HHsearch alignment for GI: 255764490 and conserved domain: cd03372
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE). M. jannaschii sulfopyruvate decarboxylase (ComDE) is a dodecamer of six alpha (D) subunits and six (E) beta subunits, which catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde in the coenzyme M pathway. ComDE requires TPP and divalent metal cation cofactors.
Probab=98.67 E-value=9.5e-09 Score=76.22 Aligned_cols=115 Identities=24% Similarity=0.378 Sum_probs=77.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHCCCH-HHHHHHCCC-CCCCCC
Q ss_conf 2123676674667674325431001123344443310256654--302456765443211401-110221034-344444
Q gi|255764490|r 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA--NQGQVYESFNIAALWNLN-VIYVIENNQ-YAMGTS 225 (364)
Q Consensus 150 ~~~~~~~~~~vg~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~--~eG~f~Ealn~A~~~~lP-vifvvenN~-~aist~ 225 (364)
T Consensus 35 ~~~F~~-lGtMG~~~p~aiGaa~a~p-----~kVi~i~GDGs~lM~~ge----L~Ti~~~~~~n~~~ivlnN~~~g-~~g 103 (179)
T cd03372 35 PLNFYM-LGSMGLASSIGLGLALAQP-----RKVIVIDGDGSLLMNLGA----LATIAAEKPKNLIIVVLDNGAYG-STG 103 (179)
T ss_pred CCCEEE-ECHHHHHHHHHHHHHHCCC-----CCEEEEECCHHHHHHHHH----HHHHHHHCCCCEEEEEEECCCCC-CCC
T ss_conf 776673-1344508899999986579-----968999678046543669----99999726897899998388755-413
Q ss_pred CCCC--CCCCCHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
Q ss_conf 3232--148643577777631111-210000233688754210245545465589831566
Q gi|255764490|r 226 VSRA--SAQTNFSKRGVSFNIPGM-QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 (364)
Q Consensus 226 ~~~~--~~~~~i~~ra~~~gi~~~-~vDG~D~~~v~~~~~~a~~~~r~~~gP~lie~~tyR 283 (364)
T Consensus 104 ~q~t~~~~~~Df~~iA~a~G~~~~~~v~--~~e~l~~~l~~~~------~gP~~iev~i~~ 156 (179)
T cd03372 104 NQPTHAGKKTDLEAVAKACGLDNVATVA--SEEAFEKAVEQAL------DGPSFIHVKIKP 156 (179)
T ss_pred CCCCCCCCCCCHHHHHHHCCCCEEEEEC--CHHHHHHHHHHHC------CCCEEEEEEECC
T ss_conf 5036667898999999987997399989--9999999999847------999999999879