HHsearch alignment for GI: 255764490 and conserved domain: CHL00099
>CHL00099 ilvB acetohydroxyacid synthase large subunit.
Probab=99.27 E-value=1.9e-12 Score=99.87 Aligned_cols=114 Identities=18% Similarity=0.361 Sum_probs=82.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCC-CCCCCC----------
Q ss_conf 674667674325431001123344443310256654302456765443211401110221034-344444----------
Q gi|255764490|r 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ-YAMGTS---------- 225 (364)
Q Consensus 157 ~~~vg~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lPvifvvenN~-~aist~---------- 225 (364)
T Consensus 425 ~GsmG~glPaAiGA~lA~----p~r~Vv~i~GDGsf~mt-~q-EL~Tavr~~lpv~ivV~NN~~yg~ir~~q~~~~~~~~ 498 (588)
T CHL00099 425 LGTMGYGLPAAIGAQVAH----PNEQVICISGDASFQMN-LQ-ELGTIAQYKLPIKIIIINNKWQGMVRQWQQAFYGERY 498 (588)
T ss_pred CCCCCCCHHHHHHHHHHC----CCCCEEEEECCHHHHHH-HH-HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCC
T ss_conf 755233189999999858----99818999754586321-99-9999999689958999979833699999998628876
Q ss_pred --CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
Q ss_conf --323214864357777763111121000023368875421024554546558983156
Q gi|255764490|r 226 --VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 (364)
Q Consensus 226 --~~~~~~~~~i~~ra~~~gi~~~~vDG~D~~~v~~~~~~a~~~~r~~~gP~lie~~ty 282 (364)
T Consensus 499 ~~~~~~~~~pDf~~lA~a~G~~g~rV~--~~~el~~Al~~Al~----~~gP~lIeV~vd 551 (588)
T CHL00099 499 SHSNMEEGAPDFVKLAEAFGIKGITIK--SRKDLKSKLQRALD----YDGPVLVDCQVR 551 (588)
T ss_pred CCCCCCCCCCCHHHHHHHCCCEEEEEC--CHHHHHHHHHHHHC----CCCCEEEEEEEC
T ss_conf 744576899899999997799899979--99999999999982----999789999978