HHsearch alignment for GI: 255764490 and conserved domain: COG3960

Probab=97.89  E-value=8.4e-06  Score=57.33  Aligned_cols=162  Identities=21%  Similarity=0.295  Sum_probs=112.9

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCC-------CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2222343210123443455677-------32111221236-766746676743254310011233444433102566543
Q gi|255764490|r  122 ASKIMAELTGRQGGISKGKGGS-------MHMFSTKNGFY-GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN  193 (364)
Q Consensus       122 ~~~~~ae~~gk~~g~~~Gr~gs-------~H~~~~~~~~~-~~~~~vg~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~  193 (364)
T Consensus       375 vyeemn~~fgrd~~yvstiglsqia~aqflhv~~pr~wincgqagplgwtipaalgv~~a----dp~r~vvalsgdydfq  450 (592)
T COG3960         375 VYEEMNKAFGRDVCYVTTIGLSQIAAAQFLHVFKPRHWINCGQAGPLGWTIPAALGVCAA----DPKRNVVAISGDYDFQ  450 (592)
T ss_pred             HHHHHHHHCCCCCEEEEECCHHHHHHHHHEEECCCCCEEECCCCCCCCCCCCHHHCEEEC----CCCCCEEEEECCCHHH
T ss_conf             999998651886059974157777444431104774401047667765554144312422----8887569850572078


Q ss_pred             CHHHHHHHHHHHHCCCHHHHHHHCCCCC---------CCCCCCCCCCCCCHH------------HHHHHHHHHHHHHHCC
Q ss_conf             0245676544321140111022103434---------444432321486435------------7777763111121000
Q gi|255764490|r  194 QGQVYESFNIAALWNLNVIYVIENNQYA---------MGTSVSRASAQTNFS------------KRGVSFNIPGMQVDGM  252 (364)
Q Consensus       194 eG~f~Ealn~A~~~~lPvifvvenN~~a---------ist~~~~~~~~~~i~------------~ra~~~gi~~~~vDG~  252 (364)
T Consensus       451 --fmieelavgaq~k~pyihv~vnnaylglirqaqr~f~mdy~v~laf~nin~~~~~gygvdhv~v~eglgckairv--~  526 (592)
T COG3960         451 --FLIEELAVGAQFKIPYIHVLVNNAYLGLIRQAQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRV--F  526 (592)
T ss_pred             --HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEHHCCCCEEEEE--C
T ss_conf             --789988622103685589996213789999987458953143330102688433566753001101267406881--5


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf             023368875421024554546558983156688766678
Q gi|255764490|r  253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD  291 (364)
Q Consensus       253 D~~~v~~~~~~a~~~~r~~~gP~lie~~tyR~~gHs~~D  291 (364)
T Consensus       527 ~p~e~a~af~~a~~lm~eh~vpvvve~ilervtnismgt  565 (592)
T COG3960         527 KPEDIAPAFEQAKALMAQHRVPVVVEVILERVTNISMGT  565 (592)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCC
T ss_conf             877858999999999985679756104777750100023