HHsearch alignment for GI: 255764490 and conserved domain: PRK12571

>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.
Probab=99.62  E-value=3.3e-16  Score=124.02  Aligned_cols=226  Identities=20%  Similarity=0.258  Sum_probs=140.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCHHHHHHHHHHHC-CCCCE-EEE-CCCCHHHHH
Q ss_conf             76343888999999999899999999999999789877722058--98789999999623-89989-994-300689999
Q gi|255764490|r   42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC--IGQEAVIVGMKMSL-TEGDQ-MIT-AYREHGHIL  116 (364)
Q Consensus        42 ~~~~~ls~e~l~~~yr~M~~~R~~e~~~~~l~~qg~i~g~~~~~--~GqEa~~vg~~~al-~~~D~-~~~-~yR~~~~~l  116 (364)
T Consensus        16 ~dlk~l~~~~L~~la~---~iR~l~id~v~--~~s---G--Hpg~~lG~ael~~aL~~~f~~pRDRfVlS~GH~SY~~l~   85 (642)
T PRK12571         16 ADLRALSDAELEQLAD---EIRAEVISAVS--ETG---G--HLGSSLGVVELTVALHAVFNTPRDKLVWDVGHQCYPHKL   85 (642)
T ss_pred             HHHHHCCHHHHHHHHH---HHHHHHHHHHH--HCC---C--CCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH
T ss_conf             9987299999999999---99999999997--658---9--788666799999999872499988779848568899999


Q ss_pred             HHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             97421-22223432101234434556773211122123676674667674325431001123344443310256654302
Q gi|255764490|r  117 ACGVD-ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG  195 (364)
Q Consensus       117 ~~G~~-~~~~~ae~~gk~~g~~~Gr~gs~H~~~~~~~~~~~~~~vg~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG  195 (364)
T Consensus        86 LtG~~d~lk~fRq~gs~-tGhp~~~--------et~~~~~~~G~~g~gls~AvGmA~A~~l~~~d~~v~~i~GDG~LmEG  156 (642)
T PRK12571         86 LTGRRDQFRTLRQKGGL-SGFTKRS--------ESEYDPFGAAHSSTSISAALGFAKARALGQPDGDVVAVIGDGSLTAG  156 (642)
T ss_pred             HHCCHHHHHHHHCCCCC-CCCCCCC--------CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf             86888787517606999-9978699--------88989878776535889999999999856999708999757144405


Q ss_pred             HHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCC-------CCC----------H--------H--------------
Q ss_conf             456765443211401110221034344444323214-------864----------3--------5--------------
Q gi|255764490|r  196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA-------QTN----------F--------S--------------  236 (364)
Q Consensus       196 ~f~Ealn~A~~~~lPvifvvenN~~aist~~~~~~~-------~~~----------i--------~--------------  236 (364)
T Consensus       157 vs~EA~slAGhl~~kLIvi~DDN~iSIdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (642)
T PRK12571        157 MAYEALNNAGAADRRLIVILNDNEMSIAPPVGALANYLSTLRSSDPFATLRAIAKGVEERLPGPLRDGARRARELVTGMP  236 (642)
T ss_pred             HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf             89999985140368769999438744277731788999998834408999999999986064468999999998753378


Q ss_pred             ---HHHHHHHHHHH-HHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf             ---77777631111-210000233688754210245545465589831566887666
Q gi|255764490|r  237 ---KRGVSFNIPGM-QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM  289 (364)
Q Consensus       237 ---~ra~~~gi~~~-~vDG~D~~~v~~~~~~a~~~~r~~~gP~lie~~tyR~~gHs~  289 (364)
T Consensus       237 ~~~~~~e~~g~~~~~p~dghd~~~~~~~l~~ak~~---~~~P~~i~~~t~kg~g~~~  290 (642)
T PRK12571        237 GGGTLFEELGFTYVGPIDGHDMEALLSVLRAARAR---ATGPVLVHVVTEKGKGYAP  290 (642)
T ss_pred             CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEEHHHHHCCCCH
T ss_conf             76506787387766787877899999999999972---5998575201476337753