HHSEARCH alignment of GI: 255764489 and SCOP domain: d1pn3a_

Alignment
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=95.27  E-value=0.065  Score=29.49  Aligned_cols=110  Identities=18%  Similarity=0.212  Sum_probs=55.3

Q ss_pred             CEEEEECCCCCCCHH----HHHHHHHHHHCCCCEEEECCCCCCC-----CEEEEECCCCCEEEEEEEEEEEEECCCH---
Q ss_conf             926882689868856----9999999985489199981799856-----5032022489705889711047632727---
Q gi|255764489|r    1 MRILLTNDDGIKSKG----LITLENIARSISDDIWICAPEMDQS-----CLANSLTMSRNIACRTISKKRFAVHGTP---   68 (250)
Q Consensus         1 m~ILitNDDG~~a~g----l~~l~~~l~~~~~~v~vvAP~~~~S-----~~~~ait~~~~~~~~~~~~~~~~v~GtP---   68 (250)
                      ||||++.   +-+.|    +.+|++.|.+.||+|++++|..-..     |... +.+...... ..........+..   
T Consensus         1 mril~~~---~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~g~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~   75 (391)
T d1pn3a_           1 MRVLITG---CGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPM-VPVGRAVRA-GAREPGELPPGAAEVV   75 (391)
T ss_dssp             CEEEEEE---ESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCE-EECSSCSSG-GGSCTTCCCTTCGGGH
T ss_pred             CEEEEEC---CCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEE-EECCCCHHH-HHHCHHHHHHHHHHHH
T ss_conf             9799985---8873689999999999998899899997803676898779848-987836877-7348566669999999


Q ss_pred             HHHHHHHHHHCC--CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             999999987504--645419997148885310233345777899889871898532220
Q gi|255764489|r   69 VDCVVIALQKMS--DKKPDLILSGVNVGTNTSNHVAYSGTLAAAFEGSLQGIRSFALSQ  125 (250)
Q Consensus        69 aDcv~~~l~~l~--~~~pDlViSGiN~G~N~g~~v~ySGTvgAA~ea~~~GipsIAiS~  125 (250)
                      ...+.--+..+.  -+.||+||+..          .+.....++.-+...++|.+.+..
T Consensus        76 ~~~~~~~~~~l~~~~~~~D~vi~~~----------~~~~~~~~~~~a~~~~i~~~~~~~  124 (391)
T d1pn3a_          76 TEVVAEWFDKVPAAIEGCDAVVTTG----------LLPAAVAVRSMAEKLGIPYRYTVL  124 (391)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEE----------CHHHHHHHHHHHHHHTCCEEEEES
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECC----------CCCHHHHHHHHHHHCCCCEEEEEC
T ss_conf             9999999999999730798478734----------471378999999980876488531


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]