTTCHHHHHHHHH---
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCEEEEEECCCCCCHHHHH----CC-------CCEEEEECCCHHHHHHHHH---
T ss_conf             96999888788999---9999999786989999788866764513----37-------9679975558899999997---


Q ss_pred             CCCCCEEEECCCCCCC-------CC-HHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             6454199971488853-------10-2333457778998898718985
Q gi|255764489|r   81 DKKPDLILSGVNVGTN-------TS-NHVAYSGTLAAAFEGSLQGIRS  120 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N-------~g-~~v~ySGTvgAA~ea~~~Gips  120 (250)
                      ..+||.|+--.-....       .. .++...||.-....+.-.+++-
T Consensus        64 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~~l~~~~~~~~~~  111 (311)
T 2p5y_A           64 EFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEK  111 (311)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSE
T ss_pred             HCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf             423342223233566406665969888846898899999755224330


No 32 
>>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} (A:)
Probab=51.34  E-value=15  Score=17.45  Aligned_cols=139  Identities=15%  Similarity=0.114  Sum_probs=68.7

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE---CCCCCEEEEEEEEEEEEECCCHHHHHHHHHH
Q ss_conf             9268826898688569999999985489199981799856503202---2489705889711047632727999999987
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSL---TMSRNIACRTISKKRFAVHGTPVDCVVIALQ   77 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ai---t~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~   77 (250)
                      ||||||=--|+=..   .|++.|.+.|++|+++.=..+....-...   .....+       ..+.++-+-.+++.-.+.
T Consensus         1 MkVLVTGatGfiG~---~lv~~Ll~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~   70 (338)
T 1udb_A            1 MRVLVTGGSGYIGS---HTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHP-------TFVEGDIRNEALMTEILH   70 (338)
T ss_dssp             CEEEEETTTSHHHH---HHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCC-------EEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCC-------EEEEEECCCHHHHHHHHH
T ss_conf             97999898878999---99999997849899997888753656777886147887-------699801789899999874


Q ss_pred             HCCCCCCCEEEECCCCCCCCC--------HHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCC-------------CCC
Q ss_conf             504645419997148885310--------2333457778998898718985322200---1356-------------766
Q gi|255764489|r   78 KMSDKKPDLILSGVNVGTNTS--------NHVAYSGTLAAAFEGSLQGIRSFALSQA---YTYE-------------NMI  133 (250)
Q Consensus        78 ~l~~~~pDlViSGiN~G~N~g--------~~v~ySGTvgAA~ea~~~GipsIAiS~~---~~~~-------------~~~  133 (250)
                         ...+|.|+--........        ..+-.-||.-..-.+.-.+++-+-++..   +...             ...
T Consensus        71 ---~~~~d~v~~~~a~~~~~~~~~~~~~~~~~nv~~t~~ll~~a~~~~~~~~v~~Ss~~~~~~~~~~~~~~e~~~~~~~~  147 (338)
T 1udb_A           71 ---DHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQS  147 (338)
T ss_dssp             ---HTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSS
T ss_pred             ---CCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf             ---16998999898767617577699999875799999999999971987899730006872011334311378899998


Q ss_pred             CHHHHHHHHHHHHHHHHHC
Q ss_conf             1478888849999999867
Q gi|255764489|r  134 PWEVSETHAPRVLRQLLKT  152 (250)
Q Consensus       134 ~~~~a~~~~~~ii~~l~~~  152 (250)
                      .+..+...+..+++...+.
T Consensus       148 ~Y~~sK~~~E~~~~~~~~~  166 (338)
T 1udb_A          148 PYGKSKLMVEQILTDLQKA  166 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
T ss_conf             7788877546787877764


No 33 
>>1gsa_A Glutathione synthetase; ligase; HET: ADP GTT; 2.00A {Escherichia coli B} (A:1-129)
Probab=51.02  E-value=10  Score=18.51  Aligned_cols=39  Identities=10%  Similarity=-0.031  Sum_probs=27.6

Q ss_pred             CEEEEECC--CCCCCHHH--HHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             92688268--98688569--99999998548919998179985
Q gi|255764489|r    1 MRILLTND--DGIKSKGL--ITLENIARSISDDIWICAPEMDQ   39 (250)
Q Consensus         1 m~ILitND--DG~~a~gl--~~l~~~l~~~~~~v~vvAP~~~~   39 (250)
                      |||++-=|  ++++...=  -+|..++++.||+||++-|..=.
T Consensus         2 Mki~fvmDpi~~i~~~kDTT~alm~~Aq~RGh~v~~~~~~dL~   44 (129)
T 1gsa_A            2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY   44 (129)
T ss_dssp             CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGEE
T ss_pred             CEEEEEECCHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCEE
T ss_conf             3899993798886988766999999999879979998025569


No 34 
>>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix-turn-helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} (A:1-124)
Probab=48.19  E-value=19  Score=16.82  Aligned_cols=80  Identities=9%  Similarity=0.088  Sum_probs=49.9

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      |||||..||=..   .+.|.+.|++.|++|..++                                +    ..-|+..+.
T Consensus         3 ~kILiVDDd~~~---~~~l~~~L~~~g~~v~~a~--------------------------------~----~~~al~~l~   43 (124)
T 1kgs_A            3 VRVLVVEDERDL---ADLITEALKKEXFTVDVCY--------------------------------D----GEEGXYXAL   43 (124)
T ss_dssp             CEEEEECSSHHH---HHHHHHHHHHTTCEEEEES--------------------------------S----HHHHHHHHH
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEEEEC--------------------------------C----HHHHHHHHH
T ss_conf             619999299999---9999999998799999989--------------------------------9----999999997


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             645419997148885310233345777899889871898532220
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQ  125 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~  125 (250)
                      ..+||+||.-++.-.--|.+++      ..+......+|=|.+|.
T Consensus        44 ~~~~dlil~D~~mP~~~G~el~------~~~~~~~~~~pii~lt~   82 (124)
T 1kgs_A           44 NEPFDVVILDIXLPVHDGWEIL------KSXRESGVNTPVLXLTA   82 (124)
T ss_dssp             HSCCSEEEEESCCSSSCHHHHH------HHHHHTTCCCCEEEEES
T ss_pred             HCCCCEEEEECCCCCCCCCCHH------HHHHCCCCCCCEEECCC
T ss_conf             2899899994677654310101------22111345675320233


No 35 
>>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthesis, methyltransferase, transferase; 2.3A {Escherichia coli} (A:)
Probab=47.88  E-value=18  Score=16.95  Aligned_cols=33  Identities=15%  Similarity=0.056  Sum_probs=24.8

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf             926882689868856999999998548919998179
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPE   36 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~   36 (250)
                      ||||||=--|+=..   .|++.|.+.|++|.++.=.
T Consensus         1 MkVLVtGatGfiG~---~lv~~Ll~~g~~v~~~~r~   33 (345)
T 2bll_A            1 MRVLILGVNGFIGN---HLTERLLREDHYEVYGLDI   33 (345)
T ss_dssp             CEEEEETCSSHHHH---HHHHHHHHSTTCEEEEEES
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCCEEEEEEC
T ss_conf             97999898868999---9999999779988999968


No 36 
>>1dcf_A ETR1 protein; beta-alpha five sandwich; 2.50A {Arabidopsis thaliana} (A:)
Probab=47.56  E-value=20  Score=16.66  Aligned_cols=60  Identities=7%  Similarity=0.236  Sum_probs=39.1

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      |||||..|+-..   .+.+.+.|+..|++|.++.                                +    ..=|+ ..+
T Consensus         8 ~riLvVdd~~~~---~~~~~~~L~~~G~~v~~a~--------------------------------~----~~eAl-~~l   47 (136)
T 1dcf_A            8 LKVLVMDENGVS---RMVTKGLLVHLGCEVTTVS--------------------------------S----NEECL-RVV   47 (136)
T ss_dssp             CEEEEECSCHHH---HHHHHHHHHHTTCEEEEES--------------------------------S----HHHHH-HHC
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEEEEC--------------------------------C----HHHHH-HHH
T ss_conf             999999599999---9999999998799999989--------------------------------9----99999-976


Q ss_pred             CCCCCEEEECCCCCCCCCHH
Q ss_conf             64541999714888531023
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNH  100 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~  100 (250)
                      .++||+|+-.++.-.--|.+
T Consensus        48 ~~~~dliilD~~lp~~~G~e   67 (136)
T 1dcf_A           48 SHEHKVVFMDVCMPGVENYQ   67 (136)
T ss_dssp             CTTCSEEEEECCSSTTTTTH
T ss_pred             HCCCCEEEEEECCCCCCHHH
T ss_conf             43998538641379986799


No 37 
>>2b4a_A BH3024; 10175646, structural genomics, joint center for structural genomics, JCSG, protein structure initiative PSI, unknown function; 2.42A {Bacillus halodurans c-125} (A:)
Probab=46.94  E-value=21  Score=16.59  Aligned_cols=80  Identities=11%  Similarity=0.145  Sum_probs=46.5

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      |||||.-||-..   .+.+.+.|++.|++|.++. +                             |      .-|+..+.
T Consensus        16 ~rILiVdDd~~~---~~~i~~~L~~~g~~v~~a~-~-----------------------------g------~~al~~~~   56 (138)
T 2b4a_A           16 FRVTLVEDEPSH---ATLIQYHLNQLGAEVTVHP-S-----------------------------G------SAFFQHRS   56 (138)
T ss_dssp             CEEEEECSCHHH---HHHHHHHHHHTTCEEEEES-S-----------------------------H------HHHHHTGG
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEEECC-C-----------------------------H------HHHHHHHH
T ss_conf             879999699999---9999999998699897449-9-----------------------------9------99999996


Q ss_pred             C-CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             6-45419997148885310233345777899889871898532220
Q gi|255764489|r   81 D-KKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQ  125 (250)
Q Consensus        81 ~-~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~  125 (250)
                      . .+|||||.-++...--|.+++      ..+-.....+|=|-+|-
T Consensus        57 ~~~~~DliilD~~mP~~~G~el~------~~ir~~~~~~pii~lTa   96 (138)
T 2b4a_A           57 QLSTCDLLIVSDQLVDLSIFSLL------DIVKEQTKQPSVLILTT   96 (138)
T ss_dssp             GGGSCSEEEEETTCTTSCHHHHH------HHHTTSSSCCEEEEEES
T ss_pred             CCCCCCEEEEECCCCCCCHHHHH------HHHHHCCCCCCEEEEEC
T ss_conf             46999799983777788579999------99997099897899988


No 38 
>>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} (A:)
Probab=46.83  E-value=9.6  Score=18.62  Aligned_cols=81  Identities=14%  Similarity=0.094  Sum_probs=49.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      |||||..||-..   .+.+.+.|+..|++|..+.                                +    ..-|+..+.
T Consensus         4 ~rvLiVdD~~~~---~~~l~~~L~~~G~~v~~a~--------------------------------~----~~eAl~~l~   44 (127)
T 3i42_A            4 QQALIVEDYQAA---AETFKELLEMLGFQADYVM--------------------------------S----GTDALHAMS   44 (127)
T ss_dssp             EEEEEECSCHHH---HHHHHHHHHHTTEEEEEES--------------------------------S----HHHHHHHHH
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEEEEC--------------------------------C----HHHHHHHHH
T ss_conf             889999578999---9999999998799999989--------------------------------9----999999998


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH--HHHCCCCCCCCCC
Q ss_conf             645419997148885310233345777899889--8718985322200
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEG--SLQGIRSFALSQA  126 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea--~~~GipsIAiS~~  126 (250)
                      ..+||+||...+.-.=-|.+++      ..+..  ....+|=|.+|-.
T Consensus        45 ~~~~dliilD~~lP~~dG~~l~------~~ir~~~~~~~~pii~~t~~   86 (127)
T 3i42_A           45 TRGYDAVFIDLNLPDTSGLALV------KQLRALPMEKTSKFVAVSGF   86 (127)
T ss_dssp             HSCCSEEEEESBCSSSBHHHHH------HHHHHSCCSSCCEEEEEECC
T ss_pred             CCCCCEEEECCCCCCCCHHHHH------HHHHHCCCCCCCEEEEEECC
T ss_conf             0899999862789998459999------99984767899949999788


No 39 
>>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} (A:1-199,A:355-411)
Probab=46.83  E-value=16  Score=17.26  Aligned_cols=125  Identities=13%  Similarity=0.147  Sum_probs=59.9

Q ss_pred             HHHHHHHHHCCCCEEEEC--CCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHC---CCCCCCEEEECC
Q ss_conf             999999985489199981--799856503202248970588971104763272799999998750---464541999714
Q gi|255764489|r   17 ITLENIARSISDDIWICA--PEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKM---SDKKPDLILSGV   91 (250)
Q Consensus        17 ~~l~~~l~~~~~~v~vvA--P~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l---~~~~pDlViSGi   91 (250)
                      ..|.+.|.+.|.+|.+++  |-+-|--.-.+        +.+.+..+|+..|-..+--.-.+...   .+.+||++|-  
T Consensus        68 a~L~~tL~a~GAeV~~t~~Np~STqDdvaAa--------L~~~Gi~VfA~~g~t~eey~~~i~~~L~~~d~~P~iiiD--  137 (256)
T 3gvp_A           68 AVLMETLGALGAQCRWAACNIYSTLNEVAAA--------LAESGFPVFAWKGESEDDFWWCIDRCVNVEGWQPNMILD--  137 (256)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSSCCCHHHHHH--------HHHHTCCEECCTTCCHHHHHHHHHHHHCBTTBCCSEEEE--
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCHHHHHH--------HHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEC--
T ss_conf             9999999985987999437976544789999--------986695799708999789999999864258888526862--


Q ss_pred             CCCCCCCHHH------HHHHHHHH------------HHHHH-HHCCCCCCCCCCCCC---C-----CCCCHHHHHHHHHH
Q ss_conf             8885310233------34577789------------98898-718985322200135---6-----76614788888499
Q gi|255764489|r   92 NVGTNTSNHV------AYSGTLAA------------AFEGS-LQGIRSFALSQAYTY---E-----NMIPWEVSETHAPR  144 (250)
Q Consensus        92 N~G~N~g~~v------~ySGTvgA------------A~ea~-~~GipsIAiS~~~~~---~-----~~~~~~~a~~~~~~  144 (250)
                       .|..+-.-+      +.++-+|+            ||+.. -+.+|.||+-.....   +     .+..+-....|+.+
T Consensus       138 -DGgdl~~~~h~~~~~l~~~i~G~~EETTTGv~RL~am~~~g~L~fPviaVNDa~tK~~fDNra~~GHP~evMd~SFa~Q  216 (256)
T 3gvp_A          138 -DGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLSCSTVPTFVLSITATTQ  216 (256)
T ss_dssp             -SSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHCCCCHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCECCCCCCCCCCCHHHHHH
T ss_conf             -6512577765406277765201645576489999999976985642799612012103222158999821247879999


Q ss_pred             H--HHHHHHC
Q ss_conf             9--9999867
Q gi|255764489|r  145 V--LRQLLKT  152 (250)
Q Consensus       145 i--i~~l~~~  152 (250)
                      .  ..+|+++
T Consensus       217 ~la~~~l~~~  226 (256)
T 3gvp_A          217 ALALIELYNA  226 (256)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHC
T ss_conf             9999999865


No 40 
>>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} (B:152-379)
Probab=46.83  E-value=19  Score=16.78  Aligned_cols=30  Identities=13%  Similarity=0.079  Sum_probs=15.6

Q ss_pred             CEEEEE-CCCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             926882-6898688569999999985489199981
Q gi|255764489|r    1 MRILLT-NDDGIKSKGLITLENIARSISDDIWICA   34 (250)
Q Consensus         1 m~ILit-NDDG~~a~gl~~l~~~l~~~~~~v~vvA   34 (250)
                      |||+|- |+||+-    ..++++++.+|.++.|+.
T Consensus        38 ~~I~iiD~~~g~~----~s~~~~l~~~g~~~~v~~   68 (228)
T 1a9x_B           38 LPFHVVAYDFGAK----RNILRMLVDRGCRLTIVP   68 (228)
T ss_dssp             CCEEEEEEESSCC----HHHHHHHHHTTEEEEEEE
T ss_pred             CCCEEEEEECCCH----HHHHHHHHHCCCEEEEEC
T ss_conf             8727999960200----567999997798799979


No 41 
>>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Agrobacterium tumefaciens str} (A:)
Probab=45.67  E-value=11  Score=18.27  Aligned_cols=49  Identities=18%  Similarity=0.091  Sum_probs=38.4

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHC-CCCEEEECCCCCCCC--EEEEECCC
Q ss_conf             92688268986885699999999854-891999817998565--03202248
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSI-SDDIWICAPEMDQSC--LANSLTMS   49 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~-~~~v~vvAP~~~~S~--~~~ait~~   49 (250)
                      |||++-==||+..-.+....+.++.. +.+|.+++|+...--  .|..++..
T Consensus         2 MkI~ili~~g~~~~e~~~~~~~l~~a~~~~v~~is~~~~~v~~~~g~~i~~d   53 (188)
T 2fex_A            2 TRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGXPVTSXGGLKVTPD   53 (188)
T ss_dssp             CEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSSCEECTTCCEEECS
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCEEEEEEC
T ss_conf             7999997899119999999999723299099999379980673050899924


No 42 
>>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} (A:470-507)
Probab=44.49  E-value=19  Score=16.86  Aligned_cols=20  Identities=10%  Similarity=0.126  Sum_probs=16.4

Q ss_pred             HHHHHHHHHCCCCEEEECCC
Q ss_conf             99999998548919998179
Q gi|255764489|r   17 ITLENIARSISDDIWICAPE   36 (250)
Q Consensus        17 ~~l~~~l~~~~~~v~vvAP~   36 (250)
                      ..++++|+..||+|.|++|.
T Consensus        18 ~~i~~~L~~rGH~I~v~~d~   37 (38)
T 2nlz_A           18 VDIAQALVRRGHKIQVVLDE   37 (38)
T ss_dssp             HHHHHHHHHTTCEEEECCCT
T ss_pred             HHHHHHHHHCCCEEEECCCC
T ss_conf             99999999869913880578


No 43 
>>1o1x_A Ribose-5-phosphate isomerase RPIB; TM1080, structural genomics, JCSG, PSI, protein structure initiative; 1.90A {Thermotoga maritima} (A:1-141)
Probab=44.03  E-value=23  Score=16.31  Aligned_cols=37  Identities=14%  Similarity=0.167  Sum_probs=28.1

Q ss_pred             CEEEEECCCC-CCCHHHH-HHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             9268826898-6885699-99999985489199981799856
Q gi|255764489|r    1 MRILLTNDDG-IKSKGLI-TLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         1 m~ILitNDDG-~~a~gl~-~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      |||-|-+|.. ++   |+ .|++.|++.|++|.=.-|..+.|
T Consensus        13 MkI~igsDhaG~~---lK~~l~~~L~~~g~eV~D~G~~~~~~   51 (141)
T 1o1x_A           13 VKIAIASDHAAFE---LKEKVKNYLLGKGIEVEDHGTYSEES   51 (141)
T ss_dssp             CEEEEEECSTTHH---HHHHHHHHHHHTTCEEEECCCCSSSC
T ss_pred             EEEEEEECCHHHH---HHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf             4999973872799---99999999997799899779997787


No 44 
>>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* (A:1-253,A:438-454)
Probab=43.96  E-value=11  Score=18.23  Aligned_cols=98  Identities=8%  Similarity=-0.083  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHCCCCEEEECCCCCCCCEEEEEC---CCCCEEEEEEEEE----EEEECCCHHHHHHHH-------------
Q ss_conf             99999999854891999817998565032022---4897058897110----476327279999999-------------
Q gi|255764489|r   16 LITLENIARSISDDIWICAPEMDQSCLANSLT---MSRNIACRTISKK----RFAVHGTPVDCVVIA-------------   75 (250)
Q Consensus        16 l~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait---~~~~~~~~~~~~~----~~~v~GtPaDcv~~~-------------   75 (250)
                      +..|++.|.+.|++|+++....+++..-.+..   ....+........    .-.-+.-|.++..+-             
T Consensus        30 ~l~Lak~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (270)
T 3hbf_A           30 LLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDE  109 (270)
T ss_dssp             HHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999978994799980475204556531556789872766889998644343566789999999988757999999


Q ss_pred             HHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             875046454199971488853102333457778998898718985322200
Q gi|255764489|r   76 LQKMSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        76 l~~l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                      .......+||+||+-.-.+.             |..-|.-+|||++.++-.
T Consensus       110 ~~~~~~~~~~~vV~D~~~~w-------------a~~vA~~lgIP~~~f~~~  147 (270)
T 3hbf_A          110 AVAETGKNITCLVTDAFFWF-------------GADLAEEMHAKWVPLWTA  147 (270)
T ss_dssp             HHHHHCCCCCEEEEETTCTT-------------HHHHHHHTTCEEEEEECS
T ss_pred             HHHHCCCCCEEEEECCCCHH-------------HHHHHHHCCCCEEEEECC
T ss_conf             99723899539995143428-------------999999736881886246


No 45 
>>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, dimer; HET: ADP; 2.40A {Aquifex aeolicus} (A:1-139)
Probab=43.86  E-value=16  Score=17.30  Aligned_cols=79  Identities=14%  Similarity=0.143  Sum_probs=45.1

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      |||||.-||-..+.   .+.+.|+..|+.|.++.                              +|      .-|+..+-
T Consensus         1 ~~iLiVDD~~~~~~---~l~~~L~~~g~~v~~a~------------------------------~~------~~al~~l~   41 (139)
T 1ny5_A            1 MNVLVIEDDKVFRG---LLEEYLSMKGIKVESAE------------------------------RG------KEAYKLLS   41 (139)
T ss_dssp             CEEEEECCCHHHHH---HHHHHHHHHTCEEEEES------------------------------SH------HHHHHHHH
T ss_pred             CEEEEEECCHHHHH---HHHHHHHHCCCEEEEEC------------------------------CH------HHHHHHHH
T ss_conf             97999958999999---99999997799999989------------------------------99------99999986


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             64541999714888531023334577789988987189853222
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALS  124 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS  124 (250)
                      ..+||+||.-.+.-..-|.+++      .-+......+|=|.+|
T Consensus        42 ~~~~d~iilD~~lP~~~G~el~------~~~~~~~~~~pii~lt   79 (139)
T 1ny5_A           42 EKHFNVVLLDLLLPDVNGLEIL------KWIKERSPETEVIVIT   79 (139)
T ss_dssp             HSCCSEEEEESBCSSSBHHHHH------HHHHHHCTTSEEEEEE
T ss_pred             CCCCCEEEEECCCCCCCHHHHH------HHHHHCCCCCCEEEEC
T ss_conf             1899899982999998999999------9998459998189951


No 46 
>>2zkl_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, isomerase; 2.61A {Staphylococcus aureus} (A:1-130)
Probab=43.03  E-value=24  Score=16.22  Aligned_cols=37  Identities=19%  Similarity=0.209  Sum_probs=27.1

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             9268826898688569999999985489199981799856
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      ||||||=--|.=.   +.|.+.|.+.|++|.+...+..+-
T Consensus         1 MkIlVtGasGfiG---~~lv~~L~~~g~~v~~~~~~~~~~   37 (130)
T 2zkl_A            1 MNIVITGAKGFVG---KNLKADLTSTTDHHIFEVHRQTKE   37 (130)
T ss_dssp             CEEEEETTTSHHH---HHHHHHHHHHCCCEEEEECTTCCH
T ss_pred             CEEEEECCCCHHH---HHHHHHHHHCCCEEEEEECCCCCH
T ss_conf             9899999997799---999999985799499996798999


No 47 
>>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} (A:)
Probab=43.02  E-value=24  Score=16.22  Aligned_cols=37  Identities=19%  Similarity=0.264  Sum_probs=27.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             9268826898688569999999985489199981799856
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      ||||||---|+-..   .|++.|.+.||+|+++.=.....
T Consensus         5 ~~IlVtGatG~iG~---~lv~~Ll~~g~~V~~~~r~~~~~   41 (321)
T 3c1o_A            5 EKIIIYGGTGYIGK---FMVRASLSFSHPTFIYARPLTPD   41 (321)
T ss_dssp             CCEEEETTTSTTHH---HHHHHHHHTTCCEEEEECCCCTT
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCCEEEEECCCCCC
T ss_conf             68999899978999---99999996899489998888655


No 48 
>>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} (A:)
Probab=42.81  E-value=15  Score=17.52  Aligned_cols=36  Identities=19%  Similarity=0.164  Sum_probs=26.0

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             926882689868856999999998548919998179985
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQ   39 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~   39 (250)
                      ||||||=--|+=..   .|++.|.+.||+|++..-....
T Consensus         1 MkILVtGatGfiG~---~l~~~L~~~g~~v~~~~r~~~~   36 (299)
T 1n2s_A            1 MNILLFGKTGQVGW---ELQRSLAPVGNLIALDVHSKEF   36 (299)
T ss_dssp             CEEEEECTTSHHHH---HHHHHTTTTSEEEEECTTCSSS
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCEEEEECCCCCC
T ss_conf             97999899988999---9999998789999997898544


No 49 
>>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40} (A:1-65)
Probab=41.85  E-value=25  Score=16.11  Aligned_cols=54  Identities=19%  Similarity=0.360  Sum_probs=32.9

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      +|||+.-||=..   .+.+.+.|+..|++|.++ .+                                   ..-|+..+.
T Consensus        11 ~~iLiVDD~~~~---~~~~~~~L~~~G~~v~~a-~~-----------------------------------g~~al~~l~   51 (65)
T 3c97_A           11 LSVLIAEDNDIC---RLVAAKALEKCTNDITVV-TN-----------------------------------GLQALQAYQ   51 (65)
T ss_dssp             CEEEEECCCHHH---HHHHHHHHTTTCSEEEEE-SS-----------------------------------HHHHHHHHH
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEEEE-CC-----------------------------------HHHHHHHHH
T ss_conf             989999598999---999999999879999998-99-----------------------------------999999998


Q ss_pred             CCCCCEEEECCCC
Q ss_conf             6454199971488
Q gi|255764489|r   81 DKKPDLILSGVNV   93 (250)
Q Consensus        81 ~~~pDlViSGiN~   93 (250)
                      ..+||+|++-++.
T Consensus        52 ~~~~dlil~Di~M   64 (65)
T 3c97_A           52 NRQFDVIIMDIQM   64 (65)
T ss_dssp             HSCCSEEEECTTC
T ss_pred             HCCCCEEEEEECC
T ss_conf             3899889863048


No 50 
>>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} (A:1-342)
Probab=41.38  E-value=23  Score=16.29  Aligned_cols=111  Identities=12%  Similarity=-0.012  Sum_probs=53.3

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      ||||||---|+=..   .|.+.|.+.|++|.++.=................    ......+.++.+=.+.+...+.   
T Consensus         1 MkVlVTGatGfiG~---~lv~~Ll~~g~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~---   70 (342)
T 1kew_A            1 MKILITGGAGFIGS---AVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE----SNRYNFEHADICDSAEITRIFE---   70 (342)
T ss_dssp             CEEEEESTTSHHHH---HHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTT----CTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH----CCCCEEEECCCCCHHHHHHHHH---
T ss_conf             96999888877999---9999999789968999847986443777876520----6883799865789899999998---


Q ss_pred             CCCCCEEEECCCCCCC-C-------CHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             6454199971488853-1-------023334577789988987189853
Q gi|255764489|r   81 DKKPDLILSGVNVGTN-T-------SNHVAYSGTLAAAFEGSLQGIRSF  121 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N-~-------g~~v~ySGTvgAA~ea~~~GipsI  121 (250)
                      ..+||.|+--.-...- .       -.++-.-||..-.-.+.-.|++-+
T Consensus        71 ~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~  119 (342)
T 1kew_A           71 QYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG  119 (342)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             5799999989721676667759999999999999999999998645432


No 51 
>>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural genomics, PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} (C:1-117)
Probab=40.90  E-value=19  Score=16.83  Aligned_cols=36  Identities=14%  Similarity=0.188  Sum_probs=27.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             9268826898688569999999985489199981799856
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      |||+|.   |...-|. .+++.|.+.|++|+++..+.++-
T Consensus         1 Mki~Ii---G~G~iG~-~la~~L~~~g~~v~v~~~~~~~~   36 (117)
T 3l4b_C            1 MKVIII---GGETTAY-YLARSMLSRKYGVVIINKDRELC   36 (117)
T ss_dssp             CCEEEE---CCHHHHH-HHHHHHHHTTCCEEEEESCHHHH
T ss_pred             CEEEEE---CCCHHHH-HHHHHHHHCCCCEEEEECCHHHH
T ss_conf             989999---9889999-99999996899799998999999


No 52 
>>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} (A:)
Probab=39.63  E-value=27  Score=15.89  Aligned_cols=80  Identities=14%  Similarity=0.150  Sum_probs=51.4

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      +||||..||-..   ...|.+.|+..|++|.++.=                                    ..-|+..+.
T Consensus         8 ~rvLiVdD~~~~---~~~l~~~L~~~g~~v~~a~~------------------------------------~~~al~~~~   48 (137)
T 3hdg_A            8 LKILIVEDDTDA---REWLSTIISNHFPEVWSAGD------------------------------------GEEGERLFG   48 (137)
T ss_dssp             CCEEEECSCHHH---HHHHHHHHHTTCSCEEEESS------------------------------------HHHHHHHHH
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEEEECC------------------------------------HHHHHHHHH
T ss_conf             889999688999---99999999977999999899------------------------------------999999998


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             645419997148885310233345777899889871898532220
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQ  125 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~  125 (250)
                      ..+|||||.-++...--|.+++      ..+-.....+|-|-+|.
T Consensus        49 ~~~~dliilD~~lP~~dG~el~------~~ir~~~~~~piIilt~   87 (137)
T 3hdg_A           49 LHAPDVIITDIRXPKLGGLEXL------DRIKAGGAKPYVIVISA   87 (137)
T ss_dssp             HHCCSEEEECSSCSSSCHHHHH------HHHHHTTCCCEEEECCC
T ss_pred             HCCCCEEEEECCCCCCCHHHHH------HHHHHCCCCCCEEEEEC
T ss_conf             4788889982457899999999------99995098995899989


No 53 
>>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, structural genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 1li4_A* 1a7a_A* (A:1-189,A:347-408)
Probab=39.50  E-value=27  Score=15.88  Aligned_cols=126  Identities=15%  Similarity=0.178  Sum_probs=60.2

Q ss_pred             HHHHHHHHHCCCCEEEEC--CCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHH----HHHHHHHHCC-CCCCCEEEE
Q ss_conf             999999985489199981--799856503202248970588971104763272799----9999987504-645419997
Q gi|255764489|r   17 ITLENIARSISDDIWICA--PEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVD----CVVIALQKMS-DKKPDLILS   89 (250)
Q Consensus        17 ~~l~~~l~~~~~~v~vvA--P~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaD----cv~~~l~~l~-~~~pDlViS   89 (250)
                      ..|.+.|.+.|.+|.+++  |-+-|--.-.++        .+.+..+|+..|---.    |+.-+|.... +.+||++|=
T Consensus        57 a~L~~tL~a~GAeV~~t~~Np~STqDdvaAaL--------~~~Gi~VfA~~get~eey~~~i~~~L~~~~~d~~P~iiiD  128 (251)
T 3h9u_A           57 AVLIETLVELGAEVRWASCNIFSTQDHAAAAI--------AKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDGYPNMLLD  128 (251)
T ss_dssp             HHHHHHHHHTTCEEEEECSSTTTCCHHHHHHH--------HHTTCCEEECTTCCHHHHHHHHHHTTSCBTTTBCCSEEEE
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH--------HHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf             99999999769989994279764318999998--------7569458986699878999999976413268888259982


Q ss_pred             CCCCCCC---------------C-C-HHHHHHHHHH-HHHHHH-HHCCCCCCCCCCCC-------CCCCCCHHHHHHHHH
Q ss_conf             1488853---------------1-0-2333457778-998898-71898532220013-------567661478888849
Q gi|255764489|r   90 GVNVGTN---------------T-S-NHVAYSGTLA-AAFEGS-LQGIRSFALSQAYT-------YENMIPWEVSETHAP  143 (250)
Q Consensus        90 GiN~G~N---------------~-g-~~v~ySGTvg-AA~ea~-~~GipsIAiS~~~~-------~~~~~~~~~a~~~~~  143 (250)
                         .|..               + | ..-+.||-.= =||+.. -..+|.||+--...       .+.+..+-.+..++.
T Consensus       129 ---DGgdl~~~lh~~~~~l~~~i~G~~EETTTGv~RL~am~~~g~L~fPviaVNDs~tK~~fDNca~GHP~~vMd~SFa~  205 (251)
T 3h9u_A          129 ---DGGDLTNYVLDECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNCASGHPSFVMSNSFCN  205 (251)
T ss_dssp             ---SSSHHHHHHHHHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHSCCSCHHHHHHHHHH
T ss_pred             ---CCCHHHCCCCCCCCCHHHHEEEHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCCCCCCHHHEEHHHHH
T ss_conf             ---33100111234553101221320116867888887662079601367551340255553026789971522466899


Q ss_pred             HH--HHHHHHCC
Q ss_conf             99--99998677
Q gi|255764489|r  144 RV--LRQLLKTQ  153 (250)
Q Consensus       144 ~i--i~~l~~~~  153 (250)
                      +.  ..+|+++.
T Consensus       206 Q~la~~~l~~~~  217 (251)
T 3h9u_A          206 QVLAQIELWTNR  217 (251)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCC
T ss_conf             999999998667


No 54 
>>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization, X-RAY crystallography; 1.90A {Clostridium thermocellum} PDB: 3hee_A* (A:1-128)
Probab=36.94  E-value=30  Score=15.63  Aligned_cols=37  Identities=16%  Similarity=0.259  Sum_probs=28.2

Q ss_pred             CEEEEECCCC-CCCHHHH-HHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             9268826898-6885699-99999985489199981799856
Q gi|255764489|r    1 MRILLTNDDG-IKSKGLI-TLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         1 m~ILitNDDG-~~a~gl~-~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      |||-+-+|.. ++   |+ .|++.|++.||+|.=+-|.+++|
T Consensus         1 MkI~igsDhaG~~---lK~~i~~~L~~~g~eV~D~G~~~~~~   39 (128)
T 3he8_A            1 MKIGIGSDHGGYN---LKREIADFLKKRGYEVIDFGTHGNES   39 (128)
T ss_dssp             CEEEEEECGGGHH---HHHHHHHHHHHTTCEEEECCCCSSSC
T ss_pred             CEEEEEECCCHHH---HHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf             9899984774699---99999999998799889669998887


No 55 
>>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} (A:)
Probab=36.72  E-value=30  Score=15.61  Aligned_cols=38  Identities=16%  Similarity=0.148  Sum_probs=31.1

Q ss_pred             EEEECC---CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             688268---98688569999999985489199981799856
Q gi|255764489|r    3 ILLTND---DGIKSKGLITLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         3 ILitND---DG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      ||++|.   ||++.--+..-.+.++..|++|.++.|...+-
T Consensus        11 ill~~~~~~dG~~~~e~~~p~~~l~~ag~~v~~~s~~g~~~   51 (232)
T 1vhq_A           11 VILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQV   51 (232)
T ss_dssp             EECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCS
T ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf             99658988775319899999999998899899994699846


No 56 
>>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} (A:)
Probab=36.33  E-value=30  Score=15.57  Aligned_cols=34  Identities=21%  Similarity=0.206  Sum_probs=25.7

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf             9268826898688569999999985489199981799
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEM   37 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~   37 (250)
                      ||||||---|+=.   +.|++.|.+.||+|+++.=..
T Consensus        13 ~~VLItGatGfiG---~~lv~~L~~~g~~v~~~~r~~   46 (321)
T 2pk3_A           13 MRALITGVAGFVG---KYLANHLTEQNVEVFGTSRNN   46 (321)
T ss_dssp             CEEEEETTTSHHH---HHHHHHHHHTTCEEEEEESCT
T ss_pred             CEEEEECCCCHHH---HHHHHHHHHCCCEEEEEECCC
T ss_conf             5799967888899---999999997849899981887


No 57 
>>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} (A:118-254)
Probab=35.22  E-value=31  Score=15.48  Aligned_cols=81  Identities=21%  Similarity=0.199  Sum_probs=50.4

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      |||||..||-..   .+.+.+.|+..|++|..+ ..                                   ..-|+..+.
T Consensus        13 ~~iLiVdd~~~~---~~~l~~~L~~~g~~v~~a-~~-----------------------------------~~~Al~~~~   53 (137)
T 2ayx_A           13 MMILVVDDHPIN---RRLLADQLGSLGYQCKTA-ND-----------------------------------GVDALNVLS   53 (137)
T ss_dssp             CEEEEEESSHHH---HHHHHHHHHHHTSEEEEE-CC-----------------------------------SHHHHHHHH
T ss_pred             CEEEEECCCHHH---HHHHHHHHHHCCCEEEEE-CC-----------------------------------HHHHHHHHH
T ss_conf             889999198999---999999999879999997-98-----------------------------------799999986


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             6454199971488853102333457778998898718985322200
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQA  126 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~  126 (250)
                      ...||+||-..+...=-|.+      +...+......+|-|.+|..
T Consensus        54 ~~~~dliilD~~lp~~~G~~------l~~~ir~~~~~~pii~lt~~   93 (137)
T 2ayx_A           54 KNHIDIVLSDVNMPNMDGYR------LTQRIRQLGLTLPVIGVTAN   93 (137)
T ss_dssp             HSCCSEEEEEESSCSSCCHH------HHHHHHHHHCCSCEEEEESS
T ss_pred             CCCCCEEEEECCCCCCCCHH------HHHHHHHHCCCCCEEEEECC
T ss_conf             28999999807877885669------99999973899978999788


No 58 
>>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} (A:236-431)
Probab=35.02  E-value=32  Score=15.45  Aligned_cols=38  Identities=11%  Similarity=0.130  Sum_probs=29.1

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHCCC--CEEEECCCCCCC
Q ss_conf             68826898688569999999985489--199981799856
Q gi|255764489|r    3 ILLTNDDGIKSKGLITLENIARSISD--DIWICAPEMDQS   40 (250)
Q Consensus         3 ILitNDDG~~a~gl~~l~~~l~~~~~--~v~vvAP~~~~S   40 (250)
                      |.||=|||+.+.....+.+.|++.|-  ..+++.-..++.
T Consensus         3 V~lTFDDg~~~~~~~~il~~L~~~gi~atff~~~~~~~~~   42 (196)
T 2c1i_A            3 VALTFNDGPNPATTPQVLETLAKYDIKATFFVLGKNVSGN   42 (196)
T ss_dssp             EEEEEESCCCTTTHHHHHHHHHHTTCCCEEEECGGGTTTC
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHC
T ss_conf             9998718998574899999999879819999727856479


No 59 
>>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} (A:)
Probab=34.94  E-value=32  Score=15.44  Aligned_cols=40  Identities=8%  Similarity=-0.019  Sum_probs=29.7

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEE
Q ss_conf             9268826898688569999999985489199981799856503
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLA   43 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~   43 (250)
                      ||||||=-=|+-.   +.|++.|.+.||+|+...=..++....
T Consensus         3 mkiLItGatGfiG---~~l~~~L~~~g~~V~~~~r~~~~~~~~   42 (286)
T 3gpi_A            3 LSKILIAGCGDLG---LELARRLTAQGHEVTGLRRSAQPMPAG   42 (286)
T ss_dssp             CCCEEEECCSHHH---HHHHHHHHHTTCCEEEEECTTSCCCTT
T ss_pred             CCEEEEECCCHHH---HHHHHHHHHCCCEEEEEECCHHHCCCC
T ss_conf             8869998921999---999999997859899997871226067


No 60 
>>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} (A:1-146)
Probab=32.91  E-value=18  Score=17.00  Aligned_cols=78  Identities=8%  Similarity=0.058  Sum_probs=36.8

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      |||||..||=..   ...|.+.|+..| .|..++=  .    ..++.-.++..+--++.   ...+-..--+.--+....
T Consensus         3 mrVLiVDDd~~~---~~~l~~~L~~~g-~v~~a~~--g----~eal~~~~~~dliilD~---~mP~~dG~e~~~~lr~~~   69 (146)
T 1p2f_A            3 WKIAVVDDDKNI---LKKVSEKLQQLG-RVKTFLT--G----EDFLNDEEAFHVVVLDV---XLPDYSGYEICRXIKETR   69 (146)
T ss_dssp             EEEEEECSCHHH---HHHHHHHHTTTE-EEEEESS--H----HHHHHCCSCCSEEEEES---BCSSSBHHHHHHHHHHHC
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCC-EEEEECC--H----HHHHHHCCCCCEEEEEC---CCCCCCCHHHHHHHHHCC
T ss_conf             879999599999---999999998699-8999879--9----99995279999999958---998887636776545304


Q ss_pred             CCCCCEEEECC
Q ss_conf             64541999714
Q gi|255764489|r   81 DKKPDLILSGV   91 (250)
Q Consensus        81 ~~~pDlViSGi   91 (250)
                      +..|=+++|+.
T Consensus        70 ~~~pii~it~~   80 (146)
T 1p2f_A           70 PETWVILLTLL   80 (146)
T ss_dssp             TTSEEEEEESC
T ss_pred             CCCCEEEECCC
T ss_conf             55745730222


No 61 
>>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide complex; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* (A:1-184)
Probab=30.77  E-value=37  Score=15.02  Aligned_cols=37  Identities=22%  Similarity=0.180  Sum_probs=27.4

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             9268826898688569999999985489199981799856
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      ||||||=--|+-.   ..|++.|.+.|++|+++.....+-
T Consensus        21 ~~VlItGatGfiG---~~lv~~L~~~g~~v~~~~~~~~~~   57 (184)
T 2pzm_A           21 MRILITGGAGCLG---SNLIEHWLPQGHEILVIDNFATGK   57 (184)
T ss_dssp             CEEEEETTTSHHH---HHHHHHHGGGTCEEEEEECCSSSC
T ss_pred             CEEEEECCCCHHH---HHHHHHHHHCCCEEEEEECCCCCC
T ss_conf             8699988877899---999999997859899997888777


No 62 
>>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* (A:)
Probab=30.58  E-value=38  Score=15.00  Aligned_cols=38  Identities=8%  Similarity=0.154  Sum_probs=29.1

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf             92688268986885699999999854891999817998565
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSC   41 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~   41 (250)
                      ||||||---|+-..   .|.+.|.+.||+|+++.-......
T Consensus        12 ~~IlVtGatG~iG~---~l~~~L~~~g~~v~~~~r~~~~~~   49 (318)
T 2r6j_A           12 SKILIFGGTGYIGN---HMVKGSLKLGHPTYVFTRPNSSKT   49 (318)
T ss_dssp             CCEEEETTTSTTHH---HHHHHHHHTTCCEEEEECTTCSCH
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCEEEEEECCCCCCH
T ss_conf             81999899958999---999999978697999978974236


No 63 
>>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} (A:)
Probab=30.53  E-value=38  Score=14.99  Aligned_cols=101  Identities=12%  Similarity=0.013  Sum_probs=50.4

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      ||||||=--|+=.   +.|++.|.+.||+|+++.-..++......              ..-.+.+-..|...+-.. + 
T Consensus         5 ~kIlItGatG~iG---~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~-~-   65 (227)
T 3dhn_A            5 KKIVLIGASGFVG---SALLNEALNRGFEVTAVVRHPEKIKIENE--------------HLKVKKADVSSLDEVCEV-C-   65 (227)
T ss_dssp             CEEEEETCCHHHH---HHHHHHHHTTTCEEEEECSCGGGCCCCCT--------------TEEEECCCTTCHHHHHHH-H-
T ss_pred             CEEEEECCCCHHH---HHHHHHHHHCCCEEEEEECCHHHCCCCCC--------------CCCCCCCCCCCCCCCCCC-C-
T ss_conf             9999988998899---99999999784989999888365332334--------------210011222222211111-2-


Q ss_pred             CCCCCEE--EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             6454199--9714888531023334577789988987189853
Q gi|255764489|r   81 DKKPDLI--LSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSF  121 (250)
Q Consensus        81 ~~~pDlV--iSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsI  121 (250)
                       ...|.|  ....+...+.......-|+......+...+.+-+
T Consensus        66 -~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (227)
T 3dhn_A           66 -KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRF  107 (227)
T ss_dssp             -TTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEE
T ss_pred             -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCE
T ss_conf             -465311111222222222222111233211100100344423


No 64 
>>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} (A:1-183)
Probab=30.37  E-value=38  Score=14.97  Aligned_cols=111  Identities=7%  Similarity=0.020  Sum_probs=63.4

Q ss_pred             CEEEE--ECCCCCCCHHHHHHHHHHHHCCCCEEEEC--CCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHH
Q ss_conf             92688--26898688569999999985489199981--799856503202248970588971104763272799999998
Q gi|255764489|r    1 MRILL--TNDDGIKSKGLITLENIARSISDDIWICA--PEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIAL   76 (250)
Q Consensus         1 m~ILi--tNDDG~~a~gl~~l~~~l~~~~~~v~vvA--P~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l   76 (250)
                      |+||+  -.++|.-.+.=..+..+.++++.+|.++.  +..++.....+..++-. ++..+...  ...+.-.+.+.-+|
T Consensus         2 ~~ilV~~e~~~~~l~~~s~e~l~~A~~L~~~v~av~~G~~~~~~~~~~~~~~Gad-~v~~v~~~--~~~~~~~~~~a~al   78 (183)
T 1efv_A            2 QSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIA-KVLVAQHD--VYKGLLPEELTPLI   78 (183)
T ss_dssp             CEEEEECCEETTEECTHHHHHHHHHHTTTSEEEEEEEESCCHHHHHHHHHSTTCC-EEEEEECG--GGTTCCHHHHHHHH
T ss_pred             CCEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCC-EEEEECCC--HHCCCCHHHHHHHH
T ss_conf             7379999925999988999999999985897699998787079999987515987-89992583--01235778999999


Q ss_pred             HHCC-CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             7504-64541999714888531023334577789988987189853222
Q gi|255764489|r   77 QKMS-DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALS  124 (250)
Q Consensus        77 ~~l~-~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS  124 (250)
                      ..+. ...||+|+-|-.         ...+.+++.. |+..|.|-++=-
T Consensus        79 ~~~i~~~~p~~Vl~~~s---------~~g~~la~~l-A~~L~~~~vsdv  117 (183)
T 1efv_A           79 LATQKQFNYTHICAGAS---------AFGKNLLPRV-AAKLEVAPISDI  117 (183)
T ss_dssp             HHHHHHHCCSEEEEESS---------HHHHHHHHHH-HHHHTCCCEEEE
T ss_pred             HHHHHHCCCCEEEECCC---------CCHHHHHHHH-HHHHCCCCCCCE
T ss_conf             99987429989998887---------1145675899-987277610675


No 65 
>>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} (B:)
Probab=29.72  E-value=39  Score=14.91  Aligned_cols=85  Identities=9%  Similarity=0.013  Sum_probs=50.2

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHH-C
Q ss_conf             926882689868856999999998548919998179985650320224897058897110476327279999999875-0
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQK-M   79 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~-l   79 (250)
                      +||||..||-..   .+.+.+.|+..|.+++-+|.                               +..++...-... -
T Consensus         3 lriLiVdd~~~~---~~~l~~~L~~~g~~~v~~a~-------------------------------~g~eal~~~~~~~~   48 (133)
T 2r25_B            3 VKILVVEDNHVN---QEVIKRMLNLEGIENIELAC-------------------------------DGQEAFDKVKELTS   48 (133)
T ss_dssp             SCEEEECSCHHH---HHHHHHHHHHTTCCCEEEES-------------------------------SHHHHHHHHHHHHH
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEEEEEC-------------------------------CHHHHHHHHHHHHH
T ss_conf             889999698999---99999999986995999852-------------------------------33899999997652


Q ss_pred             CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHHCCCCCCCCC
Q ss_conf             46454199971488853102333457778998-89871898532220
Q gi|255764489|r   80 SDKKPDLILSGVNVGTNTSNHVAYSGTLAAAF-EGSLQGIRSFALSQ  125 (250)
Q Consensus        80 ~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~-ea~~~GipsIAiS~  125 (250)
                      ....|||||-..+...--|.++      ...+ +-.-..+|-|.+|-
T Consensus        49 ~~~~~dliilD~~lp~~dG~el------~~~ir~~~~~~~pii~lt~   89 (133)
T 2r25_B           49 KGENYNMIFMDVQMPKVDGLLS------TKMIRRDLGYTSPIVALTA   89 (133)
T ss_dssp             HTCCCSEEEECSCCSSSCHHHH------HHHHHHHSCCCSCEEEEES
T ss_pred             CCCCCEEEEEEECCCCCCHHHH------HHHHHHCCCCCCEEEEEEC
T ss_conf             2578537765332899759999------9999856899977999978


No 66 
>>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A (A:1-154)
Probab=28.83  E-value=40  Score=14.81  Aligned_cols=108  Identities=7%  Similarity=-0.099  Sum_probs=54.9

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      ||||||=--|+=..   .|.+.|.+.|+++.++.-+...+..-+................           ....+... 
T Consensus         9 ~kIlVTGa~GfIGs---~L~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-   73 (154)
T 1smk_A            9 FKVAILGAAGGIGQ---PLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFL-----------GQQQLEAA-   73 (154)
T ss_dssp             EEEEEETTTSTTHH---HHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEE-----------SHHHHHHH-
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEE-----------CCCCHHHH-
T ss_conf             86999979976999---9999997189978799962899712478786166446875596-----------78976887-


Q ss_pred             CCCCCEEEECCCCCCCCCH------HHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             6454199971488853102------333457778998898718985322
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSN------HVAYSGTLAAAFEGSLQGIRSFAL  123 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~------~v~ySGTvgAA~ea~~~GipsIAi  123 (250)
                      ...+|+++.-...-.....      ++---||.--.-.++-.+++.+-+
T Consensus        74 ~~~~d~~~~~a~~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~v~  122 (154)
T 1smk_A           74 LTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVN  122 (154)
T ss_dssp             HTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             3678189985788789996377899987767778998751346663699


No 67 
>>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} (A:1-131)
Probab=28.45  E-value=41  Score=14.77  Aligned_cols=82  Identities=21%  Similarity=0.243  Sum_probs=48.7

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      +||||..||-..   ...|.+.|+..|++|.++. .                                   ..-|+..+.
T Consensus         8 ~~ILiVdDd~~~---~~~l~~~L~~~g~~v~~a~-~-----------------------------------~~~al~~~~   48 (131)
T 1ys7_A            8 PRVLVVDDDSDV---LASLERGLRLSGFEVATAV-D-----------------------------------GAEALRSAT   48 (131)
T ss_dssp             CEEEEECSCHHH---HHHHHHHHHHTTCEEEEES-S-----------------------------------HHHHHHHHH
T ss_pred             CEEEEEECCHHH---HHHHHHHHHHCCCEEEEEC-C-----------------------------------HHHHHHHHH
T ss_conf             879999799999---9999999997899999989-9-----------------------------------999999998


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             64541999714888531023334577789988987189853222001
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQAY  127 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~~  127 (250)
                      ..+||+||--++.-.=-|.+      +-..+.......|-+.++...
T Consensus        49 ~~~~dliilD~~lp~~~g~e------~~~~ir~~~~~~~ii~~t~~~   89 (131)
T 1ys7_A           49 ENRPDAIVLDINMPVLDGVS------VVTALRAMDNDVPVCVLSARS   89 (131)
T ss_dssp             HSCCSEEEEESSCSSSCHHH------HHHHHHHTTCCCCEEEEECCC
T ss_pred             HCCCEEEEEEECCCCCCCCC------CHHHHCCCCCCCCCCCCCCCC
T ss_conf             58982999730233333222------100100145533312355789


No 68 
>>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis} (A:)
Probab=28.42  E-value=41  Score=14.77  Aligned_cols=43  Identities=9%  Similarity=-0.028  Sum_probs=36.9

Q ss_pred             CE-EEEECCCCCCCHHHHHHHHHHHHC-CCCEEEECCCCCCCCEE
Q ss_conf             92-688268986885699999999854-89199981799856503
Q gi|255764489|r    1 MR-ILLTNDDGIKSKGLITLENIARSI-SDDIWICAPEMDQSCLA   43 (250)
Q Consensus         1 m~-ILitNDDG~~a~gl~~l~~~l~~~-~~~v~vvAP~~~~S~~~   43 (250)
                      || |++--=||+.--.+..+.+.++.. +.+|.+++|+....+.+
T Consensus         3 Mkki~ill~~g~~~~e~~~~~d~l~~a~~~~v~~vs~~~~v~~~~   47 (206)
T 3f5d_A            3 LKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPIVSSIG   47 (206)
T ss_dssp             CEEEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSEEEBTT
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEE
T ss_conf             868999978996789999999998234884999996899777620


No 69 
>>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} (A:)
Probab=27.66  E-value=40  Score=14.80  Aligned_cols=81  Identities=15%  Similarity=0.166  Sum_probs=50.2

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      +||||..||-..   .+.+.+.|++.|.+|.-+|.+                               +.    -|+..+.
T Consensus         3 ~riLiVDD~~~~---~~~l~~~L~~~g~~v~~~a~~-------------------------------~~----~al~~~~   44 (120)
T 1tmy_A            3 KRVLIVDDAAFM---RMMLKDIITKAGYEVAGEATN-------------------------------GR----EAVEKYK   44 (120)
T ss_dssp             CEEEEECSCHHH---HHHHHHHHHHTTCEEEEEESS-------------------------------HH----HHHHHHH
T ss_pred             CCEEEEECCHHH---HHHHHHHHHHCCCEEEEEECC-------------------------------HH----HHHHHHH
T ss_conf             869999399999---999999999879989999889-------------------------------99----9999998


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             645419997148885310233345777899889871898532220
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQ  125 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~  125 (250)
                      ...||+||..++.-.--|.++      ...+......+|-|.+|.
T Consensus        45 ~~~~dlii~D~~lP~~~G~~l------~~~i~~~~~~~pvi~lt~   83 (120)
T 1tmy_A           45 ELKPDIVTMDITMPEMNGIDA------IKEIMKIDPNAKIIVCSA   83 (120)
T ss_dssp             HHCCSEEEEECSCGGGCHHHH------HHHHHHHCTTCCEEEEEC
T ss_pred             HCCCCEEEEECCCCCCCHHHH------HHHHHHHCCCCCEEEEEC
T ss_conf             468988998456899978999------999998688997899973


No 70 
>>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} (X:165-284)
Probab=27.36  E-value=43  Score=14.65  Aligned_cols=31  Identities=10%  Similarity=0.029  Sum_probs=20.2

Q ss_pred             CCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             9868856999999998548919998179985
Q gi|255764489|r    9 DGIKSKGLITLENIARSISDDIWICAPEMDQ   39 (250)
Q Consensus         9 DG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~   39 (250)
                      |+.++-=.+.|..++..+|-+|++++|..-+
T Consensus        14 D~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~   44 (120)
T 1js1_X           14 RPLPQAVPNSFAEWMNATDYEFVITHPEGYE   44 (120)
T ss_dssp             SCCCSHHHHHHHHHHHTSSSEEEEECCTTCC
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEECCCCCCC
T ss_conf             8530566899999987545561660476546


No 71 
>>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus} (A:)
Probab=26.11  E-value=45  Score=14.51  Aligned_cols=79  Identities=11%  Similarity=0.071  Sum_probs=45.6

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCC
Q ss_conf             26882689868856999999998548919998179985650320224897058897110476327279999999875046
Q gi|255764489|r    2 RILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMSD   81 (250)
Q Consensus         2 ~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~~   81 (250)
                      ||||..||-..+.   .+.+.|+..|++|..+.                              +|      .-|+..+..
T Consensus         3 rILiVdDd~~~~~---~l~~~L~~~G~~v~~a~------------------------------~~------~~al~~l~~   43 (119)
T 2j48_A            3 HILLLEEEDEAAT---VVCEMLTAAGFKVIWLV------------------------------DG------STALDQLDL   43 (119)
T ss_dssp             EEEEECCCHHHHH---HHHHHHHHTTCEEEEES------------------------------CH------HHHHHHHHH
T ss_pred             EEEEEECCHHHHH---HHHHHHHHCCCCEEEEC------------------------------CH------HHHHHHHHH
T ss_conf             9999987899999---99999997699769978------------------------------89------999999980


Q ss_pred             CCCCEEEECCCCCCCCCHHHHHHHHHHHHH--HHHHHCCCCCCCCC
Q ss_conf             454199971488853102333457778998--89871898532220
Q gi|255764489|r   82 KKPDLILSGVNVGTNTSNHVAYSGTLAAAF--EGSLQGIRSFALSQ  125 (250)
Q Consensus        82 ~~pDlViSGiN~G~N~g~~v~ySGTvgAA~--ea~~~GipsIAiS~  125 (250)
                      .+||+||.-++.-.=-|.+++      ..+  +.....+|=|.+|-
T Consensus        44 ~~pdlii~D~~lp~~dG~~~~------~~lr~~~~~~~~pii~~s~   83 (119)
T 2j48_A           44 LQPIVILMAWPPPDQSCLLLL------QHLREHQADPHPPLVLFLG   83 (119)
T ss_dssp             HCCSEEEEECSTTCCTHHHHH------HHHHHTCCCSSCCCEEEES
T ss_pred             CCCCEEEEEECCCCCCHHHHH------HHHHHCCCCCCCEEEEECC
T ss_conf             799879985247999779999------9998563579982999807


No 72 
>>1pch_A Phosphocarrier protein; phosphotransferase; 1.80A {Mycoplasma capricolum} (A:)
Probab=26.08  E-value=45  Score=14.51  Aligned_cols=77  Identities=18%  Similarity=0.224  Sum_probs=45.8

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             2688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    2 RILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         2 ~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      .+-|+|..|+++---..|++.++.+..+|++-.=...-.+.|  +-----|.+++-+.=...++|.=++-+.-+|..++
T Consensus         4 ~~~v~~~~GlHaRpAa~lv~~a~~~~~~I~i~~~~~~~~akS--il~il~L~~~~G~~i~i~~~G~de~~Al~~l~~~l   80 (88)
T 1pch_A            4 SAIITDKVGLHARPASVLAKEASKFSSNITIIANEKQGNLKS--IMNVMAMAIKTGTEITIQADGNDADQAIQAIKQTM   80 (88)
T ss_dssp             EEECCCTTCSCHHHHHHHHHHHTTCSSEEEEEETTEEEETTC--HHHHHHHCCCTTCEEEEEEESTTHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECHH--HHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf             999968998647389999999975898899998998980282--99998559999999999997879999999999999


No 73 
>>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} (A:)
Probab=25.24  E-value=47  Score=14.41  Aligned_cols=28  Identities=4%  Similarity=-0.155  Sum_probs=12.8

Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf             8688569999999985489199981799
Q gi|255764489|r   10 GIKSKGLITLENIARSISDDIWICAPEM   37 (250)
Q Consensus        10 G~~a~gl~~l~~~l~~~~~~v~vvAP~~   37 (250)
                      |+....+...++.++..|++|.++.|..
T Consensus        72 g~~~~el~~p~~vl~~ag~~v~~asp~g   99 (291)
T 1n57_A           72 GNHPIETLLPLYHLHAAGFEFEVATISG   99 (291)
T ss_dssp             CBCHHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf             6789999999999997898799986899


No 74 
>>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5} (A:)
Probab=25.15  E-value=47  Score=14.40  Aligned_cols=42  Identities=12%  Similarity=0.086  Sum_probs=34.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCE
Q ss_conf             926882689868856999999998548919998179985650
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCL   42 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~   42 (250)
                      |||+++.|=-+....+..+.+.++...-++.|++=+--..+.
T Consensus         6 mri~~iSDlH~~~~~~~~~~~~~~~~~~D~vv~~GDl~~~~~   47 (260)
T 2yvt_A            6 RKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEA   47 (260)
T ss_dssp             CEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHH
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             079999728999899999999876649999999566689987


No 75 
>>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} (A:)
Probab=24.75  E-value=44  Score=14.59  Aligned_cols=37  Identities=5%  Similarity=-0.139  Sum_probs=27.1

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             9268826898688569999999985489199981799856
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      ||||||=--|+-.   +.|++.|.+.||+|.++.-..++.
T Consensus        19 ~kIlItGatG~iG---~~l~~~l~~~g~~v~~~~r~~~~~   55 (242)
T 2bka_A           19 KSVFILGASGETG---RVLLKEILEQGLFSKVTLIGRRKL   55 (242)
T ss_dssp             CEEEEECTTSHHH---HHHHHHHHHHTCCSEEEEEESSCC
T ss_pred             CEEEEECCCCHHH---HHHHHHHHHCCCCCEEEEEECCHH
T ss_conf             9799989986899---999999997799726998536735


No 76 
>>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.1A {Escherichia coli} PDB: 1nn4_A (A:1-130)
Probab=24.36  E-value=49  Score=14.31  Aligned_cols=38  Identities=8%  Similarity=-0.107  Sum_probs=28.8

Q ss_pred             CEEEEECCCC-CCCHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             9268826898-688569999999985489199981799856
Q gi|255764489|r    1 MRILLTNDDG-IKSKGLITLENIARSISDDIWICAPEMDQS   40 (250)
Q Consensus         1 m~ILitNDDG-~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S   40 (250)
                      |||-+-+|.. ++-.  ..|.+.|++.||+|.=+-|..+.|
T Consensus         2 mkI~igsDhag~~lK--~~i~~~L~~~g~eV~D~G~~~~~~   40 (130)
T 2vvr_A            2 KKIAFGCDHVGFILK--HEIVAHLVERGVEVIDKGTWSSER   40 (130)
T ss_dssp             CEEEEEECTTGGGGH--HHHHHHHHHTTCEEEECCCCSSSC
T ss_pred             CEEEEEECCCHHHHH--HHHHHHHHHCCCEEEECCCCCCCC
T ss_conf             779997487079999--999999998799899659986766


No 77 
>>1m1n_A Nitrogenase molybdenum-iron protein alpha chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (A:1-55,A:299-491)
Probab=24.22  E-value=49  Score=14.29  Aligned_cols=57  Identities=21%  Similarity=0.071  Sum_probs=38.4

Q ss_pred             CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             4645419997148885310233345777899889871898532220013567661478888849999999867
Q gi|255764489|r   80 SDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQAYTYENMIPWEVSETHAPRVLRQLLKT  152 (250)
Q Consensus        80 ~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~~~~~~~~~~~~~a~~~~~~ii~~l~~~  152 (250)
                      ...+||||+||+...                .-+.-.|||.+.++.........-|+-+..++.+|.+.+...
T Consensus       170 ~~~~PDLi~g~~~ek----------------~~a~k~giP~~~~~~~d~~~py~Gy~Ga~~la~~i~~al~~p  226 (248)
T 1m1n_A          170 KRIKPDLIGSGIKEK----------------FIFQKMGIPFREMHSWDYSGPYHGFDGFAIFARDMDMTLNNP  226 (248)
T ss_dssp             HHHCCSEEEECHHHH----------------HHHHHTTCCEEESSSGGGCCCCSHHHHHHHHHHHHHHHHTCG
T ss_pred             HHCCCCEEEECCCHH----------------HHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCH
T ss_conf             853999999898407----------------999982999700776546888535866999999999997465


No 78 
>>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} (A:1-176,A:349-376)
Probab=23.97  E-value=49  Score=14.27  Aligned_cols=98  Identities=15%  Similarity=0.095  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHC-CCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHC---C-CCCCCEEEEC
Q ss_conf             99999999854-89199981799856503202248970588971104763272799999998750---4-6454199971
Q gi|255764489|r   16 LITLENIARSI-SDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKM---S-DKKPDLILSG   90 (250)
Q Consensus        16 l~~l~~~l~~~-~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l---~-~~~pDlViSG   90 (250)
                      +.-|.+++++. +.++.+|.--...+-.-+.+++.. +..... .....-+.+.+..+-..+..+   + ..+||+|+- 
T Consensus        21 laPli~~l~~~~~~e~~lv~TGqH~~~~~~~~~~~~-i~~d~~-l~~~~~~~sl~~~~~~~i~~~~~~l~~~~PD~VlV-   97 (204)
T 1v4v_A           21 XAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFG-IQEDRN-LDVXQERQALPDLAARILPQAARALKEXGADYVLV-   97 (204)
T ss_dssp             HHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTT-CCCSEE-CCCCSSCCCHHHHHHHHHHHHHHHHHHTTCSEEEE-
T ss_pred             HHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCHHCC-CCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE-
T ss_conf             999999996189998899990687456647122408-887656-78789888899999999998776654047652310-


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             48885310233345777899889871898532220
Q gi|255764489|r   91 VNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQ  125 (250)
Q Consensus        91 iN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~  125 (250)
                            .|+.   -=|+++|+-|..++||=+=+.-
T Consensus        98 ------~GDt---~~~lA~AlaA~~~~IPvaHiea  123 (204)
T 1v4v_A           98 ------HGDT---LTTFAVAWAAFLEGIPVGHVEA  123 (204)
T ss_dssp             ------ESSC---HHHHHHHHHHHHTTCCEEEETC
T ss_pred             ------CCCC---CCCHHHHHHHHHHHHHHHEECC
T ss_conf             ------1366---4311367889876344511103


No 79 
>>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} (A:)
Probab=23.83  E-value=42  Score=14.72  Aligned_cols=36  Identities=8%  Similarity=0.170  Sum_probs=26.3

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             926882689868856999999998548919998179985
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQ   39 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~   39 (250)
                      ||||||---|+-..   .|++.|.+.|++|+......+.
T Consensus         4 ~~ILVtGatGfiG~---~lv~~L~~~g~~v~~~~r~~~~   39 (321)
T 1e6u_A            4 QRVFIAGHRGMVGS---AIRRQLEQRGDVELVLRTRDEL   39 (321)
T ss_dssp             EEEEEETTTSHHHH---HHHHHHTTCTTEEEECCCTTTC
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCEEEEECCCHHC
T ss_conf             85999879988999---9999999786989996671341


No 80 
>>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} (A:)
Probab=23.58  E-value=23  Score=16.26  Aligned_cols=114  Identities=11%  Similarity=-0.027  Sum_probs=52.0

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC---CEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHH
Q ss_conf             9268826898688569999999985489199981799856---5032022489705889711047632727999999987
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQS---CLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQ   77 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S---~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~   77 (250)
                      ||||||=--|+-..   .|++.|.+.|++|.++.=.....   ............  .......+..+-+..+.+...+ 
T Consensus         1 MkIlItGatG~iG~---~lv~~Ll~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~d~~~~~~~~-   74 (337)
T 1r6d_A            1 MRLLVTGGAGFIGS---HFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD--ADPRLRFVHGDIRDAGLLAREL-   74 (337)
T ss_dssp             CEEEEETTTSHHHH---HHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT--TCTTEEEEECCTTCHHHHHHHT-
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHH--CCCCEEEEEEECCCHHHHHCCC-
T ss_conf             95999888778999---99999997799766776599986787444476665540--3787599982134635410022-


Q ss_pred             HCCCCCCCEEEECCCCCCCC---C-----HHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             50464541999714888531---0-----23334577789988987189853222
Q gi|255764489|r   78 KMSDKKPDLILSGVNVGTNT---S-----NHVAYSGTLAAAFEGSLQGIRSFALS  124 (250)
Q Consensus        78 ~l~~~~pDlViSGiN~G~N~---g-----~~v~ySGTvgAA~ea~~~GipsIAiS  124 (250)
                          ...|.|+.........   .     ..+-..||.-....+.-.|+..+-++
T Consensus        75 ----~~~~~v~~~~~~~~~~~~~~~~~~~~~~nv~~t~~~l~~~~~~~~~~~v~~  125 (337)
T 1r6d_A           75 ----RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHV  125 (337)
T ss_dssp             ----TTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ----CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             ----555358971232454433344244332149989999999997098844871


No 81 
>>1r8j_A KAIA; circadian clock protein; 2.03A {Synechococcus elongatus pcc 7942} (A:1-178)
Probab=23.45  E-value=48  Score=14.36  Aligned_cols=30  Identities=10%  Similarity=0.124  Sum_probs=18.9

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             926882689868856999999998548919998
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWIC   33 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vv   33 (250)
                      +||||..||=..   ...|.+.|+..|++|.++
T Consensus        10 ~~ILiVdDd~~~---~~~l~~~L~~~g~~V~~a   39 (178)
T 1r8j_A           10 IAICIWVESTAI---LQDCQRALSADRYQLQVC   39 (178)
T ss_dssp             EEEEEECCCHHH---HHHHHHHTCSTTEEEEEE
T ss_pred             HHHEEEECCHHH---HHHHHHHCCCCCEEEEEC
T ss_conf             523024288899---999998677885589854


No 82 
>>3ccd_A Phosphocarrier protein HPR; succinimide, isoaspartate, protein damage, autophosphatase, transferase; 1.00A {Escherichia coli} PDB: 1cm3_A 1cm2_A 1ggr_B 1hdn_A 1j6t_B 1pfh_A* 1poh_A 1vrc_C 2jel_P 3eza_B 3ezb_B 3eze_B 1opd_A (A:)
Probab=23.28  E-value=51  Score=14.18  Aligned_cols=78  Identities=13%  Similarity=0.166  Sum_probs=51.3

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCC
Q ss_conf             26882689868856999999998548919998179985650320224897058897110476327279999999875046
Q gi|255764489|r    2 RILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMSD   81 (250)
Q Consensus         2 ~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~~   81 (250)
                      ++-|.|..|+++---..|++.++.+..+|++.-=...-++.|  +-----+.+++-..=...++|-=++-+.-+|..++.
T Consensus         5 ~~~i~~~~GlHaRpAa~lv~~a~~~~~~v~i~~~~~~v~akS--il~il~L~i~~G~~i~i~~~G~de~~Al~~l~~~l~   82 (85)
T 3ccd_A            5 EVTITAPNGLDTRPAAQFVKEAKGFTSEITVTSNGKSASAKS--LFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMA   82 (85)
T ss_dssp             EEECCSTTCSCHHHHHHHHHHHTTSCSEEEEEETTEEEETTC--HHHHTTSCCCTTCEEEEEEESTTHHHHHHHHHHHHT
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECHH--HHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf             999858996637299999999985899899998998994783--999983388899999999978899999999999997


No 83 
>>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} (A:)
Probab=23.25  E-value=51  Score=14.18  Aligned_cols=106  Identities=12%  Similarity=0.105  Sum_probs=53.0

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      ||||||---|.-..   .+++.|.+.||+|+++.-...................  ........+-.-.+.+..+...  
T Consensus         5 ~~IlVtGatG~iG~---~i~~~Ll~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--   77 (308)
T 1qyc_A            5 SRILLIGATGYIGR---HVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVKN--   77 (308)
T ss_dssp             CCEEEESTTSTTHH---HHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHHT--
T ss_pred             CEEEEECCCCHHHH---HHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCC--CCCEEEECCCHHHHHHHHHHHH--
T ss_conf             98999899828999---9999999787979999889755442667777776404--8808997220102667998753--


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             6454199971488853102333457778998898718985322
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFAL  123 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAi  123 (250)
                         .+-++.       .......-||.-....+...|++.+-+
T Consensus        78 ---~~~~~~-------~~~~~~~~~~~~~~~a~~~~~v~~~v~  110 (308)
T 1qyc_A           78 ---VDVVIS-------TVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             ---CSEEEE-------CCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             ---CCEEEE-------ECCCCCCCCCHHHHHHHHHHCCEEEEE
T ss_conf             ---312221-------000122111127999999819802123


No 84 
>>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydrolase, cytoplasm, NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei 1710B} PDB: 3glq_A* (A:1-246,A:410-466)
Probab=22.85  E-value=52  Score=14.13  Aligned_cols=65  Identities=15%  Similarity=0.143  Sum_probs=34.5

Q ss_pred             HHHHHHHHHCCCCEEEEC--CCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC----CCCCCEEEE
Q ss_conf             999999985489199981--7998565032022489705889711047632727999999987504----645419997
Q gi|255764489|r   17 ITLENIARSISDDIWICA--PEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS----DKKPDLILS   89 (250)
Q Consensus        17 ~~l~~~l~~~~~~v~vvA--P~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~----~~~pDlViS   89 (250)
                      ..|.+.|++.|.+|.+++  |-+-|--.-.++        .+.+..+|+..|-.-..-.-.+...+    +..|+|+|-
T Consensus        89 A~LietL~a~GA~V~~~~cNp~STQDdvAAAL--------~~~Gi~VfAwkget~eeY~~~i~~aL~~~~~~~P~iIiD  159 (303)
T 3d64_A           89 GVLIETLKALGADVRWASCNIFSTQDHAAAAI--------VEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILD  159 (303)
T ss_dssp             HHHHHHHHHTTCEEEEECSSSSCCCHHHHHHH--------HHTTCCEECCTTCCHHHHHHHHHHTTCCSTTCCCCEEEE
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH--------HHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEC
T ss_conf             99999999769989997179865568999999--------966977997279998999999999970588999775652


No 85 
>>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, structural genomics; 2.00A {Exiguobacterium sibiricum 255-15} (A:1-104)
Probab=22.43  E-value=53  Score=14.08  Aligned_cols=71  Identities=11%  Similarity=0.024  Sum_probs=33.8

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHH--HHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEEC-C-CHHHHHHHHH
Q ss_conf             92688268986885699999999--854891999817998565032022489705889711047632-7-2799999998
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIA--RSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVH-G-TPVDCVVIAL   76 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l--~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~-G-tPaDcv~~~l   76 (250)
                      ||||||--=|-     .+|..++  ...+++| +++...+.+..-..            .++.|.+. . -|.+.  =.|
T Consensus         5 ~kVLv~g~G~~-----~al~~a~~~~~~~~~v-i~~d~~~~~~~~~~------------~d~~~~iP~~~~~~~~--~~l   64 (104)
T 2pn1_A            5 PHLLITSAGRR-----AKLVEYFVKEFKTGRV-STADCSPLASALYX------------ADQHYIVPKIDEVEYI--DHL   64 (104)
T ss_dssp             CEEEEESCTTC-----HHHHHHHHHHCCSSEE-EEEESCTTCGGGGG------------SSSEEECCCTTSTTHH--HHH
T ss_pred             CEEEECCCCHH-----HHHHHHHHHCCCCCEE-EEECCCCCCHHHHH------------CCEEEECCCCCCHHHH--HHH
T ss_conf             78999178469-----9999999976999989-99869999867884------------2867976898737799--999


Q ss_pred             HHC-CCCCCCEEEECC
Q ss_conf             750-464541999714
Q gi|255764489|r   77 QKM-SDKKPDLILSGV   91 (250)
Q Consensus        77 ~~l-~~~~pDlViSGi   91 (250)
                      ..+ ..+++|+|+.|+
T Consensus        65 ~~i~~~~~iD~vip~~   80 (104)
T 2pn1_A           65 LTLCQDEGVTALLTLI   80 (104)
T ss_dssp             HHHHHHHTCCEEEESS
T ss_pred             HHHHHHHCCCEEEECC
T ss_conf             9999985999894046


No 86 
>>1ptf_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 1.60A {Enterococcus faecalis} (A:)
Probab=22.10  E-value=54  Score=14.04  Aligned_cols=76  Identities=13%  Similarity=0.113  Sum_probs=48.6

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE--ECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHC
Q ss_conf             26882689868856999999998548919998179985650320--2248970588971104763272799999998750
Q gi|255764489|r    2 RILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANS--LTMSRNIACRTISKKRFAVHGTPVDCVVIALQKM   79 (250)
Q Consensus         2 ~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~a--it~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l   79 (250)
                      .+-|+|..|+++-=-..|++.++.+..+|++---...-++.|.-  +++    .+++-..=...++|.=++-+.-.|..+
T Consensus         5 ~~~i~~~~GlHaRpAa~lv~~a~~~~~~v~i~~~~~~~~akSil~ll~L----~~~~G~~i~i~~~G~de~~al~~l~~~   80 (88)
T 1ptf_A            5 EFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKSIMGVMSL----GVGQGSDVTITVDGADEAEGMAAIVET   80 (88)
T ss_dssp             EEECCCTTCSCHHHHHHHHHHHTTCSSEEEEEETTEEEETTCHHHHHHH----CCCTTCEEEEEEESTTHHHHHHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECHHHHHHHHC----CCCCCCEEEEEEECCCHHHHHHHHHHH
T ss_conf             9999389976462999999999768997999989999811809999865----999989999999887899999999999


Q ss_pred             CC
Q ss_conf             46
Q gi|255764489|r   80 SD   81 (250)
Q Consensus        80 ~~   81 (250)
                      +.
T Consensus        81 l~   82 (88)
T 1ptf_A           81 LQ   82 (88)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             98


No 87 
>>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} (A:532-715)
Probab=22.01  E-value=54  Score=14.03  Aligned_cols=110  Identities=11%  Similarity=-0.024  Sum_probs=61.9

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEE----EEEECCCH-HHHH--HH
Q ss_conf             26882689868856999999998548919998179985650320224897058897110----47632727-9999--99
Q gi|255764489|r    2 RILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKK----RFAVHGTP-VDCV--VI   74 (250)
Q Consensus         2 ~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~----~~~v~GtP-aDcv--~~   74 (250)
                      ||.+-==||+....+....++++..+.+|.+++|....--.+..+++.....+......    .+..-|-+ ....  .-
T Consensus         5 kV~il~~~gf~~~e~~~~~~~l~~a~~~v~~vs~~~~~v~~~~G~~i~~d~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~   84 (184)
T 1sy7_A            5 RVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRSKVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAETLSKNG   84 (184)
T ss_dssp             EEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSSCEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHHHHTCH
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCEEECCEEECCCCHHHCCEEEECCCCCCHHHHCCCH
T ss_conf             79998179968899999999999779977998467663576899877067105568852278899789964788760186


Q ss_pred             HHHHCC---CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             987504---6454199971488853102333457778998898718985322
Q gi|255764489|r   75 ALQKMS---DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFAL  123 (250)
Q Consensus        75 ~l~~l~---~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAi  123 (250)
                      .+..+.   .+.-..|.|            +.+|..--|..|.+.|.+.-.-
T Consensus        85 ~~~~~i~~~~~~g~~i~~------------ic~G~~~La~agll~g~~~t~~  124 (184)
T 1sy7_A           85 RALHWIREAFGHLKAIGA------------TGEAVDLVAKAIALPQVTVSSE  124 (184)
T ss_dssp             HHHHHHHHHHHTTCEEEE------------ETTHHHHHHHHHCCTTSCCCCS
T ss_pred             HHHHHHHHHHHCCCEEEE------------ECCHHHHHHHCCCCCCCCCCCC
T ss_conf             899999999975997999------------7863999997287678401367


No 88 
>>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A* (A:624-646,A:836-895)
Probab=21.64  E-value=16  Score=17.22  Aligned_cols=40  Identities=20%  Similarity=0.265  Sum_probs=19.6

Q ss_pred             EEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE
Q ss_conf             8826898688569999999985489199981799856503202
Q gi|255764489|r    4 LLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSL   46 (250)
Q Consensus         4 LitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ai   46 (250)
                      |++++-|-..+ +..+.+.++..|  +.|..|+-|+|...-++
T Consensus        31 LLns~~g~~~K-i~~yi~Eak~~G--I~IlpPdIN~S~~~F~v   70 (83)
T 2hpi_A           31 LLSVERHDSDK-VAEYIRDARALG--IPVLPPDVNRSGFDFKV   70 (83)
T ss_dssp             HHHHTTTCHHH-HHHHHHHHHTTT--CCEECCCTTTCCSSCEE
T ss_pred             HHHHCCCCCHH-HHHHHHHHHHHC--CCCCCCEEECCCCCEEE
T ss_conf             98744332057-899999998713--66579700023431033


No 89 
>>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D domain swapping; 2.03A {Mycobacterium tuberculosis H37RV} (A:1-101)
Probab=21.61  E-value=55  Score=13.98  Aligned_cols=79  Identities=11%  Similarity=0.108  Sum_probs=47.2

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      +||||.-||=-   -.+.+.+.|++.|++|.++.                                ++    .-|+..+.
T Consensus         5 ~~ILiVdDd~~---~~~~l~~~L~~~g~~v~~a~--------------------------------~~----~~al~~~~   45 (101)
T 2oqr_A            5 TSVLIVEDEES---LADPLAFLLRKEGFEATVVT--------------------------------DG----PAALAEFD   45 (101)
T ss_dssp             CEEEEECSCHH---HHHHHHHHHHHTTCEEEEEC--------------------------------SH----HHHHHHHH
T ss_pred             CCEEEEECCHH---HHHHHHHHHHHCCCEEEEEC--------------------------------CH----HHHHHHHH
T ss_conf             81999979999---99999999998799999989--------------------------------99----99999998


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             645419997148885310233345777899889871898532220
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQ  125 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~  125 (250)
                      ..+|||||.-++.-.=-|..++       -.=-....+|-|.+|.
T Consensus        46 ~~~~dliilD~~lP~~dG~~l~-------~~ir~~~~~pii~lt~   83 (101)
T 2oqr_A           46 RAGADIVLLDLMLPGMSGTDVC-------KQLRARSSVPVIMVTA   83 (101)
T ss_dssp             HHCCSEEEEESSCSSSCHHHHH-------HHHHHHCSCSEEEEEC
T ss_pred             HCCCCEEEEECCCCCCHHHHHH-------HHHHCCCCEEEEEEEC
T ss_conf             5366415530132210356665-------5521367558999982


No 90 
>>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi} (A:)
Probab=21.54  E-value=55  Score=13.97  Aligned_cols=33  Identities=12%  Similarity=-0.033  Sum_probs=26.4

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCC--EEEEC
Q ss_conf             2688268986885699999999854891--99981
Q gi|255764489|r    2 RILLTNDDGIKSKGLITLENIARSISDD--IWICA   34 (250)
Q Consensus         2 ~ILitNDDG~~a~gl~~l~~~l~~~~~~--v~vvA   34 (250)
                      .|+||=|||..+.+...+.+.|++.+-.  +.++.
T Consensus        27 ~V~lTfDDg~~~~~~~~il~~L~~~~i~atff~~~   61 (254)
T 2vyo_A           27 MIAINFVDGPVRGVTDRILNTLDELGVKATFSFTV   61 (254)
T ss_dssp             EEEEEEESCCCTTHHHHHHHHHHHHTCCCEEEECC
T ss_pred             EEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEC
T ss_conf             89998737998220799999999859966999964


No 91 
>>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} (A:)
Probab=21.40  E-value=56  Score=13.95  Aligned_cols=80  Identities=11%  Similarity=0.073  Sum_probs=46.0

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             92688268986885699999999854891999817998565032022489705889711047632727999999987504
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMS   80 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~   80 (250)
                      .||||..||-....   .+.+.|+..|+.|.++. +                                   ..-|+..+.
T Consensus         4 ~~VLiVdD~~~~~~---~l~~~L~~~g~~v~~a~-~-----------------------------------~~eal~~~~   44 (155)
T 1qkk_A            4 PSVFLIDDDRDLRK---AMQQTLELAGFTVSSFA-S-----------------------------------ATEALAGLS   44 (155)
T ss_dssp             CEEEEECSCHHHHH---HHHHHHHHTTCEEEEES-C-----------------------------------HHHHHHTCC
T ss_pred             CEEEEEECCHHHHH---HHHHHHHHCCCEEEEEC-C-----------------------------------HHHHHHHHH
T ss_conf             98999979999999---99999998799899978-9-----------------------------------999999854


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             645419997148885310233345777899889871898532220
Q gi|255764489|r   81 DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQ  125 (250)
Q Consensus        81 ~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~  125 (250)
                      ..+||+||.-++.-.--|.+++      ..+-.....+|=|.+|.
T Consensus        45 ~~~~dliilD~~lP~~dG~~~~------~~lr~~~~~~piI~lt~   83 (155)
T 1qkk_A           45 ADFAGIVISDIRMPGMDGLALF------RKILALDPDLPMILVTG   83 (155)
T ss_dssp             TTCCSEEEEESCCSSSCHHHHH------HHHHHHCTTSCEEEEEC
T ss_pred             CCCCCEEEECCCCCCCCHHHHH------HHHHHHCCCCCEEEEEC
T ss_conf             4799889712578999899999------99998487894898989


No 92 
>>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} (A:)
Probab=21.28  E-value=56  Score=13.94  Aligned_cols=113  Identities=8%  Similarity=-0.046  Sum_probs=63.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE-CCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHC
Q ss_conf             9268826898688569999999985489199981799856503202-248970588971104763272799999998750
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSL-TMSRNIACRTISKKRFAVHGTPVDCVVIALQKM   79 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ai-t~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l   79 (250)
                      ||||||=--|+=..   .|++.|.+.|++|.++.=.......-... ......     ......++-+-.+.....+.  
T Consensus         6 ~~VlVTGatGfIG~---~lv~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~d~~~~~~~~~--   75 (341)
T 3enk_A            6 GTILVTGGAGYIGS---HTAVELLAHGYDVVIADNLVNSKREAIARIEKITGK-----TPAFHETDVSDERALARIFD--   75 (341)
T ss_dssp             CEEEEETTTSHHHH---HHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSC-----CCEEECCCTTCHHHHHHHHH--
T ss_pred             CCEEEECCCCHHHH---HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCC-----CCEEEEEECCCHHHHHHHHH--
T ss_conf             95999748868999---999999978497999978887627778778860277-----86599913468576013343--


Q ss_pred             CCCCCCEEEECCCCCCCCC--------HHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             4645419997148885310--------23334577789988987189853222
Q gi|255764489|r   80 SDKKPDLILSGVNVGTNTS--------NHVAYSGTLAAAFEGSLQGIRSFALS  124 (250)
Q Consensus        80 ~~~~pDlViSGiN~G~N~g--------~~v~ySGTvgAA~ea~~~GipsIAiS  124 (250)
                       ..++|.++--.-.+....        ..+-.-||.-....+.-.+++-+-+|
T Consensus        76 -~~~~~~~~~~aa~~~~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~  127 (341)
T 3enk_A           76 -AHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFS  127 (341)
T ss_dssp             -HSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             -CCCCCHHHHEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
T ss_conf             -1342112111020467620148245411152120455543311222222345


No 93 
>>1sph_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 2.00A {Bacillus subtilis} (A:)
Probab=21.07  E-value=57  Score=13.91  Aligned_cols=79  Identities=13%  Similarity=0.105  Sum_probs=47.8

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCC
Q ss_conf             26882689868856999999998548919998179985650320224897058897110476327279999999875046
Q gi|255764489|r    2 RILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMSD   81 (250)
Q Consensus         2 ~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~~   81 (250)
                      ++-|+|..|+++---..|++.++.+..+|++.-=...-++.|  +.----|.+++-+.=...++|.=++-+.-.+..++.
T Consensus         5 ~~~i~~~~GlHaRpAa~lv~~a~~~~~~I~i~~~~~~~~akS--il~ll~L~~~~G~~i~i~~~G~de~~Al~~l~~~l~   82 (88)
T 1sph_A            5 TFKVTADSGIHARPATVLVQTASKYDADVNLEYNGKTVNLKD--IMGVMSLGIAKGAEITISASGADENDALNALEETMK   82 (88)
T ss_dssp             EEEBCCTTCSCHHHHHHHHHHHTTSSSEEEEEETTEEEETTC--HHHHHHHCCCTTCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCHH--HHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf             999907995547489999999976899899998999984275--999985599998999999978489999999999998


Q ss_pred             C
Q ss_conf             4
Q gi|255764489|r   82 K   82 (250)
Q Consensus        82 ~   82 (250)
                      .
T Consensus        83 ~   83 (88)
T 1sph_A           83 S   83 (88)
T ss_dssp             H
T ss_pred             H
T ss_conf             6


No 94 
>>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159} (A:)
Probab=20.97  E-value=57  Score=13.90  Aligned_cols=12  Identities=0%  Similarity=-0.249  Sum_probs=4.7

Q ss_pred             ECCCHHHHHHHH
Q ss_conf             327279999999
Q gi|255764489|r   64 VHGTPVDCVVIA   75 (250)
Q Consensus        64 v~GtPaDcv~~~   75 (250)
                      .|.-|.|+-..+
T Consensus       113 FDDG~~~~~~~~  124 (311)
T 2w3z_A          113 FDDGVDPNMTPK  124 (311)
T ss_dssp             EEEECCTTHHHH
T ss_pred             EECCCCCCCHHH
T ss_conf             727998341899


No 95 
>>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolution, signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A (A:)
Probab=20.94  E-value=57  Score=13.89  Aligned_cols=80  Identities=13%  Similarity=0.221  Sum_probs=49.7

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCC
Q ss_conf             26882689868856999999998548919998179985650320224897058897110476327279999999875046
Q gi|255764489|r    2 RILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQKMSD   81 (250)
Q Consensus         2 ~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~l~~   81 (250)
                      ||||..||=-.   ...|.+.|+..|++|..++                                |    ..-|+..+..
T Consensus         7 ~ILiVDdd~~~---~~~l~~~L~~~g~~v~~a~--------------------------------~----~~~al~~l~~   47 (127)
T 2gkg_A            7 KILIVESDTAL---SATLRSALEGRGFTVDETT--------------------------------D----GKGSVEQIRR   47 (127)
T ss_dssp             EEEEECSCHHH---HHHHHHHHHHHTCEEEEEC--------------------------------C----HHHHHHHHHH
T ss_pred             CEEEEECCHHH---HHHHHHHHHHCCCEEEEEC--------------------------------C----HHHHHHHHHH
T ss_conf             58999899999---9999999998799999986--------------------------------8----4999999981


Q ss_pred             CCCCEEEECCCCCCCC-CHHHHHHHHHHHHHH--HHHHCCCCCCCCCC
Q ss_conf             4541999714888531-023334577789988--98718985322200
Q gi|255764489|r   82 KKPDLILSGVNVGTNT-SNHVAYSGTLAAAFE--GSLQGIRSFALSQA  126 (250)
Q Consensus        82 ~~pDlViSGiN~G~N~-g~~v~ySGTvgAA~e--a~~~GipsIAiS~~  126 (250)
                      .+||+||..++.-.++ |.++.      ..+.  ..+..+|=|.+|-.
T Consensus        48 ~~~d~iilD~~lp~~~dG~~l~------~~lr~~~~~~~ipii~~s~~   89 (127)
T 2gkg_A           48 DRPDLVVLAVDLSAGQNGYLIC------GKLKKDDDLKNVPIVIIGNP   89 (127)
T ss_dssp             HCCSEEEEESBCGGGCBHHHHH------HHHHHSTTTTTSCEEEEECG
T ss_pred             CCCCEEEEEECCCCCCCHHHHH------HHHHHCCCCCCCCEEEEECC
T ss_conf             7997997430013456577999------99984777799819999789


No 96 
>>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, unknown function; HET: MSE; 2.95A {Bacillus subtilis} (A:)
Probab=20.40  E-value=28  Score=15.76  Aligned_cols=92  Identities=16%  Similarity=0.152  Sum_probs=40.5

Q ss_pred             CEEEEE---CCCCCCCHHHHHHHHHHHHCCC-CEEEECCCCCCCCEEEEECCCCCEEEEEE-------EEEEEEECCCHH
Q ss_conf             926882---6898688569999999985489-19998179985650320224897058897-------110476327279
Q gi|255764489|r    1 MRILLT---NDDGIKSKGLITLENIARSISD-DIWICAPEMDQSCLANSLTMSRNIACRTI-------SKKRFAVHGTPV   69 (250)
Q Consensus         1 m~ILit---NDDG~~a~gl~~l~~~l~~~~~-~v~vvAP~~~~S~~~~ait~~~~~~~~~~-------~~~~~~v~GtPa   69 (250)
                      |||.+-   +|.|.+.-=+++ +..+.+.+. +++++.+...-...-....  ..+....+       ....+++.-..-
T Consensus         3 ~rIa~~~~g~deg~d~~vl~A-~~~~~~~~~~~~iLvG~~~~I~~~l~~~~--~~~~~~~~~~~~~~~~~~~~a~r~~~~   79 (345)
T 1vi1_A            3 LRIAVDAXGGDHAPKAVIDGV-IKGIEAFDDLHITLVGDKTTIESHLTTTS--DRITVLHADEVIEPTDEPVRAVRRKKN   79 (345)
T ss_dssp             EEEEEESSCSSSTTHHHHHHH-HHHHHHCTTEEEEEEECHHHHHTTCCSCC--TTEEEEECCBCCCTTSCHHHHHHHCTT
T ss_pred             EEEEEECCCCCCCCHHHHHHH-HHHHHHCCCCEEEEEECHHHHHHHHHHCC--CCEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf             299998048855818899999-99998788986999948999999984370--563898587620588655789885110


Q ss_pred             HHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf             99999987504645419997148885
Q gi|255764489|r   70 DCVVIALQKMSDKKPDLILSGVNVGT   95 (250)
Q Consensus        70 Dcv~~~l~~l~~~~pDlViSGiN~G~   95 (250)
                      |+.++|+.-+...+-|.++||-|.|.
T Consensus        80 ~s~~~a~~lv~~G~aD~~vsg~~t~~  105 (345)
T 1vi1_A           80 SSXVLXAQEVAENRADACISAGNTGA  105 (345)
T ss_dssp             BHHHHHHHHHHTTSCSEEEECSCHHH
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCHH
T ss_conf             28999999863146564774467177


No 97 
>>1v7c_A Threonine synthase; PLP-dependent enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: HEY; 2.00A {Thermus thermophilus} (A:58-166)
Probab=20.33  E-value=43  Score=14.62  Aligned_cols=34  Identities=18%  Similarity=0.273  Sum_probs=18.0

Q ss_pred             EEEEEEECCCHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf             11047632727999999987504645419997148
Q gi|255764489|r   58 SKKRFAVHGTPVDCVVIALQKMSDKKPDLILSGVN   92 (250)
Q Consensus        58 ~~~~~~v~GtPaDcv~~~l~~l~~~~pDlViSGiN   92 (250)
                      +.+...+.|++-||+..+... ..+.++..++-.|
T Consensus        67 Ga~v~~~~~~~~~~~~~a~~~-~~~~~~~~~~~~n  100 (109)
T 1v7c_A           67 GARIVQVEGNFDDALRLTQKL-TEAFPVALVNSVN  100 (109)
T ss_dssp             TCEEEEEESCHHHHHHHHHHH-HHHSSCEECSTTS
T ss_pred             CCCEEECCCCCCCHHHHHHHH-HHHHHHCCCCCCC
T ss_conf             960574167542013456667-8876512233468


No 98 
>>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A* (A:)
Probab=20.32  E-value=59  Score=13.81  Aligned_cols=118  Identities=14%  Similarity=0.129  Sum_probs=48.3

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHH-HHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCHHHHHHHHHHH-
Q ss_conf             92688268986885699999999-8548919998179985650320224897058897110476327279999999875-
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIA-RSISDDIWICAPEMDQSCLANSLTMSRNIACRTISKKRFAVHGTPVDCVVIALQK-   78 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l-~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~~~~~v~GtPaDcv~~~l~~-   78 (250)
                      |||++--.+++.  -+..+.+.+ ...++++..|....+.....++....-|.....      ...+-+.+...-.+.. 
T Consensus        13 mki~~~gs~~~~--~l~~ll~~~~~~~~~~i~~v~t~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~   84 (215)
T 3da8_A           13 ARLVVLASGTGS--LLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVR------LADHPSRDAWDVAITAA   84 (215)
T ss_dssp             EEEEEEESSCCH--HHHHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHTTCCEEECC------GGGSSSHHHHHHHHHHH
T ss_pred             CEEEEEECCCCH--HHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEE------CCCCHHHHHHHHHHHHH
T ss_conf             889999837815--5999999638799977999995686667665343168646740------22101367888887765


Q ss_pred             CCCCCCCEEEECC-------------CC-CCCCCHHH--HHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             0464541999714-------------88-85310233--34577789988987189853222001
Q gi|255764489|r   79 MSDKKPDLILSGV-------------NV-GTNTSNHV--AYSGTLAAAFEGSLQGIRSFALSQAY  127 (250)
Q Consensus        79 l~~~~pDlViSGi-------------N~-G~N~g~~v--~ySGTvgAA~ea~~~GipsIAiS~~~  127 (250)
                      +....||++||--             .. ..|+=...  -|-|. .+-.-+.+.|.+.+++|.-+
T Consensus        85 l~~~~~Dl~v~~~~~~iip~~~l~~~~~~~iN~Hps~LP~yRG~-~p~~wai~~g~~~~G~TiH~  148 (215)
T 3da8_A           85 TAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGT-HGVADALAYGVKVTGATVHL  148 (215)
T ss_dssp             HHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSCTTSSCST-THHHHHHHHTCSEEEEEEEE
T ss_pred             HHHHCCCEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCCCCC-CHHHHHHHCCCCEECEEEEE
T ss_conf             54303321441141024301000012222333377764320023-20456764488275407899


No 99 
>>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* (A:1-165)
Probab=20.07  E-value=54  Score=14.01  Aligned_cols=101  Identities=12%  Similarity=0.109  Sum_probs=47.3

Q ss_pred             CEEEEECCCCC-----CCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCE-EEEEEEEEEEEEC--CCHHHHH
Q ss_conf             92688268986-----88569999999985489199981799856503202248970-5889711047632--7279999
Q gi|255764489|r    1 MRILLTNDDGI-----KSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNI-ACRTISKKRFAVH--GTPVDCV   72 (250)
Q Consensus         1 m~ILitNDDG~-----~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~-~~~~~~~~~~~v~--GtPaDcv   72 (250)
                      ||||+-.=|++     .+|=|+.|++..-  +.++++++....+.-..+.    ..+ ++.......+.-.  -+..-+-
T Consensus         1 MrILii~~~~iGD~i~~~p~l~~Lk~~~P--~a~I~~l~~~~~~~l~~~~----p~i~~v~~~~~~~~~~~~~~~~~~~~   74 (165)
T 2gt1_A            1 MRVLIVKTSSMGDVLHTLPALTDAQQAIP--GIKFDWVVEEGFAQIPSWH----AAVERVIPVAIRRWRKAWFSAPIKAE   74 (165)
T ss_dssp             CEEEEECCCCHHHHHHHHHHHHHHHHHST--TCEEEEEEEGGGTHHHHTS----TTEEEEEEECHHHHHTTTTSHHHHHH
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEECHHHHHHHHHC----CCCCEEEEECCCHHCCCCCCCHHHHH
T ss_conf             97999958984899999999999998789--9989999896489998519----98558999455000135540057899


Q ss_pred             HHHH-HHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9998-75046454199971488853102333457778998898718985
Q gi|255764489|r   73 VIAL-QKMSDKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRS  120 (250)
Q Consensus        73 ~~~l-~~l~~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~Gips  120 (250)
                      ...+ ..+...++|+||.             ..++.-+++-..+.+.+.
T Consensus        75 ~~~~~~~lr~~~~Dlvi~-------------~~~~~~~~~l~~~~~~~~  110 (165)
T 2gt1_A           75 RKAFREALQAKNYDAVID-------------AQGLVKSAALVTRLAHGV  110 (165)
T ss_dssp             HHHHHHHHHHSBCSEEEE-------------CSCCHHHHHHTGGGSBSC
T ss_pred             HHHHHHHHHCCCCCEEEE-------------CCCCCHHHHHHHHHHHHH
T ss_conf             999999971168888998-------------866411326777766523


Done!