HHsearch alignment for GI: 255764490 and conserved domain: cd00568
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin and the branched chain alpha-keto acid dehydrogenase complexes.
Probab=99.35 E-value=5.5e-13 Score=103.37 Aligned_cols=116 Identities=26% Similarity=0.383 Sum_probs=89.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCC-CCCCC--------
Q ss_conf 676674667674325431001123344443310256654302456765443211401110221034-34444--------
Q gi|255764490|r 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ-YAMGT-------- 224 (364)
Q Consensus 154 ~~~~~~vg~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lPvifvvenN~-~aist-------- 224 (364)
T Consensus 42 ~~~~g~mG~~~p~AiGa~~a~----p~~~vv~i~GDG~f~~~--~~el~ta~~~~l~i~~iv~nN~~~~~~~~~~~~~~~ 115 (168)
T cd00568 42 STGFGAMGYGLPAAIGAALAA----PDRPVVCIAGDGGFMMT--GQELATAVRYGLPVIVVVFNNGGYGTIRMHQEAFYG 115 (168)
T ss_pred CCCCCHHHHHHHHHHHHHHHC----CCCEEEEEECCCCCEEC--CHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCC
T ss_conf 898753777999999999878----99839999779742113--176645653188426999977613677999985028
Q ss_pred --CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECC
Q ss_conf --432321486435777776311112100002336887542102455454655898315
Q gi|255764490|r 225 --SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 (364)
Q Consensus 225 --~~~~~~~~~~i~~ra~~~gi~~~~vDG~D~~~v~~~~~~a~~~~r~~~gP~lie~~t 281 (364)
T Consensus 116 ~~~~~~~~~~~d~~~~a~~~G~~~~~v~~--~~el~~al~~a~----~~~~p~li~V~t 168 (168)
T cd00568 116 GRVSGTDLSNPDFAALAEAYGAKGVRVED--PEDLEAALAEAL----AAGGPALIEVKT 168 (168)
T ss_pred CCCCCCCCCCCCHHHHHHHCCCEEEEECC--HHHHHHHHHHHH----HCCCCEEEEEEC
T ss_conf 98765658888778999974986999899--999999999998----389978999989